View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19113_high_27 (Length: 318)

Name: NF19113_high_27
Description: NF19113
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19113_high_27
NF19113_high_27
[»] chr1 (49 HSPs)
chr1 (103-286)||(40406340-40406520)
chr1 (1-54)||(1677402-1677455)
chr1 (1-54)||(13566883-13566936)
chr1 (1-54)||(29830957-29831010)
chr1 (1-54)||(35531275-35531328)
chr1 (1-54)||(38648661-38648714)
chr1 (1-54)||(43500710-43500763)
chr1 (6-54)||(35483761-35483809)
chr1 (10-54)||(40926733-40926777)
chr1 (1-51)||(31487762-31487812)
chr1 (6-55)||(2059791-2059840)
chr1 (1-54)||(12124848-12124901)
chr1 (1-54)||(12231051-12231104)
chr1 (1-54)||(13507974-13508027)
chr1 (1-54)||(13515162-13515215)
chr1 (2-55)||(18344531-18344584)
chr1 (1-54)||(37609284-37609337)
chr1 (5-54)||(51972261-51972310)
chr1 (6-54)||(1024765-1024813)
chr1 (6-54)||(45368297-45368345)
chr1 (1-55)||(50825552-50825606)
chr1 (1-54)||(8464237-8464290)
chr1 (1-54)||(20605604-20605657)
chr1 (1-54)||(30686615-30686668)
chr1 (1-54)||(31588720-31588773)
chr1 (1-54)||(32168292-32168345)
chr1 (6-55)||(32348187-32348235)
chr1 (1-54)||(33720721-33720774)
chr1 (1-54)||(37437033-37437086)
chr1 (1-54)||(52759232-52759285)
chr1 (1-45)||(1039061-1039105)
chr1 (1-45)||(1045967-1046011)
chr1 (6-54)||(1429493-1429541)
chr1 (6-54)||(4100889-4100937)
chr1 (2-54)||(10676107-10676159)
chr1 (6-54)||(36318561-36318609)
chr1 (1-47)||(5598249-5598295)
chr1 (1-51)||(9362177-9362227)
chr1 (1-51)||(48174656-48174706)
chr1 (9-51)||(51974154-51974196)
chr1 (1-55)||(52649708-52649762)
chr1 (1-47)||(52749219-52749265)
chr1 (1-54)||(19349359-19349412)
chr1 (1-54)||(35700355-35700408)
chr1 (1-54)||(48264756-48264809)
chr1 (6-47)||(49497361-49497402)
chr1 (1-54)||(51613615-51613668)
chr1 (6-54)||(42800315-42800363)
chr1 (1-61)||(44182962-44183021)
[»] chr6 (27 HSPs)
chr6 (1-56)||(1751413-1751468)
chr6 (1-54)||(22050252-22050305)
chr6 (1-60)||(17251233-17251292)
chr6 (1-54)||(3621794-3621847)
chr6 (1-54)||(7056124-7056177)
chr6 (1-54)||(24663583-24663636)
chr6 (1-54)||(30388970-30389023)
chr6 (1-54)||(32359424-32359477)
chr6 (6-54)||(19645706-19645754)
chr6 (1-60)||(8176637-8176696)
chr6 (1-52)||(11129035-11129086)
chr6 (1-55)||(3850524-3850578)
chr6 (1-55)||(11676598-11676652)
chr6 (1-54)||(364526-364579)
chr6 (1-54)||(12732379-12732432)
chr6 (6-51)||(17123972-17124017)
chr6 (1-54)||(34607302-34607355)
chr6 (1-57)||(17836097-17836153)
chr6 (6-54)||(24949316-24949364)
chr6 (12-54)||(17193373-17193415)
chr6 (1-51)||(23777500-23777550)
chr6 (1-55)||(33260909-33260963)
chr6 (10-55)||(1135164-1135209)
chr6 (1-54)||(23923697-23923750)
chr6 (1-54)||(26485669-26485722)
chr6 (1-54)||(31244733-31244786)
chr6 (1-54)||(34379063-34379116)
[»] chr8 (54 HSPs)
chr8 (1-54)||(18842733-18842786)
chr8 (1-60)||(35052257-35052316)
chr8 (1-55)||(14228304-14228358)
chr8 (1-54)||(11994085-11994138)
chr8 (1-54)||(14263748-14263801)
chr8 (1-54)||(15596548-15596601)
chr8 (1-54)||(18291667-18291720)
chr8 (1-54)||(38128530-38128583)
chr8 (6-54)||(8453219-8453267)
chr8 (1-53)||(26062911-26062963)
chr8 (1-47)||(29091075-29091121)
chr8 (1-55)||(33935042-33935096)
chr8 (1-54)||(39303498-39303552)
chr8 (1-54)||(2888451-2888504)
chr8 (1-54)||(8553999-8554052)
chr8 (6-55)||(13328179-13328228)
chr8 (1-54)||(25703561-25703614)
chr8 (1-54)||(25812732-25812785)
chr8 (1-54)||(38482775-38482828)
chr8 (6-54)||(34982038-34982086)
chr8 (1-51)||(17074568-17074618)
chr8 (1-51)||(17573652-17573702)
chr8 (1-55)||(23430113-23430167)
chr8 (1-55)||(27911654-27911708)
chr8 (1-55)||(27958073-27958127)
chr8 (1-54)||(6757610-6757663)
chr8 (1-54)||(14061132-14061185)
chr8 (1-54)||(23848539-23848592)
chr8 (1-54)||(26740120-26740173)
chr8 (10-54)||(17313355-17313399)
chr8 (10-54)||(27518696-27518740)
chr8 (2-54)||(35052327-35052379)
chr8 (1-44)||(4057492-4057535)
chr8 (1-52)||(16656904-16656955)
chr8 (1-39)||(1202442-1202480)
chr8 (1-47)||(1245516-1245562)
chr8 (1-39)||(34047055-34047093)
chr8 (1-55)||(35296248-35296302)
chr8 (1-54)||(10180574-10180627)
chr8 (1-54)||(13174133-13174186)
chr8 (1-54)||(19972483-19972536)
chr8 (1-54)||(21020297-21020350)
chr8 (1-54)||(21651729-21651782)
chr8 (2-55)||(35029751-35029804)
chr8 (5-54)||(36058440-36058489)
chr8 (1-54)||(41701465-41701518)
chr8 (1-54)||(45281361-45281414)
chr8 (1-46)||(45317856-45317901)
chr8 (2-54)||(2456098-2456150)
chr8 (6-54)||(3720889-3720937)
chr8 (6-54)||(7483951-7483999)
chr8 (1-61)||(40228499-40228559)
chr8 (10-54)||(41308109-41308153)
chr8 (6-54)||(41643473-41643521)
[»] chr7 (33 HSPs)
chr7 (1-54)||(17896477-17896530)
chr7 (1-54)||(8265153-8265206)
chr7 (1-54)||(33099821-33099874)
chr7 (1-54)||(5732059-5732112)
chr7 (1-54)||(8382030-8382083)
chr7 (1-54)||(10227460-10227513)
chr7 (1-54)||(31430763-31430816)
chr7 (1-54)||(32528314-32528367)
chr7 (2-55)||(33258086-33258139)
chr7 (2-43)||(36298171-36298212)
chr7 (1-54)||(47408317-47408370)
chr7 (1-54)||(47459842-47459895)
chr7 (10-54)||(33174020-33174064)
chr7 (1-48)||(35860169-35860216)
chr7 (1-51)||(22950807-22950857)
chr7 (5-51)||(32966038-32966084)
chr7 (1-54)||(6799623-6799676)
chr7 (1-54)||(7312821-7312874)
chr7 (1-54)||(12838064-12838117)
chr7 (1-50)||(36922444-36922493)
chr7 (1-54)||(41675173-41675226)
chr7 (1-54)||(41891474-41891527)
chr7 (10-54)||(33921760-33921804)
chr7 (1-44)||(46715308-46715351)
chr7 (1-55)||(3310409-3310463)
chr7 (1-47)||(9601886-9601932)
chr7 (1-47)||(9829457-9829503)
chr7 (1-55)||(30866721-30866775)
chr7 (1-51)||(31815058-31815108)
chr7 (10-39)||(7477199-7477228)
chr7 (1-49)||(26724128-26724177)
chr7 (1-54)||(28608798-28608851)
chr7 (1-54)||(42841852-42841905)
[»] chr5 (52 HSPs)
chr5 (1-54)||(31803510-31803563)
chr5 (1-55)||(25344146-25344200)
chr5 (1-54)||(2673958-2674011)
chr5 (1-54)||(4175460-4175513)
chr5 (1-54)||(8825243-8825296)
chr5 (1-54)||(38910459-38910512)
chr5 (6-54)||(18000523-18000571)
chr5 (8-55)||(4985154-4985201)
chr5 (1-54)||(6754159-6754212)
chr5 (1-54)||(18794969-18795022)
chr5 (1-54)||(36239644-36239697)
chr5 (1-54)||(39073230-39073283)
chr5 (1-54)||(40198974-40199027)
chr5 (6-54)||(7579647-7579695)
chr5 (10-54)||(9127331-9127375)
chr5 (6-54)||(14793770-14793818)
chr5 (10-54)||(16124240-16124284)
chr5 (6-54)||(38017257-38017305)
chr5 (1-61)||(38363375-38363435)
chr5 (12-54)||(1297717-1297759)
chr5 (1-55)||(4427384-4427438)
chr5 (1-55)||(13703283-13703337)
chr5 (6-64)||(38502774-38502832)
chr5 (1-54)||(1087913-1087966)
chr5 (1-50)||(1795101-1795150)
chr5 (1-54)||(4017600-4017653)
chr5 (1-54)||(4098517-4098570)
chr5 (1-54)||(26854075-26854128)
chr5 (6-54)||(18437303-18437351)
chr5 (9-53)||(28024240-28024284)
chr5 (6-54)||(30368115-30368163)
chr5 (1-48)||(3892997-3893044)
chr5 (8-47)||(18020755-18020794)
chr5 (1-55)||(9076257-9076311)
chr5 (1-55)||(10889167-10889221)
chr5 (1-51)||(12665044-12665094)
chr5 (1-51)||(12869882-12869932)
chr5 (1-55)||(38308105-38308159)
chr5 (1-54)||(425310-425362)
chr5 (5-54)||(6072642-6072691)
chr5 (2-47)||(6689786-6689831)
chr5 (6-39)||(10359230-10359263)
chr5 (1-54)||(12722939-12722992)
chr5 (1-54)||(12784423-12784476)
chr5 (1-54)||(22582658-22582710)
chr5 (6-39)||(24074833-24074866)
chr5 (1-54)||(28446965-28447018)
chr5 (1-54)||(34261498-34261551)
chr5 (1-54)||(37809945-37809998)
chr5 (1-54)||(42911736-42911788)
chr5 (2-54)||(9958863-9958915)
chr5 (6-54)||(39893789-39893837)
[»] chr4 (63 HSPs)
chr4 (1-56)||(35232280-35232335)
chr4 (1-54)||(9834487-9834540)
chr4 (1-54)||(22828385-22828438)
chr4 (6-55)||(33751326-33751375)
chr4 (1-54)||(44013897-44013950)
chr4 (1-54)||(44217913-44217966)
chr4 (1-54)||(52061765-52061818)
chr4 (1-55)||(8735596-8735650)
chr4 (5-51)||(35231901-35231947)
chr4 (1-54)||(354173-354226)
chr4 (1-54)||(13629177-13629230)
chr4 (1-54)||(38009750-38009803)
chr4 (1-54)||(44069238-44069291)
chr4 (6-55)||(52677149-52677198)
chr4 (1-54)||(53599770-53599823)
chr4 (1-54)||(56576088-56576141)
chr4 (6-54)||(16464766-16464814)
chr4 (6-54)||(38617293-38617341)
chr4 (1-52)||(54231746-54231797)
chr4 (12-54)||(22678293-22678335)
chr4 (1-54)||(42513009-42513063)
chr4 (6-60)||(47751742-47751796)
chr4 (1-47)||(48782406-48782452)
chr4 (1-54)||(12252299-12252352)
chr4 (1-54)||(18091449-18091502)
chr4 (1-50)||(19093141-19093190)
chr4 (6-47)||(23237842-23237883)
chr4 (1-54)||(29511250-29511303)
chr4 (1-54)||(36659411-36659464)
chr4 (1-54)||(39671532-39671585)
chr4 (1-54)||(39683698-39683751)
chr4 (1-54)||(47428726-47428779)
chr4 (1-54)||(55935314-55935367)
chr4 (10-54)||(23719768-23719812)
chr4 (6-54)||(26620335-26620383)
chr4 (10-54)||(33755015-33755059)
chr4 (6-54)||(45725748-45725796)
chr4 (1-52)||(5374336-5374387)
chr4 (5-48)||(34464488-34464531)
chr4 (11-54)||(36408969-36409012)
chr4 (11-54)||(36423135-36423178)
chr4 (1-44)||(52977923-52977966)
chr4 (1-55)||(34603831-34603885)
chr4 (1-39)||(36408930-36408968)
chr4 (1-39)||(36423096-36423134)
chr4 (1-42)||(3436063-3436104)
chr4 (1-54)||(6195231-6195284)
chr4 (1-54)||(8456895-8456948)
chr4 (1-54)||(9220025-9220078)
chr4 (1-34)||(16664448-16664481)
chr4 (1-54)||(17698669-17698722)
chr4 (1-54)||(19527204-19527257)
chr4 (1-54)||(21044732-21044784)
chr4 (1-54)||(30939362-30939415)
chr4 (2-51)||(33809295-33809344)
chr4 (1-54)||(42099915-42099968)
chr4 (1-54)||(46872128-46872180)
chr4 (1-54)||(50623620-50623672)
chr4 (3-51)||(3036592-3036640)
chr4 (10-54)||(4201314-4201358)
chr4 (6-54)||(14090452-14090500)
chr4 (6-54)||(31861970-31862018)
chr4 (10-54)||(38027559-38027603)
[»] chr2 (38 HSPs)
chr2 (1-51)||(3376266-3376316)
chr2 (1-54)||(10812403-10812456)
chr2 (1-54)||(15182987-15183040)
chr2 (1-54)||(25558172-25558225)
chr2 (1-54)||(31011704-31011757)
chr2 (1-54)||(36375777-36375830)
chr2 (1-54)||(44360637-44360690)
chr2 (6-54)||(13215602-13215650)
chr2 (1-55)||(15893565-15893619)
chr2 (1-54)||(1259615-1259668)
chr2 (1-54)||(3363788-3363841)
chr2 (1-54)||(11222302-11222355)
chr2 (1-54)||(26342784-26342837)
chr2 (1-54)||(34357382-34357435)
chr2 (1-54)||(41885829-41885882)
chr2 (6-54)||(19594559-19594607)
chr2 (1-52)||(13965811-13965862)
chr2 (1-54)||(478959-479012)
chr2 (1-54)||(8443882-8443935)
chr2 (5-54)||(13000897-13000946)
chr2 (1-54)||(14284288-14284340)
chr2 (1-54)||(14295743-14295796)
chr2 (1-54)||(14308597-14308650)
chr2 (1-54)||(34399406-34399459)
chr2 (6-47)||(36173268-36173309)
chr2 (1-54)||(37093653-37093706)
chr2 (10-54)||(4654932-4654976)
chr2 (6-54)||(9706996-9707044)
chr2 (1-49)||(30264593-30264641)
chr2 (1-51)||(10263960-10264010)
chr2 (1-54)||(13754160-13754212)
chr2 (1-54)||(25787531-25787584)
chr2 (1-54)||(37354193-37354246)
chr2 (6-54)||(1395773-1395820)
chr2 (10-54)||(4883816-4883860)
chr2 (6-54)||(14288638-14288686)
chr2 (10-54)||(35158337-35158381)
chr2 (6-54)||(38072218-38072266)
[»] scaffold0280 (1 HSPs)
scaffold0280 (1-54)||(8358-8411)
[»] scaffold0024 (2 HSPs)
scaffold0024 (1-54)||(89374-89427)
scaffold0024 (1-54)||(49350-49403)
[»] chr3 (47 HSPs)
chr3 (1-54)||(45101347-45101400)
chr3 (1-54)||(49123726-49123779)
chr3 (1-54)||(54106467-54106520)
chr3 (6-54)||(29651877-29651925)
chr3 (10-57)||(33491125-33491172)
chr3 (5-51)||(29698199-29698245)
chr3 (1-47)||(41168962-41169008)
chr3 (1-55)||(41425833-41425887)
chr3 (12-54)||(42671879-42671921)
chr3 (1-54)||(13158428-13158481)
chr3 (1-54)||(34266429-34266482)
chr3 (1-58)||(40010649-40010706)
chr3 (1-54)||(40318917-40318970)
chr3 (1-54)||(43554593-43554646)
chr3 (1-54)||(51219082-51219135)
chr3 (1-54)||(53745271-53745324)
chr3 (6-54)||(19550455-19550503)
chr3 (6-54)||(20848713-20848761)
chr3 (1-61)||(43775372-43775432)
chr3 (8-55)||(2858565-2858612)
chr3 (9-55)||(29803860-29803906)
chr3 (1-63)||(47069837-47069899)
chr3 (6-47)||(24981499-24981540)
chr3 (1-54)||(32980844-32980897)
chr3 (1-54)||(35315336-35315389)
chr3 (5-54)||(36234572-36234621)
chr3 (2-55)||(45513306-45513359)
chr3 (2-54)||(3643185-3643237)
chr3 (7-51)||(27992450-27992494)
chr3 (6-54)||(33874535-33874583)
chr3 (1-60)||(33074261-33074320)
chr3 (1-52)||(52175923-52175974)
chr3 (1-39)||(26748556-26748594)
chr3 (1-47)||(28226620-28226666)
chr3 (12-54)||(43945594-43945636)
chr3 (6-55)||(32853348-32853397)
chr3 (1-62)||(35077591-35077652)
chr3 (1-54)||(35458493-35458546)
chr3 (1-54)||(39866839-39866891)
chr3 (1-54)||(41351183-41351236)
chr3 (1-54)||(42515163-42515216)
chr3 (6-39)||(46973632-46973665)
chr3 (1-54)||(50092149-50092202)
chr3 (13-54)||(52627227-52627268)
chr3 (6-54)||(7329033-7329081)
chr3 (1-53)||(13168209-13168261)
chr3 (2-54)||(28943523-28943574)
[»] scaffold0009 (1 HSPs)
scaffold0009 (2-54)||(147111-147163)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-47)||(195578-195624)
[»] scaffold0007 (1 HSPs)
scaffold0007 (1-55)||(77292-77346)
[»] scaffold0040 (1 HSPs)
scaffold0040 (1-54)||(69303-69356)
[»] scaffold0002 (2 HSPs)
scaffold0002 (1-54)||(148507-148560)
scaffold0002 (1-53)||(138727-138779)
[»] scaffold0343 (1 HSPs)
scaffold0343 (1-54)||(7628-7681)
[»] scaffold0172 (1 HSPs)
scaffold0172 (1-54)||(26111-26164)
[»] scaffold0135 (1 HSPs)
scaffold0135 (1-54)||(30676-30729)
[»] scaffold2146 (1 HSPs)
scaffold2146 (2-54)||(757-809)


