View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19113_high_1 (Length: 1417)
Name: NF19113_high_1
Description: NF19113
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19113_high_1 |
 | |
|
| [»] scaffold0210 (1 HSPs) |
| | |
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Alignment Details
Target: chr4 (Bit Score: 1357; Significance: 0; HSPs: 13)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 1357; E-Value: 0
Query Start/End: Original strand, 1 - 1401
Target Start/End: Original strand, 2887004 - 2888403
Alignment:
| Q |
1 |
gggagcataaaaatttctgggtaccctaaaaaacaagaaacgtttgctcgaatctctggttattgtgagcagaatgatatccattctcctcatgttactg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2887004 |
gggagcataaaaatttctgggtaccctaaaaaacaagaaacgtttgctcgaatctctggttattgtgagcagaatgatatccattctcctcatgttactg |
2887103 |
T |
|
| Q |
101 |
tctatgagtcactggtctactcggcctggcttcgtttaccagcagacgttgattcaaataccagaaaggtaagtatttaaaactcaagacactgattttt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2887104 |
tctatgagtcactggtctactcggcctggcttcgtttaccagcagacgttgattcaaataccagaaaggtaagtatttaaaactcaagacactgattttt |
2887203 |
T |
|
| Q |
201 |
ctgtttttactatttgattgattgagatatttggcatttggatcatatactaatttttcatacttttggatctgataaatggttgtagatgttcattgag |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2887204 |
ctgtttttactatttgattgattgagatatttggcatttggatcatatactaatttttcatacttttggatctgataaatggttgtagatgttcattgag |
2887303 |
T |
|
| Q |
301 |
gaagtcatggaactagtggagctcaacccattgagaaactctttggttggtttgcctggtgtgaatggtctttcaaccgaacaacgcaagaggctaacta |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2887304 |
gaagtcatggaactagtggagctcaacccattgagaaactctttggttggtttgcctggtgtgaatggtctttcaaccgaacaacgcaagaggctaacta |
2887403 |
T |
|
| Q |
401 |
ttgctgttgaattagtggccaatccatccataattttcatggatgagcctacgtctggattagatgctagagctgctgcaattgttatgcgaaccgttag |
500 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2887404 |
ttgcagttgaattagtggccaatccatccataattttcatggatgagcctacatctggattagatgctagagctgctgcaattgttatgcgaaccgttag |
2887503 |
T |
|
| Q |
501 |
gaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagcttttgatgaggtaagaaatgatttgttggta |
600 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2887504 |
gaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagcttttgatgaggtaagaaatgatttgttggta |
2887603 |
T |
|
| Q |
601 |
aaaaatgtgttttctttttcttccgcttttggactcgaaataacatacattatttattccagttattcctcatgaaacgcggaggagaagaaatatatgt |
700 |
Q |
| |
|
||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2887604 |
aaaaatgcgttttctttttcttcctcttttggactcgaaataacatacattatatattccagttattcctcatgaaacgcggaggagaagaaatatatgt |
2887703 |
T |
|
| Q |
701 |
tggaccgctgggtcgtcattctagtcaattgatcaagtattttgaggttggatgcaacttatatttaatattacttttagacaaaataaataaattatag |
800 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2887704 |
tggaccgctgggtcgtcattctagtcaattgatcaagtattttgaggttggatgcaacttatatttaatattacttttagacaaaataaataaattatag |
2887803 |
T |
|
| Q |
801 |
tggatagctataattctacttggaagattatcttctaatattttctgttgtttagagcattgaaggggttagtaaaatcaaagatggctataatccagca |
900 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2887804 |
tggatagctataattctacttggaagattatcttctaatattttctgttgtttagagcattgaaggggttagtaaaatcaaagatggctataatccagca |
2887903 |
T |
|
| Q |
901 |
acttggatgttggaagtttcgagttcagcacaagaacttactttaggaattgattttcatcatgcatacaaaaattctgagttgtacaggtaagaaaatt |
1000 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
2887904 |
acttggatgttggaagtttcgagttcagcacaagaacttactctaggaattgattttcatcatgcatacaaaaattctgagttgtacaggtaagcaaatt |
2888003 |
T |
|
| Q |
1001 |
tatttgaaaatatggattaataattatagtaccaactatgatcatattggaaaaagacctcactgttataaactattgttcaggagaaacaagcaactta |
1100 |
Q |
| |
|
|||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2888004 |
tatttgaaaatatggattcataatt-tagtaccaactatgatcatattggaaaaagacctcactgttataaactattgttcaggagaaacaagcaactta |
2888102 |
T |
|
| Q |
1101 |
tagaagaattaggcaaacctgcacctggttcaaatgatctttatttctctgcccaatactcacaatcatttttagtccaatgtttggcttgcttatggaa |
1200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2888103 |
tagaagaattaggcaaacctgcacctggttcaaatgatctttatttctctgcccaatactcacaatcatttttagtccaatgtttggcttgcttatggaa |
2888202 |
T |
|
| Q |
1201 |
acaacattggtcatattggcgcaacccgccatacacttctgtgaggtttttcttcactgttttcataggcttgatgtttggaacaatattttgggatctt |
1300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2888203 |
acaacattggtcatattggcgcaacccgccatacacttctgtgaggtttttcttcactgttttcataggcttgatgtttggaacaatattttgggatctt |
2888302 |
T |
|
| Q |
1301 |
ggaaggaaatagtaagtgaactttcattatctgaaaaataagaactaaactattagagttaagtcagcttttctttccaactcaagttctaacctctttt |
1400 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
2888303 |
ggaaggaaatagtaagtgaactttcattatctgaaaaataagaactaaactattagagttaagtcagcttttctttccaactcgagttctaacctctttt |
2888402 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 513; E-Value: 0
Query Start/End: Original strand, 6 - 994
Target Start/End: Complemental strand, 2897367 - 2896357
Alignment:
| Q |
6 |
cataaaaatttctgggtaccctaaaaaacaagaaacgtttgctcgaatctctggttattgtgagcagaatgatatccattctcctcatgttactgtctat |
105 |
Q |
| |
|
|||||||||||| || |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2897367 |
cataaaaatttcaggctaccttaaaagacaagaaacgtttgctcgaatctctggttattgtgagcagaatgatatccattctcctcatgttactgtctat |
2897268 |
T |
|
| Q |
106 |
gagtcactggtctactcggcctggcttcgtttaccagcagacgttgattcaaataccagaaaggtaagtatttaaaactcaagacact----gatttttc |
201 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||| |||||||||| ||||||||||| |||||||| |
|
|
| T |
2897267 |
gagtcaatggtctactcggcctggcttcgtttaccagcagaagttgattccaattccagaaaggttagtatttaaagctcaagacactttgtgatttttc |
2897168 |
T |
|
| Q |
202 |
tgttttt-actat-ttgattgattgagatatt----------------tggcatttggatcatatactaatttttcatacttttggatctgataaatggt |
283 |
Q |
| |
|
||||||| |||| || ||||||| ||||||| ||| ||| ||| |||| |||| || |||||||||| | |||||||||||||| |
|
|
| T |
2897167 |
tgttttttactagattcattgatttagatattcattcattgagacatctggaattcggaacatagactatttgttcatactttggaatctgataaatggt |
2897068 |
T |
|
| Q |
284 |
tgtagatgttcattgaggaagtcatggaactagtggagctcaacccattgagaaactctttggttggtttgcctggtgtgaatggtctttcaaccgaaca |
383 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |
|
|
| T |
2897067 |
tgtagatgttcatcgaggaagtcatggaactagtggagctcaatccattgagaaactctttggttggtttgcctggtgtgaatggcctttcaactgaaca |
2896968 |
T |
|
| Q |
384 |
acgcaagaggctaactattgctgttgaattagtggccaatccatccataattttcatggatgagcctacgtctggattagatgctagagctgctgcaatt |
483 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
2896967 |
acgcaagaggctaactattgcagttgaattagtggccaatccatccataattttcatggatgagcctacatctggattagatgctagagctgctgcaatt |
2896868 |
T |
|
| Q |
484 |
gttatgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagcttttgatgaggtaa |
583 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2896867 |
gttatgcgaacagttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagcttttgatgaggtaa |
2896768 |
T |
|
| Q |
584 |
gaaatgatttgttggtaaaaaat-gtgttttctttttcttccgcttttggactcgaa-----ataacatacattatttattccagttattcctcatgaaa |
677 |
Q |
| |
|
||||||||| ||| |||||||| |||||| | ||||||| || || ||| ||| ||| ||| || |||| || ||||| |||| ||||| |
|
|
| T |
2896767 |
gaaatgatt--ttgataaaaaatcatgttttatgattcttccttttctgtacttgaactgacctaatataaatgatttcttttagttactcctaatgaag |
2896670 |
T |
|
| Q |
678 |
cgcggaggagaagaaatatatgttggaccgctgggtcgtcattctagtcaattgatcaagtattttgaggttggatgcaacttatatttaatattacttt |
777 |
Q |
| |
|
||||||||| |||||| ||||||||| || ||||||||||||| | |||||||||||||||||||||||||||||| || | ||| |||||| ||| |
|
|
| T |
2896669 |
cgcggaggacaagaaacatatgttgggccattgggtcgtcattccaatcaattgatcaagtattttgaggttggatgaaaagtgcattcaatattgtttt |
2896570 |
T |
|
| Q |
778 |
tagacaaaataaataaattatagtggatagctataattctacttggaagattatcttctaatattttctgttg-tttagagcattgaaggggttagtaaa |
876 |
Q |
| |
|
||| | || | |||| ||| |||| | |||||||| |||| || | || | |||||||||||||||| |||||||||| ||||||||||||||| |
|
|
| T |
2896569 |
tagtctgaa-----atattaaagttgataaccataattcttgttggtagctaatatgctaatattttctgttgttttagagcatcgaaggggttagtaaa |
2896475 |
T |
|
| Q |
877 |
atcaaagatggctataatccagcaacttggatgttggaagtttcgagttcagcacaagaacttactttaggaattgattttcatcatgcatacaaaaatt |
976 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| ||||||||| ||||||||||| || ||||||||||| |
|
|
| T |
2896474 |
attaaagatggctataatccagcaacttggatgttggaagttacaagttcagcacaagaacatactttaggtgttgattttcatgatatatacaaaaatt |
2896375 |
T |
|
| Q |
977 |
ctgagttgtacaggtaag |
994 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
2896374 |
ctgagttgtacaggtaag |
2896357 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 261 - 588
