View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19116_low_1 (Length: 771)

Name: NF19116_low_1
Description: NF19116
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19116_low_1
NF19116_low_1
[»] chr7 (57 HSPs)
chr7 (526-752)||(35314904-35315127)
chr7 (295-470)||(4167446-4167621)
chr7 (314-439)||(35315199-35315324)
chr7 (295-448)||(131967-132120)
chr7 (314-470)||(14109017-14109171)
chr7 (314-470)||(14418974-14419128)
chr7 (289-419)||(10257385-10257513)
chr7 (293-446)||(4857194-4857347)
chr7 (286-419)||(43006371-43006504)
chr7 (314-394)||(4168871-4168951)
chr7 (295-449)||(40930413-40930567)
chr7 (291-417)||(22744737-22744863)
chr7 (314-448)||(25154904-25155038)
chr7 (515-655)||(24494806-24494950)
chr7 (295-448)||(27899182-27899335)
chr7 (289-445)||(13286965-13287121)
chr7 (295-419)||(22061792-22061916)
chr7 (314-452)||(43930333-43930471)
chr7 (295-417)||(46674933-46675055)
chr7 (661-726)||(43114857-43114922)
chr7 (297-381)||(18802424-18802508)
chr7 (409-477)||(24494990-24495058)
chr7 (333-457)||(38406051-38406175)
chr7 (293-381)||(40926554-40926642)
chr7 (318-368)||(10256141-10256191)
chr7 (318-396)||(24873617-24873695)
chr7 (293-359)||(29344157-29344223)
chr7 (294-448)||(46458681-46458835)
chr7 (661-726)||(9392575-9392640)
chr7 (314-391)||(35484335-35484412)
chr7 (291-419)||(22060454-22060582)
chr7 (293-396)||(19278346-19278449)
chr7 (293-396)||(25153651-25153754)
chr7 (296-359)||(29345135-29345198)
chr7 (317-371)||(35483590-35483645)
chr7 (295-386)||(46457065-46457156)
chr7 (314-377)||(47537079-47537142)
chr7 (296-422)||(4858338-4858464)
chr7 (318-356)||(29409298-29409336)
chr7 (314-383)||(7338156-7338225)
chr7 (286-371)||(12631880-12631963)
chr7 (295-448)||(33459511-33459664)
chr7 (292-377)||(37781949-37782034)
chr7 (658-726)||(13599039-13599107)
chr7 (314-386)||(17288250-17288322)
chr7 (333-448)||(26406158-26406273)
chr7 (314-377)||(40881105-40881168)
chr7 (320-419)||(43007646-43007745)
chr7 (318-396)||(22746340-22746418)
chr7 (318-356)||(29408264-29408302)
chr7 (668-726)||(37236078-37236136)
chr7 (295-377)||(47928469-47928551)
chr7 (340-418)||(48754036-48754114)
chr7 (319-412)||(7146799-7146891)
chr7 (314-403)||(7148071-7148160)
chr7 (314-371)||(33071683-33071740)
chr7 (295-396)||(33458305-33458405)
[»] scaffold0098 (3 HSPs)
scaffold0098 (515-709)||(41123-41314)
scaffold0098 (314-481)||(40930-41089)
scaffold0098 (289-419)||(42343-42472)
[»] chr4 (59 HSPs)
chr4 (515-757)||(38418682-38418918)
chr4 (317-481)||(38418952-38419116)
chr4 (289-470)||(47668543-47668724)
chr4 (523-726)||(2293204-2293417)
chr4 (289-419)||(50531753-50531883)
chr4 (292-445)||(44159077-44159230)
chr4 (293-422)||(34439654-34439783)
chr4 (294-443)||(34438400-34438549)
chr4 (295-396)||(38417548-38417649)
chr4 (295-419)||(6138992-6139116)
chr4 (314-477)||(39592228-39592391)
chr4 (295-465)||(86798-86968)
chr4 (318-386)||(41348257-41348325)
chr4 (314-371)||(41349570-41349627)
chr4 (293-474)||(43894098-43894279)
chr4 (317-448)||(17319059-17319190)
