View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19115_low_1 (Length: 546)

Name: NF19115_low_1
Description: NF19115
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19115_low_1
NF19115_low_1
[»] chr6 (17 HSPs)
chr6 (290-537)||(13017186-13017433)
chr6 (292-537)||(22221726-22221968)
chr6 (292-537)||(22247561-22247803)
chr6 (403-537)||(30978321-30978455)
chr6 (292-537)||(14790620-14790865)
chr6 (293-537)||(14795648-14795892)
chr6 (294-537)||(19664667-19664909)
chr6 (419-537)||(16883677-16883795)
chr6 (324-537)||(15535058-15535270)
chr6 (417-537)||(20527286-20527407)
chr6 (363-535)||(15540574-15540744)
chr6 (301-415)||(1838598-1838712)
chr6 (491-537)||(32704452-32704498)
chr6 (478-538)||(1838474-1838535)
chr6 (478-537)||(27649104-27649164)
chr6 (293-360)||(7559850-7559920)
chr6 (419-482)||(11183962-11184025)
[»] chr5 (15 HSPs)
chr5 (291-534)||(15532198-15532441)
chr5 (299-534)||(15542388-15542623)
chr5 (301-537)||(33575091-33575326)
chr5 (299-536)||(11988868-11989108)
chr5 (292-537)||(34405850-34406095)
chr5 (293-404)||(22159881-22159992)
chr5 (293-397)||(26711464-26711567)
chr5 (293-397)||(26981201-26981304)
chr5 (324-521)||(7649972-7650169)
chr5 (301-537)||(14616437-14616672)
chr5 (391-522)||(26712439-26712571)
chr5 (391-522)||(26982177-26982309)
chr5 (459-537)||(22159746-22159823)
chr5 (293-411)||(1810190-1810310)
chr5 (293-411)||(2499762-2499882)
[»] chr2 (9 HSPs)
chr2 (292-534)||(31528394-31528636)
chr2 (292-537)||(13710072-13710316)
chr2 (293-522)||(40017996-40018224)
chr2 (303-537)||(31626551-31626784)
chr2 (301-537)||(16294900-16295135)
chr2 (301-537)||(23673353-23673588)
chr2 (293-537)||(36326928-36327171)
chr2 (293-402)||(29436003-29436113)
chr2 (292-384)||(24384924-24385018)
[»] chr3 (10 HSPs)
chr3 (293-537)||(22626312-22626554)
chr3 (291-537)||(11138568-11138812)
chr3 (292-522)||(39563509-39563739)
chr3 (25-148)||(26761759-26761882)
chr3 (129-289)||(26761592-26761746)
chr3 (336-437)||(20536379-20536479)
chr3 (350-454)||(35366459-35366562)
chr3 (285-411)||(19869223-19869351)
chr3 (292-403)||(46731589-46731700)
chr3 (478-537)||(13979488-13979548)
[»] chr7 (17 HSPs)
chr7 (293-537)||(23759609-23759852)
chr7 (292-519)||(11279511-11279737)
chr7 (299-537)||(36222315-36222552)
chr7 (301-537)||(46846320-46846556)
chr7 (293-537)||(33312996-33313239)
chr7 (299-537)||(294866-295100)
chr7 (292-537)||(6967149-6967394)
chr7 (293-537)||(3861907-3862150)
chr7 (292-537)||(17866352-17866597)
chr7 (324-537)||(24783410-24783624)
chr7 (415-537)||(23313382-23313504)
chr7 (400-537)||(17863202-17863338)
chr7 (478-537)||(9765803-9765863)
chr7 (420-537)||(23107989-23108106)
chr7 (293-408)||(17857880-17857996)
chr7 (290-411)||(3540921-3541042)
chr7 (491-537)||(36843135-36843181)
[»] scaffold0440 (1 HSPs)
scaffold0440 (292-537)||(9865-10110)
[»] chr4 (7 HSPs)
chr4 (291-479)||(12172031-12172220)
chr4 (293-537)||(2541886-2542128)
chr4 (292-537)||(647202-647447)
chr4 (292-537)||(650474-650719)
chr4 (292-537)||(26062689-26062937)
chr4 (485-537)||(26060589-26060641)
chr4 (489-537)||(11649429-11649477)
[»] scaffold0264 (1 HSPs)
scaffold0264 (301-537)||(24193-24426)
[»] chr8 (6 HSPs)
chr8 (292-522)||(12575299-12575528)
chr8 (292-537)||(14418467-14418708)
chr8 (415-537)||(41778864-41778985)
chr8 (458-538)||(13097021-13097100)
chr8 (489-537)||(41836418-41836466)
chr8 (293-411)||(9467309-9467429)
[»] chr1 (10 HSPs)
chr1 (292-537)||(13493264-13493509)
chr1 (293-537)||(10764921-10765165)
chr1 (294-537)||(1936628-1936873)
chr1 (324-537)||(13495989-13496202)
chr1 (415-537)||(34066346-34066468)
chr1 (414-537)||(16190299-16190421)
chr1 (293-537)||(32505857-32506098)
chr1 (363-537)||(39546244-39546417)
chr1 (416-482)||(8435292-8435358)
chr1 (324-431)||(49716595-49716704)
[»] scaffold0363 (1 HSPs)
scaffold0363 (292-537)||(10-251)
[»] scaffold0567 (1 HSPs)
scaffold0567 (483-537)||(5999-6054)
[»] scaffold0352 (1 HSPs)
scaffold0352 (324-469)||(2649-2795)
[»] scaffold0500 (1 HSPs)
scaffold0500 (490-523)||(2709-2742)
[»] scaffold0063 (1 HSPs)
scaffold0063 (490-523)||(7189-7222)


Alignment Details
Target: chr6 (Bit Score: 220; Significance: 1e-121; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 290 - 537
Target Start/End: Original strand, 13017186 - 13017433
Alignment:
Q  290 aattgataaatatttggcaagtgaatcaaattcgatcgaagtaataaaaagttcgttttcacgaggactgtatttaacttctacttagcaatttcattat 389  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  13017186 aattgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaagttcgtttccacgaggactatatttaacttctacttagcaatttcattat 13017285  T
Q  390 taaaaaggatgtataaatttatattggtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaat 489  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  13017286 taaaaaggatgtataaatttatattggtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttcagaaaat 13017385  T
Q  490 tgagagaagtatggttaagtccttcgaatcctctaaagttctcctatg 537  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||||    
T  13017386 tgagagaagtatggttaagtccttcgaatcctccaaagctctcctatg 13017433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 292 - 537
Target Start/End: Complemental strand, 22221968 - 22221726
Alignment:
Q  292 ttgataaatatttggcaagtgaatcaaattcgatcgaagtaataaaaagttcgttttcacgaggactgtatttaacttctacttagcaatttcattatta 391  Q
    |||||| | |||||||||||| | ||||  | ||||||||| ||| || ||||||| |||||||||| |||||| |||||||| ||||||||||||||||    
T  22221968 ttgatagaaatttggcaagtgtaccaaaagctatcgaagtagtaataaattcgtttccacgaggactatatttagcttctactaagcaatttcattatta 22221869  T
Q  392 aaaaggatgtataaatttatattggtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaattg 491  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||| |||||||||    
T  22221868 aaaaggatgtataaattattattggtgccctaggcagttgagttgatttagta--ataaactaattaaaaacaataaagaattggttttt-agaaaattg 22221772  T
Q  492 agagaagtatggttaagtccttcgaatcctctaaagttctcctatg 537  Q
    ||||||| |||||||||||||||||||||||  ||| |||||||||    
T  22221771 agagaagcatggttaagtccttcgaatcctccgaagctctcctatg 22221726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 292 - 537
Target Start/End: Complemental strand, 22247803 - 22247561
Alignment:
Q  292 ttgataaatatttggcaagtgaatcaaattcgatcgaagtaataaaaagttcgttttcacgaggactgtatttaacttctacttagcaatttcattatta 391  Q
    |||||| | |||||||||||| | ||||  | ||||||||| ||| || ||||||| |||||||||| |||||| |||||||| ||||||||||||||||    
T  22247803 ttgatagaaatttggcaagtgtaccaaaagctatcgaagtagtaataaattcgtttccacgaggactatatttagcttctactaagcaatttcattatta 22247704  T
Q  392 aaaaggatgtataaatttatattggtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaattg 491  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||| |||||||||    
T  22247703 aaaaggatgtataaattattattggtgccctaggcagttgagttgatttagta--ataaactaattaaaaacaataaagaattggttttt-agaaaattg 22247607  T
Q  492 agagaagtatggttaagtccttcgaatcctctaaagttctcctatg 537  Q
    ||||||| |||||||||||||||||||||||  ||| |||||||||    
T  22247606 agagaagcatggttaagtccttcgaatcctccgaagctctcctatg 22247561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 403 - 537
Target Start/End: Original strand, 30978321 - 30978455
Alignment:
Q  403 taaatttatattggtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaattgagagaagtatg 502  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30978321 taaatttatattggtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaattgagagaagtatg 30978420  T
Q  503 gttaagtccttcgaatcctctaaagttctcctatg 537  Q
    |||||||||||||||||||| |||| |||||||||    
T  30978421 gttaagtccttcgaatcctccaaagctctcctatg 30978455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 292 - 537
Target Start/End: Complemental strand, 14790865 - 14790620
Alignment:
Q  292 ttgataaatatttggcaagtgaatcaaattcgatcgaagtaataa-aaagttcgttttcacgaggactgtatttaacttctacttagcaatttcattatt 390  Q
    |||||| |||||||||||||| | ||||  | ||||||||| ||| ||||||||| | ||||||||| ||  |||| |||||||  |||||||| ||||     
T  14790865 ttgatagatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctactcggcaatttctttatc 14790766  T
Q  391 aaaaaggatgtataaatttatattg-gtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaat 489  Q
    |||||||||||||||||||||||||  |||||||||||||||||||| ||| |||||||||||  |   ||||||||||| | |||| |||| |||| ||    
T  14790765 aaaaaggatgtataaatttatattgattgccctaggcagttgagttg-ttttgtaacataaacgtaaataaaacaataaa-agttgg-ttttcagaatat 14790669  T
Q  490 t-gagagaagtatggttaagtccttcgaatcctctaaagttctcctatg 537  Q
    | |||||||||||||||||| |||||||||||||| |||||||||||||    
T  14790668 tagagagaagtatggttaagaccttcgaatcctctgaagttctcctatg 14790620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 293 - 537
Target Start/End: Complemental strand, 14795892 - 14795648
Alignment:
Q  293 tgataaatatttggcaagtgaatcaaattcgatcgaagtaataa-aaagttcgttttcacgaggactgtatttaacttctacttagcaatttcattatta 391  Q
    ||||| |||||||||||||| | ||||  | ||||||||| ||| |||||||||    |||||||| ||  |||| |||||||  |||||||| |||| |    
T  14795892 tgatagatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtacctacgaggaccgttgttaatttctactcggcaatttctttatca 14795793  T
Q  392 aaaaggatgtataaatttatattg-gtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaatt 490  Q
    ||||||||||||||||||||||||  |||||||||||||||||||| ||| |||||||||||  |   ||||||||||| | |||| |||| |||| |||    
T  14795792 aaaaggatgtataaatttatattgattgccctaggcagttgagttg-ttttgtaacataaacgtaaataaaacaataaa-agttgg-ttttcagaatatt 14795696  T
Q  491 -gagagaagtatggttaagtccttcgaatcctctaaagttctcctatg 537  Q
     |||||||||||||||||| |||||||||||||| |||||||||||||    
T  14795695 agagagaagtatggttaagaccttcgaatcctctgaagttctcctatg 14795648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 294 - 537
Target Start/End: Original strand, 19664667 - 19664909
Alignment:
Q  294 gataaatatttggcaagtgaatcaaattcgatcgaagtaataaa-aagttcgttttcacgaggactgtatttaacttctacttagcaatttcattattaa 392  Q
    |||||| |||||||||||||| ||||  | |||||||||||||| || || || | ||||||||| ||  || | ||||||| | ||||||| |||| ||    
T  19664667 gataaagatttggcaagtgaaccaaaa-ctatcgaagtaataaataaatttgtatccacgaggaccgttgtttatttctactcaacaatttctttatcaa 19664765  T
Q  393 aaaggatgtataaatttatattggtgccctaggcagttgagttgat-ttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaatt- 490  Q
    ||||||||||| || ||  |  | |||||||||||||||  ||| | || |||| |||||| ||||||||||||||||   |||||||  |||||||||     
T  19664766 aaaggatgtattaaattcaag-gttgccctaggcagttggattggtatttgtaaaataaacggattaaaaacaataaaagtttggttt--aagaaaatta 19664862  T
Q  491 gagagaagtatggttaagtccttcgaatcctctaaagttctcctatg 537  Q
    |||||| ||||||||||| |||||||||||||  |||||||||||||    
T  19664863 gagagatgtatggttaagaccttcgaatcctccgaagttctcctatg 19664909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 419 - 537
Target Start/End: Complemental strand, 16883795 - 16883677
Alignment:
Q  419 ccctaggcagttgagttgattta-gtaacataaactgattaaaaacaataaagaattggtttttaagaaaatt-gagagaagtatggttaagtccttcga 516  Q
    |||||||||||||| |||||||  |||||||||||  |||||||||||||||  |||||||||  |||||||| |||||||||||||||||| | |||||    
T  16883795 ccctaggcagttgaattgatttttgtaacataaacgaattaaaaacaataaaagattggtttt--agaaaattagagagaagtatggttaagacattcga 16883698  T
Q  517 atcctctaaagttctcctatg 537  Q
    |||||   |||||||||||||    
T  16883697 atccttcgaagttctcctatg 16883677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 324 - 537
Target Start/End: Complemental strand, 15535270 - 15535058
Alignment:
Q  324 atcgaagtaataaa-aagttcgttttcacgaggactgtatttaacttctacttagcaatttcattattaaaaaggatgtataaatttatattggtgccct 422  Q
    |||||||||||||| || ||||| | ||||||||| ||  |||||||||||| ||| ||||| |||| ||||||||||||| || ||  |  | ||||||    
T  15535270 atcgaagtaataaataaattcgtatccacgaggaccgttgttaacttctactcagccatttctttataaaaaaggatgtattaaattcaag-gttgccct 15535172  T
Q  423 aggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaatt-gagagaagtatggttaagtccttcgaatcct 521  Q
    |||||||||||||||||| |||| | |||  ||||||||||||||||   ||||||||  | ||||||  || || ||||||||||| ||||| ||||||    
T  15535171 aggcagttgagttgattttgtaaaacaaatagattaaaaacaataaaagtttggtttt--acaaaattaaagtgatgtatggttaagaccttcaaatcct 15535074  T
Q  522 ctaaagttctcctatg 537  Q
    |  ||||| |||||||    
T  15535073 ccgaagttttcctatg 15535058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 417 - 537
Target Start/End: Original strand, 20527286 - 20527407
Alignment:
Q  417 tgccctaggcagttgagttgattta-gtaacataaac-tgattaaaaacaataaagaattggtttttaagaaaatt-gagagaagtatggttaagtcctt 513  Q
    |||||||||||||||| |||||||  ||||| ||||| | | ||||||||||||| | |||||||| ||||| ||| |||||||||||||||||| ||||    
T  20527286 tgccctaggcagttgaattgatttttgtaacgtaaacataaataaaaacaataaa-agttggtttt-aagaatattagagagaagtatggttaagacctt 20527383  T
Q  514 cgaatcctctaaagttctcctatg 537  Q
    |||||||||  |||||||||||||    
T  20527384 cgaatcctccgaagttctcctatg 20527407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 363 - 535
Target Start/End: Complemental strand, 15540744 - 15540574
Alignment:
Q  363 ttaacttctacttagcaatttcattattaaaaaggatgtataaatttatattggtgccctaggcagttgagttgatttagtaacataaactgattaaaaa 462  Q
    |||||||||||| |||||||||  ||| ||||||||||||| || ||  |  | | ||||||||||||||||||||||  ||| |||||  |||||||||    
T  15540744 ttaacttctactcagcaatttctatatcaaaaaggatgtattaaattcaag-gtttccctaggcagttgagttgattttctaaaataaagggattaaaaa 15540646  T
Q  463 caataaagaattggtttttaagaaaatt-gagagaagtatggttaagtccttcgaatcctctaaagttctccta 535  Q
    |||||||   || |||||  ||||||||  |||||  |||||||||| |||||||||||||  |||||||||||    
T  15540645 caataaaagtttagtttt--agaaaattaaagagatttatggttaagaccttcgaatcctccgaagttctccta 15540574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 301 - 415
Target Start/End: Complemental strand, 1838712 - 1838598
Alignment:
Q  301 atttggcaagtgaatcaaattcgatcgaagtaataaa-aagttcgttttcacgaggactgtatttaacttctacttagcaatttcattattaaaaaggat 399  Q
    |||||||||||||| |||| |  |||||||||||||| || ||||| | ||| ||||| ||  |||| |||||||  |||||||| |||| |||||||||    
T  1838712 atttggcaagtgaaccaaaatt-atcgaagtaataaataaattcgtatccacaaggaccgttgttaatttctactcggcaatttctttatcaaaaaggat 1838614  T
Q  400 gtataaatttatattg 415  Q
    ||||||||||||||||    
T  1838613 gtataaatttatattg 1838598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 491 - 537
Target Start/End: Original strand, 32704452 - 32704498
Alignment:
Q  491 gagagaagtatggttaagtccttcgaatcctctaaagttctcctatg 537  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||    
T  32704452 gagagaagtatggttaagaccttcgaatcctctgaagttctcctatg 32704498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 478 - 538
Target Start/End: Complemental strand, 1838535 - 1838474
Alignment:
Q  478 ttttaagaaaatt-gagagaagtatggttaagtccttcgaatcctctaaagttctcctatgt 538  Q
    ||||||||| ||| |||||||||||||||||| |||||||||||||  ||||||||||||||    
T  1838535 ttttaagaatattagagagaagtatggttaagaccttcgaatcctccgaagttctcctatgt 1838474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 478 - 537
Target Start/End: Complemental strand, 27649164 - 27649104
Alignment:
Q  478 ttttaagaaaatt-gagagaagtatggttaagtccttcgaatcctctaaagttctcctatg 537  Q
    ||||||||||||| ||| |||||||||||||| |||||||||||||  |||||||||||||    
T  27649164 ttttaagaaaattagagcgaagtatggttaagaccttcgaatcctccgaagttctcctatg 27649104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 293 - 360
Target Start/End: Original strand, 7559850 - 7559920
Alignment:
Q  293 tgataaatatttggcaagtgaatcaaattcgatcgaagtaataaa---aagttcgttttcacgaggactgt 360  Q
    ||||||||||||| |||||| |  ||||| |||||||||||||||   |||||||||| ||||| ||||||    
T  7559850 tgataaatatttgacaagtgtactaaatttgatcgaagtaataaagataagttcgtttccacgaagactgt 7559920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 419 - 482
Target Start/End: Original strand, 11183962 - 11184025
Alignment:
Q  419 ccctaggcagttgagttga-tttagtaacataaactgattaaaaacaataaagaattggttttta 482  Q
    ||||||||||||||||||| ||| |||||||||||  | ||||||||||||| | ||||||||||    
T  11183962 ccctaggcagttgagttgatttttgtaacataaacgtaataaaaacaataaa-agttggttttta 11184025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 220; Significance: 1e-121; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 291 - 534
Target Start/End: Original strand, 15532198 - 15532441
Alignment:
Q  291 attgataaatatttggcaagtgaatcaaattcgatcgaagtaataaaaagttcgttttcacgaggactgtatttaacttctacttagcaatttcattatt 390  Q
    ||||||| |||||||||| ||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  15532198 attgatagatatttggcatgtgaaccaaattcgatcgaagtaataaaaaattcgtttccacgaggactgtatttaacttctacttagcaatttcattatt 15532297  T
Q  391 aaaaaggatgtataaatttatattggtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaatt 490  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15532298 aaaaaggatgtataaatttatattggtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaatt 15532397  T
Q  491 gagagaagtatggttaagtccttcgaatcctctaaagttctcct 534  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  15532398 gagagaagtatggttaagtccttcgaatcctctaaagctctcct 15532441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 299 - 534
Target Start/End: Original strand, 15542388 - 15542623
Alignment:
Q  299 atatttggcaagtgaatcaaattcgatcgaagtaataaaaagttcgttttcacgaggactgtatttaacttctacttagcaatttcattattaaaaagga 398  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  15542388 atatttggcaagtgaaccaaattcgatcgaagtaataaaaaattcgtttccacgaggactgtatttaacttctacttaacaatttcattattaaaaagga 15542487  T
Q  399 tgtataaatttatattggtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaattgagagaag 498  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15542488 tgtataaatttatattggtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaattgagagaag 15542587  T
Q  499 tatggttaagtccttcgaatcctctaaagttctcct 534  Q
    ||||||||||||||||||||||||||||| ||||||    
T  15542588 tatggttaagtccttcgaatcctctaaagctctcct 15542623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 301 - 537
Target Start/End: Complemental strand, 33575326 - 33575091
Alignment:
Q  301 atttggcaagtgaatcaaattcgatcgaagtaataaaaagttcgttttcacgaggactgtatttaacttctacttagcaatttcattattaaaaaggatg 400  Q
    |||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  33575326 atttggcaagtgaaccaaattcaatcgaagtaataaaaaattcgttttcacgaggactgtatttaacttctatttagcaattttattattaaaaaggatg 33575227  T
Q  401 tataaatttatattggtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaattgagagaagta 500  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  33575226 tataaatttatattggtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggttttt-agaaaattgagagaagta 33575128  T
Q  501 tggttaagtccttcgaatcctctaaagttctcctatg 537  Q
    ||||||||||||||||||||||  ||| |||||||||    
T  33575127 tggttaagtccttcgaatcctccgaagctctcctatg 33575091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 299 - 536
Target Start/End: Original strand, 11988868 - 11989108
Alignment:
Q  299 atatttggcaagtgaatcaaattcgatcgaagtaataaaaagttcgttttcacgaggactgtatttaacttcta--cttagcaatttcattattaaaaag 396  Q
    ||||||| |||||||||||||||| |||||||||||||| | ||||||| |||||| || ||  ||||||||||  |||||||||||||||| ||| |||    
T  11988868 atatttgacaagtgaatcaaattcaatcgaagtaataaataattcgtttccacgagaaccgttcttaacttctatacttagcaatttcattagtaataag 11988967  T
Q  397 gatgtata--aatttatattggtgccctaggcagttgagttgattta-gtaacataaactgattaaaaacaataaagaattggtttttaagaaaatt-ga 492  Q
    || |||||  || ||  || ||| ||||||||||||||||||||||  ||||||||||| |||||||||| |||||  |||| ||||  |||||||| ||    
T  11988968 gacgtatattaaattcaat-ggtcccctaggcagttgagttgatttttgtaacataaacagattaaaaacgataaaagattgatttt--agaaaattaga 11989064  T
Q  493 gagaagtatggttaagtccttcgaatcctctaaagttctcctat 536  Q
    |||||||| ||||||| ||||||||||||| |||||||||||||    