Target Start/End: Original strand, 2877741 - 2878068
Alignment:
| Q |
261 |
tacttttggatctgataaatggttgtagatgttcattgaggaagtcatggaactagtggagctcaacccattgagaaactctttggttggtttgcctggt |
360 |
Q |
| |
|
|||||||| |||| | |||| ||||||||||||||||||||||| ||||||||||| ||||| || || |||| ||||| | ||||||||||||||| |
|
|
| T |
2877741 |
tacttttgaatctaacaaatatttgtagatgttcattgaggaagttatggaactagtcgagctgaatccgctgaggaactcactagttggtttgcctggt |
2877840 |
T |
|
| Q |
361 |
gtgaatggtctttcaaccgaacaacgcaagaggctaactattgctgttgaattagtggccaatccatccataattttcatggatgagcctacgtctggat |
460 |
Q |
| |
|
|||| ||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||| |||||||| ||||||| |
|
|
| T |
2877841 |
gtgagcggtctttcaaccgaacaacgcaagaggttaactatttcagttgaattagtggccaatccatccataattttcatggacgagcctacatctggat |
2877940 |
T |
|
| Q |
461 |
tagatgctagagctgctgcaattgttatgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacat |
560 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |
|
|
| T |
2877941 |
tagatgctagagctgctgcaattgttatgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgtaccattcatcaaccaagtatcgacat |
2878040 |
T |
|
| Q |
561 |
attcgaagcttttgatgaggtaagaaat |
588 |
Q |
| |
|
||| ||| |||||||||||||||||||| |
|
|
| T |
2878041 |
atttgaatcttttgatgaggtaagaaat |
2878068 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 172; E-Value: 9e-92
Query Start/End: Original strand, 1061 - 1344
Target Start/End: Complemental strand, 2896304 - 2896021
Alignment:
| Q |
1061 |
cactgttataaactattgttcaggagaaacaagcaacttatagaagaattaggcaaacctgcacctggttcaaatgatctttatttctctgcccaatact |
1160 |
Q |
| |
|
||||| ||||||||||| || |||||||||||||||||||||| |||||||||||||||||| |||||||| || |||||| ||||||| |||||||||| |
|
|
| T |
2896304 |
cactgatataaactattctttaggagaaacaagcaacttatagtagaattaggcaaacctgctcctggttctaaggatcttcatttctccgcccaatact |
2896205 |
T |
|
| Q |
1161 |
cacaatcatttttagtccaatgtttggcttgcttatggaaacaacattggtcatattggcgcaacccgccatacacttctgtgaggtttttcttcactgt |
1260 |
Q |
| |
|
|||||||||||| ||||||| ||||||||| |||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||| |
|
|
| T |
2896204 |
cacaatcattttggatccaatgcttggcttgcctatggaaacaacattggtcatactggcgcaatccgccatacactgctgtgaggtttttcttcactac |
2896105 |
T |
|
| Q |
1261 |
tttcataggcttgatgtttggaacaatattttgggatcttggaaggaaatagtaagtgaactttcattatctgaaaaataagaa |
1344 |
Q |
| |
|
|||||||| ||||||||||||||||| || ||| | ||||||||||||||||||||||| |||||||| ||||||||||||| |
|
|
| T |
2896104 |
tttcatagcattgatgtttggaacaatgttctggaaccttggaaggaaatagtaagtgaaacttcattatgtgaaaaataagaa |
2896021 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 135; E-Value: 1e-69
Query Start/End: Original strand, 1062 - 1320
Target Start/End: Original strand, 2878562 - 2878820
Alignment:
| Q |
1062 |
actgttataaactattgttcaggagaaacaagcaacttatagaagaattaggcaaacctgcacctggttcaaatgatctttatttctctgcccaatactc |
1161 |
Q |
| |
|
||||||||| |||||||||||||||||| |||||||||||||||||||| || |||||||| | |||||| || |||||||||||| || ||||||||| |
|
|
| T |
2878562 |
actgttatacactattgttcaggagaaataagcaacttatagaagaattgggaaaacctgctcttggttccaaggatctttatttccctagccaatactc |
2878661 |
T |
|
| Q |
1162 |
acaatcatttttagtccaatgtttggcttgcttatggaaacaacattggtcatattggcgcaacccgccatacacttctgtgaggtttttcttcactgtt |
1261 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||| |||||||||| |||||||||||||||||||||| ||||||| |||| ||||||| ||| || | |
|
|
| T |
2878662 |
acaatcatttttagttcaatgcttggcttgcttgtggaaacaacgttggtcatattggcgcaacccgttatacactgctgttaggttttactttgctact |
2878761 |
T |
|
| Q |
1262 |
ttcataggcttgatgtttggaacaatattttgggatcttggaaggaaatagtaagtgaa |
1320 |
Q |
| |
|
||||||| ||||||||||||||||| |||||||| || ||| | |||||||||||||| |
|
|
| T |
2878762 |
ttcatagcattgatgtttggaacaatgttttgggacctcggacgcaaatagtaagtgaa |
2878820 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 99; E-Value: 3e-48
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 2877237 - 2877415
Alignment:
| Q |
1 |
gggagcataaaaatttctgggtaccctaaaaaacaagaaacgtttgctcgaatctctggttattgtgagcagaatgatatccattctcctcatgttactg |
100 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| |||||||| |||||| |||||||||| ||||||||||||||||||||||| || ||||| ||||||| |
|
|
| T |
2877237 |
gggagcataaaaatttctggttaccctaaaaagcaagaaacatttgctagaatctctggctattgtgagcagaatgatatccactcccctcaagttactg |
2877336 |
T |
|
| Q |
101 |
tctatgagtcactggtctactcggcctggcttcgtttaccagcagacgttgattcaaataccagaaaggtaagtattta |
179 |
Q |
| |
|
|||||||||| | | || || || |||||||||||||| ||||| |||||||| |||||||||||||| |||||||| |
|
|
| T |
2877337 |
tctatgagtccttactgtattcagcttggcttcgtttaccggcagaagttgattccaataccagaaaggttagtattta |
2877415 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 833 - 997
Target Start/End: Original strand, 2878314 - 2878478
Alignment:
| Q |
833 |
ttctaatattttctgttgtttagagcattgaaggggttagtaaaatcaaagatggctataatccagcaacttggatgttggaagtttcgagttcagcaca |
932 |
Q |
| |
|
|||| ||||||||| |||| ||||| |||||||| || |||||||| || ||||| ||||| |||||||| |||||||| ||||| ||||| ||||||| |
|
|
| T |
2878314 |
ttcttatattttctattgtctagagtattgaaggagtaagtaaaataaacgatggatataacccagcaacatggatgttagaagtgacgagtccagcaca |
2878413 |
T |
|
| Q |
933 |
agaacttactttaggaattgattttcatcatgcatacaaaaattctgagttgtacaggtaagaaa |
997 |
Q |
| |
|
|||| || | ||||| |||||||||| | |||||||||||||||| | || |||||||||| |
|
|
| T |
2878414 |
agaagttgcattaggtgctgattttcatgagatatacaaaaattctgagctatataggtaagaaa |
2878478 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 463 - 580
Target Start/End: Complemental strand, 53668666 - 53668549
Alignment:
| Q |
463 |
gatgctagagctgctgcaattgttatgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatat |
562 |
Q |
| |
|
||||||||||| ||||| ||||| |||||||| || || ||||| || |||||| | ||||| ||||| ||||| ||||| |||||||| ||||| || | |
|
|
| T |
53668666 |
gatgctagagccgctgctattgtgatgcgaactgtgagaaacacagtagacacatggagaacggttgtgtgcacaattcaccaaccaagcattgatattt |
53668567 |
T |
|
| Q |
563 |
tcgaagcttttgatgagg |
580 |
Q |
| |
|
| ||||||||||||||| |
|
|
| T |
53668566 |
tttaagcttttgatgagg |
53668549 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 689 - 753
Target Start/End: Original strand, 2878176 - 2878240
Alignment:
| Q |
689 |
agaaatatatgttggaccgctgggtcgtcattctagtcaattgatcaagtattttgaggttggat |
753 |
Q |
| |
|
||||||||||| ||| || | |||||| |||||| ||||||||||||||| ||||||||||||| |
|
|
| T |
2878176 |
agaaatatatgctgggccattaggtcgttattctaatcaattgatcaagtactttgaggttggat |
2878240 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 463 - 579
Target Start/End: Original strand, 35420893 - 35421009
Alignment:
| Q |
463 |
gatgctagagctgctgcaattgttatgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatat |
562 |
Q |
| |
|
|||||||||| ||||| ||||| ||||||| || || ||||| || |||||||| ||||| ||| | ||||| ||||| |||||||| ||||| || | |
|
|
| T |
35420893 |
gatgctagagtcgctgctattgtgatgcgaaatgtgagaaacacagtagacacagggagaactgttctgtgcacaattcaccaaccaagcattgatattt |
35420992 |
T |
|
| Q |
563 |
tcgaagcttttgatgag |
579 |
Q |
| |
|
| |||||||||||||| |
|
|
| T |
35420993 |
tttaagcttttgatgag |
35421009 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 503
Target Start/End: Original strand, 46452166 - 46452304
Alignment:
| Q |
365 |
atggtctttcaaccgaacaacgcaagaggctaactattgctgttgaattagtggccaatccatccataattttcatggatgagcctacgtctggattaga |
464 |
Q |
| |
|
||||||| ||||| |||||||| || ||| | ||||| || || ||| |||| ||||| || || || | |||||||||||||| ||||| ||||| || |
|
|
| T |
46452166 |
atggtctgtcaacagaacaacgaaaaaggttgactatagcagtggaactagttgccaacccttctatggtcttcatggatgagcccacgtccggattgga |
46452265 |
T |
|
| Q |
465 |
tgctagagctgctgcaattgttatgcgaaccgttaggaa |
503 |
Q |
| |
|
|||||| ||||| || ||||| ||| |||| || ||||| |
|
|
| T |
46452266 |
tgctagggctgcagccattgtgatgagaactgtgaggaa |
46452304 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 421 - 491
Target Start/End: Original strand, 51049647 - 51049717
Alignment:
| Q |
421 |
aatccatccataattttcatggatgagcctacgtctggattagatgctagagctgctgcaattgttatgcg |
491 |
Q |
| |
|
|||||||| |||||||| |||||||| ||||| || || || |||||| ||||||||||| | |||||||| |
|
|
| T |
51049647 |
aatccatcgataatttttatggatgaacctacatcaggtttggatgctcgagctgctgcagtagttatgcg |
51049717 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 529 - 582
Target Start/End: Original strand, 51049755 - 51049808
Alignment:
| Q |
529 |
gtttgcaccattcatcaaccaagtattgacatattcgaagcttttgatgaggta |
582 |
Q |
| |
|
||||||||||| |||||||||||||| || ||||| || |||||||||||||| |
|
|
| T |
51049755 |
gtttgcaccatacatcaaccaagtatcgatatatttgagacttttgatgaggta |
51049808 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 162; Significance: 9e-86; HSPs: 16)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 162; E-Value: 9e-86