Alignment Details
Target: chr1 (Bit Score: 158; Significance: 5e-84; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 103 - 286
Target Start/End: Original strand, 40406340 - 40406520
Alignment:
Q  103 ccgataatatattagggtgtgcatttgatgaagttggtggaataagaaaaggttatgttagctgggcagtggttaaacggtattgaactgccaattagcc 202  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40406340 ccgataatatattagggtgtgcatttgataaagttggtggaataagaaggggttatgttagctgggcagtggttaaacggtattgaactgccaattagcc 40406439  T
Q  203 tttaggtttgacttttaatcaagttcattctagatgtgcatataataatattgttttccacaaagcttggcaaactggttatgg 286  Q
    |||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||    
T  40406440 tttaggtttgacttttaatcaagttcattctagatgtgcat---ataatattgttttccacaaagcttggcaaactggttatgg 40406520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 1677402 - 1677455
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    ||||||||||||||||||||||||||| ||||||||||| || |||||||||||    
T  1677402 cttgatttgtgtaaaatgtcaaaatgtgacaattaaaaaggagcggaggtagta 1677455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 13566883 - 13566936
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  13566883 cttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagta 13566936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 29830957 - 29831010
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  29830957 cttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagta 29831010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 35531328 - 35531275
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  35531328 cttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagta 35531275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 38648661 - 38648714
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    ||||||||||||||||||||||||||| |||||||||||  |||||||||||||    
T  38648661 cttgatttgtgtaaaatgtcaaaatgtgacaattaaaaagaaacggaggtagta 38648714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 43500710 - 43500763
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  43500710 cttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagta 43500763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 35483809 - 35483761
Alignment:
Q  6 tttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||    
T  35483809 tttgtgtaaaatgtcaaaatatgacaattaaaaaagaacggaggtagta 35483761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 40926777 - 40926733
Alignment:
Q  10 tgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||||||||||||||| ||||||||||||||||||||||||||    
T  40926777 tgtaaaatgtcaaaatgtgacaattaaaaaagaacggaggtagta 40926733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 31487812 - 31487762
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggta 51  Q
    |||| |||||||||||||||||||||| ||||||||||| |||||||||||    
T  31487812 cttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggta 31487762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 55
Target Start/End: Complemental strand, 2059840 - 2059791
Alignment:
Q  6 tttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagtac 55  Q
    |||||||||||||||||||||| ||||||||||| ||| |||||||||||    
T  2059840 tttgtgtaaaatgtcaaaatgtgacaattaaaaaggaatggaggtagtac 2059791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 12124848 - 12124901
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||||||||||||||| |||||||| ||||||||||| ||||| ||||||||    
T  12124848 cttgatttgtgtaaaatggcaaaatgtgacaattaaaaaggaacgaaggtagta 12124901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 12231104 - 12231051
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| ||| |||||||||||||||||| ||||||||||| ||||||||||||||    
T  12231104 cttggtttatgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagta 12231051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 13507974 - 13508027
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||||| |||||||||||||||||| | ||||||||| ||||||||||||||    
T  13507974 cttgatttatgtaaaatgtcaaaatgtgataattaaaaaggaacggaggtagta 13508027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 13515162 - 13515215
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||||| |||||||||||||||||| | ||||||||| ||||||||||||||    
T  13515162 cttgatttatgtaaaatgtcaaaatgtgataattaaaaaggaacggaggtagta 13515215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 18344531 - 18344584
Alignment:
Q  2 ttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagtac 55  Q
    |||||||||||||||||| |||| || ||||||||||| |||||||||||||||    
T  18344531 ttgatttgtgtaaaatgttaaaaagtgacaattaaaaatgaacggaggtagtac 18344584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 37609337 - 37609284
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||||| |||||||||||||||||| ||||||||||| |||||||| |||||    
T  37609337 cttgatttatgtaaaatgtcaaaatgtgacaattaaaaaggaacggagatagta 37609284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 51972310 - 51972261
Alignment:
Q  5 atttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||||||||||||||||| ||||||||||||||| ||| |||||||||    
T  51972310 atttgtgtaaaatgtcaaaaagtaacaattaaaaaataacagaggtagta 51972261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 1024765 - 1024813
Alignment:
Q  6 tttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||||||||| ||||||||| ||||||||||| ||||||||||||||    
T  1024765 tttgtgtaaaatatcaaaatgtgacaattaaaaaggaacggaggtagta 1024813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 45368297 - 45368345
Alignment:
Q  6 tttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||||||||||||||||||  |||||||||||||||| |||||||||    
T  45368297 tttgtgtaaaatgtcaaaatgcgacaattaaaaaagaactgaggtagta 45368345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 50825606 - 50825552
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagtac 55  Q
    |||| |||||| |||||||||||| || |||||||||||| ||||||||||||||    
T  50825606 cttggtttgtgaaaaatgtcaaaaagtgacaattaaaaaaaaacggaggtagtac 50825552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 8464290 - 8464237
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| ||| |||||||||||||||||| ||||||||||| ||||||| ||||||    
T  8464290 cttggtttatgtaaaatgtcaaaatgtgacaattaaaaaggaacggaagtagta 8464237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 20605657 - 20605604
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||||||||||| | ||||||||||| ||| ||||||||||    
T  20605657 cttggtttgtgtaaaatgtcaaaatatgacaattaaaaatgaatggaggtagta 20605604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 30686615 - 30686668
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||| |||||| || ||||||||||| ||||||||||||||    
T  30686615 cttggtttgtgtaaaatatcaaaacgtgacaattaaaaaggaacggaggtagta 30686668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 31588773 - 31588720
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||||  ||||||| ||||||||||||||||| ||||||||    
T  31588773 cttggtttgtgtaaaatgctaaaatgtgacaattaaaaaagaacgtaggtagta 31588720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 32168345 - 32168292
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||| |||||| || ||||||||||| ||||||||||||||    
T  32168345 cttggtttgtgtaaaatatcaaaaagtgacaattaaaaaggaacggaggtagta 32168292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 55
Target Start/End: Original strand, 32348187 - 32348235
Alignment:
Q  6 tttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagtac 55  Q
    ||||||||||||||||||| || ||||||||||| |||||||||||||||    
T  32348187 tttgtgtaaaatgtcaaaa-gtgacaattaaaaaggaacggaggtagtac 32348235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 33720721 - 33720774
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||| |||||||||||||||||||||  |||||| ||||||    
T  33720721 cttggtttgtgtaaaatatcaaaatgtaacaattaaaaagaaacggatgtagta 33720774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 37437086 - 37437033
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||||||||||| | ||||||||||| |||| |||||||||    
T  37437086 cttggtttgtgtaaaatgtcaaaatatgacaattaaaaaggaacagaggtagta 37437033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 52759232 - 52759285
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||| || |||||||||| ||||||||||||||||||||| ||||    
T  52759232 cttggtttgtgtataaagtcaaaatgtgacaattaaaaaagaacggagggagta 52759285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 1039105 - 1039061
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacg 45  Q
    ||||||||||||||||||| |||| || |||||||||||||||||    
T  1039105 cttgatttgtgtaaaatgttaaaaagtgacaattaaaaaagaacg 1039061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 1046011 - 1045967
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacg 45  Q
    ||||||||||||||||||| |||| || |||||||||||||||||    
T  1046011 cttgatttgtgtaaaatgttaaaaagtgacaattaaaaaagaacg 1045967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 1429493 - 1429541
Alignment:
Q  6 tttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||||||||| ||||||||| ||||||||||| ||||| ||||||||    
T  1429493 tttgtgtaaaatatcaaaatgtgacaattaaaaaggaacgaaggtagta 1429541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 4100937 - 4100889
Alignment:
Q  6 tttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||||||||| |||||| |||| ||||||||| ||||||||||||||    
T  4100937 tttgtgtaaaatatcaaaaagtaataattaaaaaggaacggaggtagta 4100889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 10676107 - 10676159
Alignment:
Q  2 ttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    ||||||| |||||||||||||||||| | ||||||||| |||| |||||||||    
T  10676107 ttgatttatgtaaaatgtcaaaatgtgataattaaaaaggaacagaggtagta 10676159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 36318561 - 36318609
Alignment:
Q  6 tttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||||||| |||||||| || ||||||||||| ||||||||||||||    
T  36318561 tttgtgtaaattgtcaaaaagtgacaattaaaaaggaacggaggtagta 36318609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 5598249 - 5598295
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacgga 47  Q
    |||| |||||||||||||||||||| | ||||||||||| |||||||    
T  5598249 cttggtttgtgtaaaatgtcaaaatatgacaattaaaaaggaacgga 5598295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 9362177 - 9362227
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggta 51  Q
    |||||||||| ||||||||||||| || ||| ||||||| |||||||||||    
T  9362177 cttgatttgtataaaatgtcaaaaagtgacagttaaaaaggaacggaggta 9362227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 48174706 - 48174656
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggta 51  Q
    ||||||||||||||||| |||||| || | ||||||||| |||||||||||    
T  48174706 cttgatttgtgtaaaatatcaaaaagtgataattaaaaaggaacggaggta 48174656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 51974196 - 51974154
Alignment:
Q  9 gtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggta 51  Q
    |||||||||||||||| || ||||||||||| |||||||||||    
T  51974196 gtgtaaaatgtcaaaaagtgacaattaaaaaggaacggaggta 51974154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 52649762 - 52649708
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagtac 55  Q
    ||||||| ||| |||||||||||| || ||||||||||| |||||||||| ||||    
T  52649762 cttgattagtgaaaaatgtcaaaaagtgacaattaaaaaggaacggaggtggtac 52649708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 52749219 - 52749265
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacgga 47  Q
    ||||||| ||||||||||||||||| |||| |||||||| |||||||    
T  52749219 cttgattcgtgtaaaatgtcaaaatataacgattaaaaatgaacgga 52749265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 19349412 - 19349359
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||||||| ||||| ||||||||||| |||| | |||||||    
T  19349412 cttggtttgtgtaaaatgtcagaatgtgacaattaaaaaggaacagtggtagta 19349359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 35700408 - 35700355
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    ||||||||||||||||| ||| ||  | ||||||||||| ||||||||||||||    
T  35700408 cttgatttgtgtaaaatatcacaaaatgacaattaaaaaggaacggaggtagta 35700355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 48264809 - 48264756
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| ||||| ||||| |||||||||| |||||||||||  |||||||||||||    
T  48264809 cttggtttgtataaaacgtcaaaatgtgacaattaaaaagaaacggaggtagta 48264756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 49497361 - 49497402
Alignment:
Q  6 tttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacgga 47  Q
    ||||| |||||| ||||||||||||||||||||| |||||||    
T  49497361 tttgtataaaatatcaaaatgtaacaattaaaaaggaacgga 49497402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 51613615 - 51613668
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||| | |||| || ||||||||||| ||||||||||||||    
T  51613615 cttggtttgtgtaaaatataaaaaagtgacaattaaaaaggaacggaggtagta 51613668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 42800315 - 42800363
Alignment:
Q  6 tttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    ||||||||||||||||||| || ||||||||||| ||| | ||||||||    
T  42800315 tttgtgtaaaatgtcaaaaagtgacaattaaaaaggaatgaaggtagta 42800363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 44182962 - 44183021
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagtaccatttt 61  Q
    |||| |||||||||||||  ||||||| ||||||||||| ||||||| |||||| ||||||    
T  44182962 cttggtttgtgtaaaatgctaaaatgtgacaattaaaaaggaacgga-gtagtaacatttt 44183021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 8e-21; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 1751468 - 1751413
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagtacc 56  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  1751468 cttgatttgtgtaaaatgtcaaaatgtgacaattaaaaaagaacggaggtagtacc 1751413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 22050252 - 22050305
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  22050252 cttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagta 22050305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 17251292 - 17251233
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagtaccattt 60  Q
    |||| |||||||||||||| |||| || ||||||||||| ||||||||||||||||||||    
T  17251292 cttggtttgtgtaaaatgttaaaaagtgacaattaaaaaggaacggaggtagtaccattt 17251233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 3621794 - 3621847
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||||||||||||| ||||||||||| |||| |||||||||    
T  3621794 cttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacagaggtagta 3621847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 7056177 - 7056124
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||||||||||||||||||||| || ||||||||||| | ||||||||||||    
T  7056177 cttgatttgtgtaaaatgtcaaaaagtgacaattaaaaaggtacggaggtagta 7056124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 24663583 - 24663636
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||||||||||||| ||||||||||| ||||||| ||||||    
T  24663583 cttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggatgtagta 24663636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 30388970 - 30389023
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||||||||||||| | ||||||||| ||||||||||||||    
T  30388970 cttggtttgtgtaaaatgtcaaaatgtgataattaaaaaggaacggaggtagta 30389023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 32359477 - 32359424
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| ||||| |||||| ||||||||||||||||||||| ||||||||||||||    
T  32359477 cttggtttgtataaaatatcaaaatgtaacaattaaaaaggaacggaggtagta 32359424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 19645754 - 19645706
Alignment:
Q  6 tttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    ||||||||||||||||||| || ||||||||||||||||||| ||||||    
T  19645754 tttgtgtaaaatgtcaaaaagtgacaattaaaaaagaacggaagtagta 19645706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 8176637 - 8176696
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagtaccattt 60  Q
    ||||||||||||||||||| |||| || |||||||||||||||| ||| |||||| ||||    
T  8176637 cttgatttgtgtaaaatgttaaaaagtgacaattaaaaaagaacagagatagtactattt 8176696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 11129035 - 11129086
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtag 52  Q
    |||||||||||||||||||||||| || ||||||||||| |||| |||||||    
T  11129035 cttgatttgtgtaaaatgtcaaaaagtgacaattaaaaaggaacagaggtag 11129086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 3850524 - 3850578
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagtac 55  Q
    |||| |||||||||||| ||||||||| |||||||||||  ||||||||||||||    
T  3850524 cttggtttgtgtaaaatatcaaaatgtgacaattaaaaagtaacggaggtagtac 3850578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 11676652 - 11676598
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagtac 55  Q
    |||| |||||||||||| |||||| |||||||||||||| ||| |||||||||||    
T  11676652 cttggtttgtgtaaaatatcaaaaagtaacaattaaaaatgaatggaggtagtac 11676598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 364579 - 364526
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||| ||||||||| |||||||||||  |||||||||||||    
T  364579 cttggtttgtgtaaaatatcaaaatgtgacaattaaaaagaaacggaggtagta 364526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 12732379 - 12732432
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||||| ||||||| ||||||||||| ||||||| ||||||    
T  12732379 cttgttttgtgtaaaatgttaaaatgtgacaattaaaaaggaacggaagtagta 12732432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 17124017 - 17123972
Alignment:
Q  6 tttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggta 51  Q
    |||||||||||||||||||||| ||||||||||| ||| |||||||    
T  17124017 tttgtgtaaaatgtcaaaatgtgacaattaaaaaggaatggaggta 17123972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 34607302 - 34607355
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| ||||| |||||||||||||  ||||||||||||| ||||||||||||||    
T  34607302 cttggtttgtataaaatgtcaaaaattaacaattaaaaaggaacggaggtagta 34607355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 17836097 - 17836153
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagtacca 57  Q
    |||| |||||||||||| |||| |||| ||||||||||| ||||||| |||||||||    
T  17836097 cttggtttgtgtaaaatatcaatatgtgacaattaaaaaggaacggatgtagtacca 17836153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 24949316 - 24949364
Alignment:
Q  6 tttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||||||||| ||||||  ||||||||||||| ||||||||||||||    
T  24949316 tttgtgtaaaatatcaaaaaataacaattaaaaaggaacggaggtagta 24949364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 17193373 - 17193415
Alignment:
Q  12 taaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    ||||||||||||| || ||||||||||| ||||||||||||||    
T  17193373 taaaatgtcaaaacgtgacaattaaaaaggaacggaggtagta 17193415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 23777500 - 23777550
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggta 51  Q
    |||| ||||||||||||||||||| || ||||||||||| ||||| |||||    
T  23777500 cttggtttgtgtaaaatgtcaaaaagtgacaattaaaaaggaacgaaggta 23777550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 33260909 - 33260963
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagtac 55  Q
    |||| ||||||||||||||||||| || ||| ||| ||| |||||||||||||||    
T  33260909 cttggtttgtgtaaaatgtcaaaaagtgacagttataaaggaacggaggtagtac 33260963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 1135209 - 1135164
Alignment:
Q  10 tgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagtac 55  Q
    ||||||||||||||| || ||||||||||| ||||| |||||||||    
T  1135209 tgtaaaatgtcaaaaagtgacaattaaaaaggaacgaaggtagtac 1135164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 23923750 - 23923697
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||| ||||||||||||||| ||||||||||| ||| ||| ||||||    
T  23923750 cttggtttgtgcaaaatgtcaaaatgtgacaattaaaaaggaatggatgtagta 23923697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 26485722 - 26485669
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| ||| ||||||||||||||| || ||||||||||| |||| |||||||||    
T  26485722 cttggtttatgtaaaatgtcaaaaagtgacaattaaaaaggaacagaggtagta 26485669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 31244786 - 31244733
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||  ||||||||| ||||||||||| ||||||| ||||||    
T  31244786 cttggtttgtgtaaaaaatcaaaatgtgacaattaaaaaggaacggatgtagta 31244733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 34379063 - 34379116
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||| |||||| || ||| ||||||| ||||||||||||||    
T  34379063 cttggtttgtgtaaaatatcaaaaagtgacagttaaaaaggaacggaggtagta 34379116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 3e-17; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 18842733 - 18842786
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  18842733 cttgatttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagta 18842786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 35052257 - 35052316
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagtaccattt 60  Q
    |||| |||||||||||||||||||||| ||||||||||| |||||||||||||| |||||    
T  35052257 cttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagtaacattt 35052316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 14228358 - 14228304
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagtac 55  Q
    |||| |||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  14228358 cttggtttgtgtaaaatgtcaaaatgtgacaattaaaaatgaacggaggtagtac 14228304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 11994085 - 11994138
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||    
T  11994085 cttgatttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggatgtagta 11994138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 14263748 - 14263801
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||| |||||    
T  14263748 cttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaagaacggagttagta 14263801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 15596548 - 15596601
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  15596548 cttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagta 15596601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 18291667 - 18291720
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||||| |||||||||||||||||| ||||||||||| ||||||||||||||    
T  18291667 cttgatttttgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagta 18291720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 38128583 - 38128530
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| ||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  38128583 cttggtttgtataaaatgtcaaaatgtaacaattaaaaaggaacggaggtagta 38128530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 8453267 - 8453219
Alignment:
Q  6 tttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  8453267 tttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagta 8453219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 26062911 - 26062963
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagt 53  Q
    ||||||||||||||||||||||||||| ||||||||||| ||| |||||||||    
T  26062911 cttgatttgtgtaaaatgtcaaaatgtgacaattaaaaaggaatggaggtagt 26062963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 29091121 - 29091075
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacgga 47  Q
    |||||||||||||||||||||||| || |||||||||||||||||||    
T  29091121 cttgatttgtgtaaaatgtcaaaaagtgacaattaaaaaagaacgga 29091075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 33935096 - 33935042
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagtac 55  Q
    |||| |||||||||||||||||||||| ||||||||||| ||||| |||||||||    
T  33935096 cttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacgaaggtagtac 33935042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 39303552 - 39303498
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaac-aattaaaaaagaacggaggtagta 54  Q
    ||||||||||||||||||||||||||| || ||||||||| ||||||||||||||    
T  39303552 cttgatttgtgtaaaatgtcaaaatgtgacaaattaaaaaggaacggaggtagta 39303498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 2888504 - 2888451
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||||| ||||||| ||||||||||| ||||||||||||||    
T  2888504 cttggtttgtgtaaaatgttaaaatgtgacaattaaaaaggaacggaggtagta 2888451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 8554052 - 8553999
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    ||||||||||||||||||||||||||| |||||| |||| ||||| ||||||||    
T  8554052 cttgatttgtgtaaaatgtcaaaatgtgacaattgaaaaggaacgaaggtagta 8553999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 55
Target Start/End: Original strand, 13328179 - 13328228
Alignment:
Q  6 tttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagtac 55  Q
    |||||||||||||||||||||| ||||||||||| |||||||| ||||||    
T  13328179 tttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggagatagtac 13328228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 25703614 - 25703561
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||||||||||||| |||||||||||  |||||||||||||    
T  25703614 cttgttttgtgtaaaatgtcaaaatgtgacaattaaaaagaaacggaggtagta 25703561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 25812785 - 25812732
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||||||||||||| |||||||||||  |||||||||||||    
T  25812785 cttgttttgtgtaaaatgtcaaaatgtgacaattaaaaagaaacggaggtagta 25812732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 38482828 - 38482775
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||| ||||||||| ||||||||||| ||||||||||||||    
T  38482828 cttggtttgtgtaaaatatcaaaatgtgacaattaaaaaggaacggaggtagta 38482775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 34982038 - 34982086
Alignment:
Q  6 tttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||||||||| ||||||||| ||||||||||| ||||||||||||||    
T  34982038 tttgtgtaaaatatcaaaatgtgacaattaaaaaggaacggaggtagta 34982086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 17074618 - 17074568
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggta 51  Q
    |||| |||||||||||||| ||||||| ||||||||||| |||||||||||    
T  17074618 cttggtttgtgtaaaatgttaaaatgtgacaattaaaaaggaacggaggta 17074568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 17573652 - 17573702
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggta 51  Q
    |||| |||||||||||||| ||||||| ||||||||||| |||||||||||    
T  17573652 cttggtttgtgtaaaatgttaaaatgtgacaattaaaaaggaacggaggta 17573702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 23430113 - 23430167
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagtac 55  Q
    ||||||||||||||||||| ||||||| || |||||||| ||| |||||||||||    
T  23430113 cttgatttgtgtaaaatgttaaaatgtgacgattaaaaaggaatggaggtagtac 23430167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 27911708 - 27911654
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagtac 55  Q
    ||||||||||||||||||||||||  ||||| ||||||| | |||||||||||||    
T  27911708 cttgatttgtgtaaaatgtcaaaaaataacacttaaaaaggtacggaggtagtac 27911654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 27958127 - 27958073
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagtac 55  Q
    ||||||||||||||||||||||||  ||||| ||||||| | |||||||||||||    
T  27958127 cttgatttgtgtaaaatgtcaaaaaataacacttaaaaaggtacggaggtagtac 27958073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 6757610 - 6757663
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||||||||||||||||||||| || ||| | ||||| ||||||||||||||    
T  6757610 cttgatttgtgtaaaatgtcaaaaagtgacagtaaaaaaggaacggaggtagta 6757663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 14061185 - 14061132
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||||| |||| || ||||||||||| ||||||||||||||    
T  14061185 cttggtttgtgtaaaatgttaaaaagtgacaattaaaaaggaacggaggtagta 14061132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 23848592 - 23848539
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| ||||||| |||||||||||||| ||||||||||| |||| |||||||||    
T  23848592 cttggtttgtgtcaaatgtcaaaatgtgacaattaaaaaggaacagaggtagta 23848539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 26740173 - 26740120
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| ||||||||||||||||||| || ||||||||||| ||||| ||||||||    
T  26740173 cttggtttgtgtaaaatgtcaaaaagtgacaattaaaaaggaacgaaggtagta 26740120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 17313355 - 17313399
Alignment:
Q  10 tgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    ||||| |||||||||||||||||||||||  ||||||||||||||    
T  17313355 tgtaagatgtcaaaatgtaacaattaaaagggaacggaggtagta 17313399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 27518740 - 27518696
Alignment:
Q  10 tgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    ||||||||||||||||||||| |||||||||||| | ||||||||    
T  27518740 tgtaaaatgtcaaaatgtaactattaaaaaagaaagaaggtagta 27518696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 35052327 - 35052379
Alignment:
Q  2 ttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||||||||||||||||  || || ||| ||||||||||||||||||||||    
T  35052327 ttgatttgtgtaaaatgtcttaaagtgacacttaaaaaagaacggaggtagta 35052379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 4057492 - 4057535
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaac 44  Q
    |||| |||||||||||||||||||||| ||||||||||| ||||    
T  4057492 cttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaac 4057535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 16656904 - 16656955
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtag 52  Q
    |||| |||||||||||||||||||||| |||||||||||  |||||| ||||    
T  16656904 cttggtttgtgtaaaatgtcaaaatgtgacaattaaaaagaaacggatgtag 16656955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 1202480 - 1202442
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaa 39  Q
    ||||||||||||||||||| ||||||| |||||||||||    
T  1202480 cttgatttgtgtaaaatgttaaaatgtgacaattaaaaa 1202442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 1245516 - 1245562
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacgga 47  Q
    |||||||| ||||||||||||||| || ||||||||||| |||||||    
T  1245516 cttgatttatgtaaaatgtcaaaaagtgacaattaaaaaggaacgga 1245562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 34047055 - 34047093
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaa 39  Q
    |||| |||||||||||||||||||||| |||||||||||    
T  34047055 cttggtttgtgtaaaatgtcaaaatgtgacaattaaaaa 34047093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 35296248 - 35296302
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagtac 55  Q
    |||| |||||||||||| |||||| || ||| ||||||| |||||||||||||||    
T  35296248 cttggtttgtgtaaaatatcaaaaagtgacagttaaaaaggaacggaggtagtac 35296302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 10180574 - 10180627
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||||| |||||||||||||||| | |||||||||||  |||||| ||||||    
T  10180574 cttgatttatgtaaaatgtcaaaatatgacaattaaaaagaaacggatgtagta 10180627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 13174133 - 13174186
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| ||||||||||||||||||| || ||| ||||||| ||||||||| ||||    
T  13174133 cttggtttgtgtaaaatgtcaaaaagtgacagttaaaaaggaacggagggagta 13174186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 19972483 - 19972536
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| ||||||||||||||||||| || ||  ||||||| ||||||||||||||    
T  19972483 cttggtttgtgtaaaatgtcaaaaagtgaccgttaaaaaggaacggaggtagta 19972536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 21020350 - 21020297
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| ||||||||||||||||||| || ||  ||||||| ||||||||||||||    
T  21020350 cttggtttgtgtaaaatgtcaaaaagtgaccgttaaaaaggaacggaggtagta 21020297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 21651782 - 21651729
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| ||| |||||||||||||||||| |||||||||||  ||||||| |||||    
T  21651782 cttggtttatgtaaaatgtcaaaatgtgacaattaaaaagaaacggagttagta 21651729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 35029751 - 35029804
Alignment:
Q  2 ttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagtac 55  Q
    ||||||||| |||||||| ||||  | ||||||||||| |||||||||||||||    
T  35029751 ttgatttgtataaaatgttaaaaaatgacaattaaaaaggaacggaggtagtac 35029804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 36058440 - 36058489
Alignment:
Q  5 atttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||||||||  ||||||||||| |||||||| |||||    
T  36058440 atttatgtaaaatgtcaaaatgcgacaattaaaaaggaacggagatagta 36058489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 41701518 - 41701465
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    ||||||||||||||||| | |||| || ||| ||||||| ||||||||||||||    
T  41701518 cttgatttgtgtaaaatattaaaaagtgacagttaaaaaggaacggaggtagta 41701465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 45281414 - 45281361
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||||| ||||||| ||||||||||  |||||||| |||||    
T  45281414 cttggtttgtgtaaaatgttaaaatgtgacaattaaaagggaacggagctagta 45281361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 45317856 - 45317901
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacgg 46  Q
    |||| ||||||||||| |||||||||| ||||||||||| ||||||    
T  45317856 cttggtttgtgtaaaaagtcaaaatgtgacaattaaaaaggaacgg 45317901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 2456150 - 2456098
Alignment:
Q  2 ttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    ||||||| |||||||||||||||||| || ||||||||  | |||||||||||    
T  2456150 ttgatttatgtaaaatgtcaaaatgtgacgattaaaaagaatcggaggtagta 2456098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 3720889 - 3720937
Alignment:
Q  6 tttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||||||||||| |||| || ||||||||||| |||||||| |||||    
T  3720889 tttgtgtaaaatgttaaaaagtgacaattaaaaaggaacggagatagta 3720937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 7483951 - 7483999
Alignment:
Q  6 tttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||||||||| |||||| || ||| ||||||| ||||||||||||||    
T  7483951 tttgtgtaaaatatcaaaaagtgacagttaaaaaggaacggaggtagta 7483999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 40228499 - 40228559
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagtaccatttt 61  Q
    |||| ||||||||||| |||||||||| ||||||||||| ||| | | |||||| ||||||    
T  40228499 cttggtttgtgtaaaacgtcaaaatgtgacaattaaaaaggaatgaaagtagtatcatttt 40228559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 41308109 - 41308153
Alignment:
Q  10 tgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||||||||||||| | |||||||||||  |||||||||||||    
T  41308109 tgtaaaatgtcaaaatatgacaattaaaaagaaacggaggtagta 41308153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 41643521 - 41643473
Alignment:
Q  6 tttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||||||||||||||||  | ||||||||||| |||||||| |||||    
T  41643521 tttgtgtaaaatgtcaaaaaattacaattaaaaatgaacggagatagta 41643473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 3e-17; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 17896530 - 17896477
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  17896530 cttgatttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagta 17896477  T