T  11989065 gagaagtaaggttaagaccttcgaatcctccaaagttctcctat 11989108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 292 - 537
Target Start/End: Complemental strand, 34406095 - 34405850
Alignment:
Q  292 ttgataaatatttggcaagtgaatcaaattcgatcgaagtaataa-aaagttcgttttcacgaggactgtatttaacttctacttagcaatttcattatt 390  Q
    |||||| |||||||||||||| | ||||  | ||||||||| ||| ||||||||| | ||| ||||| ||  |||| |||||||  |||||||| ||||     
T  34406095 ttgatagatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacaaggaccgttgttaatttctactcggcaatttctttatc 34405996  T
Q  391 aaaaaggatgtataaatttatattg-gtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaat 489  Q
    |||||||||||||||||||||||||  |||||||||||||||||||| ||  |||||||||||  |   ||||||||||| | |||| |||| |||| ||    
T  34405995 aaaaaggatgtataaatttatattgattgccctaggcagttgagttg-ttgtgtaacataaacgtaaataaaacaataaa-agttgg-ttttcagaatat 34405899  T
Q  490 t-gagagaagtatggttaagtccttcgaatcctctaaagttctcctatg 537  Q
    | |||||||||||||||||| ||||| |||||||| |||||||||||||    
T  34405898 tagagagaagtatggttaagaccttcaaatcctctgaagttctcctatg 34405850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 293 - 404
Target Start/End: Complemental strand, 22159992 - 22159881
Alignment:
Q  293 tgataaatatttggcaagtgaatcaaattcgatcgaagtaataaaaagttcgttttcacgaggactgtatttaacttctacttagcaatttcattattaa 392  Q
    ||||| ||||||| |||||| | |||||||||||||||||||||||| || |||| |||||||||||||||||||||||||||||||||||| || | ||    
T  22159992 tgatagatatttgacaagtgtaccaaattcgatcgaagtaataaaaaatttgtttccacgaggactgtatttaacttctacttagcaatttctttgtcaa 22159893  T
Q  393 aaaggatgtata 404  Q
    ||||||||||||    
T  22159892 aaaggatgtata 22159881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 293 - 397
Target Start/End: Original strand, 26711464 - 26711567
Alignment:
Q  293 tgataaatatttggcaagtgaatcaaattcgatcgaagtaataaaaagttcgttttcacgaggactgtatttaacttctacttagcaatttcattattaa 392  Q
    ||||| |||||||||||||||| ||||||| || ||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||| ||    
T  26711464 tgatagatatttggcaagtgaaccaaattcaattgaagtaataaaaaattcgtttccacgaggactgta-ttaacttctacttagcaatttcattatcaa 26711562  T
Q  393 aaagg 397  Q
    |||||    
T  26711563 aaagg 26711567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 293 - 397
Target Start/End: Original strand, 26981201 - 26981304
Alignment:
Q  293 tgataaatatttggcaagtgaatcaaattcgatcgaagtaataaaaagttcgttttcacgaggactgtatttaacttctacttagcaatttcattattaa 392  Q
    ||||| |||||||||||||||| ||||||| || ||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||| ||    
T  26981201 tgatagatatttggcaagtgaaccaaattcaattgaagtaataaaaaattcgtttccacgaggactgta-ttaacttctacttagcaatttcattatcaa 26981299  T
Q  393 aaagg 397  Q
    |||||    
T  26981300 aaagg 26981304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 324 - 521
Target Start/End: Original strand, 7649972 - 7650169
Alignment:
Q  324 atcgaagtaataaa-aagttcgttttcacgaggactgtatttaacttctacttagcaatttcattattaaaaaggatgtataaatttatattg-gtgccc 421  Q
    |||||||||||||| || ||||| ||||||||||| ||  |||| ||||||| | ||||||| |||| |||||||||||||||||||||||||  |||||    
T  7649972 atcgaagtaataaataaattcgtattcacgaggaccgttgttaatttctactcaacaatttctttatcaaaaaggatgtataaatttatattgattgccc 7650071  T
Q  422 taggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaatt-gagagaagtatggttaagtccttcgaatcc 520  Q
    ||||||||||||||| ||| |||||||||||  |   ||||||||||  || | | ||||||||| ||| |||||||||||||||||| | || ||||||    
T  7650072 taggcagttgagttg-ttttgtaacataaacgtaaataaaacaataa--aagttgcttttaagaatattagagagaagtatggttaagacatttgaatcc 7650168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 301 - 537
Target Start/End: Original strand, 14616437 - 14616672
Alignment:
Q  301 atttggcaagtgaatcaaattcgatcgaagtaataaa-aagttcgttttcacgaggactgtatttaacttctacttagcaatttcattattaaaaaggat 399  Q
    |||||||||||||| ||||  | |||||||||||||| || ||||| | ||||||||| ||  |||| |||||||  |||||||| |||| |||||||||    
T  14616437 atttggcaagtgaaccaaaa-ctatcgaagtaataaataaattcgtatccacgaggaccgttgttaatttctactcggcaatttctttatcaaaaaggat 14616535  T
Q  400 gtataaatttatattg-gtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaatt-gagagaa 497  Q
    |||| |||||||||||  | ||||||| |||||||||| ||| |||||||||||  |   ||||||||||  || | | ||||||||| ||| |||||||    
T  14616536 gtatgaatttatattgattaccctaggaagttgagttg-ttttgtaacataaacgtaaataaaacaataa--aagttgattttaagaatattagagagaa 14616632  T
Q  498 gtatggttaagtccttcgaatcctctaaagttctcctatg 537  Q
    ||||||||||| |||| ||||||||  |||||||||||||    
T  14616633 gtatggttaagacctttgaatcctccgaagttctcctatg 14616672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 391 - 522
Target Start/End: Original strand, 26712439 - 26712571
Alignment:
Q  391 aaaaaggatgtataaa-tttatattggtgccctaggcagttgagttgatttagtaacataaac-tgattaaaaacaataaagaattggtttttaagaaaa 488  Q
    ||||||||||| |||| |||||||| ||||||||| ||||||||||||||| |||||||||||   |||||||| | ||||  |||||||||  ||||||    
T  26712439 aaaaaggatgtgtaaaatttatattagtgccctagacagttgagttgattttgtaacataaacaaaattaaaaatagtaaaagattggtttt--agaaaa 26712536  T
Q  489 t-tgagagaagtatggttaagtccttcgaatcctc 522  Q
    | ||||||||| ||||||||||| |||||||||||    
T  26712537 tctgagagaagaatggttaagtctttcgaatcctc 26712571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 391 - 522
Target Start/End: Original strand, 26982177 - 26982309
Alignment:
Q  391 aaaaaggatgtataaa-tttatattggtgccctaggcagttgagttgatttagtaacataaac-tgattaaaaacaataaagaattggtttttaagaaaa 488  Q
    ||||||||||| |||| |||||||| ||||||||| ||||||||||||||| |||||||||||   |||||||| | ||||  |||||||||  ||||||    
T  26982177 aaaaaggatgtgtaaaatttatattagtgccctagacagttgagttgattttgtaacataaacaaaattaaaaatagtaaaagattggtttt--agaaaa 26982274  T
Q  489 t-tgagagaagtatggttaagtccttcgaatcctc 522  Q
    | ||||||||| ||||||||||| |||||||||||    
T  26982275 tctgagagaagaatggttaagtctttcgaatcctc 26982309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 459 - 537
Target Start/End: Complemental strand, 22159823 - 22159746
Alignment:
Q  459 aaaacaataaagaattggtttttaagaaaatt-gagagaagtatggttaagtccttcgaatcctctaaagttctcctatg 537  Q
    ||||||||||| |||||||||| ||||| ||| ||||||| |||||||||| |||| ||||||||  |||||||||||||    
T  22159823 aaaacaataaa-aattggtttt-aagaatattagagagaaatatggttaagacctttgaatcctccgaagttctcctatg 22159746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 293 - 411
Target Start/End: Original strand, 1810190 - 1810310
Alignment:
Q  293 tgataaatatttggcaagtgaatcaaattcgatcgaagtaataa-aaagttcgttttcacgaggactgtatttaacttctacttagcaatttcattatta 391  Q
    |||||| |||||| |||||| | ||||  | ||||||||| ||| ||||||||| ||||||||||| ||  |||| ||||||||| ||| ||| |||  |    
T  1810190 tgataactatttgacaagtgtaccaaaagctatcgaagtagtaataaagttcgtattcacgaggaccgttgttaatttctacttaacaagttcgttaaaa 1810289  T
Q  392 aaaaggatgta-taaatttat 411  Q
     |||||||||| |||||||||    
T  1810290 taaaggatgtagtaaatttat 1810310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 293 - 411
Target Start/End: Original strand, 2499762 - 2499882
Alignment:
Q  293 tgataaatatttggcaagtgaatcaaattcgatcgaagtaataa-aaagttcgttttcacgaggactgtatttaacttctacttagcaatttcattatta 391  Q
    ||||| |||||||||||||| | ||||    ||||||||| ||| ||||||||| | ||||||||| ||  |||| ||||||||||||| ||| |||  |    
T  2499762 tgatagatatttggcaagtgtaccaaaagatatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaa 2499861  T
Q  392 aaaaggatgta-taaatttat 411  Q
     |||||||||| |||||||||    
T  2499862 taaaggatgtagtaaatttat 2499882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 219; Significance: 1e-120; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 292 - 534
Target Start/End: Complemental strand, 31528636 - 31528394
Alignment:
Q  292 ttgataaatatttggcaagtgaatcaaattcgatcgaagtaataaaaagttcgttttcacgaggactgtatttaacttctacttagcaatttcattatta 391  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||| || |||| |||||||||||||||||||||||||||||||||||||||||||    
T  31528636 ttgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaatttgtttccacgaggactgtatttaacttctacttagcaatttcattatta 31528537  T
Q  392 aaaaggatgtataaatttatattggtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaattg 491  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31528536 aaaaggatgtataaatttatattggtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaattg 31528437  T
Q  492 agagaagtatggttaagtccttcgaatcctctaaagttctcct 534  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  31528436 agagaagtatggttaagtccttcgaatcctctaaagctctcct 31528394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 292 - 537
Target Start/End: Complemental strand, 13710316 - 13710072
Alignment:
Q  292 ttgataaatatttggcaagtgaatcaaattcgatcgaagtaataaaaagttcgttttcacgaggactgtatttaacttctacttagcaatttcattatta 391  Q
    |||||| |||||||||||||||| ||||||| |||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  13710316 ttgatagatatttggcaagtgaaccaaattcaatcgaagtaataaaaa-ttcgtttttacgagaactgtatttaacttctacttagcaatttcattatta 13710218  T
Q  392 aaaaggatgtat-aaatttatattggtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaa-t 489  Q
    |||||||||||| |||||||||||| ||||  ||| ||||||||||| || ||||||||||| ||||||||||||||||  |||||||||  |||||| |    
T  13710217 aaaaggatgtataaaatttatattgatgcctgaggaagttgagttgagtt-gtaacataaacggattaaaaacaataaaagattggtttt--agaaaatt 13710121  T
Q  490 tgagagaagtatggttaagtccttcgaatcctct-aaagttctcctatg 537  Q
    ||||||||||||||||||| ||||| |||| ||| |||| |||||||||    
T  13710120 tgagagaagtatggttaagaccttcaaatcatctgaaagctctcctatg 13710072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 293 - 522
Target Start/End: Complemental strand, 40018224 - 40017996
Alignment:
Q  293 tgataaatatttggcaagtgaatcaaattcgatcgaagtaataaaaagttcgttttcacgaggactgtatttaacttctacttagcaatttcattattaa 392  Q
