View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19110_high_4 (Length: 267)
Name: NF19110_high_4
Description: NF19110
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19110_high_4 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 8 - 267
Target Start/End: Complemental strand, 23358538 - 23358279
Alignment:
| Q |
8 |
aaattatactcatcctttttgtacacaaaatcgacgttgaataatggaacatgtttcaatttttgtgtagcagcgaaacgaataccattgaaaggtccac |
107 |
Q |
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| T |
23358538 |
aaataatactcatcctttttgtacacaaaatcgacgttgaataatggaacatgttttaatttttgtgtagcagcgaaacgaataccattgaaaggtccac |
23358439 |
T |
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| Q |
108 |
ttctgtatatcatcgacgaaccattccttatctccgattcaggattgtcacttcttatgtagccataagtcgtttgacccgaagaagggtcatcccaatt |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23358438 |
ttctgtatatcatcgacgaaccattccttatctccgattcaggattgtcacttcttatgtagccataagtcgtttgacccgaagaagggtcatcccaatt |
23358339 |
T |
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| Q |
208 |
cttccaagctgttagttgcctattaagaccgctcgtaaggttccaaccaagcttcattcc |
267 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23358338 |
cttccaagctgttagttgcctattaagaccgctcgtaaggttccaaccaagcttcattcc |
23358279 |
T |
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