chr4 (291-377)||(11482787-11482873)
chr4 (288-394)||(43419397-43419503)
chr4 (314-448)||(50530517-50530651)
chr4 (314-396)||(56000301-56000383)
chr4 (295-371)||(5417299-5417375)
chr4 (295-419)||(44128331-44128455)
chr4 (319-470)||(35787815-35787966)
chr4 (611-757)||(43894433-43894584)
chr4 (295-465)||(6616162-6616332)
chr4 (285-419)||(33377361-33377495)
chr4 (314-446)||(30682997-30683129)
chr4 (293-396)||(52658904-52659007)
chr4 (290-396)||(28103506-28103612)
chr4 (409-477)||(2293464-2293532)
chr4 (295-371)||(43418028-43418104)
chr4 (293-448)||(11114948-11115103)
chr4 (663-726)||(18091866-18091929)
chr4 (314-377)||(26045146-26045209)
chr4 (289-396)||(26393147-26393254)
chr4 (282-396)||(37560319-37560433)
chr4 (526-600)||(43894331-43894405)
chr4 (292-382)||(56001302-56001392)
chr4 (295-396)||(29663638-29663738)
chr4 (400-465)||(29687929-29687994)
chr4 (295-396)||(31711087-31711188)
chr4 (400-477)||(36604780-36604857)
chr4 (290-351)||(44160475-44160536)
chr4 (314-359)||(47242966-47243011)
chr4 (345-417)||(5687220-5687292)
chr4 (294-394)||(29686250-29686350)
chr4 (295-355)||(38371866-38371926)
chr4 (289-377)||(43708825-43708913)
chr4 (318-422)||(44304973-44305077)
chr4 (295-422)||(11113737-11113864)
chr4 (290-397)||(15786942-15787049)
chr4 (318-445)||(17494145-17494272)
chr4 (295-386)||(46796056-46796147)
chr4 (314-377)||(47572600-47572663)
chr4 (293-363)||(96734-96804)
chr4 (295-377)||(50496990-50497072)
chr4 (314-396)||(55953872-55953954)
chr4 (314-395)||(1273454-1273534)
chr4 (314-359)||(47573701-47573746)
[»] chr1 (66 HSPs)
chr1 (530-757)||(14764459-14764679)
chr1 (314-481)||(14764243-14764410)
chr1 (291-470)||(49141442-49141621)
chr1 (290-386)||(40110682-40110778)
chr1 (526-726)||(51218651-51218855)
chr1 (297-422)||(40811192-40811317)
chr1 (290-386)||(26801933-26802029)
chr1 (289-448)||(14169608-14169767)
chr1 (295-422)||(36511325-36511452)
chr1 (285-422)||(22167764-22167901)
chr1 (314-443)||(36509825-36509954)
chr1 (292-465)||(44977213-44977386)
chr1 (289-470)||(51726790-51726971)
chr1 (318-470)||(9633793-9633945)
chr1 (314-386)||(24516348-24516420)
chr1 (314-386)||(40109375-40109447)
chr1 (290-462)||(52742930-52743102)
chr1 (295-470)||(8092593-8092768)
chr1 (314-371)||(26803261-26803318)
chr1 (295-419)||(25785963-25786087)
chr1 (314-462)||(26056101-26056249)
chr1 (409-477)||(51218905-51218973)
chr1 (318-381)||(14765129-14765192)
chr1 (289-422)||(40812605-40812736)
chr1 (314-386)||(24517644-24517716)
chr1 (314-448)||(2972976-2973110)
chr1 (319-421)||(19464619-19464721)
chr1 (314-380)||(38283775-38283841)
chr1 (314-443)||(19466178-19466307)
chr1 (523-576)||(26055987-26056040)
chr1 (283-396)||(47411468-47411581)
chr1 (314-422)||(13641271-13641379)
chr1 (314-462)||(50678380-50678525)
chr1 (526-576)||(37624410-37624460)
chr1 (298-355)||(22169280-22169337)
chr1 (314-418)||(3979311-3979415)
chr1 (295-419)||(25787161-25787285)
chr1 (295-359)||(43808578-43808642)
chr1 (414-465)||(22766771-22766822)
chr1 (414-465)||(23082077-23082128)
chr1 (296-371)||(38280846-38280921)