    |||| ||||||||||||||||| ||||||| |||||||||||||||| || |||||||| |||| || |||||||||| |||| |||||||  |||||||    
T  40018224 tgatgaatatttggcaagtgaaccaaattcaatcgaagtaataaaaaatttgttttcacaaggagtgcatttaacttcgacttggcaatttttttattaa 40018125  T
Q  393 aaaggatgtat-aaatttatattggtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttaag-aaaatt 490  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||||   | |||  |||||| ||||||    
T  40018124 aaaggatgtataaaatttatattgatgccctaggcagttgagttgattt-gtaacataaacggattaaaaacaataagagactgg--tttaagaaaaatt 40018028  T
Q  491 gagagaagtatggttaagtccttcgaatcctc 522  Q
    |||||||||||||||||| |||||||||||||    
T  40018027 gagagaagtatggttaagaccttcgaatcctc 40017996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 303 - 537
Target Start/End: Complemental strand, 31626784 - 31626551
Alignment:
Q  303 ttggcaagtgaatcaaattcgatcgaagtaataaaaagttcgttttcacgaggactgtatttaacttctacttagcaatttcattattaaaaaggatgta 402  Q
    |||| ||||||| ||||||| |||||||||||||||| |||||||  | |||||||||||| |||||||||||||||||||||||||||||||||||||     
T  31626784 ttggtaagtgaaccaaattcaatcgaagtaataaaaa-ttcgtttcaatgaggactgtatt-aacttctacttagcaatttcattattaaaaaggatgtg 31626687  T
Q  403 taaa-tttatattggtgccctaggcagttgagttgatttagtaacataaactg-attaaaaacaataaagaattggtttttaagaaaat-tgagagaagt 499  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||  | |||||||| ||||||| |||||||||  ||||||| |||||||||     
T  31626686 taaaatttatattggtgccctaggcagttgagttgattttgtaacataaaaggaattaaaaataataaaggattggtttt--agaaaatctgagagaaga 31626589  T
Q  500 atggttaagtccttcgaatcctctaaagttctcctatg 537  Q
    ||||||||||| |||||||||||  ||| |||||||||    
T  31626588 atggttaagtcattcgaatcctccgaagctctcctatg 31626551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 301 - 537
Target Start/End: Complemental strand, 16295135 - 16294900
Alignment:
Q  301 atttggcaagtgaatcaaattcgatcgaagtaataaa-aagttcgttttcacgaggactgtatttaacttctacttagcaatttcattattaaaaaggat 399  Q
    |||||||||||||| ||||  | |||||||||||||| ||| ||   | ||||||||| ||  |||| ||||||| ||||||||| ||||  ||| ||||    
T  16295135 atttggcaagtgaaccaaaa-ctatcgaagtaataaataagatcaaatccacgaggaccgttgttaatttctactcagcaatttcgttatcgaaa-ggat 16295038  T
Q  400 gtataaa-tttatattggtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaa-taaagaattggtttttaagaaaattgagagaa 497  Q
    ||||||| ||||||||| |||||||||||||||||||||||| ||| ||||||| |||||||||||| |||||| | |  |||| |||||||||||||||    
T  16295037 gtataaaatttatattgatgccctaggcagttgagttgattttgtatcataaaccgattaaaaacaaataaagattag--ttttcagaaaattgagagaa 16294940  T
Q  498 gtatggttaagtccttcgaatcctctaaagttctcctatg 537  Q
    |||||||||||||||||||||||||  |||||||||||||    
T  16294939 gtatggttaagtccttcgaatcctccgaagttctcctatg 16294900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 301 - 537
Target Start/End: Original strand, 23673353 - 23673588
Alignment:
Q  301 atttggcaagtgaatcaaattcgatcgaagtaataaa-aagttcgttttcacgaggactgtatttaacttctacttagcaatttcattattaaaaaggat 399  Q
    |||||||||||||| ||||  | |||||||||||||| || ||||| | ||||||||| ||  |||| ||||||| | ||||||| |||| |||||||||    
T  23673353 atttggcaagtgaaccaaaa-ctatcgaagtaataaataaattcgtatccacgaggaccgttgttaatttctactcaacaatttctttatcaaaaaggat 23673451  T
Q  400 gtataaatttatattggtgccctaggcagttgagttg--atttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaatt-gagaga 496  Q
    |||| || ||  |  | |||||||||||||||  |||  |||| |||| |||||| ||||||||||||||||   ||||||||  |||||||| ||||||    
T  23673452 gtattaaattcaag-gttgccctaggcagttggattggcattt-gtaaaataaacggattaaaaacaataaaagtttggtttt--agaaaattagagaga 23673547  T
Q  497 agtatggttaagtccttcgaatcctctaaagttctcctatg 537  Q
     ||||||||||| |||||||||||||  |||||||||||||    
T  23673548 tgtatggttaagaccttcgaatcctccgaagttctcctatg 23673588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 293 - 537
Target Start/End: Complemental strand, 36327171 - 36326928
Alignment:
Q  293 tgataaatatttggcaagtgaatcaaattcgatcgaagtaataaa-aagttcgttttcacgaggactgtatttaacttctacttagcaatttcattatta 391  Q
    ||||| |||||||||||||||| ||||  | |||||||||||||| || ||||| | ||||||||| ||  ||||||||||||  |||||||| |||| |    
T  36327171 tgatagatatttggcaagtgaaccaaaa-ctatcgaagtaataaataaattcgtatccacgaggaccgttgttaacttctactctgcaatttctttatca 36327073  T
Q  392 aaaaggatgta-taaatttatattggtgccctaggcagtt-gagttgatttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaat 489  Q
    |||| |||||| |||||| | |  | ||||||||| |||| || | |  || |||| |||||| ||||||||||||||||   ||||||||  |||||||    
T  36327072 aaaaagatgtattaaattcaaa--gttgccctaggaagttagattggtatttgtaaaataaacggattaaaaacaataaaagtttggtttt--agaaaat 36326977  T
Q  490 t-gagagaagtatggttaagtccttcgaatcctctaaagttctcctatg 537  Q
    | |||||| ||||||||||| |||| ||||||||  |||||||| ||||    
T  36326976 tagagagatgtatggttaagacctttgaatcctccgaagttctcatatg 36326928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 293 - 402
Target Start/End: Complemental strand, 29436113 - 29436003
Alignment:
Q  293 tgataaatatttggcaagtgaatcaaattcgatcgaagtaataa-aaagttcgttttcacgaggactgtatttaacttctacttagcaatttcattatta 391  Q
    ||||| ||| ||| |||||| ||||||  | ||||||||||||| ||||||||| | ||||||||| ||  |||| ||||||||||||| ||| |||  |    
T  29436113 tgatagataattgacaagtgtatcaaaaactatcgaagtaataataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaa 29436014  T
Q  392 aaaaggatgta 402  Q
     ||||||||||    
T  29436013 taaaggatgta 29436003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 384
Target Start/End: Original strand, 24384924 - 24385018
Alignment:
Q  292 ttgataaatatttggcaagtgaatcaaattcgatcgaagtaataaaa---agttcgttttcacgaggactgtatttaacttctacttagcaatttc 384  Q
    |||||| |||||||||||||| | ||||  | |||||||||||||||   | ||||| ||||||| ||||||  |||| |||||||||||||||||    
T  24384924 ttgatagatatttggcaagtgtaccaaaa-ctatcgaagtaataaaattaaattcgtattcacgatgactgttattaatttctacttagcaatttc 24385018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 210; Significance: 1e-115; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 293 - 537
Target Start/End: Original strand, 22626312 - 22626554
Alignment:
Q  293 tgataaatatttggcaagtgaatcaaattcgatcgaagtaataaaaagttcgttttcacgaggactgtatttaacttctacttagcaatttcattattaa 392  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  22626312 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaagttcgtttccacgaggactgtatttaacttctacttagcaatttcattattaa 22626411  T
Q  393 aaaggatgtataaatttatattggtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaattga 492  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  ||||||||||    
T  22626412 aaaggatgtataaatttatattggtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggattt--agaaaattga 22626509  T
Q  493 gagaagtatggttaagtccttcgaatcctctaaagttctcctatg 537  Q
    |||||||||||||||||||||||||||||| |||| |||||||||    
T  22626510 gagaagtatggttaagtccttcgaatcctccaaagctctcctatg 22626554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 291 - 537
Target Start/End: Original strand, 11138568 - 11138812
Alignment:
Q  291 attgataaatatttggcaagtgaatcaaattcgatcgaagtaataaaaagttcgttttcacgaggactgtatttaacttctacttagcaatttcattatt 390  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  11138568 attgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaagttcgtttccacgaggactgtatttaacttctacttagcaatttcattatt 11138667  T
Q  391 aaaaaggatgtataaatttatattggtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaatt 490  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||   || ||||||||    
T  11138668 aaaaaggatgtataaatttatattggtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaatatagaattgg--attcagaaaatt 11138765  T
Q  491 gagagaagtatggttaagtccttcgaatcctctaaagttctcctatg 537  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||    
T  11138766 gagagaagtatggttaagtccttcgaatcctccaaagctctcctatg 11138812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 292 - 522
Target Start/End: Original strand, 39563509 - 39563739
Alignment:
Q  292 ttgataaatatttggcaagtgaatcaaattcgatcgaagtaataaaaagttcgttttcacgaggactgtatttaacttctacttagcaatttcattatta 391  Q
    |||||| |||||||||||||||| ||||||| ||| |||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||| |    
T  39563509 ttgatagatatttggcaagtgaaccaaattcaatcaaagtaataaaaaattcgtttccacgaggactgta-ttaacttctacttagcaatttcattataa 39563607  T
Q  392 aaaaggatgtat-aaatttatattggtgccctaggcagttgagttgatttagtaacataaac-tgattaaaaacaataaagaattggtttttaagaaaat 489  Q
    |||||||||| | ||||||||||| ||||||||||||||||||||||||| |||||||||||   |||||||| | ||||  |||||||||  |||||||    
T  39563608 aaaaggatgtgtaaaatttatattagtgccctaggcagttgagttgattttgtaacataaacaaaattaaaaatagtaaaagattggtttt--agaaaat 39563705  T
Q  490 -tgagagaagtatggttaagtccttcgaatcctc 522  Q
     ||||||||| |||||||||||||||||||||||    
T  39563706 ctgagagaagaatggttaagtccttcgaatcctc 39563739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 25 - 148
Target Start/End: Complemental strand, 26761882 - 26761759
Alignment:
Q  25 aaagacagcggttttccagtacaatgaatgtgaaagatttctttcttataatcggtgacaactttttgtcttttacactactaccattttcagcattttc 124  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  26761882 aaagacagcggttttccagtacaatgaatgtgaaagatttctttcttataatcagtgacaactttttgtcttttacactactaccattttcagcattttc 26761783  T
Q  125 tcaaaaagctaaacatattcagtt 148  Q
    ||||||||||||||||||||||||    
T  26761782 tcaaaaagctaaacatattcagtt 26761759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 129 - 289
Target Start/End: Complemental strand, 26761746 - 26761592
Alignment:
Q  129 aaagctaaacatattcagttgatgccgatgtaacaaaaacaaattgtacaactaaaatagagtaattttttatatatataattaaggtattatttatgtg 228  Q
    |||||| | |||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||| |||||    
T  26761746 aaagcttaccatattcagttgatgccgatgtaacaaaaacaaat----------aaatagagtaattttttatatatataattaaggtattattcatgtg 26761657  T
Q  229 caactgcaaaaattggttcgttcga----aggtaacttatattcatttaaaaggttgacatctta 289  Q