Query Start/End: Original strand, 277 - 582
Target Start/End: Complemental strand, 44233879 - 44233574
Alignment:
| Q |
277 |
aaatggttgtagatgttcattgaggaagtcatggaactagtggagctcaacccattgagaaactctttggttggtttgcctggtgtgaatggtctttcaa |
376 |
Q |
| |
|
||||||||| ||||||| ||||| ||||||||||| ||||||||||| ||| ||||||| |||||| | ||||||||||||||||||| |||||| |||| |
|
|
| T |
44233879 |
aaatggttgcagatgtttattgacgaagtcatggatctagtggagctgaactcattgaggaactctctagttggtttgcctggtgtgagtggtctctcaa |
44233780 |
T |
|
| Q |
377 |
ccgaacaacgcaagaggctaactattgctgttgaattagtggccaatccatccataattttcatggatgagcctacgtctggattagatgctagagctgc |
476 |
Q |
| |
|
| ||||| |||||||| || |||||||| |||||| | ||||| |||||||| |||||||| |||||||||||||| ||||| ||||||||||||||||| |
|
|
| T |
44233779 |
ctgaacagcgcaagagactgactattgcagttgaacttgtggctaatccatctataatttttatggatgagcctacttctggtttagatgctagagctgc |
44233680 |
T |
|
| Q |
477 |
tgcaattgttatgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagcttttgat |
576 |
Q |
| |
|
||||||||||||| |||| || |||||||| || |||||||||||||||||||| || ||||| ||||| || || ||||||||||| ||||| |||||| |
|
|
| T |
44233679 |
tgcaattgttatgagaactgtaaggaacacagtggacacaggaagaacagttgtgtgtaccatccatcagcctagcattgacatatttgaagcatttgat |
44233580 |
T |
|
| Q |
577 |
gaggta |
582 |
Q |
| |
|
|||||| |
|
|
| T |
44233579 |
gaggta |
44233574 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 158; E-Value: 2e-83
Query Start/End: Original strand, 277 - 582
Target Start/End: Complemental strand, 44223057 - 44222752
Alignment:
| Q |
277 |
aaatggttgtagatgttcattgaggaagtcatggaactagtggagctcaacccattgagaaactctttggttggtttgcctggtgtgaatggtctttcaa |
376 |
Q |
| |
|
||||||||| ||||||| ||||| ||||||||||| ||||||||||| ||| | ||||| |||||| | ||||||||||||||||||| |||||| |||| |
|
|
| T |
44223057 |
aaatggttgcagatgtttattgatgaagtcatggatctagtggagctgaactcgttgaggaactctctagttggtttgcctggtgtgagtggtctctcaa |
44222958 |
T |
|
| Q |
377 |
ccgaacaacgcaagaggctaactattgctgttgaattagtggccaatccatccataattttcatggatgagcctacgtctggattagatgctagagctgc |
476 |
Q |
| |
|
| ||||| |||||||| || |||||||| || ||| | ||||| |||||||| ||||||||||||||||||||||| ||||| |||||||||||||| || |
|
|
| T |
44222957 |
ctgaacagcgcaagagactgactattgcagtcgaacttgtggctaatccatctataattttcatggatgagcctacttctggtttagatgctagagcggc |
44222858 |
T |
|
| Q |
477 |
tgcaattgttatgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagcttttgat |
576 |
Q |
| |
|
|||||||||||||||||| || |||||||| || ||||| |||||||||||||| || ||||| |||||||| || ||||||||||| ||||| |||||| |
|
|
| T |
44222857 |
tgcaattgttatgcgaactgtaaggaacacagtggacacgggaagaacagttgtgtgtaccatccatcaacctagcattgacatatttgaagcatttgat |
44222758 |
T |
|
| Q |
577 |
gaggta |
582 |
Q |
| |
|
|||||| |
|
|
| T |
44222757 |
gaggta |
44222752 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 138; E-Value: 2e-71
Query Start/End: Original strand, 277 - 582
Target Start/End: Complemental strand, 44210857 - 44210552
Alignment:
| Q |
277 |
aaatggttgtagatgttcattgaggaagtcatggaactagtggagctcaacccattgagaaactctttggttggtttgcctggtgtgaatggtctttcaa |
376 |
Q |
| |
|
||||| ||| ||||||| ||||||||||| ||||| || |||||||| ||| | ||||| |||| | ||||||||||||||||| | |||||| |||| |
|
|
| T |
44210857 |
aaatgcttgcagatgtttattgaggaagtaatggatcttgtggagctgaactcgttgagggactccctcgttggtttgcctggtgttagtggtctctcaa |
44210758 |
T |
|
| Q |
377 |
ccgaacaacgcaagaggctaactattgctgttgaattagtggccaatccatccataattttcatggatgagcctacgtctggattagatgctagagctgc |
476 |
Q |
| |
|
| |||||||| || ||| | |||||||| |||||| ||||||| ||||| |||||||||||||||||||| || || ||||| ||||||||||||||||| |
|
|
| T |
44210757 |
cggaacaacgtaaaaggttgactattgcagttgaactagtggctaatccgtccataattttcatggatgaaccaacttctggtttagatgctagagctgc |
44210658 |
T |
|
| Q |
477 |
tgcaattgttatgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagcttttgat |
576 |
Q |
| |
|
||||||||||||| |||| || |||||||| || |||||||||||||||||||| || ||||| |||||||| || ||||||||||| ||||| |||||| |
|
|
| T |
44210657 |
tgcaattgttatgagaactgtaaggaacacagtggacacaggaagaacagttgtgtgtaccatccatcaacctagcattgacatatttgaagcatttgat |
44210558 |
T |
|
| Q |
577 |
gaggta |
582 |
Q |
| |
|
|||||| |
|
|
| T |
44210557 |
gaggta |
44210552 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 84; E-Value: 3e-39
Query Start/End: Original strand, 1081 - 1296
Target Start/End: Complemental strand, 44233045 - 44232830
Alignment:
| Q |
1081 |
caggagaaacaagcaacttatagaagaattaggcaaacctgcacctggttcaaatgatctttatttctctgcccaatactcacaatcatttttagtccaa |
1180 |
Q |
| |
|
||||||||||||||||||||| ||||| | || |||||| ||||||||||| |||||| ||||| || | |||| ||| || || || || |||||| |
|
|
| T |
44233045 |
caggagaaacaagcaacttattcaagaacttagcgtacctgctcctggttcaaaggatcttcatttccctactcaattctcgcagtctttcttggtccaa |
44232946 |
T |
|
| Q |
1181 |
tgtttggcttgcttatggaaacaacattggtcatattggcgcaacccgccatacacttctgtgaggtttttcttcactgttttcataggcttgatgtttg |
1280 |
Q |
| |
|
|| ||| |||||||||||||||| ||||||||||||||| || || ||||||||| |||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
44232945 |
tgccaggcctgcttatggaaacaacgttggtcatattggcgtaatccaccatacactgctgtgaggtttttcttcactacattcataggcttgatgtttg |
44232846 |
T |
|
| Q |
1281 |
gaacaatattttggga |
1296 |
Q |
| |
|
||||||| || ||||| |
|
|
| T |
44232845 |
gaacaatgttctggga |
44232830 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 78; E-Value: 1e-35
Query Start/End: Original strand, 1079 - 1296
Target Start/End: Complemental strand, 44210026 - 44209809
Alignment:
| Q |
1079 |
ttcaggagaaacaagcaacttatagaagaattaggcaaacctgcacctggttcaaatgatctttatttctctgcccaatactcacaatcatttttagtcc |
1178 |
Q |
| |
|
||||||||||||||||||||||| ||||| | ||| ||||| ||||||||||| |||||| ||||| || | |||| ||| || || || || |||| |
|
|
| T |
44210026 |
ttcaggagaaacaagcaacttattcaagaacttggcgtgcctgctcctggttcaaaggatcttcatttccctactcaattctcgcagtctttcttggtcc |
44209927 |
T |
|
| Q |
1179 |
aatgtttggcttgcttatggaaacaacattggtcatattggcgcaacccgccatacacttctgtgaggtttttcttcactgttttcataggcttgatgtt |
1278 |
Q |
| |
|
|||| ||| |||||||||||||||| ||||||||||||||| || || ||||||||| ||||||||||||||||||| ||||||| ||||||||| |
|
|
| T |
44209926 |
aatgccaggcctgcttatggaaacaacgttggtcatattggcgtaatccaccatacactgctgtgaggtttttcttcacgacattcatagccttgatgtt |
44209827 |
T |
|
| Q |
1279 |
tggaacaatattttggga |
1296 |
Q |
| |
|
||||||||| || ||||| |
|
|
| T |
44209826 |
tggaacaatgttctggga |
44209809 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 78; E-Value: 1e-35
Query Start/End: Original strand, 1079 - 1296
Target Start/End: Complemental strand, 44222221 - 44222004
Alignment:
| Q |
1079 |
ttcaggagaaacaagcaacttatagaagaattaggcaaacctgcacctggttcaaatgatctttatttctctgcccaatactcacaatcatttttagtcc |
1178 |
Q |
| |
|
||||||||||||||||||||||| ||||| | || ||||| ||||||||||| |||||| ||||| || | |||| ||| || || || || || | |
|
|
| T |
44222221 |
ttcaggagaaacaagcaacttattcaagaacttagcgtgcctgctcctggttcaaaggatcttcatttccctactcaattctcgcagtctttcttggttc |
44222122 |
T |
|
| Q |
1179 |
aatgtttggcttgcttatggaaacaacattggtcatattggcgcaacccgccatacacttctgtgaggtttttcttcactgttttcataggcttgatgtt |
1278 |
Q |
| |
|
|||| ||| |||||||||||||||| ||||||||||||||| || || ||||||||| |||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
44222121 |
aatgccaggcctgcttatggaaacaacgttggtcatattggcgtaatccaccatacactgctgtgaggtttttcttcactaccttcataggcttgatgtt |
44222022 |
T |
|
| Q |
1279 |
tggaacaatattttggga |
1296 |
Q |
| |
|
||||||||| || ||||| |
|
|
| T |
44222021 |
tggaacaatgttctggga |
44222004 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 73; E-Value: 1e-32
Query Start/End: Original strand, 14 - 170
Target Start/End: Complemental strand, 44234103 - 44233947
Alignment:
| Q |
14 |
tttctgggtaccctaaaaaacaagaaacgtttgctcgaatctctggttattgtgagcagaatgatatccattctcctcatgttactgtctatgagtcact |
113 |
Q |
| |
|
|||||||||| |||||||| |||||||| |||||| ||||||| ||||| ||||||||||||||||||||||| ||||||||||| || |||||||| | |
|
|
| T |
44234103 |
tttctgggtatcctaaaaagcaagaaacatttgctagaatctccggttactgtgagcagaatgatatccattcacctcatgttacagtttatgagtcttt |
44234004 |
T |
|
| Q |
114 |
ggtctactcggcctggcttcgtttaccagcagacgttgattcaaataccagaaaggt |
170 |
Q |
| |
|
| | ||||| || |||||||||||||| ||| |||||||| || ||||||||||| |
|
|
| T |
44234003 |
gctttactcagcgtggcttcgtttaccttcaggagttgattccaacaccagaaaggt |
44233947 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 69; E-Value: 3e-30
Query Start/End: Original strand, 14 - 170
Target Start/End: Complemental strand, 44223281 - 44223125
Alignment:
| Q |
14 |
tttctgggtaccctaaaaaacaagaaacgtttgctcgaatctctggttattgtgagcagaatgatatccattctcctcatgttactgtctatgagtcact |
113 |
Q |
| |
|
||||||||||||||||||| |||||||| |||||| |||| ||||| || ||||||||||||||||||||||| || |||||||| || |||||||| | |
|
|
| T |
44223281 |