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Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 8265153 - 8265206
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  8265153 cttggtttgtgtaaaatttcaaaatgtgacaattaaaaaagaacggaggtagta 8265206  T

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Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 33099874 - 33099821
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  33099874 cttggtttgtgtaaaatatcaaaatgtgacaattaaaaaagaacggaggtagta 33099821  T

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Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 5732112 - 5732059
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| ||| |||||||||||||||||| ||||||||||| ||||||||||||||    
T  5732112 cttggtttatgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagta 5732059  T

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Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 8382030 - 8382083
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||||||||||||| | ||||||||| ||||||||||||||    
T  8382030 cttggtttgtgtaaaatgtcaaaatgtgataattaaaaaggaacggaggtagta 8382083  T

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Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 10227460 - 10227513
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    ||||||||||||||||||| |||| || ||||||||||| ||||||||||||||    
T  10227460 cttgatttgtgtaaaatgttaaaaagtgacaattaaaaaggaacggaggtagta 10227513  T

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Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 31430763 - 31430816
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||||||||||||| ||||||||||| |||| |||||||||    
T  31430763 cttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacagaggtagta 31430816  T

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Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 32528367 - 32528314
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||||||| |||||||||||||| | ||||||||||| ||||||||||||||    
T  32528367 cttgatttgtataaaatgtcaaaatatgacaattaaaaatgaacggaggtagta 32528314  T

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Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 33258086 - 33258139
Alignment:
Q  2 ttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagtac 55  Q
    |||||||||||||||||||||||  | ||||||||||| |||||||||||||||    
T  33258086 ttgatttgtgtaaaatgtcaaaaaatgacaattaaaaaggaacggaggtagtac 33258139  T

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Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 36298212 - 36298171
Alignment:
Q  2 ttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaa 43  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  36298212 ttgatttgtgtaaaatgtcaaaatgtgacaattaaaaaagaa 36298171  T

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Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 47408317 - 47408370
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| ||||||||||||||||||| || ||||||||||| ||||||||||||||    
T  47408317 cttggtttgtgtaaaatgtcaaaaagtgacaattaaaaaggaacggaggtagta 47408370  T

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Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 47459842 - 47459895
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    ||||||||||||||||| ||||||  ||||||||||||| ||||||||||||||    
T  47459842 cttgatttgtgtaaaatatcaaaaaataacaattaaaaaggaacggaggtagta 47459895  T

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Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 33174020 - 33174064
Alignment:
Q  10 tgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||    
T  33174020 tgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagta 33174064  T

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Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 35860169 - 35860216
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggag 48  Q
    |||| ||||||||||| |||||||||||||||||||||| ||||||||    
T  35860169 cttggtttgtgtaaaaagtcaaaatgtaacaattaaaaaggaacggag 35860216  T

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Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 22950857 - 22950807
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggta 51  Q
    |||| |||||||||||||||||||| ||||||||||||| |||| ||||||    
T  22950857 cttggtttgtgtaaaatgtcaaaatataacaattaaaaaggaacagaggta 22950807  T