    ||||||||||||||||||||||| |    |||||||||||||||||||||||| |||||||||||    
T  26761656 caactgcaaaaattggttcgttcaaagctaggtaacttatattcatttaaaagattgacatctta 26761592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 336 - 437
Target Start/End: Original strand, 20536379 - 20536479
Alignment:
Q  336 aaaagttcgttttcacgaggactgtatttaacttctacttagcaatttcattattaaaaaggatgta-taaatttatattggtgccctaggcagttgagt 434  Q
    ||||| |||| | ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||   |  ||||||||||||||||| ||    
T  20536379 aaaagatcgtatccacgaggactgtatttaacttctacttagaaatttcattattaaaaaggatgtagtaaatt--caagggtgccctaggcagttgggt 20536476  T
Q  435 tga 437  Q
    |||    
T  20536477 tga 20536479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 454
Target Start/End: Complemental strand, 35366562 - 35366459
Alignment:
Q  350 acgaggactgtatttaacttctacttagcaatttcattattaaaaaggatgtataaatttatattggtgccctaggcagttgagttgat-ttagtaacat 448  Q
    |||||||| ||  |||||||||||||||||||||||||| |||||||||||||| || || ||  | ||||||||||||| |||||| | || |||||||    
T  35366562 acgaggaccgttgttaacttctacttagcaatttcatta-taaaaaggatgtattaaatttta-ggttgccctaggcagtcgagttggtatttgtaacat 35366465  T
Q  449 aaactg 454  Q
    ||||||    
T  35366464 aaactg 35366459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 285 - 411
Target Start/End: Complemental strand, 19869351 - 19869223
Alignment:
Q  285 tcttaaattgataaatatttggcaagtgaatcaaattcgatcgaagtaataa-aaagttcgttttcacgaggactgtatttaacttctacttagcaattt 383  Q
    |||| |||||||| |||||||||||||| |  ||| || ||| ||||| ||| ||||||||| | ||||||||| ||  |||| ||||||||||||| ||    
T  19869351 tctttaattgatagatatttggcaagtgtactaaaatctatcaaagtagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagtt 19869252  T
Q  384 cattattaaaaaggatgta-taaatttat 411  Q
    | |||  | |||||||||| |||||||||    
T  19869251 cgttaaaataaaggatgtagtaaatttat 19869223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 292 - 403
Target Start/End: Complemental strand, 46731700 - 46731589
Alignment:
Q  292 ttgataaatatttggcaagtgaatcaaattcgatcgaagtaataaa-aagttcgttttcacgaggactgtatttaacttctacttagcaatttcattatt 390  Q
    |||||| | |||||||||||||| ||||  | ||||||||||| || || || || | ||||||||| ||  |||||||||||| ||||||||| ||||     
T  46731700 ttgatagagatttggcaagtgaa-caaaaactatcgaagtaatgaataaatttgtatccacgaggaccgttgttaacttctactcagcaatttctttatc 46731602  T
Q  391 aaaaaggatgtat 403  Q
    |||||||||||||    
T  46731601 aaaaaggatgtat 46731589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 478 - 537
Target Start/End: Complemental strand, 13979548 - 13979488
Alignment:
Q  478 ttttaagaaaatt-gagagaagtatggttaagtccttcgaatcctctaaagttctcctatg 537  Q
    ||||||||| ||| |||||||||||||||||| |||| ||||||||  ||| |||||||||    
T  13979548 ttttaagaatattagagagaagtatggttaagacctttgaatcctccgaagctctcctatg 13979488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 201; Significance: 1e-109; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 293 - 537
Target Start/End: Original strand, 23759609 - 23759852
Alignment:
Q  293 tgataaatatttggcaagtgaatcaaattcgatcgaagtaataaaaagttcgttttcacgaggactgtatttaacttctacttagcaatttcattattaa 392  Q
    ||||| |||||||||||||||| ||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||| ||||    
T  23759609 tgatagatatttggcaagtgaaccaaattcaatcgaagtaataaaaagttcgtttctacgaggactgtatttaacttctacttagcaaattcatt-ttaa 23759707  T
Q  393 aaaggatgtataaatttatattggtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaattga 492  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  23759708 aaaggatgtataaatttatattggtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaatcga 23759807  T
Q  493 gagaagtatggttaagtccttcgaatcctctaaagttctcctatg 537  Q
    |||||||||||||||||||||||||||||| |||| |||||||||    
T  23759808 gagaagtatggttaagtccttcgaatcctccaaagctctcctatg 23759852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 292 - 519
Target Start/End: Complemental strand, 11279737 - 11279511
Alignment:
Q  292 ttgataaatatttggcaagtgaatcaaattcgatcgaagtaataaaaagttcgttttcacgaggactgtatttaacttctacttagcaatttcattatta 391  Q
    ||||| ||||||||||||||||| ||||||| |||||||||||||||| || |||| ||| |||||| ||||||| ||||||||||||||||||||||||    
T  11279737 ttgatgaatatttggcaagtgaaccaaattcaatcgaagtaataaaaattt-gtttccacaaggactatatttaatttctacttagcaatttcattatta 11279639  T
Q  392 aaaaggatgtataaa-tttatattggtgccctaggcagttgagttgatttagtaacataaactgattaaaaac-aataaagaattggtttttaagaaaat 489  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||||||||| |||| ||    
T  11279638 aaaaggatgtataaaatttatattggtgccctaggcagttgagttgattttgtaacataaactgattaaaaacgaataaag-attggttttt-agaagat 11279541  T
Q  490 tgagagaagtatggttaagtccttcgaatc 519  Q
    ||||||||||||||||||||||||||||||    
T  11279540 tgagagaagtatggttaagtccttcgaatc 11279511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 299 - 537
Target Start/End: Original strand, 36222315 - 36222552
Alignment:
Q  299 atatttggcaagtgaatcaaattcgatcgaagtaataaaaagttcgttttcacgaggactgtatttaacttctacttagcaatttcattattaaaaagga 398  Q
    ||||||||||| |||| ||||||| || ||||||||||||| ||||||  |||||||| ||||||||| |||||| ||||||||||||||||||||||||    
T  36222315 atatttggcaaatgaaccaaattcaattgaagtaataaaaa-ttcgttaccacgaggattgtatttaatttctacgtagcaatttcattattaaaaagga 36222413  T
Q  399 tgtataaa-tttatattggtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaattgagagaa 497  Q
    |||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||  ||  |||||||||| |||| ||||||||||    
T  36222414 tgtataaaatttatattggtgccctaggcagttgagttgattttctaacataaactgattaaaaacaaagaaagattggttttt-agaagattgagagaa 36222512  T
Q  498 gtatggttaagtccttcgaatcctctaaagttctcctatg 537  Q
    |||||||||||||||||||||||||  |||||||||||||    
T  36222513 gtatggttaagtccttcgaatcctccgaagttctcctatg 36222552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 301 - 537
Target Start/End: Original strand, 46846320 - 46846556
Alignment:
Q  301 atttggcaagtgaatcaaattcgatcgaagtaataaaaagttcgttttcacgaggactgtatttaacttctacttagcaatttcattattaaaaaggatg 400  Q
    ||||||||||||||||| |||| ||||||||||||||||  | |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  46846320 atttggcaagtgaatcagattcaatcgaagtaataaaaatat-gtttccacgaggactgtatttaatttctacttagcaatttcattattaaaaaggatg 46846418  T
Q  401 tat-aaatttatattggtgccctaggcagttgagttgatttagtaacataaactga-ttaaaaacaataaagaattggtttttaagaaaattgagagaag 498  Q
    ||| |||||||||||||||||||||||||||||||||| ||  ||  ||||||||| | ||||||||||||  |||||||||| ||||||||||||||||    
T  46846419 tataaaatttatattggtgccctaggcagttgagttgaattcttattataaactgactaaaaaacaataaaagattggttttt-agaaaattgagagaag 46846517  T
Q  499 tatggttaagtccttcgaatcctctaaagttctcctatg 537  Q
    ||||||||||||||||||||||||  ||||||| |||||    
T  46846518 tatggttaagtccttcgaatcctccgaagttcttctatg 46846556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 293 - 537
Target Start/End: Complemental strand, 33313239 - 33312996
Alignment:
Q  293 tgataaatatttggcaagtgaatcaaattcgatcgaagtaataaaaagttcgttttcacgaggactgtatttaacttctacttagcaatttcattattaa 392  Q
    ||||| |||||||  ||||||| ||||||| |||||||||||||||| |||||||  |||||||||||||| ||||||||||||||||||||||||||||    
T  33313239 tgatagatatttgagaagtgaaacaaattcaatcgaagtaataaaaa-ttcgtttctacgaggactgtatt-aacttctacttagcaatttcattattaa 33313142  T
Q  393 aaaggatgtataaa-tttatattggtgccctaggcagttgagttgatttagtaacataaactg-attaaaaacaataaagaattggtttttaagaaaat- 489  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||| ||||||||||| | |||||||| ||||||| |||||||||  |||||||     
T  33313141 aaaggatgtgtaaaatttatattggtgccctaggcagttgagttgattttgtaacataaacggaattaaaaataataaaggattggtttt--agaaaatc 33313044  T
Q  490 tgagagaagtatggttaagtccttcgaatcctctaaagttctcctatg 537  Q
    ||||||||  |||||||||||||||||||||||| ||| |||||||||    
T  33313043 tgagagaaaaatggttaagtccttcgaatcctctgaagctctcctatg 33312996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 299 - 537
Target Start/End: Complemental strand, 295100 - 294866
Alignment:
Q  299 atatttggcaagtgaatcaaattcgatcgaagtaataaaaagttcgttttcacgaggactgtatttaacttctacttagcaatttcattattaaaaagga 398  Q
    |||||||||||||||| ||||||| |||||||||||||||| || || | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  295100 atatttggcaagtgaaccaaattcaatcgaagtaataaaaaatttgtgtccacgaggactgtatttaacttctacttagcaatttcattattaaaaagga 295001  T
Q  399 tgt-ataaatttatattggtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaattgagagaa 497  Q
    ||| |||||||||||||| ||||| |||||||  ||||| ||| ||||||||| ||| |||||| |||  ||| |||||||||  |||||||||||||||    
T  295000 tgtaataaatttatattgatgcccgaggcagt--agttg-ttttgtaacataagctggttaaaagcaaataaggattggtttt--agaaaattgagagaa 294906  T
Q  498 gtatggttaagtccttcgaatcctctaaagttctcctatg 537  Q
    ||||||||||||| |||||||||||  |||||||||||||    
T  294905 gtatggttaagtctttcgaatcctccgaagttctcctatg 294866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 292 - 537
Target Start/End: Complemental strand, 6967394 - 6967149
Alignment:
Q  292 ttgataaatatttggcaagtgaatcaaattcgatcgaagtaataa-aaagttcgttttcacgaggactgtatttaacttctacttagcaatttcattatt 390  Q
    |||||| |||||||||||||| | ||||  | ||||||||| ||| ||||||||| | ||||||||| ||  |||| |||||||  |||||||| ||||     
T  6967394 ttgatagatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctactcggcaatttctttatc 6967295  T
Q  391 aaaaaggatgtataaatttatattg-gtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaat 489  Q
    |||||||||||||||||||||||||  |||||||||||||||||||| ||| |||||||||||  |   ||||||||||| | |||| |||| |||| ||    
T  6967294 aaaaaggatgtataaatttatattgattgccctaggcagttgagttg-ttttgtaacataaacgtaaataaaacaataaa-agttgg-ttttcagaatat 6967198  T
Q  490 t-gagagaagtatggttaagtccttcgaatcctctaaagttctcctatg 537  Q
    | |||||||||||||||||| |||||||||||||| |||||||||||||    