tttctgggtaccctaaaaagcaagaaacatttgctagaatttctggctactgtgagcagaatgatatccattcaccgcatgttacagtttatgagtcttt |
44223182 |
T |
|
| Q |
114 |
ggtctactcggcctggcttcgtttaccagcagacgttgattcaaataccagaaaggt |
170 |
Q |
| |
|
| | || ||||| |||||||||||||| ||| |||||||| || ||||||||||| |
|
|
| T |
44223181 |
gctttattcggcgtggcttcgtttaccttcaggagttgattccaacaccagaaaggt |
44223125 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 664 - 753
Target Start/End: Complemental strand, 44233464 - 44233375
Alignment:
| Q |
664 |
tattcctcatgaaacgcggaggagaagaaatatatgttggaccgctgggtcgtcattctagtcaattgatcaagtattttgaggttggat |
753 |
Q |
| |
|
||||||| |||||||| |||||| ||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||| |||| |
|
|
| T |
44233464 |
tattccttatgaaacgtggaggacaagaaatatatgttggaccattgggtcgtcattctactcatttgatcaagtattttgaggtaggat |
44233375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 57; E-Value: 4e-23
Query Start/End: Original strand, 14 - 170
Target Start/End: Complemental strand, 44211119 - 44210963
Alignment:
| Q |
14 |
tttctgggtaccctaaaaaacaagaaacgtttgctcgaatctctggttattgtgagcagaatgatatccattctcctcatgttactgtctatgagtcact |
113 |
Q |
| |
|
||||||||||||||||||| |||||||| |||||| |||| ||||| || ||||| ||||||||||| ||||| ||||||||||| || ||||| || || |
|
|
| T |
44211119 |
tttctgggtaccctaaaaagcaagaaacatttgctagaatatctggctactgtgaacagaatgatattcattcacctcatgttacagtttatgaatccct |
44211020 |
T |
|
| Q |
114 |
ggtctactcggcctggcttcgtttaccagcagacgttgattcaaataccagaaaggt |
170 |
Q |
| |
|
| ||||| || |||||||||||||| | | |||||||| ||||| |||||||| |
|
|
| T |
44211019 |
tctttactcagcatggcttcgtttaccttctggagttgattccaatactagaaaggt |
44210963 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 55; E-Value: 6e-22
Query Start/End: Original strand, 664 - 774
Target Start/End: Complemental strand, 44222644 - 44222534
Alignment:
| Q |
664 |
tattcctcatgaaacgcggaggagaagaaatatatgttggaccgctgggtcgtcattctagtcaattgatcaagtattttgaggttggatgcaacttata |
763 |
Q |
| |
|
||||||| ||||| || |||||| ||||||||||||||||||| |||||||||||||||| ||| |||||||||||||| ||||| |||| | |||| |
|
|
| T |
44222644 |
tattccttatgaagcgtggaggacaagaaatatatgttggaccactgggtcgtcattctactcatttgatcaagtatttcgaggtaggatcctactttag |
44222545 |
T |
|
| Q |
764 |
tttaatattac |
774 |
Q |
| |
|
||||||||||| |
|
|
| T |
44222544 |
tttaatattac |
44222534 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 52; E-Value: 4e-20
Query Start/End: Original strand, 661 - 748
Target Start/End: Complemental strand, 44210446 - 44210359
Alignment:
| Q |
661 |
agttattcctcatgaaacgcggaggagaagaaatatatgttggaccgctgggtcgtcattctagtcaattgatcaagtattttgaggt |
748 |
Q |
| |
|
|||||||||| |||||||| |||||| | ||||||||||||||||| ||||||||||||||| ||| |||||||||||||| ||||| |
|
|
| T |
44210446 |
agttattccttatgaaacgtggaggacaggaaatatatgttggaccattgggtcgtcattctactcatttgatcaagtatttcgaggt |
44210359 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 51; E-Value: 2e-19
Query Start/End: Original strand, 854 - 940
Target Start/End: Complemental strand, 44222465 - 44222379
Alignment:
| Q |
854 |
agagcattgaaggggttagtaaaatcaaagatggctataatccagcaacttggatgttggaagtttcgagttcagcacaagaactta |
940 |
Q |
| |
|
|||||||||| || |||||||||||||||||||| ||||| |||||||| ||||||||||||||| | | | ||||||||||||||| |
|
|
| T |
44222465 |
agagcattgacggagttagtaaaatcaaagatggatataacccagcaacatggatgttggaagttacaactacagcacaagaactta |
44222379 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 373 - 542
Target Start/End: Complemental strand, 43457131 - 43456962
Alignment:
| Q |
373 |
tcaaccgaacaacgcaagaggctaactattgctgttgaattagtggccaatccatccataattttcatggatgagcctacgtctggattagatgctagag |
472 |
Q |
| |
|
|||||||||||||| || |||||||| || || ||||| | | || ||||| || || |||||||||||||| || || || || | ||||| |||| |
|
|
| T |
43457131 |
tcaaccgaacaacgaaaaaggctaacaatagcggttgagcttattgctaatccttcaatcattttcatggatgaaccaacttcaggtcttgatgcaagag |
43457032 |
T |
|
| Q |
473 |
ctgctgcaattgttatgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattca |
542 |
Q |
| |
|
|||| |||||||||||| | || || || ||||| |||||||| |||||||||||||| ||||| ||||| |
|
|
| T |
43457031 |
ctgcagcaattgttatgaggacagtgagaaacactgttgacactggaagaacagttgtctgcacaattca |
43456962 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 854 - 957
Target Start/End: Complemental strand, 44210264 - 44210161
Alignment:
| Q |
854 |
agagcattgaaggggttagtaaaatcaaagatggctataatccagcaacttggatgttggaagtttcgagttcagcacaagaacttactttaggaattga |
953 |
Q |
| |
|
|||||||||| || || |||||||||||||| || ||||| |||||||| ||||||||||||||| | | | | ||||||||||||| ||| || |||| |
|
|
| T |
44210264 |
agagcattgacggagtgagtaaaatcaaagacggatataacccagcaacatggatgttggaagttacaactaccgcacaagaacttaatttgggtgttga |
44210165 |
T |
|
| Q |
954 |
tttt |
957 |
Q |
| |
|
|||| |
|
|
| T |
44210164 |
tttt |
44210161 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 854 - 940
Target Start/End: Complemental strand, 44233285 - 44233199
Alignment:
| Q |
854 |
agagcattgaaggggttagtaaaatcaaagatggctataatccagcaacttggatgttggaagtttcgagttcagcacaagaactta |
940 |
Q |
| |
|
|||||||||| || || |||||||||||||| || ||||| |||||||| ||||||||||||||| | | | | ||||||||||||| |
|
|
| T |
44233285 |
agagcattgacggagtgagtaaaatcaaagacggatataacccagcaacatggatgttggaagttacaactaccgcacaagaactta |
44233199 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 95; Significance: 8e-46; HSPs: 6)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 95; E-Value: 8e-46
Query Start/End: Original strand, 370 - 588
Target Start/End: Complemental strand, 2160434 - 2160216
Alignment:
| Q |
370 |
ctttcaaccgaacaacgcaagaggctaactattgctgttgaattagtggccaatccatccataattttcatggatgagcctacgtctggattagatgcta |
469 |
Q |
| |
|
||||| ||||||||||||||||| ||||| || || |||||| | || || |||||||| ||||| |||||||||||||| || ||||| | ||||||| |
|
|
| T |
2160434 |
ctttcgaccgaacaacgcaagagactaacgatcgcagttgaacttgtagcgaatccatcgataatattcatggatgagccaacctctggccttgatgcta |
2160335 |
T |
|
| Q |
470 |
gagctgctgcaattgttatgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagc |
569 |
Q |
| |
|
|||| ||||||||||| ||| |||| || |||||||| |||||||||||| | || ||||||||||| || ||||| |||||||||||||||||||| || |
|
|
| T |
2160334 |
gagcagctgcaattgtaatgagaacagtgaggaacacagttgacacaggacgtactgttgtttgcacaatccatcagccaagtattgacatattcgacgc |
2160235 |
T |
|
| Q |
570 |
ttttgatgaggtaagaaat |
588 |
Q |
| |
|
||||||||||||| |||| |
|
|
| T |
2160234 |
ctttgatgaggtaacaaat |
2160216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 69; E-Value: 3e-30
Query Start/End: Original strand, 287 - 583
Target Start/End: Complemental strand, 2148689 - 2148393
Alignment:
| Q |
287 |
agatgttcattgaggaagtcatggaactagtggagctcaacccattgagaaactctttggttggtttgcctggtgtgaatggtctttcaaccgaacaacg |
386 |
Q |
| |
|
||||||| ||||||||||| ||||| || || ||||| ||| |||| ||| | | | ||||| ||||| || | ||||| |||||||||||||| || |
|
|
| T |
2148689 |
agatgtttattgaggaagttatggagcttgtagagcttaactcattaagagaagcacttgttggattgccaggcgaaaatggactttcaaccgaacagcg |
2148590 |
T |
|
| Q |
387 |
caagaggctaactattgctgttgaattagtggccaatccatccataattttcatggatgagcctacgtctggattagatgctagagctgctgcaattgtt |
486 |
Q |
| |
|
|||||| || |||||||| |||||| | || || |||||||| ||||| ||||||||||| || || ||||| | |||||| |||| ||||| ||||| |
|
|
| T |
2148589 |
caagagacttactattgcagttgaacttgtagcgaatccatcgataatattcatggatgaaccaacctctggcctggatgctcgagcagctgcgattgta |
2148490 |
T |
|
| Q |
487 |
atgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagcttttgatgaggtaa |
583 |
Q |
| |
|
|||||||| || |||||||| || ||||||||| | || || || ||||| || ||||| || |||||||||||||| || | ||||||||||||| |
|
|
| T |
2148489 |
atgcgaacagtaaggaacactgtggacacaggacgtaccgtggtgtgcacgatccatcagccgagtattgacatatttgattcctttgatgaggtaa |
2148393 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 60; E-Value: 6e-25
Query Start/End: Original strand, 388 - 583
Target Start/End: Original strand, 19543187 - 19543382
Alignment:
| Q |
388 |
aagaggctaactattgctgttgaattagtggccaatccatccataattttcatggatgagcctacgtctggattagatgctagagctgctgcaattgtta |
487 |
Q |
| |
|
|||||||| || |||||||| ||||| || || || || ||||| || || |||||||| || ||| |||| | |||||||||||||| ||| | |||| |
|
|
| T |
19543187 |
aagaggcttaccattgctgtagaattggttgcaaacccttccattatctttatggatgaaccaacgactggtcttgatgctagagctgcagcagtagtta |
19543286 |
T |
|
| Q |
488 |
tgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagcttttgatgaggtaa |
583 |
Q |
| |
|
|||| || ||||| ||||| ||||| ||||| ||||| ||||| ||||| |||||||||||||||||||| || || ||| |||||||||||||| |
|
|
| T |
19543287 |
tgcgtactgttagaaacacagttgatacagggagaactgttgtgtgcacaattcatcaaccaagtattgatatttttgaaaattttgatgaggtaa |
19543382 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 50; E-Value: 6e-19
Query Start/End: Original strand, 373 - 582