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Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 32966084 - 32966038
Alignment:
Q  5 atttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggta 51  Q
    ||||||||||||||| ||||||| ||||||||||| |||||||||||    
T  32966084 atttgtgtaaaatgttaaaatgtgacaattaaaaaggaacggaggta 32966038  T

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Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 6799623 - 6799676
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| ||| ||||||||||||| |||| ||||||||||| ||||||||||||||    
T  6799623 cttggtttatgtaaaatgtcaacatgtgacaattaaaaaggaacggaggtagta 6799676  T

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Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 7312821 - 7312874
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    ||||||||||||||||| ||||||||| ||||||| ||| ||||| ||||||||    
T  7312821 cttgatttgtgtaaaatatcaaaatgtgacaattacaaaggaacgaaggtagta 7312874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 12838117 - 12838064
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||| ||||||||| ||||||||||| || |||||||||||    
T  12838117 cttggtttgtgtaaaatatcaaaatgtgacaattaaaaaggatcggaggtagta 12838064  T

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Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 36922444 - 36922493
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggt 50  Q
    |||||||| | |||||||||||||||| ||||||||||| ||||||||||    
T  36922444 cttgatttatttaaaatgtcaaaatgtgacaattaaaaaggaacggaggt 36922493  T

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Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 41675226 - 41675173
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| ||| |||||||||||||||||| ||||||||||| |||| |||||||||    
T  41675226 cttggtttatgtaaaatgtcaaaatgtgacaattaaaaaggaacagaggtagta 41675173  T

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Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 41891474 - 41891527
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||||||||||||| ||||||||||| | || |||||||||    
T  41891474 cttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggcacagaggtagta 41891527  T

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Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 33921804 - 33921760
Alignment:
Q  10 tgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||||||| ||||||| ||||||||||| ||||||||||||||    
T  33921804 tgtaaaatgttaaaatgtgacaattaaaaaggaacggaggtagta 33921760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 46715351 - 46715308
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaac 44  Q
    |||||||||||||||| |||||||||| ||||||||||| ||||    
T  46715351 cttgatttgtgtaaaaagtcaaaatgtgacaattaaaaaggaac 46715308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 3310409 - 3310463
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagtac 55  Q
    |||| |||| ||||||||||||||| | ||| ||||||| |||||||||||||||    
T  3310409 cttggtttgcgtaaaatgtcaaaatatgacagttaaaaaggaacggaggtagtac 3310463  T

