View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19111_low_18 (Length: 300)
Name: NF19111_low_18
Description: NF19111
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19111_low_18 |
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Alignment Details
Target: chr7 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 18 - 286
Target Start/End: Complemental strand, 47117626 - 47117358
Alignment:
| Q |
18 |
gttcctgagtggagcgaattgactgatagaaacaacacaaaaattagatgtttcaaaatttcatactaattttcaaaataatgtgattagtagtaaattc |
117 |
Q |
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| T |
47117626 |
gttcctgagtagagcgaattgactaatagaaacaacacaaaaattagatgtttcaaaatttcatactaattttcaaaataatgtgattagtagtaaattc |
47117527 |
T |
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| Q |
118 |
aactcgcatgaagcttaccataggtgaacgaggtctcattggtggaggttgttcttgagtactcttaactgtctaatagaatgcaacaacatcatcgaat |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47117526 |
aactcgcatgaagcttaccataggtgaacgaggtctcattggtggaggttgttcttgagtactcttaactgtctaatagaatgcaacaacatcatcgaat |
47117427 |
T |
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| Q |
218 |
tggatgaatgaacattcaacaacatatcaatataaatacaagtaagaaaggaataatagctaccacagg |
286 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
47117426 |
tggatgaatgaacattcaacaacatatcaatataaatacaagtaagaaagaaataatagctaccacagg |
47117358 |
T |
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