View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19115_high_5 (Length: 323)
Name: NF19115_high_5
Description: NF19115
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19115_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 3 - 309
Target Start/End: Original strand, 17111216 - 17111531
Alignment:
| Q |
3 |
gaaaattagataatcttacattattcatgagtactctaacaattggctactctcactatttatcctcctaacttaaaatcaacttctacagctcaatttt |
102 |
Q |
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| T |
17111216 |
gaaaatgagataatcttacattattcacgagtactctaacaattggctactctcaatatttatcctcctaacttaaaatcaacttctacagctcaatttt |
17111315 |
T |
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| Q |
103 |
caaaaagatataccctttaatttctacaaacttataataagaaagttcagaaacaaaatttcatatttcaggtgaaaactcatgttgaggtagaagctaa |
202 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
17111316 |
caaaaagatataccctttaatttctacaaacttataataagaaagttcagaaacaaaatttcatatttcaggtgaaaacccatgttgaggtagaagctaa |
17111415 |
T |
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| Q |
203 |
tcctgaacaagtaca-------aaaaacaaaataataacac--aaacgaaaagtaactaatttcaactatccaatttagttctattttctccacctcaaa |
293 |
Q |
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||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
17111416 |
tcctgaacaagtacaaaaaaacaaaaacaaaataataacacaaaaacgaaaagaaactaatttcaactatccaatttagttctattttctccacctcaac |
17111515 |
T |
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| Q |
294 |
tttcaaacattcatac |
309 |
Q |
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|||||| ||||||||| |
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| T |
17111516 |
tttcaagcattcatac |
17111531 |
T |
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