View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19113_low_35 (Length: 251)
Name: NF19113_low_35
Description: NF19113
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19113_low_35 |
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Alignment Details
Target: chr3 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 4 - 245
Target Start/End: Original strand, 42151767 - 42152008
Alignment:
| Q |
4 |
tgaataacaacatgacccggtttgaaataacttaataaatgaagtttatgcgtacattggattcaatgattgtgaaaaatttaacgaaagagnnnnnnnc |
103 |
Q |
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| T |
42151767 |
tgaataacaacatgacccggtttgaaataacttaataaatgaagtttatgcgtacattggattcaatgattgtgaaaaatttaacgaaagagaaaaaaac |
42151866 |
T |
|
| Q |
104 |
aaattaatagcttagggcacaaggaaagcaaaagaaaacaacaccacacacagtcacacatgcgtgtgacattttcttaaacgtgaatgagacaataaaa |
203 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
42151867 |
aaattaatagcttagggcacaaggaaagcaaaagaaaacaacaccacacactgtcacacatgtgtgtgacattttcttaaacgtgaatgagacaataaaa |
42151966 |
T |
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| Q |
204 |
aatgggtgatggaaaaaacgcgaaagtttacatattcttcga |
245 |
Q |
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|||||||||| |||||||||||||||||||||| || ||||| |
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| T |
42151967 |
aatgggtgattgaaaaaacgcgaaagtttacatttttttcga |
42152008 |
T |
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