T  6967197 tagagagaagtatggttaagaccttcgaatcctctgaagttctcctatg 6967149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 293 - 537
Target Start/End: Original strand, 3861907 - 3862150
Alignment:
Q  293 tgataaatatttggcaagtgaatcaaattcgatcgaagtaataaaaagttcgttttcacgaggactgtatttaacttctacttagcaatttcattattaa 392  Q
    ||||| |||||||||||||| |  | | || |||||||||||||| | || || | |||||||| |||  |||||||||||||||||||||||||||| |    
T  3861907 tgatagatatttggcaagtgtactagagtcaatcgaagtaataaataatttgtatccacgaggattgttattaacttctacttagcaatttcattatt-a 3862005  T
Q  393 aaaggatgtataaatttatattggtgccctaggcagttgagttga--tttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaatt 490  Q
    ||||||||||| || ||  | || |||||||||||||| | ||||  ||| ||||||||||||||||||||||||||||  |||||||||  | ||||||    
T  3862006 aaaggatgtattaaatt-caatgatgccctaggcagttcaattgattttttgtaacataaactgattaaaaacaataaaagattggtttt--ataaaatt 3862102  T
Q  491 -gagagaagtatggttaagtccttcgaatcctctaaagttctcctatg 537  Q
     |||||||||||| ||||| ||||||||||||   |||||||||||||    
T  3862103 agagagaagtatgattaagaccttcgaatccttcgaagttctcctatg 3862150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 292 - 537
Target Start/End: Original strand, 17866352 - 17866597
Alignment:
Q  292 ttgataaatatttggcaagtgaatcaaattcgatcgaagtaataa-aaagttcgttttcacgaggactgtatttaacttctacttagcaatttcattatt 390  Q
    |||||| |||||||||||||| | ||||  | ||||||||| ||| ||||||||| | ||||||||| ||  |||| |||||||  |||||||| ||||     
T  17866352 ttgatagatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctactcggcaatttctttatc 17866451  T
Q  391 aaaaaggatgtataaatttatattg-gtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaat 489  Q
    |||||||||||||||||||||||||  ||||||||||||||||| || ||| |||||||||||  |   ||||||||||| | |||| |||| |||| ||    
T  17866452 aaaaaggatgtataaatttatattgattgccctaggcagttgagctg-ttttgtaacataaacgtaaataaaacaataaa-agttgg-ttttcagaatat 17866548  T
Q  490 t-gagagaagtatggttaagtccttcgaatcctctaaagttctcctatg 537  Q
    | ||||||||||||||| || |||||||||||||| |||||||||||||    
T  17866549 tagagagaagtatggtttagaccttcgaatcctctgaagttctcctatg 17866597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 324 - 537
Target Start/End: Complemental strand, 24783624 - 24783410
Alignment:
Q  324 atcgaagtaataaa-aagttcgttttcacgaggactgtatttaacttctacttagcaatttcatt-attaaaaaggatgtataaatttatattggt-gcc 420  Q
    |||||||||||||| || || || | ||||||||| ||  |||| |||||||  |||||||| || || ||||||||||||||||||||||||| | | |    
T  24783624 atcgaagtaataaataaatttgtatccacgaggaccgttgttaatttctactcggcaatttcttttatcaaaaaggatgtataaatttatattgattgtc 24783525  T
Q  421 ctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaatt-gagagaagtatggttaagtccttcgaatc 519  Q
    | |||||||||||||| ||| |||||||||||| |   ||||||||||| | |||||||| ||||| ||| |||||||||||||||||| |||| |||||    
T  24783524 caaggcagttgagttgtttt-gtaacataaacttaaataaaacaataaa-agttggtttt-aagaatattagagagaagtatggttaagacctttgaatc 24783428  T
Q  520 ctctaaagttctcctatg 537  Q
    |||  |||||||| ||||    
T  24783427 ctccgaagttctcatatg 24783410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 415 - 537
Target Start/End: Original strand, 23313382 - 23313504
Alignment:
Q  415 ggtgccctaggcagttgagttgattta-gtaacataaactgattaaaaacaataaagaattggtttttaagaaaatt-gagagaagtatggttaagtcct 512  Q
    ||||||||||| |||||| |||||||  |||||||||||  |||||||||||||||  | |||||||  |||||||| |||||||||||||||||| |||    
T  23313382 ggtgccctaggtagttgaattgatttttgtaacataaacgaattaaaaacaataaaagaatggtttt--agaaaattagagagaagtatggttaagacct 23313479  T
Q  513 tcgaatcctctaaagttctcctatg 537  Q
    | ||||||||  |||||||||||||    
T  23313480 ttgaatcctccgaagttctcctatg 23313504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 400 - 537
Target Start/End: Original strand, 17863202 - 17863338
Alignment:
Q  400 gtataaatttatattggt-gccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaatt-gagagaa 497  Q
    |||||||||||||||| | |||||||||||||||| || ||| |||||||||||  |   ||||||||||| | |||||||| | ||| ||| |||||||    
T  17863202 gtataaatttatattgattgccctaggcagttgagctgtttt-gtaacataaacgtaaataaaacaataaa-agttggttttca-gaatattagagagaa 17863298  T
Q  498 gtatggttaagtccttcgaatcctctaaagttctcctatg 537  Q
    ||||||||||| |||||||||||||| |||||||||||||    
T  17863299 gtatggttaagaccttcgaatcctctgaagttctcctatg 17863338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 478 - 537
Target Start/End: Complemental strand, 9765863 - 9765803
Alignment:
Q  478 ttttaagaaaatt-gagagaagtatggttaagtccttcgaatcctctaaagttctcctatg 537  Q
    ||||||||| ||| |||||||||||||||||| |||||||||||||| |||||||||||||    
T  9765863 ttttaagaatattagagagaagtatggttaagaccttcgaatcctctgaagttctcctatg 9765803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 420 - 537
Target Start/End: Complemental strand, 23108106 - 23107989
Alignment:
Q  420 cctaggcagttgagttgat-ttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaatt-gagagaagtatggttaagtccttcgaa 517  Q
    ||||| ||||||||||||| || |||||||||||  |||||||||||||||  |||||||||  |||||||| ||||||| | |||||||| ||||||||    
T  23108106 cctagacagttgagttgatgtttgtaacataaacgaattaaaaacaataaaagattggtttt--agaaaattagagagaaatgtggttaagaccttcgaa 23108009  T
Q  518 tcctctaaagttctcctatg 537  Q
    || ||  ||| |||||||||    
T  23108008 tcatccgaagctctcctatg 23107989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 293 - 408
Target Start/End: Original strand, 17857880 - 17857996
Alignment:
Q  293 tgataaatatttggcaagtgaatcaaattcgatcgaagtaataa-aaagttcgttttcacgaggactgtatttaacttctacttagcaatttcattatta 391  Q
    ||||| |||||||||||||| | ||||  | |||||| || ||| ||||||||| | ||||||||| ||  |||| |||||||  |||||||| |||| |    
T  17857880 tgatagatatttggcaagtgtaccaaaagctatcgaaatagtaataaagttcgtatccacgaggaccgttgttaatttctactcggcaatttctttatca 17857979  T
Q  392 aaaaggatgtataaatt 408  Q
    |||||||||||||||||    
T  17857980 aaaaggatgtataaatt 17857996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 290 - 411
Target Start/End: Original strand, 3540921 - 3541042
Alignment:
Q  290 aattgataaatatttggcaagtgaatcaaattcgatcgaagtaataa-aaagttcgttttcacgaggactgtatttaacttctacttagcaatttcatta 388  Q
    ||||||||||||||||||||||| | ||||  | ||| ||||| ||| ||||||||| | ||||||||| ||  | |||||||||||||||| ||| |||    
T  3540921 aattgataaatatttggcaagtgtaccaaaa-ctatcaaagtagtaataaagttcgtatccacgaggaccgttgtgaacttctacttagcaagttcgtta 3541019  T
Q  389 ttaaaaaggatgtataaatttat 411  Q
      | ||||||||||| |||||||    
T  3541020 aaataaaggatgtattaatttat 3541042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 491 - 537
Target Start/End: Original strand, 36843135 - 36843181
Alignment:
Q  491 gagagaagtatggttaagtccttcgaatcctctaaagttctcctatg 537  Q
    |||||||||||||||||| |||||||||||||  |||||||||||||    
T  36843135 gagagaagtatggttaagaccttcgaatcctccgaagttctcctatg 36843181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0440 (Bit Score: 183; Significance: 1e-98; HSPs: 1)
Name: scaffold0440
Description:

Target: scaffold0440; HSP #1
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 292 - 537
Target Start/End: Complemental strand, 10110 - 9865
Alignment:
Q  292 ttgataaatatttggcaagtgaatcaaattcgatcgaagtaataaaa-agttcgttttcacgaggactgtatttaacttctacttagcaatttcattatt 390  Q
    |||||| | |||||||||||||||||||||||||||||||||||||| | ||||||| | |  |||||||||||||||||||||||||||||||||||||    
T  10110 ttgatagaaatttggcaagtgaatcaaattcgatcgaagtaataaaagaattcgtttcctcagggactgtatttaacttctacttagcaatttcattatt 10011  T
Q  391 aaaaaggatgtataaatttatattggtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaatt 490  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  10010 aaaaaggatgtataaatttatattggtcccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaataattggttttt-agaaaatt 9912  T
Q  491 gagagaagtatggttaagtccttcgaatcctctaaagttctcctatg 537  Q
    ||||||||||||||||||||||||||||||||  ||| |||||||||    
T  9911 gagagaagtatggttaagtccttcgaatcctccgaagctctcctatg 9865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 162; Significance: 3e-86; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 291 - 479
Target Start/End: Complemental strand, 12172220 - 12172031
Alignment:
Q  291 attgataaatatttggcaagtgaatcaaattcgatcgaagtaataaaaa-gttcgttttcacgaggactgtatttaacttctacttagcaatttcattat 389  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||| | |||||| |||||||||||||||||||||||||||||||||||||||||    
T  12172220 attgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaagatcgtttccacgaggactgtatttaacttctacttagcaatttcattat 12172121  T
Q  390 taaaaaggatgtataaatttatattggtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggttt 479  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  12172120 taaaaaggatgtataaatttatattggtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagatttggttt 12172031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 293 - 537
Target Start/End: Complemental strand, 2542128 - 2541886
Alignment:
Q  293 tgataaatatttggcaagtgaatcaaattcgatcgaagtaataaaaagttcgttttcacgaggactgtatttaacttctacttagcaatttcattattaa 392  Q
    ||||| |||||||||||||| | |||| || |||||||||||||| | ||||| | |||||||||||||||||||||||||| |||||||||||||||||    
T  2542128 tgatagatatttggcaagtgtaccaaagtcaatcgaagtaataaataattcgtatccacgaggactgtatttaacttctactgagcaatttcattattaa 2542029  T
Q  393 aaaggatgtataaatttatattggtgccctaggcagttgagttgatt-tagtaacataaactgattaaaaacaataaagaattggtttttaagaaaattg 491  Q
    ||||||||||| || ||  | |||||||||||||||||||||| ||| | ||||||||||| ||||||||||||||||  || |||||||  |||||||     
T  2542028 aaaggatgtattaaatt-caatggtgccctaggcagttgagtttattcttgtaacataaacggattaaaaacaataaaatataggttttt-tgaaaatt- 2541932  T
Q  492 agagaagtatggttaagtccttcgaatcctctaaagttctcctatg 537  Q
    | ||| ||||||||||| |||||||||||||| |||||||| ||||    
T  2541931 aaagaggtatggttaagaccttcgaatcctctgaagttctcttatg 2541886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 292 - 537
