View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19111_low_17 (Length: 349)
Name: NF19111_low_17
Description: NF19111
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19111_low_17 |
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Alignment Details
Target: chr8 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 52 - 334
Target Start/End: Original strand, 38916779 - 38917061
Alignment:
| Q |
52 |
cgtaaaaacgaaagaaacgaagaatatttttattaaaaacccatagagaaagttcttcatccaagggtttatctttttaccacagagcctttgcccattc |
151 |
Q |
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| T |
38916779 |
cgtaaaaacgaaagaaacgaagaatatttttattaaaaacccatagagaaagttcttcatccaagggtttatctttttaccacagagcctttgcccattc |
38916878 |
T |
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| Q |
152 |
taaaaagcattctgtgcctttacctaactgcttgatagattccaactgcaactaaataattggtcattcaaccttctaattatgatcccattcccgttta |
251 |
Q |
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| T |
38916879 |
taaaaagcattctgtgcctttacctaactgcttgatagattccaactgcaactaaataatcggtcattcaaccttctaattatgatcccattcccgttta |
38916978 |
T |
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| Q |
252 |
tttcttatgggtcctgtcacaatttgaatttttattttattttatccttcaaggatggattcagaagcgcctaataaaaatgt |
334 |
Q |
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|||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38916979 |
tttcttctgggtgctgtcacaatttgaatttttattttattttatccttcaaggatggattcagaagcgcctaataaaaatgt |
38917061 |
T |
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