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Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 9601932 - 9601886
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacgga 47  Q
    |||| ||||||||||| |||||||||| ||||||||||| |||||||    
T  9601932 cttggtttgtgtaaaaagtcaaaatgtgacaattaaaaaggaacgga 9601886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 9829503 - 9829457
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacgga 47  Q
    |||| ||||||||||| |||||||||| ||||||||||| |||||||    
T  9829503 cttggtttgtgtaaaaagtcaaaatgtgacaattaaaaaggaacgga 9829457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 30866775 - 30866721
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagtac 55  Q
    |||| |||||||||||||||||||  | ||| ||||||| |||||||||||||||    
T  30866775 cttggtttgtgtaaaatgtcaaaaaatgacagttaaaaaggaacggaggtagtac 30866721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 31815108 - 31815058
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggta 51  Q
    ||||||||||||||||||| ||||  | ||||||||||| |||||||||||    
T  31815108 cttgatttgtgtaaaatgttaaaaaatgacaattaaaaaggaacggaggta 31815058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 39
Target Start/End: Complemental strand, 7477228 - 7477199
Alignment:
Q  10 tgtaaaatgtcaaaatgtaacaattaaaaa 39  Q
    ||||||||||||||||||||||||||||||    
T  7477228 tgtaaaatgtcaaaatgtaacaattaaaaa 7477199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 26724128 - 26724177
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaa-tgtaacaattaaaaaagaacggagg 49  Q
    |||| ||||||||||||||||||| ||| ||||||||||| |||||||||    
T  26724128 cttggtttgtgtaaaatgtcaaaaatgtgacaattaaaaaggaacggagg 26724177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 28608798 - 28608851
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    ||||||||||||||||| ||||||| | ||||||||||| |||| || ||||||    
T  28608798 cttgatttgtgtaaaatatcaaaatatgacaattaaaaaggaacagatgtagta 28608851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 42841905 - 42841852
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||| |||||| || ||||||||||| ||||||| ||||||    
T  42841905 cttggtttgtgtaaaatatcaaaaagtgacaattaaaaaggaacggatgtagta 42841852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 3e-17; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 31803510 - 31803563
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  31803510 cttgatttgtgtaaaatgtcaaaaagtgacaattaaaaaagaacggaggtagta 31803563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 25344146 - 25344200
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagtac 55  Q
    |||||||||||||||||| |||||||| ||||||||||| |||||||||||||||    
T  25344146 cttgatttgtgtaaaatgacaaaatgtgacaattaaaaaggaacggaggtagtac 25344200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 2674011 - 2673958
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  2674011 cttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagta 2673958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 4175513 - 4175460
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  4175513 cttgctttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagta 4175460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 8825243 - 8825296
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    ||||||||||||||||||||||||||| | ||||||||| ||||||||||||||    
T  8825243 cttgatttgtgtaaaatgtcaaaatgtgataattaaaaaggaacggaggtagta 8825296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 38910459 - 38910512
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  38910459 cttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagta 38910512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 18000523 - 18000571
Alignment:
Q  6 tttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  18000523 tttgtgtaaaatgtcaaaaggtaacaattaaaaaggaacggaggtagta 18000571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 4985201 - 4985154
Alignment:
Q  8 tgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagtac 55  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||    
T  4985201 tgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagtac 4985154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 6754212 - 6754159
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||||||||||||| ||||||||||| ||||||| ||||||    
T  6754212 cttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaagtagta 6754159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 18794969 - 18795022
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    ||||||||||||||||||||||| ||| | ||||||||| ||||||||||||||    
T  18794969 cttgatttgtgtaaaatgtcaaagtgtgaaaattaaaaaggaacggaggtagta 18795022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 36239644 - 36239697
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||| |||||||||||||||||||| ||||||||||| |||||||| |||||    
T  36239644 cttgatatgtgtaaaatgtcaaaatgtgacaattaaaaatgaacggagatagta 36239697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 39073230 - 39073283
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||| ||||||||| ||||||||||| ||||||||||||||    
T  39073230 cttggtttgtgtaaaatatcaaaatgtgacaattaaaaaggaacggaggtagta 39073283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 40198974 - 40199027
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||| |||||||||| |||||| ||||||||||||||||||||||| |||||    
T  40198974 cttgatctgtgtaaaatatcaaaaagtaacaattaaaaaagaacggagatagta 40199027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 7579695 - 7579647
Alignment:
Q  6 tttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||||||||| ||||||||| ||||||||||| ||||||||||||||    
T  7579695 tttgtgtaaaatatcaaaatgtgacaattaaaaaggaacggaggtagta 7579647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 9127375 - 9127331
Alignment:
Q  10 tgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||    
T  9127375 tgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagta 9127331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 14793818 - 14793770
Alignment:
Q  6 tttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||||||||||||||||||| ||||||||||| ||| ||||||||||    
T  14793818 tttgtgtaaaatgtcaaaatgtgacaattaaaaaggaagggaggtagta 14793770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 16124284 - 16124240
Alignment:
Q  10 tgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||    
T  16124284 tgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagta 16124240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 38017305 - 38017257
Alignment:
Q  6 tttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||||||||||| ||||||| ||||||||||||||||| ||||||||    
T  38017305 tttgtgtaaaatgttaaaatgtgacaattaaaaaagaacgaaggtagta 38017257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 38363375 - 38363435
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagtaccatttt 61  Q
    |||| |||||||||||||||||| ||| ||||||||||| ||||| |||||||| ||||||    
T  38363375 cttggtttgtgtaaaatgtcaaattgtgacaattaaaaaggaacgaaggtagtatcatttt 38363435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 1297759 - 1297717
Alignment:
Q  12 taaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||||||||||||||||||||||||| ||| ||||||||||    
T  1297759 taaaatgtcaaaatgtaacaattaaaaaggaatggaggtagta 1297717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 4427438 - 4427384
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagtac 55  Q
    ||||||| ||||||||| |||||| || ||||||||||| |||||||||||||||    
T  4427438 cttgattcgtgtaaaatatcaaaaagtgacaattaaaaaggaacggaggtagtac 4427384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 13703283 - 13703337
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagtac 55  Q
    ||||||||||||||||| |||||| || ||||||||||| |||||||| ||||||    
T  13703283 cttgatttgtgtaaaatatcaaaaagtgacaattaaaaaggaacggagatagtac 13703337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 38502832 - 38502774
Alignment:
Q  6 tttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagtaccattttgga 64  Q
    |||||||||||||| |||||||||||||||||||  ||| |||||||||  ||||||||    
T  38502832 tttgtgtaaaatgttaaaatgtaacaattaaaaagaaacagaggtagtagtattttgga 38502774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 1087966 - 1087913
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||||| ||||||| |||||||||||  |||||||||||||    
T  1087966 cttggtttgtgtaaaatgttaaaatgtgacaattaaaaagaaacggaggtagta 1087913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 1795150 - 1795101
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggt 50  Q
    |||||||||||||||||||||||| |||||  ||||||| ||||||||||    
T  1795150 cttgatttgtgtaaaatgtcaaaaagtaaccgttaaaaaggaacggaggt 1795101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 4017600 - 4017653
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||||||||||||||||||||| || ||||||||||| ||| ||| ||||||    
T  4017600 cttgatttgtgtaaaatgtcaaaaagtgacaattaaaaaggaatggatgtagta 4017653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 4098517 - 4098570
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||||||||||||| |||||||||||  ||||||| |||||    
T  4098517 cttggtttgtgtaaaatgtcaaaatgtgacaattaaaaagaaacggagatagta 4098570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 26854128 - 26854075
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||||||||||||| ||||||||||| ||||| | ||||||    
T  26854128 cttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacgaatgtagta 26854075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 18437351 - 18437303
Alignment:
Q  6 tttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||||||||| |||||| || ||||||||||| ||||||||||||||    
T  18437351 tttgtgtaaaatatcaaaaagtgacaattaaaaaggaacggaggtagta 18437303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 28024284 - 28024240
Alignment:
Q  9 gtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagt 53  Q
    ||||||||||||||||| | ||||||||||| |||||||||||||    
T  28024284 gtgtaaaatgtcaaaatatgacaattaaaaaggaacggaggtagt 28024240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 30368163 - 30368115
Alignment:
Q  6 tttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||||||||||| |||||||||||||||||||| ||  |||||||||    
T  30368163 tttgtgtaaaatgttaaaatgtaacaattaaaaaataaatgaggtagta 30368115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 3892997 - 3893044
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggag 48  Q
    ||||||||||||||||||||||||  |||||||||||||  |||||||    
T  3892997 cttgatttgtgtaaaatgtcaaaaaataacaattaaaaagaaacggag 3893044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 47
Target Start/End: Complemental strand, 18020794 - 18020755
Alignment:
Q  8 tgtgtaaaatgtcaaaatgtaacaattaaaaaagaacgga 47  Q
    |||||||||||||||||||| ||||||||||| |||||||    
T  18020794 tgtgtaaaatgtcaaaatgtgacaattaaaaaggaacgga 18020755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 9076257 - 9076311
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagtac 55  Q
    |||| |||||||||||||||||| | | ||||||||||| ||||| |||||||||    
T  9076257 cttggtttgtgtaaaatgtcaaattatgacaattaaaaaggaacgaaggtagtac 9076311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 10889221 - 10889167
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagtac 55  Q
    |||| ||| |||||||||| ||||||| |||||||||||  ||||||||||||||    
T  10889221 cttggtttatgtaaaatgttaaaatgtgacaattaaaaagaaacggaggtagtac 10889167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 12665044 - 12665094
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggta 51  Q
    |||| ||| |||||||||||||||| | ||||||||||| |||||||||||    
T  12665044 cttggtttatgtaaaatgtcaaaatatgacaattaaaaaggaacggaggta 12665094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 12869932 - 12869882
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggta 51  Q
    |||| ||||| |||||| ||||||||| ||||||||||| |||||||||||    
T  12869932 cttggtttgtataaaatatcaaaatgtgacaattaaaaatgaacggaggta 12869882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 38308159 - 38308105
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagtac 55  Q
    |||| ||||||||||||||||||| || ||  ||||||| |||||||||||||||    
T  38308159 cttggtttgtgtaaaatgtcaaaaagtgaccgttaaaaaggaacggaggtagtac 38308105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 425310 - 425362
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    ||||||||||||||||||||||||  | ||| ||||||| ||||||||||||||    
T  425310 cttgatttgtgtaaaatgtcaaaa-atgacagttaaaaaggaacggaggtagta 425362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 6072642 - 6072691
Alignment:
Q  5 atttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||||||||||||  |||||| | ||||||||| ||||||||||||||    
T  6072642 atttgtgtaaaatgtttaaatgtgataattaaaaaggaacggaggtagta 6072691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 6689786 - 6689831
Alignment:
Q  2 ttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacgga 47  Q
    |||||||||||||||||| ||||  ||||||||||||| |||||||    
T  6689786 ttgatttgtgtaaaatgtaaaaaaataacaattaaaaaggaacgga 6689831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 39
Target Start/End: Complemental strand, 10359263 - 10359230
Alignment:
Q  6 tttgtgtaaaatgtcaaaatgtaacaattaaaaa 39  Q
    |||||||||||||||||||||| |||||||||||    
T  10359263 tttgtgtaaaatgtcaaaatgtgacaattaaaaa 10359230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 12722992 - 12722939
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| ||||||||||||||||||| || | ||||||||| |||| |||||||||    
T  12722992 cttggtttgtgtaaaatgtcaaaaagtgagaattaaaaaggaacagaggtagta 12722939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 12784476 - 12784423
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| ||||||||||||||||||| || | ||||||||| |||| |||||||||    
T  12784476 cttggtttgtgtaaaatgtcaaaaagtgagaattaaaaaggaacagaggtagta 12784423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 22582658 - 22582710
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||||||| |||||||||||||||| |  |||||||| ||||||||||||||    
T  22582658 cttgatttgtataaaatgtcaaaatgtga-tattaaaaaggaacggaggtagta 22582710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 39
Target Start/End: Complemental strand, 24074866 - 24074833
Alignment:
Q  6 tttgtgtaaaatgtcaaaatgtaacaattaaaaa 39  Q
    |||||||||||||||||||||| |||||||||||    
T  24074866 tttgtgtaaaatgtcaaaatgtgacaattaaaaa 24074833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 28447018 - 28446965
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| ||||||||||||||||||| || |||||||||||  ||||||| |||||    
T  28447018 cttggtttgtgtaaaatgtcaaaaagtgacaattaaaaagaaacggagatagta 28446965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 34261498 - 34261551
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| ||||| |||||||||||||| | ||||||||||| |||| |||||||||    
T  34261498 cttggtttgtctaaaatgtcaaaatatgacaattaaaaaggaacagaggtagta 34261551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 37809945 - 37809998
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||| |||||| || ||||||||||| || |||||||||||    
T  37809945 cttggtttgtgtaaaatatcaaaaagtgacaattaaaaaggatcggaggtagta 37809998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 42911736 - 42911788
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||| ||||||||| ||||||||||| |||| |||||||||    
T  42911736 cttggtttgtgtaaaatatcaaaatgtgacaattaaaaaggaac-gaggtagta 42911788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 9958915 - 9958863
Alignment:
Q  2 ttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||||||||||| ||||||||  | ||||||||||| ||||| ||||||||    
T  9958915 ttgatttgtgtaaattgtcaaaaaatgacaattaaaaatgaacgaaggtagta 9958863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 39893837 - 39893789
Alignment:
Q  6 tttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||||||||||| |||| || ||||||||||| ||||||| ||||||    
T  39893837 tttgtgtaaaatgttaaaaagtgacaattaaaaaggaacggatgtagta 39893789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 5e-16; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 35232335 - 35232280
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagtacc 56  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  35232335 cttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaagaacggatgtagtacc 35232280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 9834487 - 9834540
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  9834487 cttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagta 9834540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 22828438 - 22828385
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  22828438 cttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagta 22828385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 55
Target Start/End: Complemental strand, 33751375 - 33751326
Alignment:
Q  6 tttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagtac 55  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  33751375 tttgtgtaaaatgtcaaaatgtaacaattaaaaaggaacggagatagtac 33751326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 44013950 - 44013897
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  44013950 cttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagta 44013897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 44217913 - 44217966
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  44217913 cttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagta 44217966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 52061765 - 52061818
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    ||||||||||||||||||||||||| | ||||||||||| ||||||||||||||    
T  52061765 cttgatttgtgtaaaatgtcaaaatatgacaattaaaaaggaacggaggtagta 52061818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 8735596 - 8735650
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagtac 55  Q
    |||| |||||||||||| ||||||||| ||||||||||| |||||||||||||||    
T  8735596 cttggtttgtgtaaaatatcaaaatgtgacaattaaaaaggaacggaggtagtac 8735650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 35231901 - 35231947
Alignment:
Q  5 atttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggta 51  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||    
T  35231901 atttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggta 35231947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 354173 - 354226
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| ||| |||||||||||||||||| ||||||||||| ||||||||||||||    
T  354173 cttggtttatgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagta 354226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 13629230 - 13629177
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||||||||||||| ||||||||||| |||| |||||||||    
T  13629230 cttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacagaggtagta 13629177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 38009803 - 38009750
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| ||||||||||| |||||||||| ||||||||||| ||||||||||||||    
T  38009803 cttggtttgtgtaaaaagtcaaaatgtgacaattaaaaaggaacggaggtagta 38009750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 44069238 - 44069291
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||||||||||||| |||||||||||  |||||||||||||    
T  44069238 cttggtttgtgtaaaatgtcaaaatgtgacaattaaaaagaaacggaggtagta 44069291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 55
Target Start/End: Complemental strand, 52677198 - 52677149
Alignment:
Q  6 tttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagtac 55  Q
    |||||||||||||||||||||| ||||||||||| ||| |||||||||||    
T  52677198 tttgtgtaaaatgtcaaaatgtgacaattaaaaaggaatggaggtagtac 52677149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 53599823 - 53599770
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||||| ||||||| ||||||||||| ||||||||||||||    
T  53599823 cttggtttgtgtaaaatgttaaaatgtgacaattaaaaaggaacggaggtagta 53599770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 56576141 - 56576088
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| ||||||||||| |||||||||| ||||||||||| ||||||||||||||    
T  56576141 cttggtttgtgtaaaacgtcaaaatgtgacaattaaaaaggaacggaggtagta 56576088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 16464814 - 16464766
Alignment:
Q  6 tttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||||||||||||||||||| |||| |||||| ||||||||||||||    
T  16464814 tttgtgtaaaatgtcaaaatgtgacaactaaaaaggaacggaggtagta 16464766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 38617341 - 38617293
Alignment:
Q  6 tttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||||||||| ||||||||| ||||||||||| ||||||||||||||    
T  38617341 tttgtgtaaaatatcaaaatgtgacaattaaaaaggaacggaggtagta 38617293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 54231746 - 54231797
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtag 52  Q
    ||||||||||||||||||||||||  | ||||||||||| ||||||||||||    
T  54231746 cttgatttgtgtaaaatgtcaaaaaatgacaattaaaaaggaacggaggtag 54231797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 22678335 - 22678293
Alignment:
Q  12 taaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||||||||||||| ||||||||||| ||||||||||||||    
T  22678335 taaaatgtcaaaatgtgacaattaaaaatgaacggaggtagta 22678293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 42513063 - 42513009