Target Start/End: Original strand, 647202 - 647447
Alignment:
Q  292 ttgataaatatttggcaagtgaatcaaattcgatcgaagtaataa-aaagttcgttttcacgaggactgtatttaacttctacttagcaatttcattatt 390  Q
    ||||||||||||||||||||| | ||||  | ||||||||| ||| |||||| || | ||||||||| ||  |||| |||||||  |||||||| ||||     
T  647202 ttgataaatatttggcaagtgtaccaaaagctatcgaagtagtaataaagtttgtatccacgaggaccgttgttaatttctactcggcaatttctttatc 647301  T
Q  391 aaaaaggatgtataaatttatattg-gtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaat 489  Q
    |||||||||||||||||||||||||  ||||||||||| |||||||| ||| |||||||||||  |   ||||||||||| | |||| |||| |||| ||    
T  647302 aaaaaggatgtataaatttatattgattgccctaggcatttgagttg-ttttgtaacataaacgtaaataaaacaataaa-agttgg-ttttcagaatat 647398  T
Q  490 t-gagagaagtatggttaagtccttcgaatcctctaaagttctcctatg 537  Q
    | ||||||||||||||||||  ||||||||||||| |||||||||||||    
T  647399 tagagagaagtatggttaagatcttcgaatcctctgaagttctcctatg 647447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 292 - 537
Target Start/End: Original strand, 650474 - 650719
Alignment:
Q  292 ttgataaatatttggcaagtgaatcaaattcgatcgaagtaataa-aaagttcgttttcacgaggactgtatttaacttctacttagcaatttcattatt 390  Q
    ||||||||||||||||||||| | ||||  | ||||||||| ||| |||||| || | ||||||||| ||  |||| |||||||  ||||||||  |||     
T  650474 ttgataaatatttggcaagtgtaccaaaagctatcgaagtagtaataaagtttgtatccacgaggaccgttgttaatttctactcggcaatttctatatc 650573  T
Q  391 aaaaaggatgtataaatttatattg-gtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaat 489  Q
    |||||||||||||||||||||||||  ||||||||||| |||||||| ||| |||||||||||  |   ||||||||||| | |||||||| |  | | |    
T  650574 aaaaaggatgtataaatttatattgattgccctaggcatttgagttg-ttttgtaacataaacgtaaataaaacaataaa-agttggttttcataatatt 650671  T
Q  490 tgagagaagtatggttaagtccttcgaatcctctaaagttctcctatg 537  Q
     |||||||||||||||||| |||||||||||||| |||||||||||||    
T  650672 agagagaagtatggttaagaccttcgaatcctctgaagttctcctatg 650719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 292 - 537
Target Start/End: Original strand, 26062689 - 26062937
Alignment:
Q  292 ttgataaatatttggcaagtgaatcaaattcgatcgaagtaataaa-aagttcgttttcacgaggact--gtatttaacttctacttagcaatttcatta 388  Q
    |||||||| |||||||||||||| ||||  | |||||| ||||||| || ||||| | |||||||||   ||  |||||||||||| | ||||||| |||    
T  26062689 ttgataaagatttggcaagtgaaccaaaa-ctatcgaaataataaataaattcgtatccacgaggaccccgttgttaacttctactcaacaatttcttta 26062787  T
Q  389 ttaaaaaggatgtataaatttatattggtgccctaggcagttgagttgat-ttagtaacataaactgattaaaaacaataaagaattggtttttaagaaa 487  Q
    | ||||||||||||| || ||  |  | ||||||||| |||||  ||| | || |||| |||||| ||||||||||||||||   ||||||||  |||||    
T  26062788 tcaaaaaggatgtattaaattcaag-gttgccctaggtagttggattggtatttgtaaaataaacggattaaaaacaataaaagtttggtttt--agaaa 26062884  T
Q  488 att---gagagaagtatggttaagtccttcgaatcctctaaagttctcctatg 537  Q
    |||   |||||| ||||||||||| |||| ||||||||  |||||||||||||    
T  26062885 attagagagagatgtatggttaagacctttgaatcctccgaagttctcctatg 26062937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 485 - 537
Target Start/End: Complemental strand, 26060641 - 26060589
Alignment:
Q  485 aaaattgagagaagtatggttaagtccttcgaatcctctaaagttctcctatg 537  Q
    |||||||||||||| ||||||||| |||||||||||||  |||||||||||||    
T  26060641 aaaattgagagaagcatggttaagaccttcgaatcctccgaagttctcctatg 26060589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 489 - 537
Target Start/End: Original strand, 11649429 - 11649477
Alignment:
Q  489 ttgagagaagtatggttaagtccttcgaatcctctaaagttctcctatg 537  Q
    |||||||||| ||||||||| |||||||||||||  |||||||||||||    
T  11649429 ttgagagaagcatggttaagaccttcgaatcctccgaagttctcctatg 11649477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 146; Significance: 1e-76; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 301 - 537
Target Start/End: Original strand, 24193 - 24426
Alignment:
Q  301 atttggcaagtgaatcaaattcgatcgaagtaataaaaagttcgttttcacgaggactgtatttaacttctacttagcaatttcattattaaaaaggatg 400  Q
    |||||||||||| | ||||  | ||||||||| ||| || || |||| |||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  24193 atttggcaagtgtaccaaaagctatcgaagtagtaataaatttgtttccacgaggactgtatttaacttctactcaacaatttcattattaaaaaggatg 24292  T
Q  401 tataaatttatattggtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaattgagagaagta 500  Q
    ||||||||  ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| |||||||||||||||| |    
T  24293 tataaattattattggtgccctaggcagttgagttgatttagta--ataaactgattaaaaacaataaagaattggttttt-agaaaattgagagaagca 24389  T
Q  501 tggttaagtccttcgaatcctctaaagttctcctatg 537  Q
    ||||||||||||||||||||||  ||| |||||||||    
T  24390 tggttaagtccttcgaatcctccgaagctctcctatg 24426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 106; Significance: 9e-53; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 292 - 522
Target Start/End: Original strand, 12575299 - 12575528
Alignment:
Q  292 ttgataaatatttggcaagtgaatcaaattcgatcgaagtaataaaaagttcgttttcacgaggactgtatttaacttctacttagcaatttcattatta 391  Q
    ||||||||||||||||||||| | ||||||| |||||||||||||| | ||||| | ||||||||||||  |||||||||||| | ||| ||||||||||    
T  12575299 ttgataaatatttggcaagtgtaccaaattcaatcgaagtaataaataattcgtatccacgaggactgttgttaacttctactcaacaagttcattatta 12575398  T
Q  392 aaaaggatgtataaatttatattggtgccctaggcagttgagttga-tttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaatt 490  Q
    |||||||||||| || ||  | |||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||  |||||||||  ||||||||    
T  12575399 aaaaggatgtattaaatt-caatggtgccctaggcagttgagttgatttttgtaacataaattgattaaaaacaataaaagattggtttt--agaaaatt 12575495  T
Q  491 -gagagaagtatggttaagtccttcgaatcctc 522  Q
     |||||||||||||||||| || | ||||||||    
T  12575496 agagagaagtatggttaagaccattgaatcctc 12575528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 292 - 537
Target Start/End: Complemental strand, 14418708 - 14418467
Alignment:
Q  292 ttgataaatatttggcaagtgaatcaaattcgatcgaagtaataaaaagttcgttttcacgaggactgtatttaacttctacttagcaatttcattatta 391  Q
    |||||| || ||||||||||||| ||||  | ||||||||| |||| | ||||||  ||||||||| ||  |||||| | ||||||||||||| |||| |    
T  14418708 ttgatagatttttggcaagtgaaccaaag-ctatcgaagtagtaaataattcgttc-cacgaggaccgttgttaactacaacttagcaatttctttatca 14418611  T
Q  392 aaaaggatgtataaatttatattggtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaatt- 490  Q
    |||||||| | | || ||  || | |||||||||||||||||||| |||  ||||||||||  ||||||||||||||| | |||||||| ||||| |||     
T  14418610 aaaaggatatgttaaattcaatggttgccctaggcagttgagttggtttt-taacataaacaaattaaaaacaataaa-agttggtttt-aagaatatta 14418514  T
Q  491 gagagaagtatggttaagtccttcgaatcctctaaagttctcctatg 537  Q
    |||||||||||||||||| | |||||||||||  || ||||||||||    
T  14418513 gagagaagtatggttaagacattcgaatcctccgaatttctcctatg 14418467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 415 - 537
Target Start/End: Original strand, 41778864 - 41778985
Alignment:
Q  415 ggtgccctaggcagttgagttga-tttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaatt-gagagaagtatggttaagtcct 512  Q
    |||||||||||||||||| |||| ||| |||||||||||  |||||||||||||||  |||| |||   |||| |||  ||||||||||||||||| |||    
T  41778864 ggtgccctaggcagttgaattgatttttgtaacataaacgaattaaaaacaataaaagattgattt---agaagattaaagagaagtatggttaagacct 41778960  T
Q  513 tcgaatcctctaaagttctcctatg 537  Q
    || |||| ||  |||||||||||||    
T  41778961 tcaaatcttccgaagttctcctatg 41778985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 458 - 538
Target Start/End: Complemental strand, 13097100 - 13097021
Alignment:
Q  458 aaaaacaataaagaattggtttttaagaaaatt-gagagaagtatggttaagtccttcgaatcctctaaagttctcctatgt 538  Q
    ||||||||||||  ||| |||||  |||||||| |||||||||||||||||| |||||||||||||  ||||| ||||||||    
T  13097100 aaaaacaataaaagattagtttt--agaaaattagagagaagtatggttaagaccttcgaatcctccgaagttatcctatgt 13097021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 489 - 537
Target Start/End: Original strand, 41836418 - 41836466
Alignment:
Q  489 ttgagagaagtatggttaagtccttcgaatcctctaaagttctcctatg 537  Q
    |||||||||| ||||||||| |||||||||||||  |||||||||||||    
T  41836418 ttgagagaagcatggttaagaccttcgaatcctccgaagttctcctatg 41836466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 293 - 411
Target Start/End: Complemental strand, 9467429 - 9467309
Alignment:
Q  293 tgataaatatttggcaagtgaatcaaattcgatcgaagtaataa-aaagttcgttttcacgaggactgtatttaacttctacttagcaatttcattatta 391  Q
    ||||| |||||||||||||| | ||||  | ||||||||| ||| ||||||||| | ||||||||| ||  |||| |||| |||||||| ||| |||  |    
T  9467429 tgatagatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttcttcttagcaagttcgttaaaa 9467330  T
Q  392 aaaaggatgta-taaatttat 411  Q
     |||||||||| |||||||||    
T  9467329 taaaggatgtagtaaatttat 9467309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 85; Significance: 3e-40; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 292 - 537
Target Start/End: Complemental strand, 13493509 - 13493264
Alignment:
Q  292 ttgataaatatttggcaagtgaatcaaattcgatcgaagtaataa-aaagttcgttttcacgaggactgtatttaacttctacttagcaatttcattatt 390  Q
    |||||| |||||||||||||| | ||||  | ||||||||| ||| ||||||||| | ||||||||| ||  |||| |||||||  |||||||| ||||     
T  13493509 ttgatagatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctactcggcaatttctttatc 13493410  T
Q  391 aaaaaggatgtataaatttatattg-gtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaat 489  Q
    |||||||||||||||||||||||||  |||||||||||||||||||| ||| |||||||||||  |   ||||||||||| | |||| |||| |||| ||    
T  13493409 aaaaaggatgtataaatttatattgattgccctaggcagttgagttg-ttttgtaacataaacgtaaataaaacaataaa-agttgg-ttttcagaatat 13493313  T
Q  490 t-gagagaagtatggttaagtccttcgaatcctctaaagttctcctatg 537  Q
    | |||||||||||||||||| |||||||||||||| |||||||||||||    