Target Start/End: Complemental strand, 41687359 - 41687150
Alignment:
| Q |
373 |
tcaaccgaacaacgcaagaggctaactattgctgttgaattagtggccaatccatccataattttcatggatgagcctacgtctggattagatgctagag |
472 |
Q |
| |
|
||||| |||||| | ||||| || || |||||||| ||||| || |||||||| || || || || |||||||||||||| || || | ||||| |||| |
|
|
| T |
41687359 |
tcaacagaacaaagaaagagactcaccattgctgtagaattggttgccaatccttcaatcatctttatggatgagcctacatcaggccttgatgccagag |
41687260 |
T |
|
| Q |
473 |
ctgctgcaattgttatgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagcttt |
572 |
Q |
| |
|
|||| |||||||||||||| || || || || || | || ||||| ||||| || || ||||| ||||| |||||||| ||||| ||||| ||| |||| |
|
|
| T |
41687259 |
ctgcagcaattgttatgcgtactgtcagaaatacagcggatacagggagaactgtggtctgcacaattcaccaaccaagcattgatatatttgaatcttt |
41687160 |
T |
|
| Q |
573 |
tgatgaggta |
582 |
Q |
| |
|
|||||||||| |
|
|
| T |
41687159 |
tgatgaggta |
41687150 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 463 - 584
Target Start/End: Complemental strand, 25986741 - 25986620
Alignment:
| Q |
463 |
gatgctagagctgctgcaattgttatgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatat |
562 |
Q |
| |
|
||||||||||| ||||| |||| |||||||| || || |||||||| |||||||| ||||| ||||| ||||| ||||| |||||||| ||||| || | |
|
|
| T |
25986741 |
gatgctagagccgctgctattgagatgcgaactgtgagaaacacggtagacacagggagaactgttgtgtgcacaattcaccaaccaagcattgatattt |
25986642 |
T |
|
| Q |
563 |
tcgaagcttttgatgaggtaag |
584 |
Q |
| |
|
| |||||||||||||| |||| |
|
|
| T |
25986641 |
tttaagcttttgatgagataag |
25986620 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 463 - 580
Target Start/End: Original strand, 18238368 - 18238484
Alignment:
| Q |
463 |
gatgctagagctgctgcaattgttatgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatat |
562 |
Q |
| |
|
|||||||||| | ||| ||||| |||||||| || | ||||| || ||||||||||||| ||||| ||||| ||||| |||||||| ||||| || | |
|
|
| T |
18238368 |
gatgctagagtcggtgctattgtgatgcgaactgtgaaaaacacagtagacacaggaagaattgttgtgtgcacaattcaccaaccaagcattgatat-t |
18238466 |
T |
|
| Q |
563 |
tcgaagcttttgatgagg |
580 |
Q |
| |
|
| ||||||||||||||| |
|
|
| T |
18238467 |
tttaagcttttgatgagg |
18238484 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 83; Significance: 1e-38; HSPs: 35)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 83; E-Value: 1e-38
Query Start/End: Original strand, 287 - 581
Target Start/End: Complemental strand, 39537907 - 39537613
Alignment:
| Q |
287 |
agatgttcattgaggaagtcatggaactagtggagctcaacccattgagaaactctttggttggtttgcctggtgtgaatggtctttcaaccgaacaacg |
386 |
Q |
| |
|
||||||||||||| |||||||||||||| ||||| || || ||| || | ||| | || || || | |||||||| | |||| ||||| || || || |
|
|
| T |
39537907 |
agatgttcattgaagaagtcatggaacttgtggaactgaaaccactgcggaacgcattagtaggactacctggtgttagcagtctctcaacggagcagcg |
39537808 |
T |
|
| Q |
387 |
caagaggctaactattgctgttgaattagtggccaatccatccataattttcatggatgagcctacgtctggattagatgctagagctgctgcaattgtt |
486 |
Q |
| |
|
||| ||||| |||||||| ||||| || || || ||||| || ||||| |||||||||||||| || |||||| | ||||| || ||||| || |||||| |
|
|
| T |
39537807 |
caaaaggctgactattgcagttgagttggttgctaatccttctataatattcatggatgagccaacttctggacttgatgcaagggctgcagctattgtt |
39537708 |
T |
|
| Q |
487 |
atgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagcttttgatgaggt |
581 |
Q |
| |
|
||| |||| ||||||||||| || ||||| ||||||||||||||||| |||||||| ||||| || ||||| ||||| ||| ||||||||||||| |
|
|
| T |
39537707 |
atgagaacagttaggaacacagtagacactggaagaacagttgtttgtaccattcaccaacctagcattgatatatttgaatcttttgatgaggt |
39537613 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 83; E-Value: 1e-38
Query Start/End: Original strand, 283 - 581
Target Start/End: Complemental strand, 39547376 - 39547078
Alignment:
| Q |
283 |
ttgtagatgttcattgaggaagtcatggaactagtggagctcaacccattgagaaactctttggttggtttgcctggtgtgaatggtctttcaaccgaac |
382 |
Q |
| |
|
||||||||||||||||||||||| |||||||| ||||| || || ||| || |||| | | || || | |||||||| | ||||| ||||| || | |
|
|
| T |
39547376 |
ttgtagatgttcattgaggaagtaatggaacttgtggaactgaaaccactgcaaaacgcaatagtaggactacctggtgttagcggtctctcaacggagc |
39547277 |
T |
|
| Q |
383 |
aacgcaagaggctaactattgctgttgaattagtggccaatccatccataattttcatggatgagcctacgtctggattagatgctagagctgctgcaat |
482 |
Q |
| |
|
| ||||| ||||| |||||||| ||||| || || || ||||| || ||||| |||||||||||||| || |||||| | ||||| |||||||| || || |
|
|
| T |
39547276 |
agcgcaaaaggctgactattgcagttgagttggttgctaatccttctataatattcatggatgagccaacttctggacttgatgcaagagctgcagctat |
39547177 |
T |
|
| Q |
483 |
tgttatgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagcttttgatgaggt |
581 |
Q |
| |
|
||||||| |||| ||||||||||| || ||||| ||||||||||||||||| ||||| || || || || ||||| ||||| ||| ||||||||||||| |
|
|
| T |
39547176 |
tgttatgagaacagttaggaacacagtagacaccggaagaacagttgtttgtaccatccaccagcctagcattgatatatttgaatcttttgatgaggt |
39547078 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 75; E-Value: 7e-34
Query Start/End: Original strand, 358 - 580
Target Start/End: Complemental strand, 42153772 - 42153550
Alignment:
| Q |
358 |
ggtgtgaatggtctttcaaccgaacaacgcaagaggctaactattgctgttgaattagtggccaatccatccataattttcatggatgagcctacgtctg |
457 |
Q |
| |
|
|||||| ||||||| ||||| |||||| | |||||||| ||||||||||| || | || ||||| || || || || ||||||||||| || || || | |
|
|
| T |
42153772 |
ggtgtggatggtctatcaacagaacaaaggaagaggcttactattgctgtagagcttgttgccaacccttcaatcatcttcatggatgaaccaacatcag |
42153673 |
T |
|
| Q |
458 |
gattagatgctagagctgctgcaattgttatgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattga |
557 |
Q |
| |
|
| | ||||||||||| |||||||| |||||||||||||| || || || || || ||||| ||||| ||||||||||| ||||||||||||||||| || |
|
|
| T |
42153672 |
gcctcgatgctagagccgctgcaatcgttatgcgaaccgtgagaaatacagtagatacagggagaactgttgtttgcacaattcatcaaccaagtataga |
42153573 |
T |
|
| Q |
558 |
catattcgaagcttttgatgagg |
580 |
Q |
| |
|
||| || |||||||||||||||| |
|
|
| T |
42153572 |
catttttgaagcttttgatgagg |
42153550 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 71; E-Value: 2e-31
Query Start/End: Original strand, 287 - 581
Target Start/End: Original strand, 39338949 - 39339243
Alignment:
| Q |
287 |
agatgttcattgaggaagtcatggaactagtggagctcaacccattgagaaactctttggttggtttgcctggtgtgaatggtctttcaaccgaacaacg |
386 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||| || || ||| || |||| | | || || | |||||||| | ||||| ||||| || || || |
|
|
| T |
39338949 |
agatgttcattgaggaagtcatggaacttgtggaactgaaaccactgcaaaacgcaatagtaggactacctggtgttagcggtctctcaacggagcagcg |
39339048 |
T |
|
| Q |
387 |
caagaggctaactattgctgttgaattagtggccaatccatccataattttcatggatgagcctacgtctggattagatgctagagctgctgcaattgtt |
486 |
Q |
| |
|
||| ||||| ||| |||| ||||| || || || ||||| || ||||| |||||||||||||| || ||||| ||||||| || ||||| || |||||| |
|
|
| T |
39339049 |
caaaaggctgactgttgcagttgagttggttgctaatccttcaataatattcatggatgagccaacttctgggctagatgcaagggctgcagctattgtt |
39339148 |
T |
|
| Q |
487 |
atgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagcttttgatgaggt |
581 |
Q |
| |
|
||| |||| ||||||||||| || ||||| ||||||||||||||||| || || || || || || ||||| ||||| ||| ||||||||||||| |
|
|
| T |
39339149 |
atgagaacagttaggaacacagtagacactggaagaacagttgtttgtacaatccaccagcctagcattgatatatttgaatcttttgatgaggt |
39339243 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 71; E-Value: 2e-31
Query Start/End: Original strand, 358 - 580
Target Start/End: Complemental strand, 42141970 - 42141748
Alignment:
| Q |
358 |
ggtgtgaatggtctttcaaccgaacaacgcaagaggctaactattgctgttgaattagtggccaatccatccataattttcatggatgagcctacgtctg |
457 |
Q |
| |
|
|||||| ||||||| ||||| |||||| | |||||||| ||||| |||||||| | || ||||| || || || || ||||||||||| || || || | |
|
|
| T |
42141970 |
ggtgtggatggtctatcaacagaacaaaggaagaggcttactatcgctgttgagcttgttgccaacccttcaatcatcttcatggatgaaccaacatcag |
42141871 |
T |
|
| Q |
458 |
gattagatgctagagctgctgcaattgttatgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattga |
557 |
Q |
| |
|
| | ||||||||||| |||||||| |||||||| ||||| || || || || || ||||| ||||| ||||||||||| ||||||||||||||||| || |
|
|
| T |
42141870 |
gcctcgatgctagagccgctgcaatcgttatgcggaccgtgagaaatacagtggatacagggagaactgttgtttgcacaattcatcaaccaagtataga |
42141771 |
T |
|
| Q |
558 |
catattcgaagcttttgatgagg |
580 |
Q |
| |
|
||| || |||||||||||||||| |
|
|
| T |
42141770 |
catttttgaagcttttgatgagg |
42141748 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 68; E-Value: 1e-29
Query Start/End: Original strand, 286 - 581
Target Start/End: Complemental strand, 1084710 - 1084415
Alignment:
| Q |
286 |
tagatgttcattgaggaagtcatggaactagtggagctcaacccattgagaaactctttggttggtttgcctggtgtgaatggtctttcaaccgaacaac |