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaa-tgtaacaattaaaaaagaacggaggtagta 54  Q
    ||||||||||||||||| |||||| ||| ||||||||||| ||||||||||||||    
T  42513063 cttgatttgtgtaaaatttcaaaaatgtgacaattaaaaatgaacggaggtagta 42513009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 47751742 - 47751796
Alignment:
Q  6 tttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagtaccattt 60  Q
    |||||||||||||||| || || ||||||||||| |||| |||||||||||||||    
T  47751742 tttgtgtaaaatgtcacaaagtgacaattaaaaaggaactgaggtagtaccattt 47751796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 48782406 - 48782452
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacgga 47  Q
    |||| |||||||||||||||||||||| ||||||||||| |||||||    
T  48782406 cttggtttgtgtaaaatgtcaaaatgtgacaattaaaaatgaacgga 48782452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 12252299 - 12252352
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||||| |||||||||||||||| | ||| ||||||| ||||||||||||||    
T  12252299 cttgatttatgtaaaatgtcaaaatatgacagttaaaaaggaacggaggtagta 12252352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 18091449 - 18091502
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||| || |||||||||| ||||||||||||||||||||| ||||    
T  18091449 cttggtttgtgtataaagtcaaaatgtgacaattaaaaaagaacggagggagta 18091502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 19093190 - 19093141
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggt 50  Q
    |||| ||| |||||||||||||||||| ||||||||||| ||||||||||    
T  19093190 cttggtttatgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggt 19093141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 23237842 - 23237883
Alignment:
Q  6 tttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacgga 47  Q
    |||||||||||||| ||||||||||||||||||| |||||||    
T  23237842 tttgtgtaaaatgttaaaatgtaacaattaaaaaggaacgga 23237883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 29511250 - 29511303
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| ||| ||||||||||||||| || ||||||||||| ||||||||||||||    
T  29511250 cttggtttatgtaaaatgtcaaaaggtgacaattaaaaatgaacggaggtagta 29511303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 36659464 - 36659411
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    ||||||||||||||||||||||||  | |||||||| || ||||||||||||||    
T  36659464 cttgatttgtgtaaaatgtcaaaaaatgacaattaagaaggaacggaggtagta 36659411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 39671532 - 39671585
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||||||| ||||| ||||||||| | ||||||||||||||    
T  39671532 cttggtttgtgtaaaatgtcataatgtgacaattaaataggaacggaggtagta 39671585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 39683751 - 39683698
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||||| ||||||| | ||||||||| ||||||||||||||    
T  39683751 cttggtttgtgtaaaatgtgaaaatgtgataattaaaaaggaacggaggtagta 39683698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 47428726 - 47428779
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||||| |||||||| ||||||||| ||||||||||| ||||||| ||||||    
T  47428726 cttgatttatgtaaaatatcaaaatgtgacaattaaaaaggaacggatgtagta 47428779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 55935314 - 55935367
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    ||||||||||||||||| |||||| || ||| ||||||| ||||||||||||||    
T  55935314 cttgatttgtgtaaaatatcaaaaagtgacagttaaaaaggaacggaggtagta 55935367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 23719812 - 23719768
Alignment:
Q  10 tgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||||||||||||  ||||||||||||| ||||||||||||||    
T  23719812 tgtaaaatgtcaaaaaataacaattaaaaaggaacggaggtagta 23719768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 26620383 - 26620335
Alignment:
Q  6 tttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||| ||||||||||||||| ||||||||||| |||||||| |||||    
T  26620383 tttgtgcaaaatgtcaaaatgtgacaattaaaaaggaacggagttagta 26620335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 33755059 - 33755015
Alignment:
Q  10 tgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||||||| ||||||| ||||||||||| ||||||||||||||    
T  33755059 tgtaaaatgttaaaatgtgacaattaaaaaggaacggaggtagta 33755015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 45725748 - 45725796
Alignment:
Q  6 tttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||||||||||||||||  | ||||||||||| ||||||||||||||    
T  45725748 tttgtgtaaaatgtcaaaaaatgacaattaaaaaggaacggaggtagta 45725796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 5374387 - 5374336
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtag 52  Q
    |||||||||| |||||||||||||| | |||||||||||  |||||||||||    
T  5374387 cttgatttgtataaaatgtcaaaatatgacaattaaaaagaaacggaggtag 5374336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 48
Target Start/End: Original strand, 34464488 - 34464531
Alignment:
Q  5 atttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggag 48  Q
    |||||| |||||| ||||||||||||||||||||| ||||||||    
T  34464488 atttgtataaaatatcaaaatgtaacaattaaaaaggaacggag 34464531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 54
Target Start/End: Original strand, 36408969 - 36409012
Alignment:
Q  11 gtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    ||||||||||||||| | ||||||||||| ||||||||||||||    
T  36408969 gtaaaatgtcaaaatatgacaattaaaaaggaacggaggtagta 36409012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 54
Target Start/End: Original strand, 36423135 - 36423178
Alignment:
Q  11 gtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    ||||||||||||||| | ||||||||||| ||||||||||||||    
T  36423135 gtaaaatgtcaaaatatgacaattaaaaaggaacggaggtagta 36423178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 52977966 - 52977923
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaac 44  Q
    |||| ||||||||||||||||||| |||||||||||||| ||||    
T  52977966 cttggtttgtgtaaaatgtcaaaaggtaacaattaaaaatgaac 52977923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 34603831 - 34603885
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagtac 55  Q
    ||||||||||||||||  ||||||||| ||||||||||| |||| |||| |||||    
T  34603831 cttgatttgtgtaaaaaatcaaaatgtgacaattaaaaaggaacagagggagtac 34603885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 36408930 - 36408968
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaa 39  Q
    |||| |||||||||||||||||||||| |||||||||||    
T  36408930 cttggtttgtgtaaaatgtcaaaatgtgacaattaaaaa 36408968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 36423096 - 36423134
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaa 39  Q
    |||| |||||||||||||||||||||| |||||||||||    
T  36423096 cttggtttgtgtaaaatgtcaaaatgtgacaattaaaaa 36423134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 3436104 - 3436063
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaaga 42  Q
    |||| |||||||||||||||||||||| | ||||||||||||    
T  3436104 cttggtttgtgtaaaatgtcaaaatgtgataattaaaaaaga 3436063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 6195231 - 6195284
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||| |||||||||||| || ||||||||||| |||| |||||||||    
T  6195231 cttggtttgtgaaaaatgtcaaaaagtgacaattaaaaaggaacagaggtagta 6195284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 8456948 - 8456895
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||| || |||||||||| ||||||||||| ||||||||| ||||    
T  8456948 cttggtttgtgtagaaagtcaaaatgtgacaattaaaaaggaacggagggagta 8456895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 9220078 - 9220025
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||| |||||| || |||||||||||  |||||||||||||    
T  9220078 cttgttttgtgtaaaatttcaaaaagtgacaattaaaaagaaacggaggtagta 9220025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 16664448 - 16664481
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaatt 34  Q
    ||||||||||||||||||||||||||| ||||||    
T  16664448 cttgatttgtgtaaaatgtcaaaatgtgacaatt 16664481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 17698669 - 17698722
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| ||| |||||||||||||||| | ||||||||||| ||||| ||||||||    
T  17698669 cttggtttatgtaaaatgtcaaaatatgacaattaaaaaggaacgaaggtagta 17698722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 19527257 - 19527204
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| ||||||||||| |||||||||| ||||||||||| ||| ||||| ||||    
T  19527257 cttggtttgtgtaaaacgtcaaaatgtgacaattaaaaaggaaaggagggagta 19527204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 21044784 - 21044732
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||||||||||||| | || |||||| ||||||||||||||    
T  21044784 cttggtttgtgtaaaatgtcaaaatgtgataa-taaaaaggaacggaggtagta 21044732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 30939362 - 30939415
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||  ||||||| | ||||||||||| ||||||||||||||    
T  30939362 cttggtttgtgtaaaaaatcaaaatatgacaattaaaaaggaacggaggtagta 30939415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 33809295 - 33809344
Alignment:
Q  2 ttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggta 51  Q
    |||||||||||||||||| |||| || ||||||||||| |||| ||||||    
T  33809295 ttgatttgtgtaaaatgttaaaaagtgacaattaaaaaggaacagaggta 33809344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 42099915 - 42099968
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||  ||||||||||||| |||||||||||| |||| ||||||||    
T  42099915 cttggtttgtgtttaatgtcaaaatgtgacaattaaaaaaaaacgaaggtagta 42099968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 46872128 - 46872180
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||||||||||||| |||||| |||| |||| |||||||||    
T  46872128 cttggtttgtgtaaaatgtcaaaatgtgacaatttaaaaggaac-gaggtagta 46872180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 50623620 - 50623672
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||||| ||||||| |||||||||||| |||||| ||||||    
T  50623620 cttggtttgtgtaaaatgttaaaatgtgacaattaaaaaa-aacggatgtagta 50623672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 3036592 - 3036640
Alignment:
Q  3 tgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggta 51  Q
    |||||| |||||||||| ||||| | ||||||||||| |||||||||||    
T  3036592 tgatttatgtaaaatgtaaaaatatgacaattaaaaaggaacggaggta 3036640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 4201358 - 4201314
Alignment:
Q  10 tgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||||||||||||||| |||||| |||| ||||||| ||||||    
T  4201358 tgtaaaatgtcaaaatgtgacaattgaaaacgaacggaagtagta 4201314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 14090452 - 14090500
Alignment:
Q  6 tttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||||||||  ||||||||| |||||||||||||||| |||| ||||    
T  14090452 tttgtgtaaaaaatcaaaatgtgacaattaaaaaagaacagagggagta 14090500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 31862018 - 31861970
Alignment:
Q  6 tttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||||||||| ||||||  ||||||||||||| |||||||| |||||    
T  31862018 tttgtgtaaaatttcaaaaaataacaattaaaaaggaacggagatagta 31861970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 38027603 - 38027559
Alignment:
Q  10 tgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||||| |||||| || ||||||||||| ||||||||||||||    
T  38027603 tgtaaaatatcaaaaagtgacaattaaaaaggaacggaggtagta 38027559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 3376316 - 3376266
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggta 51  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  3376316 cttgatttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggta 3376266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 10812403 - 10812456
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  10812403 cttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagta 10812456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 15183040 - 15182987
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  15183040 cttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagta 15182987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 25558225 - 25558172
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||||||||||||||||||| || |||||||||||||||||    
T  25558225 cttggtttgtgtaaaatgtcaaaatgtaacaatcaagaaagaacggaggtagta 25558172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 31011757 - 31011704
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| ||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  31011757 cttggtttgtataaaatgtcaaaatgtaacaattaaaaaggaacggaggtagta 31011704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 36375777 - 36375830
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  36375777 cttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagta 36375830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 44360637 - 44360690
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  44360637 cttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagta 44360690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 13215602 - 13215650
Alignment:
Q  6 tttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  13215602 tttgtgtaaaatgtcaaaaagtaacaattaaaaaggaacggaggtagta 13215650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 15893619 - 15893565
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagtac 55  Q
    |||| |||||||||||| ||||||||| ||||||||||| |||||||||||||||    
T  15893619 cttggtttgtgtaaaatatcaaaatgtgacaattaaaaaggaacggaggtagtac 15893565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 1259668 - 1259615
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||| |||||||||||||||||||||  |||||||||||||    
T  1259668 cttggtttgtgtaaaatatcaaaatgtaacaattaaaaagaaacggaggtagta 1259615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 3363788 - 3363841
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||||||||||||  ||||||||||| ||||||||||||||    
T  3363788 cttggtttgtgtaaaatgtcaaaatgcgacaattaaaaaggaacggaggtagta 3363841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 11222355 - 11222302
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| ||| |||||||||||||||||| ||||||||||| ||||||||||||||    
T  11222355 cttggtttatgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagta 11222302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 26342784 - 26342837
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| ||||||||||||||||||| || ||||||||||| ||||||||||||||    
T  26342784 cttggtttgtgtaaaatgtcaaaacgtgacaattaaaaaggaacggaggtagta 26342837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 34357382 - 34357435
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| ||||||||||||||| |||||| ||||||||||| ||||||||||||||    
T  34357382 cttggtttgtgtaaaatgtcgaaatgtgacaattaaaaaggaacggaggtagta 34357435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 41885829 - 41885882
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||||||||||||| ||||| ||||| ||||||||||||||    
T  41885829 cttggtttgtgtaaaatgtcaaaatgtgacaatgaaaaaggaacggaggtagta 41885882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 19594559 - 19594607
Alignment:
Q  6 tttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||||||||||||||||||| |||||||||||  |||||||||||||    
T  19594559 tttgtgtaaaatgtcaaaatgtgacaattaaaaagtaacggaggtagta 19594607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 13965811 - 13965862
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtag 52  Q
    |||| ||||||||||||||||||| || ||||||||||| ||||||||||||    
T  13965811 cttggtttgtgtaaaatgtcaaaaagtgacaattaaaaaggaacggaggtag 13965862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 479012 - 478959
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  479012 cttggtttgtgtaaaatgttaaaatgtgacaattaaaaaagaacagagatagta 478959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 8443882 - 8443935
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| ||||||||||||||||||| || ||||||||||| |||| |||||||||    
T  8443882 cttggtttgtgtaaaatgtcaaaaagtgacaattaaaaaggaacagaggtagta 8443935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 13000946 - 13000897
Alignment:
Q  5 atttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    ||||||||||||||||| || ||||||||||||||||||| || ||||||    
T  13000946 atttgtgtaaaatgtcacaaagtaacaattaaaaaagaacagatgtagta 13000897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 14284288 - 14284340
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||| ||||||||||| |||||||||||||||| |||||||||    
T  14284288 cttggtttgtgtaaa-tgtcaaaatgtgacaattaaaaaagaactgaggtagta 14284340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 14295796 - 14295743
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||||||||||||| ||||||||||| |||  |||||||||    
T  14295796 cttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaattgaggtagta 14295743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 14308597 - 14308650
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||||||||||||| |||||||||||  |||||| ||||||    
T  14308597 cttggtttgtgtaaaatgtcaaaatgtgacaattaaaaagaaacggatgtagta 14308650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 34399406 - 34399459
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||| ||||||||||| | ||||||||| ||||||||||||||    
T  34399406 cttggtttgtgtaaagtgtcaaaatgtgataattaaaaaggaacggaggtagta 34399459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 36173268 - 36173309
Alignment:
Q  6 tttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacgga 47  Q
    ||||||||||| |||||||||| |||||||||||||||||||    
T  36173268 tttgtgtaaaaagtcaaaatgtgacaattaaaaaagaacgga 36173309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 37093653 - 37093706
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||||||||||||| ||||||||||| | ||||||| ||||    
T  37093653 cttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggtacggagggagta 37093706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 4654932 - 4654976
Alignment:
Q  10 tgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||||||||||||||  ||||||||||| ||||||||||||||    
T  4654932 tgtaaaatgtcaaaatgagacaattaaaaaggaacggaggtagta 4654976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 9706996 - 9707044
Alignment:
Q  6 tttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    ||||||||||||||||||| || ||||||||||| |||||| |||||||    
T  9706996 tttgtgtaaaatgtcaaaaagtgacaattaaaaaggaacgggggtagta 9707044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 30264641 - 30264593
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggagg 49  Q
    |||| ||| |||||||||||||||||| ||||||||||| |||||||||    
T  30264641 cttggtttatgtaaaatgtcaaaatgtgacaattaaaaaggaacggagg 30264593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 10263960 - 10264010
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggta 51  Q
    |||| |||||||||||||||||||| | |||||| |||| |||||||||||    
T  10263960 cttggtttgtgtaaaatgtcaaaatatgacaatttaaaaggaacggaggta 10264010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 13754160 - 13754212
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| ||||||||||||||||||| || ||||||||||| ||||||| ||||||    
T  13754160 cttggtttgtgtaaaatgtcaaaa-gtgacaattaaaaaggaacggaagtagta 13754212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 25787531 - 25787584
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| ||||||||||| |||||||||| ||||||||||| |||| |||| ||||    
T  25787531 cttggtttgtgtaaaaagtcaaaatgtgacaattaaaaaggaacagagggagta 25787584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 37354193 - 37354246
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    ||||||||||||||||  | ||||||| ||||||||||  ||||||||||||||    
T  37354193 cttgatttgtgtaaaaaattaaaatgtgacaattaaaatggaacggaggtagta 37354246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 1395773 - 1395820
Alignment:
Q  6 tttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    ||||||||||||||||||| || ||| ||||||| ||||||||||||||    
T  1395773 tttgtgtaaaatgtcaaaaagt-acagttaaaaaggaacggaggtagta 1395820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 4883816 - 4883860
Alignment:
Q  10 tgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||||||||||||||| ||||||||||| ||| ||| ||||||    
T  4883816 tgtaaaatgtcaaaatgtgacaattaaaaaggaatggatgtagta 4883860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 14288638 - 14288686
Alignment:
Q  6 tttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    ||||| |||||| ||||||||| ||||||||||| ||||||| ||||||    
T  14288638 tttgtataaaatatcaaaatgtgacaattaaaaaggaacggaagtagta 14288686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 35158381 - 35158337
Alignment:
Q  10 tgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    ||||||||||||||| || |||||||||||  |||||||||||||    
T  35158381 tgtaaaatgtcaaaaagtgacaattaaaaagaaacggaggtagta 35158337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 38072266 - 38072218
Alignment:
Q  6 tttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||||||||||| ||||| | |||| |||||| ||||||||||||||    
T  38072266 tttgtgtaaaatgttaaaatatgacaaataaaaaggaacggaggtagta 38072218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 8358 - 8411
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  8358 cttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagta 8411  T