T  13493312 tagagagaagtatggttaagaccttcgaatcctctgaagttctcctatg 13493264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 293 - 537
Target Start/End: Complemental strand, 10765165 - 10764921
Alignment:
Q  293 tgataaatatttggcaagtgaatcaaattcgatcgaagtaataa-aaagttcgttttcacgaggactgtatttaacttctacttagcaatttcattatta 391  Q
    ||||| |||||||||||||| | ||||  | ||||||||| ||| ||||||||| | ||||||||| ||  |||| |||||||  |||||||| |||| |    
T  10765165 tgatagatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctactcggcaatttctttatca 10765066  T
Q  392 aaaaggatgtataaatttatattg-gtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaatt 490  Q
    ||||||||||||||||||||||||  |||||||||||||||||||| ||| |||||||||||  |   ||||||||||| | |||| |||| |||| |||    
T  10765065 aaaaggatgtataaatttatattgattgccctaggcagttgagttg-ttttgtaacataaacgtaaataaaacaataaa-agttgg-ttttcagaatatt 10764969  T
Q  491 -gagagaagtatggttaagtccttcgaatcctctaaagttctcctatg 537  Q
     |||||||||||||||||| |||||||||||||| |||||||||||||    
T  10764968 agagagaagtatggttaagaccttcgaatcctctgaagttctcctatg 10764921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 294 - 537
Target Start/End: Complemental strand, 1936873 - 1936628
Alignment:
Q  294 gataaatatttggcaagtgaatcaaattcgatcgaagtaataaaaagttcgttttcacgaggactgtatttaacttctacttagcaatttcattattaaa 393  Q
    |||| |||||||||||||||| ||||||| ||||||||||| || | ||| ||| ||| | |||  |  ||||||||||||| |||||||||||| |||     
T  1936873 gatagatatttggcaagtgaaccaaattcaatcgaagtaatgaataattcatttccacaatgaccattgttaacttctacttggcaatttcattagtaat 1936774  T
Q  394 aaggatgtataaatttatattggt-gccctaggcagttgagttgatt-tagtaacataaactga-ttaaaaacaataaagaattggtttttaagaaaatt 490  Q
    || ||||||| || ||  || ||| | |||||||||||||||||||| | ||| |||||||||| ||||||||  ||||   ||||||||  ||||||||    
T  1936773 aacgatgtattaaattcaatgggttgacctaggcagttgagttgattgttgtatcataaactgaattaaaaacggtaaaattttggtttt--agaaaatt 1936676  T
Q  491 -gagagaagtatggttaagtccttcgaatcctctaaagttctcctatg 537  Q
     |||||||||||||||||| |||||||||||||  |||||||||||||    
T  1936675 agagagaagtatggttaagaccttcgaatcctccgaagttctcctatg 1936628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 324 - 537
Target Start/End: Complemental strand, 13496202 - 13495989
Alignment:
Q  324 atcgaagtaataaa-aagttcgttttcacgaggactgtatttaacttctacttagcaatttcattattaaaaaggatgtataaatttatattg-gtgccc 421  Q
    |||||||||||||| || ||||| | ||||||||| ||  |||| |||||||  |||||||| |||| |||||||||||||||||||||||||  || ||    
T  13496202 atcgaagtaataaataaattcgtatccacgaggaccgttgttaatttctactcggcaatttctttatcaaaaaggatgtataaatttatattgattgtcc 13496103  T
Q  422 taggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaatt-gagagaagtatggttaagtccttcgaatcc 520  Q
    ||||||||||| ||| ||| |||||||||||  |   ||||||||||  || | | ||||||||| ||| |||||||||||||||||| |||| ||||||    
T  13496102 taggcagttgaattg-ttttgtaacataaacgtaaataaaacaataa--aagttgattttaagaatattagagagaagtatggttaagacctttgaatcc 13496006  T
Q  521 tctaaagttctcctatg 537  Q
    ||  |||||||||||||    
T  13496005 tccgaagttctcctatg 13495989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 415 - 537
Target Start/End: Complemental strand, 34066468 - 34066346
Alignment:
Q  415 ggtgccctaggcagttgagttgattta-gtaacataaactgattaaaaacaataaagaattggtttttaagaaaatt-gagagaagtatggttaagtcct 512  Q
    |||||||||||||||||| |||||||  |||||||||||  |||||||||||||||  |||||||||  |||||||| |||||||||||||||||| |||    
T  34066468 ggtgccctaggcagttgaattgatttttgtaacataaacgaattaaaaacaataaaagattggtttt--agaaaattagagagaagtatggttaagacct 34066371  T
Q  513 tcgaatcctctaaagttctcctatg 537  Q
    ||||||||||  |||||||||||||    
T  34066370 tcgaatcctccgaagttctcctatg 34066346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 414 - 537
Target Start/End: Original strand, 16190299 - 16190421
Alignment:
Q  414 tggtgccctaggcagttgagttgat-ttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaattga-gagaagtatggttaagtcc 511  Q
    |||||||||||| | |||||||||| || |||||||||||  ||||||||||||||||| ||||||||  |||||||| | |||||||||||||||| ||    
T  16190299 tggtgccctaggaaattgagttgatgtttgtaacataaacgaattaaaaacaataaaga-ttggtttt--agaaaattaaagagaagtatggttaagacc 16190395  T
Q  512 ttcgaatcctctaaagttctcctatg 537  Q
    |||||||||||  |||||||||||||    
T  16190396 ttcgaatcctccgaagttctcctatg 16190421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 293 - 537
Target Start/End: Original strand, 32505857 - 32506098
Alignment:
Q  293 tgataaatatttggcaagtgaatcaaattcgatcgaagtaataaa-aagttcgttttcacgaggac---tgtat-ttaacttctacttagcaatttcatt 387  Q
    ||||| |||||||||||||||| ||||  | |||||||||||||| ||| |||| | |||||||||   || || ||||||||||||   ||||||| ||    
T  32505857 tgatagatatttggcaagtgaaccaaaa-ctatcgaagtaataaataagatcgtatccacgaggaccattgcatgttaacttctactcgacaatttcttt 32505955  T
Q  388 attaaaaaggatgtataaatttatattggtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttaagaaa 487  Q
    || ||||||||||||||||||||||||| |||   |||||||||      |||  ||||||||||  ||||||||||||||| | |||||||| |||||     
T  32505956 atcaaaaaggatgtataaatttatattgatgcgtgaggcagttg------ttttctaacataaacgaattaaaaacaataaa-agttggtttt-aagaat 32506047  T
Q  488 attg-agagaagtatggttaagtccttcgaatcctctaaagttctcctatg 537  Q
    |||  |||||||| |||||||| |||||||||||||  |||||||||||||    
T  32506048 attatagagaagtgtggttaagaccttcgaatcctccgaagttctcctatg 32506098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 363 - 537
Target Start/End: Complemental strand, 39546417 - 39546244
Alignment:
Q  363 ttaacttctacttagcaatttcattattaaaaaggatgtataaatttatattggtgccctaggcagttgagttgattta-gtaacataaactgattaaaa 461  Q
    ||||||| |||| ||||||||||||||  ||| |||||||| || ||  |||| |||||||||||||||  ||| |||  ||||| |||||  |   |||    
T  39546417 ttaacttttactcagcaatttcattatcgaaa-ggatgtattaaattcaattgttgccctaggcagttggattggtttttgtaacgtaaacgcaaataaa 39546319  T
Q  462 acaataaagaattggtttttaagaaaattgagagaagtatggttaagtccttcgaatcctctaaagttctcctatg 537  Q
    |||||||| | |||||||| || | | | |||||||||||||||||| |||||||||||||  |||||||| ||||    
T  39546318 acaataaa-agttggttttaaaaatattagagagaagtatggttaagaccttcgaatcctccgaagttctcatatg 39546244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 482
Target Start/End: Complemental strand, 8435358 - 8435292
Alignment:
Q  416 gtgccctaggcagttgagttga-tttagtaacataaactgattaaaaacaataaagaattggttttta 482  Q
    |||||||||||||||||||||| ||| |||||||||||  | ||||||||||||| | ||||||||||    
T  8435358 gtgccctaggcagttgagttgatttttgtaacataaacataataaaaacaataaa-agttggttttta 8435292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 324 - 431
Target Start/End: Complemental strand, 49716704 - 49716595
Alignment:
Q  324 atcgaagtaataa-aaagttcgttttcacgaggactgtatttaacttctacttagcaatttcattattaaaaaggatgta-taaatttatattgg-tgcc 420  Q
    ||||||||||||| ||||||||| | ||||||||| ||  |||| ||||||||||||| ||| |||  | |||||||||| ||||||| ||| || ||||    
T  49716704 atcgaagtaataataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaaggatgtagtaaattt-tatgggttgcc 49716606  T
Q  421 ctaggcagttg 431  Q
    |||||||||||    
T  49716605 ctaggcagttg 49716595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0363 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 292 - 537
Target Start/End: Original strand, 10 - 251
Alignment:
Q  292 ttgataaatatttggcaagtgaatcaaattcgatcgaagtaataaaaagttcgttttcacgaggactgtatttaacttctacttagcaatttcattatta 391  Q
    |||||| || ||||||||||||| ||||  | ||||||||| |||| | ||||||  ||||||||| ||  |||||| | ||||||||||||| |||| |    
T  10 ttgatagatttttggcaagtgaaccaaag-ctatcgaagtagtaaataattcgttc-cacgaggaccgttgttaactacaacttagcaatttctttatca 107  T
Q  392 aaaaggatgtataaatttatattggtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaatt- 490  Q
    |||||||| | | || ||  || | |||||||||||||||||||| |||  ||||||||||  ||||||||||||||| | |||||||| ||||| |||     
T  108 aaaaggatatgttaaattcaatggttgccctaggcagttgagttggtttt-taacataaacaaattaaaaacaataaa-agttggtttt-aagaatatta 204  T
Q  491 gagagaagtatggttaagtccttcgaatcctctaaagttctcctatg 537  Q
    |||||||||||||||||| | |||||||||||  || ||||||||||    
T  205 gagagaagtatggttaagacattcgaatcctccgaatttctcctatg 251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0567 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0567
Description:

Target: scaffold0567; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 483 - 537
Target Start/End: Original strand, 5999 - 6054
Alignment:
Q  483 agaaaatt-gagagaagtatggttaagtccttcgaatcctctaaagttctcctatg 537  Q
    |||||||| |||||||||||||||||| |||||||||||||  | |||||||||||    
T  5999 agaaaattagagagaagtatggttaagaccttcgaatcctccgaggttctcctatg 6054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 469
Target Start/End: Original strand, 2649 - 2795
Alignment:
Q  324 atcgaagtaataaa-aagttcgttttcacgaggactgtatttaacttctacttagcaatttcattattaaaaaggatgtataaatttatattggtgccct 422  Q
    |||||||||||||| ||| |||| | ||||||||| ||  |||||||||||| ||||||||| ||| | |||||||||||| || ||  |||| |||||     
T  2649 atcgaagtaataaataagatcgtatccacgaggaccgttgttaacttctactcagcaatttcgtta-tcaaaaggatgtattaaattcaattgttgccca 2747  T
Q  423 aggcagtt-gagttgatttagtaacataaactgattaaaaacaataaa 469  Q
    ||| |||| || | | ||| ||||||| ||| |||||||||| |||||    
T  2748 aggaagttggattggtttttgtaacatgaacggattaaaaactataaa 2795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 490 - 523
Target Start/End: Complemental strand, 2742 - 2709
Alignment:
Q  490 tgagagaagtatggttaagtccttcgaatcctct 523  Q
    ||||||||| ||||||||||||||||||||||||    
T  2742 tgagagaagaatggttaagtccttcgaatcctct 2709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 490 - 523
Target Start/End: Original strand, 7189 - 7222
Alignment:
Q  490 tgagagaagtatggttaagtccttcgaatcctct 523  Q
    ||||||||| ||||||||||||||||||||||||    
T  7189 tgagagaagaatggttaagtccttcgaatcctct 7222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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