385 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| || || || || ||||| | || || || | |||||||| | |||| ||||| || | | |
|
|
| T |
1084710 |
tagatgttcattgaggaagtcatggaacttgtggaactgaaatcagtgcgaaacgcattagtaggactacctggtgttagcagtctctcaacagagtagc |
1084611 |
T |
|
| Q |
386 |
gcaagaggctaactattgctgttgaattagtggccaatccatccataattttcatggatgagcctacgtctggattagatgctagagctgctgcaattgt |
485 |
Q |
| |
|
||| ||||| |||||||| ||||| || || | ||||| || ||||| || ||||||||||| || ||||| ||||||| | || || || ||||| |
|
|
| T |
1084610 |
acaaaaggctgactattgcagttgagttggtttctaatccttctataatatttatggatgagccaacttctgggctagatgcaatggcagcagcgattgt |
1084511 |
T |
|
| Q |
486 |
tatgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagcttttgatgaggt |
581 |
Q |
| |
|
|||| |||| ||||||| ||| || ||||| |||||||| |||||||||||||| ||||||||||||||||| ||||| ||| ||||||||||||| |
|
|
| T |
1084510 |
tatgagaacagttaggagcacagtagacactggaagaactgttgtttgcaccatccatcaaccaagtattgatatatttgaatcttttgatgaggt |
1084415 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 65; E-Value: 7e-28
Query Start/End: Original strand, 353 - 581
Target Start/End: Original strand, 39366438 - 39366666
Alignment:
| Q |
353 |
tgcctggtgtgaatggtctttcaaccgaacaacgcaagaggctaactattgctgttgaattagtggccaatccatccataattttcatggatgagcctac |
452 |
Q |
| |
|
|||||||||| | |||||| || || || || ||||| ||||||||| |||| |||||||| || || ||||| || ||||| |||||||||||||| || |
|
|
| T |
39366438 |
tgcctggtgttagtggtctctcgacagagcagcgcaaaaggctaactgttgcagttgaattggtagctaatccttcaataatattcatggatgagccaac |
39366537 |
T |
|
| Q |
453 |
gtctggattagatgctagagctgctgcaattgttatgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagt |
552 |
Q |
| |
|
||||| ||||||| || ||||| || || || ||| || | ||||||||||| |||||||| |||||||| |||||||| ||||| || || || || |
|
|
| T |
39366538 |
ttctgggctagatgcgagggctgcagctatagtgatgagagcagttaggaacacagttgacaccggaagaactgttgtttgtaccatccaccagcctagc |
39366637 |
T |
|
| Q |
553 |
attgacatattcgaagcttttgatgaggt |
581 |
Q |
| |
|
||||| ||||| ||| ||||||||||||| |
|
|
| T |
39366638 |
attgatatatttgaatcttttgatgaggt |
39366666 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 64; E-Value: 3e-27
Query Start/End: Original strand, 278 - 581
Target Start/End: Complemental strand, 39564012 - 39563709
Alignment:
| Q |
278 |
aatggttgtagatgttcattgaggaagtcatggaactagtggagctcaacccattgagaaactctttggttggtttgcctggtgtgaatggtctttcaac |
377 |
Q |
| |
|
|||||||| |||||||| ||||||||||||||||||| ||||| || || ||| || |||| | || || || |||||||||| |||||||| || || |
|
|
| T |
39564012 |
aatggttgcagatgttcgttgaggaagtcatggaacttgtggaactgaaaccactgcaaaacgcattagtaggactgcctggtgttaatggtctctcgac |
39563913 |
T |
|
| Q |
378 |
cgaacaacgcaagaggctaactattgctgttgaattagtggccaatccatccataattttcatggatgagcctacgtctggattagatgctagagctgct |
477 |
Q |
| |
|
|| || ||||| || | || ||||| ||||| || || || ||||| || ||||| ||||||||||| || || ||||| ||||||| || ||||| |
|
|
| T |
39563912 |
ggagcagcgcaaacggttgacaattgcagttgagttggtagctaatccttcaataatattcatggatgaaccaacttctgggctagatgcaagggctgca |
39563813 |
T |
|
| Q |
478 |
gcaattgttatgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagcttttgatg |
577 |
Q |
| |
|
|| ||||| ||| |||| ||||||||||| || |||| ||||||||||||||||| || || || || || || ||||| ||||| ||| ||||||||| |
|
|
| T |
39563812 |
gctattgtgatgagaacagttaggaacacagtaaacactggaagaacagttgtttgtactatccaccagcctagcattgatatatttgaatcttttgatg |
39563713 |
T |
|
| Q |
578 |
aggt |
581 |
Q |
| |
|
|||| |
|
|
| T |
39563712 |
aggt |
39563709 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 278 - 583
Target Start/End: Complemental strand, 39589094 - 39588789
Alignment:
| Q |
278 |
aatggttgtagatgttcattgaggaagtcatggaactagtggagctcaacccattgagaaactctttggttggtttgcctggtgtgaatggtctttcaac |
377 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||| || |||||||| ||||| | || | | | || || ||||| || || | |||||| || || |
|
|
| T |
39589094 |
aatggttgcagatgttcattgaggaagtcatggagcttgtggagctaaacccgcttagggatgcaattgtcggattgccaggggttagtggtctatcgac |
39588995 |
T |
|
| Q |
378 |
cgaacaacgcaagaggctaactattgctgttgaattagtggccaatccatccataattttcatggatgagcctacgtctggattagatgctagagctgct |
477 |
Q |
| |
|
|| |||||||| ||| | || |||| ||||| |||||||| ||||| || ||||| |||||||||||||| || || || ||||||| || ||||| |
|
|
| T |
39588994 |
ggagcaacgcaaaaggttgacagttgcagttgagttagtggctaatccttctataatattcatggatgagccaacttcggggctagatgcaagggctgca |
39588895 |
T |
|
| Q |
478 |
gcaattgttatgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagcttttgatg |
577 |
Q |
| |
|
| ||||||||| || | ||||| |||| || ||||||||||||||| ||||||| ||||||||||| || || ||| | ||||| ||| ||||||| | |
|
|
| T |
39588894 |
tctattgttatgagagcagttagaaacatagtggacacaggaagaacaattgtttgtaccattcatcagcccagcattcatatatttgaatcttttgacg |
39588795 |
T |
|
| Q |
578 |
aggtaa |
583 |
Q |
| |
|
|||||| |
|
|
| T |
39588794 |
aggtaa |
39588789 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 355 - 580
Target Start/End: Complemental strand, 42171613 - 42171388
Alignment:
| Q |
355 |
cctggtgtgaatggtctttcaaccgaacaacgcaagaggctaactattgctgttgaattagtggccaatccatccataattttcatggatgagcctacgt |
454 |
Q |
| |
|
||||||||| ||||||| ||||| |||||| | ||||| || | ||||||||| ||||| || || || || || || || ||||||||||| || || | |
|
|
| T |
42171613 |
cctggtgtggatggtctatcaacagaacaaaggaagagacttagtattgctgtggaattggttgctaacccttcaatcatcttcatggatgaaccaacat |
42171514 |
T |
|
| Q |
455 |
ctggattagatgctagagctgctgcaattgttatgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtat |
554 |
Q |
| |
|
| || | ||||||||||| ||||| ||||||||||| ||||| || || || || || ||||| ||||| ||||||||||| |||||||||||||| | |
|
|
| T |
42171513 |
caggccttgatgctagagccgctgctattgttatgcggaccgtgagaaatacagtagatacagggagaactgttgtttgcacaattcatcaaccaagcac |
42171414 |
T |
|
| Q |
555 |
tgacatattcgaagcttttgatgagg |
580 |
Q |
| |
|
|| || || |||||||||||||||| |
|
|
| T |
42171413 |
ggatatttttgaagcttttgatgagg |
42171388 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 56; E-Value: 2e-22
Query Start/End: Original strand, 373 - 580
Target Start/End: Complemental strand, 42132786 - 42132579
Alignment:
| Q |
373 |
tcaaccgaacaacgcaagaggctaactattgctgttgaattagtggccaatccatccataattttcatggatgagcctacgtctggattagatgctagag |
472 |
Q |
| |
|
||||| |||||| | || ||||| ||||||||||| ||||| || || || || || || || ||||||||||| || || || || | |||||||||| |
|
|
| T |
42132786 |
tcaacagaacaaaggaaaaggcttactattgctgtggaattggttgctaacccttcaatcatcttcatggatgaaccaacatcaggccttgatgctagag |
42132687 |
T |
|
| Q |
473 |
ctgctgcaattgttatgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagcttt |
572 |
Q |
| |
|
| ||||| ||||| |||||||| || || ||||| || |||||||| ||||| ||||| ||||| ||||| |||||||| ||||| || || |||||||| |
|
|
| T |
42132686 |
ccgctgccattgtgatgcgaactgtgagaaacacagtagacacagggagaactgttgtgtgcacaattcaccaaccaagcattgatatttttgaagcttt |
42132587 |
T |
|
| Q |
573 |
tgatgagg |
580 |
Q |
| |
|
|||||||| |
|
|
| T |
42132586 |
tgatgagg |
42132579 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 51; E-Value: 2e-19
Query Start/End: Original strand, 287 - 581
Target Start/End: Original strand, 39353792 - 39354086
Alignment:
| Q |
287 |
agatgttcattgaggaagtcatggaactagtggagctcaacccattgagaaactctttggttggtttgcctggtgtgaatggtctttcaaccgaacaacg |
386 |
Q |
| |
|
|||||||| ||||||||||||||||||| ||||| || || ||| || |||| | || || || | |||||||| ||||| |||| || || || |
|
|
| T |
39353792 |
agatgttcgttgaggaagtcatggaacttgtggaactgaaaccactgcgaaatgcattagtaggacttcctggtgtttgcggtctctcaatggagcagcg |
39353891 |
T |
|
| Q |
387 |
caagaggctaactattgctgttgaattagtggccaatccatccataattttcatggatgagcctacgtctggattagatgctagagctgctgcaattgtt |
486 |
Q |
| |
|
||| ||||| ||| |||| ||||| || || || ||||| || ||||| ||||||||||| || || ||||| ||||||| || ||||| ||| |||| |
|
|
| T |
39353892 |
caaaaggctgactgttgcagttgagttggttgctaatccttcaataatattcatggatgaaccaacttctgggctagatgcaagggctgcagcagttgtg |
39353991 |
T |
|
| Q |
487 |
atgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagcttttgatgaggt |
581 |
Q |
| |
|
||| |||| ||||| ||||| || || |||||||||||||||||||| || || || || || || ||||| ||||| ||| ||||||||||||| |
|
|
| T |
39353992 |
atgagaacagttagaaacacagtagatacaggaagaacagttgtttgtacaatccaccagcctagcattgatatatttgaatcttttgatgaggt |
39354086 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 51; E-Value: 2e-19
Query Start/End: Original strand, 265 - 583
Target Start/End: Complemental strand, 39574639 - 39574321
Alignment:
| Q |
265 |
tttggatctgataaatggttgtagatgttcattgaggaagtcatggaactagtggagctcaacccattgagaaactctttggttggtttgcctggtgtga |
364 |
Q |
| |
|
|||||| |||| ||||||| ||||||| |||||||||||||||| ||||||||| | ||||||||||| | | | |||||| | || ||| | | |
|
|
| T |
39574639 |
tttggagctgaccaatggttacagatgtttgttgaggaagtcatggagctagtggagttgaacccattgagggatgcatatgttggtctcccaggtatta |