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Target: scaffold0024 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 89374 - 89427
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| | ||||||    
T  89374 cttgatttgtgtaaaatgtcaaaatgtgacaattaaaaaagaacgaatgtagta 89427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 49350 - 49403
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||| ||||||||||||||||| ||||||||||| ||||||| ||||||    
T  49350 cttggtttgcgtaaaatgtcaaaatgtgacaattaaaaaggaacggatgtagta 49403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 45101400 - 45101347
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  45101400 cttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagta 45101347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 49123726 - 49123779
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    ||||||||||||||||||||||||||| || |||||||| ||||||||||||||    
T  49123726 cttgatttgtgtaaaatgtcaaaatgtgactattaaaaaggaacggaggtagta 49123779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 54106467 - 54106520
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| ||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  54106467 cttggtttatgtaaaatgtcaaaatgtaacaattaaaaaggaacggaggtagta 54106520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 29651877 - 29651925
Alignment:
Q  6 tttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  29651877 tttgtgtaaaatgtaaaaatgtgacaattaaaaaagaacggaggtagta 29651925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 57
Target Start/End: Complemental strand, 33491172 - 33491125
Alignment:
Q  10 tgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagtacca 57  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||    
T  33491172 tgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagtacca 33491125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 29698199 - 29698245
Alignment:
Q  5 atttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggta 51  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||    
T  29698199 atttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggta 29698245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 41168962 - 41169008
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacgga 47  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||    
T  41168962 cttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaagaacgga 41169008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 41425833 - 41425887
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagtac 55  Q
    |||| |||||||||||||| ||||||| ||||||||||| |||||||||||||||    
T  41425833 cttggtttgtgtaaaatgttaaaatgtgacaattaaaaaggaacggaggtagtac 41425887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 42671921 - 42671879
Alignment:
Q  12 taaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  42671921 taaaatgtcaaaatgtgacaattaaaaaagaacggaggtagta 42671879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 13158481 - 13158428
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| ||| |||||||||||||||| ||||||||||||| ||||||||||||||    
T  13158481 cttggtttatgtaaaatgtcaaaatataacaattaaaaaggaacggaggtagta 13158428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 34266482 - 34266429
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||||||||||||| || |||||||| ||||||||||||||    
T  34266482 cttggtttgtgtaaaatgtcaaaatgtgacgattaaaaaggaacggaggtagta 34266429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 40010706 - 40010649
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagtaccat 58  Q
    |||| |||||||||||| |||||| |||||| ||||||| ||||||||||||||||||    
T  40010706 cttggtttgtgtaaaatatcaaaaagtaacacttaaaaaggaacggaggtagtaccat 40010649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 40318970 - 40318917
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||||| ||||||| ||||||||||| ||||||||||||||    
T  40318970 cttggtttgtgtaaaatgttaaaatgtgacaattaaaaatgaacggaggtagta 40318917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 43554593 - 43554646
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||||||||||||| |||||||||||  |||||||||||||    
T  43554593 cttggtttgtgtaaaatgtcaaaatgtgacaattaaaaagtaacggaggtagta 43554646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 51219135 - 51219082
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| ||||||||||||||||| |||| ||||||||||| ||||||||||||||    
T  51219135 cttggtttgtgtaaaatgtcaatatgtgacaattaaaaaggaacggaggtagta 51219082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 53745324 - 53745271
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||||||||||||| ||||||||||| ||||||| ||||||    
T  53745324 cttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggatgtagta 53745271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 19550455 - 19550503
Alignment:
Q  6 tttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||||||||||||||||||| ||||||||||| |||||| |||||||    
T  19550455 tttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacgggggtagta 19550503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 20848761 - 20848713
Alignment:
Q  6 tttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||||||||||||||||||| ||| ||||||| ||||||||||||||    
T  20848761 tttgtgtaaaatgtcaaaatgtgacagttaaaaaggaacggaggtagta 20848713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 43775432 - 43775372
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagtaccatttt 61  Q
    |||| ||| |||||||||||||||||| | ||||||||| |||||||||||||| ||||||    
T  43775432 cttggtttatgtaaaatgtcaaaatgtgaaaattaaaaaggaacggaggtagtaacatttt 43775372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 2858612 - 2858565
Alignment:
Q  8 tgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagtac 55  Q
    |||||||||||| ||||||| ||||||||||| |||||||||||||||    
T  2858612 tgtgtaaaatgttaaaatgtgacaattaaaaaggaacggaggtagtac 2858565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 29803860 - 29803906
Alignment:
Q  9 gtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagtac 55  Q
    ||||||||| ||||||||| ||||||||||| |||||||||||||||    
T  29803860 gtgtaaaatatcaaaatgtgacaattaaaaaggaacggaggtagtac 29803906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 47069899 - 47069837
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagtaccattttgg 63  Q
    |||| |||||||||||||||||||||| |||||||||||  |||||| ||||||  |||||||    
T  47069899 cttggtttgtgtaaaatgtcaaaatgtgacaattaaaaagaaacggatgtagtattattttgg 47069837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 24981499 - 24981540
Alignment:
Q  6 tttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacgga 47  Q
    |||||| ||||||||||||||| |||||||||||||||||||    
T  24981499 tttgtgcaaaatgtcaaaatgtgacaattaaaaaagaacgga 24981540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 32980844 - 32980897
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||||||||||||| ||||||||||| |||| || ||||||    
T  32980844 cttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacagatgtagta 32980897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 35315336 - 35315389
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    ||||||||||||||||||||||||  | ||||||||||| |||||||| |||||    
T  35315336 cttgatttgtgtaaaatgtcaaaaaatgacaattaaaaaggaacggagttagta 35315389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 36234572 - 36234621
Alignment:
Q  5 atttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    ||||||||||||| ||||||||| ||||||||||| ||||||| ||||||    
T  36234572 atttgtgtaaaatatcaaaatgtgacaattaaaaaggaacggatgtagta 36234621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 45513359 - 45513306
Alignment:
Q  2 ttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagtac 55  Q
    |||||||||||||||| ||||||| | ||||||||||| ||||||| |||||||    
T  45513359 ttgatttgtgtaaaatatcaaaatatgacaattaaaaaggaacggatgtagtac 45513306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 3643237 - 3643185
Alignment:
Q  2 ttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    ||||||||||||||||||||||| || ||| ||||||| ||| ||||||||||    
T  3643237 ttgatttgtgtaaaatgtcaaaaagtgacacttaaaaaggaatggaggtagta 3643185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 27992450 - 27992494
Alignment:
Q  7 ttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggta 51  Q
    ||||||||||||||||||||| ||||||||||| |||| ||||||    
T  27992450 ttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacagaggta 27992494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 33874583 - 33874535
Alignment:
Q  6 tttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||||||||||||||||  | ||||||||||| ||||||||||||||    
T  33874583 tttgtgtaaaatgtcaaaaaatgacaattaaaaaggaacggaggtagta 33874535  T