chr1 (295-422)||(47560134-47560261)
chr1 (663-726)||(52759649-52759712)
chr1 (314-396)||(13930695-13930777)
chr1 (297-359)||(21246532-21246594)
chr1 (526-576)||(27689513-27689563)
chr1 (526-576)||(30551429-30551479)
chr1 (293-359)||(38451545-38451611)
chr1 (295-377)||(44979430-44979512)
chr1 (289-470)||(21276983-21277164)
chr1 (400-465)||(27689383-27689448)
chr1 (297-397)||(13929292-13929392)
chr1 (666-726)||(17244467-17244527)
chr1 (314-386)||(50679851-50679923)
chr1 (293-376)||(48934234-48934317)
chr1 (537-576)||(50678599-50678638)
chr1 (314-381)||(51725357-51725424)
chr1 (318-417)||(52181304-52181403)
chr1 (663-725)||(7111254-7111316)
chr1 (400-462)||(30551543-30551605)
chr1 (295-377)||(30743082-30743164)
chr1 (318-368)||(45042627-45042677)
chr1 (295-396)||(14071223-14071324)
chr1 (314-371)||(34653449-34653506)
chr1 (400-457)||(37624529-37624586)
chr1 (290-419)||(47136684-47136813)
[»] chr2 (46 HSPs)
chr2 (559-756)||(3532446-3532637)
chr2 (314-481)||(3532208-3532375)
chr2 (314-470)||(7983641-7983797)
chr2 (290-462)||(23177663-23177836)
chr2 (290-462)||(23588920-23589093)
chr2 (318-411)||(14510514-14510607)
chr2 (334-462)||(12852920-12853048)
chr2 (292-371)||(7982304-7982383)
chr2 (295-470)||(25570816-25570991)
chr2 (314-470)||(29424558-29424714)
chr2 (295-470)||(14509204-14509379)
chr2 (318-396)||(3533646-3533724)
chr2 (316-465)||(10367255-10367404)
chr2 (400-477)||(14714592-14714669)
chr2 (523-600)||(14714715-14714792)
chr2 (318-403)||(25569787-25569872)
chr2 (314-447)||(32614399-32614532)
chr2 (542-726)||(14714902-14715095)
chr2 (289-376)||(15850101-15850188)
chr2 (314-465)||(37868991-37869142)
chr2 (415-477)||(4512221-4512283)
chr2 (523-576)||(23177897-23177950)
chr2 (523-576)||(23589154-23589207)
chr2 (409-477)||(26205122-26205190)
chr2 (295-470)||(4829460-4829635)
chr2 (295-445)||(7036961-7037111)
chr2 (523-610)||(4512329-4512413)
chr2 (523-576)||(6708819-6708872)
chr2 (292-376)||(37867748-37867832)
chr2 (314-377)||(33553404-33553467)
chr2 (297-376)||(41795992-41796071)
chr2 (316-446)||(7490165-7490295)
chr2 (319-396)||(2581822-2581899)
chr2 (316-465)||(12959656-12959805)
chr2 (531-576)||(41296294-41296339)
chr2 (289-377)||(42596549-42596637)
chr2 (405-465)||(45047447-45047507)
chr2 (314-377)||(20630710-20630773)
chr2 (400-463)||(21010451-21010514)
chr2 (295-381)||(7038367-7038453)
chr2 (293-355)||(8538686-8538748)
chr2 (314-376)||(35801085-35801147)
chr2 (531-573)||(45047625-45047667)
chr2 (527-576)||(12853113-12853162)
chr2 (293-386)||(12854134-12854227)
chr2 (314-371)||(15850704-15850761)
[»] chr8 (74 HSPs)
chr8 (314-470)||(41522634-41522790)
chr8 (526-754)||(39325493-39325723)
chr8 (296-462)||(37276197-37276363)
chr8 (523-735)||(44102965-44103187)
chr8 (314-470)||(2421239-2421395)
chr8 (290-465)||(39546628-39546803)
chr8 (316-470)||(13366996-13367150)
chr8 (292-386)||(22621164-22621258)
chr8 (295-477)||(36756059-36756241)
chr8 (292-481)||(117040-117229)
chr8 (314-448)||(8095360-8095494)
chr8 (286-371)||(41521303-41521388)