39574540 |
T |
|
| Q |
365 |
atggtctttcaaccgaacaacgcaagaggctaactattgctgttgaattagtggccaatccatccataattttcatggatgagcctacgtctggattaga |
464 |
Q |
| |
|
| ||||| ||||| || || || || || | |||||||| |||||| | ||| ||||| || || || |||||||||||||| || ||||| ||||| |
|
|
| T |
39574539 |
acggtctatcaactgagcagcgtaaaagattgactattgcagttgaactggtgtgtaatccttctatcatattcatggatgagccaacttctgggttaga |
39574440 |
T |
|
| Q |
465 |
tgctagagctgctgcaattgttatgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatattc |
564 |
Q |
| |
|
||| |||||||| || ||||||||| || | |||||||||| || ||||| ||||||||| |||| || |||||||| || || || ||||| || || |
|
|
| T |
39574439 |
tgcaagagctgcagctattgttatgagagcagttaggaacatagtggacactggaagaacaattgtgtgtaccattcaccagcccagcattgatatcttt |
39574340 |
T |
|
| Q |
565 |
gaagcttttgatgaggtaa |
583 |
Q |
| |
|
||| |||| |||||||||| |
|
|
| T |
39574339 |
gaatctttcgatgaggtaa |
39574321 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 107
Target Start/End: Complemental strand, 39589434 - 39589339
Alignment:
| Q |
12 |
aatttctgggtaccctaaaaaacaagaaacgtttgctcgaatctctggttattgtgagcagaatgatatccattctcctcatgttactgtctatga |
107 |
Q |
| |
|
||||||||| || ||||| || |||||||| ||||| |||| ||||| || |||||||| ||||||||||| ||||||||||||||||| ||||| |
|
|
| T |
39589434 |
aatttctggatatcctaagaagcaagaaacatttgcaagaatttctggatactgtgagcaaaatgatatccactctcctcatgttactgtatatga |
39589339 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 34 - 107
Target Start/End: Original strand, 39338737 - 39338810
Alignment:
| Q |
34 |
caagaaacgtttgctcgaatctctggttattgtgagcagaatgatatccattctcctcatgttactgtctatga |
107 |
Q |
| |
|
|||||||| ||||| |||| ||||| || |||||||| | ||||||||||||||||||||||||||||||||| |
|
|
| T |
39338737 |
caagaaacctttgcaagaatttctggatactgtgagcaaactgatatccattctcctcatgttactgtctatga |
39338810 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 28 - 107
Target Start/End: Original strand, 39353574 - 39353653
Alignment:
| Q |
28 |
aaaaaacaagaaacgtttgctcgaatctctggttattgtgagcagaatgatatccattctcctcatgttactgtctatga |
107 |
Q |
| |
|
||||| |||||||| ||||| |||| ||||| || |||||||| | |||||||||||||||| |||||||||||||||| |
|
|
| T |
39353574 |
aaaaagcaagaaacctttgcaagaatttctggatactgtgagcaaactgatatccattctccttatgttactgtctatga |
39353653 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1178 - 1224
Target Start/End: Original strand, 39339867 - 39339913
Alignment:
| Q |
1178 |
caatgtttggcttgcttatggaaacaacattggtcatattggcgcaa |
1224 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
39339867 |
caatgtatggcttgcttatggaaacaacattggtcttattggcgcaa |
39339913 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1178 - 1224
Target Start/End: Original strand, 39354688 - 39354734
Alignment:
| Q |
1178 |
caatgtttggcttgcttatggaaacaacattggtcatattggcgcaa |
1224 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
39354688 |
caatgtatggcttgcttatggaaacaacattggtcttattggcgcaa |
39354734 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 34 - 107
Target Start/End: Original strand, 39366090 - 39366163
Alignment:
| Q |
34 |
caagaaacgtttgctcgaatctctggttattgtgagcagaatgatatccattctcctcatgttactgtctatga |
107 |
Q |
| |
|
|||||||| ||||| |||| ||||| || || ||||| | ||||||||||||||||||||||||||||||||| |
|
|
| T |
39366090 |
caagaaacctttgcaagaatttctggatactgcgagcaaactgatatccattctcctcatgttactgtctatga |
39366163 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 34 - 107
Target Start/End: Complemental strand, 39564363 - 39564290
Alignment:
| Q |
34 |
caagaaacgtttgctcgaatctctggttattgtgagcagaatgatatccattctcctcatgttactgtctatga |
107 |
Q |
| |
|
|||||||| ||||| |||| ||||| || |||||||| ||||||||||| |||||| |||||||||||||||| |
|
|
| T |
39564363 |
caagaaacctttgcaagaatttctgggtactgtgagcaaaatgatatccactctccttatgttactgtctatga |
39564290 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 880 - 936
Target Start/End: Complemental strand, 39574023 - 39573967
Alignment:
| Q |
880 |
aaagatggctataatccagcaacttggatgttggaagtttcgagttcagcacaagaa |
936 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||| | || |||||| ||||| |
|
|
| T |
39574023 |
aaagatggctacaatccagcaacttggatgttggaagttactagctcagcaaaagaa |
39573967 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 57 - 113
Target Start/End: Complemental strand, 42171890 - 42171834
Alignment:
| Q |
57 |
tggttattgtgagcagaatgatatccattctcctcatgttactgtctatgagtcact |
113 |
Q |
| |
|
|||||| || || ||||||||||| |||||||||||||||||||||||||| ||||| |
|
|
| T |
42171890 |
tggttactgcgaacagaatgatattcattctcctcatgttactgtctatgaatcact |
42171834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 107
Target Start/End: Complemental strand, 39547554 - 39547511
Alignment:
| Q |
64 |
tgtgagcagaatgatatccattctcctcatgttactgtctatga |
107 |
Q |
| |
|
|||||||| | ||||||||||||||||||||||||||||||||| |
|
|
| T |
39547554 |
tgtgagcaaactgatatccattctcctcatgttactgtctatga |
39547511 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1185 - 1224
Target Start/End: Complemental strand, 39563125 - 39563086
Alignment:
| Q |
1185 |
tggcttgcttatggaaacaacattggtcatattggcgcaa |
1224 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
39563125 |
tggcttgcttatggaaacaacattggtcttattggcgcaa |
39563086 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1176 - 1224
Target Start/End: Complemental strand, 39573673 - 39573625
Alignment:
| Q |
1176 |
tccaatgtttggcttgcttatggaaacaacattggtcatattggcgcaa |
1224 |
Q |
| |
|
|||||||| ||||||| |||||||||||||||||||| || |||||||| |
|
|
| T |
39573673 |
tccaatgtatggcttgtttatggaaacaacattggtcttactggcgcaa |
39573625 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 43 - 107
Target Start/End: Complemental strand, 42133111 - 42133047
Alignment:
| Q |
43 |
tttgctcgaatctctggttattgtgagcagaatgatatccattctcctcatgttactgtctatga |
107 |
Q |
| |
|
||||||||| || ||||||||||||||| |||||||| |||||||| |||| ||||||||||| |
|
|
| T |
42133111 |
tttgctcgagtcagtggttattgtgagcaaaatgatattcattctccctatgtaactgtctatga |
42133047 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 107
Target Start/End: Complemental strand, 39538096 - 39538053
Alignment:
| Q |
64 |
tgtgagcagaatgatatccattctcctcatgttactgtctatga |
107 |
Q |
| |
|
|||||||| | |||||||||||||||| |||||||||||||||| |
|
|
| T |
39538096 |
tgtgagcaaactgatatccattctccttatgttactgtctatga |
39538053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 863 - 917
Target Start/End: Original strand, 39339556 - 39339610
Alignment:
| Q |
863 |
aaggggttagtaaaatcaaagatggctataatccagcaacttggatgttggaagt |
917 |
Q |
| |
|
|||| ||||| || |||||||| || |||||||||||||| |||||||||||||| |
|
|
| T |
39339556 |
aaggtgttagcaagatcaaagacggttataatccagcaacatggatgttggaagt |
39339610 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 863 - 917
Target Start/End: Original strand, 39354397 - 39354451
Alignment:
| Q |
863 |
aaggggttagtaaaatcaaagatggctataatccagcaacttggatgttggaagt |
917 |
Q |
| |
|
|||| ||||| || |||||||| || |||||||||||||| |||||||||||||| |
|
|
| T |
39354397 |
aaggtgttagaaagatcaaagacggttataatccagcaacatggatgttggaagt |
39354451 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1190 - 1224
Target Start/End: Original strand, 39367301 - 39367335
Alignment:
| Q |
1190 |
tgcttatggaaacaacattggtcatattggcgcaa |
1224 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||| |
|
|
| T |
39367301 |
tgcttatggaaacaacattggtcttattggcgcaa |
39367335 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1178 - 1224
Target Start/End: Complemental strand, 39546339 - 39546293
Alignment:
| Q |
1178 |
caatgtttggcttgcttatggaaacaacattggtcatattggcgcaa |
1224 |
Q |
| |
|
|||||| ||||||| |||||||||||||||||||| || |||||||| |
|
|
| T |
39546339 |
caatgtatggcttgtttatggaaacaacattggtcttactggcgcaa |
39546293 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 110
Target Start/End: Complemental strand, 39575180 - 39575098
Alignment:
| Q |
28 |
aaaaaacaagaaacgtttgctcgaatctctggttattgtgagcagaatgatatccattctcctcatgttactgtctatgagtc |
110 |
Q |
| |
|
||||| |||||||| ||||| |||| || || || |||||||| |||||||| || ||||||||| |||| ||||||||||| |
|
|
| T |
39575180 |
aaaaagcaagaaacctttgcaagaatttccggatactgtgagcaaaatgatatacactctcctcatattacggtctatgagtc |
39575098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 110
Target Start/End: Complemental strand, 1084925 - 1084844
Alignment:
| Q |
29 |
aaaaacaagaaacgtttgctcgaatctctggttattgtgagcagaatgatatccattctcctcatgttactgtctatgagtc |
110 |
Q |
| |
|
|||| |||||||| ||| | |||| ||||| || |||||||| | |||||||||||||||||| |||||||||| ||||| |
|
|
| T |
1084925 |
aaaagcaagaaacatttacaagaatttctggatactgtgagcaaatagatatccattctcctcattttactgtctacgagtc |
1084844 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 880 - 917