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Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 33074320 - 33074261
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagtaccattt 60  Q
    |||| |||||||||||||||||||||| |||| |||||| ||||| || ||||| |||||    
T  33074320 cttggtttgtgtaaaatgtcaaaatgtgacaaataaaaaggaacgtagatagtatcattt 33074261  T

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Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 52175923 - 52175974
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtag 52  Q
    |||| |||||||||||||||||||||| | ||||||||| ||||||| ||||    
T  52175923 cttggtttgtgtaaaatgtcaaaatgtcataattaaaaaggaacggatgtag 52175974  T

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Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 26748556 - 26748594
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaa 39  Q
    |||||||||||||||| |||||||||| |||||||||||    
T  26748556 cttgatttgtgtaaaaagtcaaaatgtgacaattaaaaa 26748594  T

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Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 28226620 - 28226666
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacgga 47  Q
    |||| ||||||||||| |||||||||| ||||||||||| |||||||    
T  28226620 cttggtttgtgtaaaaagtcaaaatgtgacaattaaaaaggaacgga 28226666  T

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Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 43945594 - 43945636
Alignment:
Q  12 taaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||||||||||||| |||| |||||| ||||||||||||||    
T  43945594 taaaatgtcaaaatgtgacaactaaaaaggaacggaggtagta 43945636  T

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Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 55
Target Start/End: Complemental strand, 32853397 - 32853348
Alignment:
Q  6 tttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagtac 55  Q
    ||||||||||||||||||| || ||||||||||| ||| |||| ||||||    
T  32853397 tttgtgtaaaatgtcaaaaagttacaattaaaaaggaatggagatagtac 32853348  T

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Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 35077591 - 35077652
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagtaccattttg 62  Q
    |||| ||||||||||| |||||||| | ||||||||||| |||| |||| |||| |||||||    
T  35077591 cttggtttgtgtaaaaagtcaaaatatgacaattaaaaaggaacagagggagtaacattttg 35077652  T

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Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 35458546 - 35458493
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| ||||||||||| || ||||||| |||||||||||  |||||||||||||    
T  35458546 cttggtttgtgtaaaaagttaaaatgtgacaattaaaaagaaacggaggtagta 35458493  T

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Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 39866891 - 39866839
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| ||||||||||||||||||| || ||||||| ||||||||| ||||||||    
T  39866891 cttggtttgtgtaaaatgtcaaaaagtgacaatta-aaaagaacgaaggtagta 39866839  T

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Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 41351236 - 41351183
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||||| |||||||| ||| || || ||||||||||| ||||||||||||||    
T  41351236 cttgatttatgtaaaatatcagaaagtgacaattaaaaaggaacggaggtagta 41351183  T

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Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 42515216 - 42515163
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||||| |||| || ||||||||||| ||||||| ||||||    
T  42515216 cttggtttgtgtaaaatgttaaaaagttacaattaaaaaggaacggatgtagta 42515163  T

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Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 39
Target Start/End: Original strand, 46973632 - 46973665
Alignment:
Q  6 tttgtgtaaaatgtcaaaatgtaacaattaaaaa 39  Q
    |||||||||||| |||||||||||||||||||||    
T  46973632 tttgtgtaaaatatcaaaatgtaacaattaaaaa 46973665  T

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Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 50092149 - 50092202
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| ||||||||||||||||||| |  ||| ||||||| ||||||||||||||    
T  50092149 cttggtttgtgtaaaatgtcaaaaagcgacagttaaaaaggaacggaggtagta 50092202  T

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Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 52627268 - 52627227
Alignment:
Q  13 aaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    ||||||||||||||| ||||||||||| |||||||| |||||    
T  52627268 aaaatgtcaaaatgtgacaattaaaaaggaacggagatagta 52627227  T

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Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 7329033 - 7329081
Alignment:
Q  6 tttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||||||||||| ||||||| |||||||||||  || ||||||||||    
T  7329033 tttgtgtaaaatgttaaaatgtgacaattaaaaagaaatggaggtagta 7329081  T

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Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 13168209 - 13168261
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagt 53  Q
    |||| ||||| |||||||| ||||||| ||||||||||| ||||||| |||||    
T  13168209 cttggtttgtataaaatgtaaaaatgtgacaattaaaaaggaacggatgtagt 13168261  T

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Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 28943574 - 28943523
Alignment:
Q  2 ttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||||||||||||||||| |||| || ||  ||||||||||||||||||||||    
T  28943574 ttgatttgtgtaaaatgttaaaa-gtgaccgttaaaaaagaacggaggtagta 28943523  T

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Target: scaffold0009 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 147163 - 147111
Alignment:
Q  2 ttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    ||||||||||||||||||||||| || ||||||||||| ||||||||||||||    
T  147163 ttgatttgtgtaaaatgtcaaaaagtgacaattaaaaaggaacggaggtagta 147111  T

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Target: scaffold0014 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 195624 - 195578
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacgga 47  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||    
T  195624 cttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaagaacgga 195578  T

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Target: scaffold0007 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 77292 - 77346
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagtac 55  Q
    ||||||||||||||||||| ||||||| |||||||| || |||||||||||||||    
T  77292 cttgatttgtgtaaaatgttaaaatgtgacaattaagaaggaacggaggtagtac 77346  T

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Target: scaffold0040 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 69303 - 69356
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||||||||||||| |||||| |||| ||||||||||||||    
T  69303 cttggtttgtgtaaaatgtcaaaatgtgacaattgaaaaggaacggaggtagta 69356  T

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Target: scaffold0002 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 148507 - 148560
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| ||| |||||||||||||||| ||||||||||||| ||||||||||||||    
T  148507 cttggtttatgtaaaatgtcaaaatataacaattaaaaaggaacggaggtagta 148560  T

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Target: scaffold0002; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 138779 - 138727
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagt 53  Q
    |||| ||||| |||||||| ||||||| ||||||||||| ||||||| |||||    
T  138779 cttggtttgtataaaatgtaaaaatgtgacaattaaaaaggaacggatgtagt 138727  T

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Target: scaffold0343 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 7628 - 7681
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    ||||||||||||||||| |||||| || ||||||||||| ||||| ||||||||    
T  7628 cttgatttgtgtaaaatatcaaaaagtgacaattaaaaaggaacgaaggtagta 7681  T

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Target: scaffold0172 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 26164 - 26111
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| ||| |||||||||||||||| | ||||||||||| |||| |||||||||    
T  26164 cttggtttatgtaaaatgtcaaaatatgacaattaaaaacgaacagaggtagta 26111  T

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Target: scaffold0135 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 30729 - 30676
Alignment:
Q  1 cttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    |||| |||||||||||| |||||| || |||||||||||  |||||||||||||    
T  30729 cttgttttgtgtaaaatttcaaaaagtgacaattaaaaagaaacggaggtagta 30676  T

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Target: scaffold2146 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold2146
Description:

Target: scaffold2146; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 757 - 809
Alignment:
Q  2 ttgatttgtgtaaaatgtcaaaatgtaacaattaaaaaagaacggaggtagta 54  Q
    ||||||| |||||||||| |||| || | ||||||||| ||||||||||||||    
T  757 ttgatttatgtaaaatgttaaaaagtgaaaattaaaaaggaacggaggtagta 809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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