chr8 (314-386)||(22619909-22619981)
chr8 (333-456)||(7486110-7486233)
chr8 (400-481)||(39325769-39325850)
chr8 (314-470)||(19913506-19913662)
chr8 (289-477)||(44103235-44103423)
chr8 (295-377)||(16346094-16346176)
chr8 (295-417)||(31623901-31624023)
chr8 (295-448)||(35943902-35944056)
chr8 (400-477)||(21670164-21670241)
chr8 (400-481)||(21961923-21962004)
chr8 (317-445)||(39220696-39220824)
chr8 (314-419)||(41866908-41867013)
chr8 (279-355)||(2419853-2419929)
chr8 (314-386)||(34616143-34616215)
chr8 (314-422)||(34617189-34617297)
chr8 (378-462)||(36938759-36938843)
chr8 (292-396)||(38591027-38591131)
chr8 (295-403)||(43275745-43275853)
chr8 (287-377)||(4534021-4534111)
chr8 (314-396)||(24069466-24069548)
chr8 (293-419)||(41867913-41868039)
chr8 (295-396)||(29738286-29738387)
chr8 (317-448)||(20308622-20308753)
chr8 (317-448)||(21095255-21095386)
chr8 (287-354)||(35462654-35462721)
chr8 (296-422)||(36940027-36940153)
chr8 (314-396)||(45194497-45194579)
chr8 (314-376)||(45195844-45195906)
chr8 (293-470)||(10052097-10052274)
chr8 (314-359)||(22914247-22914292)
chr8 (292-377)||(35463028-35463113)
chr8 (285-470)||(36070163-36070348)
chr8 (295-420)||(36071374-36071499)
chr8 (295-371)||(22913187-22913263)
chr8 (295-394)||(10053766-10053865)
chr8 (314-360)||(8096601-8096647)
chr8 (526-576)||(10052330-10052380)
chr8 (523-573)||(13513643-13513693)
chr8 (523-573)||(13603176-13603226)
chr8 (297-359)||(23768542-23768604)
chr8 (542-576)||(37276066-37276100)
chr8 (316-377)||(9190481-9190542)
chr8 (314-359)||(12818768-12818813)
chr8 (293-377)||(37474075-37474159)
chr8 (289-377)||(9189383-9189471)
chr8 (314-398)||(14820207-14820291)
chr8 (314-386)||(24068344-24068416)
chr8 (525-576)||(36756289-36756341)
chr8 (542-597)||(21962065-21962120)
chr8 (314-409)||(43277928-43278023)
chr8 (518-569)||(45541697-45541748)
chr8 (316-394)||(7770919-7770997)
chr8 (526-576)||(13363418-13363468)
chr8 (400-462)||(13363532-13363594)
chr8 (409-471)||(21267241-21267303)
chr8 (316-422)||(38789066-38789172)
chr8 (526-576)||(39546517-39546567)
chr8 (400-477)||(13513520-13513597)
chr8 (400-477)||(13603053-13603130)
chr8 (316-417)||(31625383-31625484)
chr8 (295-396)||(38589816-38589916)
chr8 (333-470)||(44606172-44606309)
[»] chr5 (47 HSPs)
chr5 (292-448)||(12830906-12831062)
chr5 (292-448)||(12862886-12863042)
chr5 (314-386)||(8188230-8188302)
chr5 (314-470)||(7426655-7426811)
chr5 (293-419)||(32735476-32735602)
chr5 (314-443)||(42510128-42510257)
chr5 (315-396)||(22819569-22819650)
chr5 (314-422)||(15857612-15857720)
chr5 (318-446)||(32734150-32734277)
chr5 (354-470)||(2167461-2167576)
chr5 (282-377)||(11907200-11907295)
chr5 (317-448)||(40058035-40058166)
chr5 (295-396)||(12936122-12936223)
chr5 (314-462)||(21387651-21387799)
chr5 (295-417)||(1663182-1663304)
chr5 (314-371)||(42511711-42511768)
chr5 (314-462)||(18693712-18693860)
chr5 (314-386)||(30253600-30253672)
chr5 (295-389)||(12950287-12950381)
chr5 (295-456)||(7345350-7345511)
chr5 (314-375)||(8187180-8187240)