Target Start/End: Complemental strand, 39588501 - 39588464
Alignment:
| Q |
880 |
aaagatggctataatccagcaacttggatgttggaagt |
917 |
Q |
| |
|
|||||||| |||||||||||||||||||| |||||||| |
|
|
| T |
39588501 |
aaagatggatataatccagcaacttggattttggaagt |
39588464 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1186 - 1235
Target Start/End: Complemental strand, 39620997 - 39620948
Alignment:
| Q |
1186 |
ggcttgcttatggaaacaacattggtcatattggcgcaacccgccataca |
1235 |
Q |
| |
|
||||||||||||||||||||||||||| || ||||| || |||| ||||| |
|
|
| T |
39620997 |
ggcttgcttatggaaacaacattggtcttactggcggaatccgcgataca |
39620948 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 80; Significance: 7e-37; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 80; E-Value: 7e-37
Query Start/End: Original strand, 346 - 581
Target Start/End: Original strand, 49773508 - 49773743
Alignment:
| Q |
346 |
gttggtttgcctggtgtgaatggtctttcaaccgaacaacgcaagaggctaactattgctgttgaattagtggccaatccatccataattttcatggatg |
445 |
Q |
| |
|
||||| || ||||||||||||||||| || || ||||| ||||||||| |||| ||||| |||||| | || ||||||||||| || || |||||||||| |
|
|
| T |
49773508 |
gttggattacctggtgtgaatggtctgtccacagaacagcgcaagaggttaacgattgcagttgaacttgttgccaatccatctattatattcatggatg |
49773607 |
T |
|
| Q |
446 |
agcctacgtctggattagatgctagagctgctgcaattgttatgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatca |
545 |
Q |
| |
|
| ||||| ||||| | ||||| ||||||||||| || || ||| |||| || ||||| || || |||||||| ||||| ||||| ||||| |||||||| |
|
|
| T |
49773608 |
aacctacctctggccttgatgcaagagctgctgctatagtaatgagaacagtgaggaatacagtggacacagggagaactgttgtctgcacaattcatca |
49773707 |
T |
|
| Q |
546 |
accaagtattgacatattcgaagcttttgatgaggt |
581 |
Q |
| |
|
|| |||||||| ||||| || |||||||||||||| |
|
|
| T |
49773708 |
gcctagtattgatatatttgatgcttttgatgaggt |
49773743 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 430 - 581
Target Start/End: Complemental strand, 25522972 - 25522821
Alignment:
| Q |
430 |
ataattttcatggatgagcctacgtctggattagatgctagagctgctgcaattgttatgcgaaccgttaggaacacggttgacacaggaagaacagttg |
529 |
Q |
| |
|
||||| ||||||||||| ||||| || ||| | ||||| | || ||||| ||||||||| |||| ||| | || || ||||| || |||||||| || | |
|
|
| T |
25522972 |
ataatcttcatggatgaacctacctccggacttgatgcacgtgccgctgccattgttatgagaactgttcgcaatactgttgatactggaagaactgtgg |
25522873 |
T |
|
| Q |
530 |
tttgcaccattcatcaaccaagtattgacatattcgaagcttttgatgaggt |
581 |
Q |
| |
|
|||| ||||| ||||| ||||||||||| ||||| ||||| ||||||||||| |
|
|
| T |
25522872 |
tttgtaccatacatcagccaagtattgatatatttgaagcatttgatgaggt |
25522821 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 463 - 580
Target Start/End: Complemental strand, 12717123 - 12717006
Alignment:
| Q |
463 |
gatgctagagctgctgcaattgttatgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatat |
562 |
Q |
| |
|
||||||||||| ||||| ||||| ||| |||| || || ||||| || |||||||| ||||| ||||| ||||| ||||| |||||||| ||||| || | |
|
|
| T |
12717123 |
gatgctagagccgctgctattgtgatgtgaactgtgagaaacacagtagacacagggagaactgttgtgtgcacaattcaccaaccaagcattgatattt |
12717024 |
T |
|
| Q |
563 |
tcgaagcttttgatgagg |
580 |
Q |
| |
|
| ||||||||||||||| |
|
|
| T |
12717023 |
tttaagcttttgatgagg |
12717006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 107
Target Start/End: Original strand, 49773210 - 49773298
Alignment:
| Q |
19 |
gggtaccctaaaaaacaagaaacgtttgctcgaatctctggttattgtgagcagaatgatatccattctcctcatgttactgtctatga |
107 |
Q |
| |
|
||||||||||| || |||||||| ||| |||| || || || || |||||||| | ||||||||| ||||| ||||||||||||||||| |
|
|
| T |
49773210 |
gggtaccctaagaagcaagaaacattttctcggatatcaggatactgtgagcaaactgatatccactctccccatgttactgtctatga |
49773298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 55; Significance: 6e-22; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 55; E-Value: 6e-22
Query Start/End: Original strand, 436 - 582
Target Start/End: Original strand, 4501718 - 4501864
Alignment:
| Q |
436 |
ttcatggatgagcctacgtctggattagatgctagagctgctgcaattgttatgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgca |
535 |
Q |
| |
|
|||||||||||||| || ||||| ||||||| ||||| ||||| ||||||||| | || || || ||||| ||||| || |||||||||||||| |||| |
|
|
| T |
4501718 |
ttcatggatgagccaacttctggtctagatgcaagagcagctgctattgttatgaggactgtaagaaacactgttgatactggaagaacagttgtgtgca |
4501817 |
T |
|
| Q |
536 |
ccattcatcaaccaagtattgacatattcgaagcttttgatgaggta |
582 |
Q |
| |
|
| ||||||||||| || ||||| || || ||||| |||||||||||| |
|
|
| T |
4501818 |
caattcatcaacctagcattgatatctttgaagcctttgatgaggta |
4501864 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 463 - 550
Target Start/End: Original strand, 43530787 - 43530874
Alignment:
| Q |
463 |
gatgctagagctgctgcaattgttatgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaa |
550 |
Q |
| |
|
|||||||||||||| ||| | |||||||| || ||||| ||||| |||| ||||| ||||| ||||| ||||| ||||||||||||| |
|
|
| T |
43530787 |
gatgctagagctgcagcagtagttatgcgtactgttagaaacacagttgttacagggagaactgttgtgtgcacaattcatcaaccaa |
43530874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 463 - 580
Target Start/End: Complemental strand, 31383161 - 31383044
Alignment:
| Q |
463 |
gatgctagagctgctgcaattgttatgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatat |
562 |
Q |
| |
|
|||||||||| |||||| ||||| |||||||| | || ||||| | |||||||||||||| |||| ||||| ||||| ||||||| ||||| || | |
|
|
| T |
31383161 |
gatgctagagttgctgctattgtgatgcgaactatgagaaacacaatagacacaggaagaactattgtgtgcacaattcaccaaccaaacattgatattt |
31383062 |
T |
|
| Q |
563 |
tcgaagcttttgatgagg |
580 |
Q |
| |
|
| ||||||||||||||| |
|
|
| T |
31383061 |
tttaagcttttgatgagg |
31383044 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 463 - 580
Target Start/End: Original strand, 5196222 - 5196339
Alignment:
| Q |
463 |
gatgctagagctgctgcaattgttatgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatat |
562 |
Q |
| |
|
||||||||||| ||||| ||||| |||| ||| || || ||||| || || ||| | |||||| |||| ||||| ||| | |||||||| ||||| || | |
|
|
| T |
5196222 |
gatgctagagccgctgctattgtgatgcaaactgtgagaaacacagtagatacatggagaacatttgtgtgcacaatttaccaaccaagcattgatattt |
5196321 |
T |
|
| Q |
563 |
tcgaagcttttgatgagg |
580 |
Q |
| |
|
| ||||||||||||||| |
|
|
| T |
5196322 |
tttaagcttttgatgagg |
5196339 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0210 (Bit Score: 50; Significance: 6e-19; HSPs: 1)
Name: scaffold0210
Description:
Target: scaffold0210; HSP #1
Raw Score: 50; E-Value: 6e-19
Query Start/End: Original strand, 463 - 580
Target Start/End: Original strand, 8802 - 8919
Alignment:
| Q |
463 |
gatgctagagctgctgcaattgttatgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatat |
562 |
Q |
| |
|
||||||||||||||||| ||||| |||||||| || || ||||| || |||||||| |||| ||||| ||||| ||||| |||||||||||||| || | |
|
|
| T |
8802 |
gatgctagagctgctgctattgtgatgcgaactgtgagaaacacagtagacacagggagaaatgttgtgtgcacaattcaccaaccaagtattgatattt |
8901 |
T |
|
| Q |
563 |
tcgaagcttttgatgagg |
580 |
Q |
| |
|
| ||||||||||||||| |
|
|
| T |
8902 |
tttaagcttttgatgagg |
8919 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 48; Significance: 9e-18; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 48; E-Value: 9e-18
Query Start/End: Original strand, 427 - 578
Target Start/End: Original strand, 29777435 - 29777586
Alignment:
| Q |
427 |
tccataattttcatggatgagcctacgtctggattagatgctagagctgctgcaattgttatgcgaaccgttaggaacacggttgacacaggaagaacag |
526 |
Q |
| |
|
||||| ||||| ||||| |||||||| |||||| | |||||| | || || || || ||||||||||| ||| | ||||| ||||| || |||||||| | |
|
|
| T |
29777435 |
tccattatttttatggacgagcctacatctggacttgatgctcgtgccgcagctatcgttatgcgaactgttcgcaacactgttgatactggaagaactg |
29777534 |
T |
|
| Q |
527 |
ttgtttgcaccattcatcaaccaagtattgacatattcgaagcttttgatga |
578 |
Q |
| |
|
|||| || ||||| ||||||||||||||||| || || ||||| |||||||| |
|
|
| T |
29777535 |
ttgtctgtaccatacatcaaccaagtattgatatttttgaagcatttgatga |
29777586 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 38; Significance: 0.000000000009; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 475 - 580
Target Start/End: Complemental strand, 10901823 - 10901718
Alignment:
| Q |
475 |
gctgcaattgttatgcgaaccgttaggaacacggttgacacaggaagaacagttgtttgcaccattcatcaaccaagtattgacatattcgaagcttttg |
574 |
Q |
| |
|
||||| ||||| ||| |||| || || ||||| || |||||||||||||| ||||| ||||| ||||| |||||||| ||||| || || ||||||||| |
|
|
| T |
10901823 |
gctgctattgtgatgtgaactgtgagaaacacagtagacacaggaagaactgttgtgtgcacaattcaccaaccaagcattgatattttttaagcttttg |
10901724 |
T |
|
| Q |
575 |
atgagg |
580 |
Q |
| |
|
|||||| |
|
|
| T |
10901723 |
atgagg |
10901718 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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