chr5 (314-355)||(12829584-12829625)
chr5 (295-396)||(18677971-18678072)
chr5 (295-448)||(19525256-19525409)
chr5 (523-576)||(21387860-21387913)
chr5 (314-386)||(224620-224692)
chr5 (295-347)||(7427993-7428045)
chr5 (287-371)||(24761766-24761849)
chr5 (314-422)||(40059322-40059430)
chr5 (297-396)||(12933748-12933847)
chr5 (297-396)||(12947909-12948008)
chr5 (295-374)||(23679142-23679221)
chr5 (295-374)||(23855591-23855670)
chr5 (293-371)||(39135693-39135771)
chr5 (314-355)||(12861563-12861604)
chr5 (290-371)||(19523973-19524054)
chr5 (314-421)||(15510258-15510365)
chr5 (314-377)||(24070419-24070482)
chr5 (314-377)||(24071482-24071545)
chr5 (294-396)||(19827160-19827262)
chr5 (295-417)||(26403302-26403424)
chr5 (314-356)||(29906130-29906172)
chr5 (289-359)||(30916175-30916245)
chr5 (110-156)||(38617662-38617708)
chr5 (314-383)||(21006154-21006223)
chr5 (314-355)||(22818174-22818215)
chr5 (314-359)||(39134681-39134726)
[»] scaffold1974 (2 HSPs)
scaffold1974 (295-462)||(582-749)
scaffold1974 (522-576)||(468-522)
[»] scaffold1878 (2 HSPs)
scaffold1878 (295-462)||(525-692)
scaffold1878 (522-576)||(752-806)
[»] scaffold0290 (1 HSPs)
scaffold0290 (295-462)||(9432-9599)
[»] chr3 (59 HSPs)
chr3 (294-481)||(17350037-17350224)
chr3 (297-477)||(12062323-12062503)
chr3 (317-481)||(39133034-39133198)
chr3 (314-396)||(21127939-21128021)
chr3 (523-757)||(17349746-17349995)
chr3 (290-470)||(53808308-53808488)
chr3 (283-465)||(8371203-8371385)
chr3 (295-477)||(25583109-25583290)
chr3 (316-397)||(43346466-43346547)
chr3 (334-462)||(11219464-11219592)
chr3 (314-470)||(23559833-23559989)
chr3 (526-751)||(39133243-39133483)
chr3 (289-396)||(23561145-23561252)
chr3 (317-396)||(48866158-48866237)
chr3 (392-470)||(47765530-47765608)
chr3 (314-448)||(48867398-48867532)
chr3 (289-417)||(10987652-10987780)
chr3 (316-448)||(35174350-35174482)
chr3 (400-477)||(7483464-7483541)
chr3 (333-465)||(19622038-19622170)
chr3 (318-422)||(32980446-32980550)
chr3 (295-419)||(35173142-35173266)
chr3 (295-419)||(42633883-42634007)
chr3 (619-713)||(24753269-24753368)
chr3 (682-757)||(31638480-31638555)
chr3 (525-576)||(53808543-53808594)
chr3 (294-368)||(7921691-7921765)
chr3 (523-576)||(11219653-11219706)
chr3 (289-418)||(54653964-54654093)
chr3 (664-726)||(21728185-21728247)
chr3 (314-371)||(12060672-12060729)
chr3 (294-419)||(42632700-42632825)
chr3 (416-481)||(31638234-31638301)
chr3 (314-386)||(43345333-43345405)
chr3 (314-377)||(33000839-33000902)
chr3 (316-363)||(38639034-38639081)
chr3 (314-377)||(39531855-39531918)
chr3 (663-726)||(47430958-47431021)
chr3 (295-422)||(49334331-49334458)
chr3 (314-377)||(50150735-50150798)
chr3 (400-462)||(34902948-34903010)
chr3 (295-381)||(51400210-51400296)
chr3 (314-396)||(51401371-51401453)
chr3 (314-371)||(1031830-1031887)
chr3 (316-377)||(4067942-4068003)
chr3 (314-359)||(39530809-39530854)
chr3 (314-359)||(45730651-45730696)
chr3 (314-419)||(51825618-51825723)
chr3 (295-396)||(54752611-54752712)
chr3 (315-359)||(32999812-32999856)
chr3 (314-422)||(48252947-48253055)
chr3 (283-359)||(48336330-48336406)
chr3 (663-725)||(28776725-28776787)
chr3 (295-417)||(41386125-41386247)
chr3 (289-371)||(47808151-47808233)
chr3 (664-726)||(50879972-50880034)
chr3 (314-359)||(7583973-7584018)
chr3 (661-726)||(37610542-37610607)
chr3 (285-394)||(48035346-48035455)
[»] chr6 (32 HSPs)
chr6 (296-470)||(18139433-18139607)
chr6 (314-470)||(14328720-14328876)
chr6 (314-470)||(14421730-14421886)
chr6 (314-386)||(13800045-13800117)
chr6 (295-470)||(31738358-31738533)
chr6 (403-465)||(13507122-13507184)
chr6 (523-576)||(34084074-34084127)
chr6 (289-419)||(8412313-8412443)
chr6 (288-386)||(14326141-14326239)
chr6 (288-386)||(14419151-14419249)
chr6 (318-396)||(31740292-31740370)
chr6 (290-375)||(1692064-1692149)
chr6 (296-477)||(33801956-33802137)
chr6 (293-377)||(1757533-1757617)
chr6 (317-365)||(16269819-16269867)
chr6 (314-422)||(22299897-22300005)
chr6 (290-356)||(5693647-5693713)
chr6 (295-396)||(5311274-5311375)
chr6 (296-445)||(27440146-27440295)
chr6 (297-417)||(8411083-8411203)
chr6 (295-359)||(27108231-27108295)
chr6 (295-359)||(27150028-27150092)
chr6 (318-359)||(1693038-1693079)
chr6 (314-381)||(9927620-9927687)
chr6 (317-360)||(16251632-16251675)
chr6 (314-377)||(27107195-27107258)
chr6 (314-377)||(27149001-27149064)
chr6 (295-377)||(11724335-11724417)
chr6 (663-725)||(11801121-11801183)
chr6 (289-422)||(27438779-27438912)
chr6 (296-381)||(33129277-33129362)
chr6 (314-371)||(33807703-33807760)
[»] scaffold0025 (1 HSPs)
scaffold0025 (314-465)||(56651-56802)
[»] scaffold0084 (3 HSPs)
scaffold0084 (611-757)||(12841-12992)
scaffold0084 (314-481)||(13139-13306)
scaffold0084 (526-600)||(13020-13094)
[»] scaffold0122 (2 HSPs)
scaffold0122 (295-470)||(15945-16115)
scaffold0122 (318-413)||(17163-17258)
[»] scaffold0046 (2 HSPs)
scaffold0046 (611-757)||(23755-23906)
scaffold0046 (544-597)||(23674-23727)
[»] scaffold0015 (2 HSPs)
scaffold0015 (400-481)||(207733-207814)
scaffold0015 (542-597)||(207617-207672)
[»] scaffold0045 (1 HSPs)
scaffold0045 (300-465)||(77130-77297)
[»] scaffold0051 (2 HSPs)
scaffold0051 (527-576)||(39741-39790)
scaffold0051 (400-462)||(39855-39917)
[»] scaffold0003 (2 HSPs)
scaffold0003 (296-445)||(47066-47215)
scaffold0003 (289-422)||(48450-48583)
[»] scaffold0166 (1 HSPs)
scaffold0166 (287-371)||(4263-4346)
[»] scaffold0009 (1 HSPs)
scaffold0009 (294-377)||(205591-205674)
[»] scaffold0096 (1 HSPs)
scaffold0096 (314-354)||(5067-5107)
[»] scaffold0041 (1 HSPs)
scaffold0041 (314-377)||(85115-85178)
[»] scaffold2127 (1 HSPs)
scaffold2127 (290-419)||(512-641)


Alignment Details
Target: chr7 (Bit Score: 177; Significance: 5e-95; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 177; E-Value: 5e-95
Query Start/End: Original strand, 526 - 752
Target Start/End: Complemental strand, 35315127 - 35314904
Alignment:
Q  526 gttgaatcatgtaggatctattgtactttactgtgaaccactaacacctaagttaatccattcatattcttcttcttccctcgtcatcttgaacaacaac 625  Q
    ||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||   |||||||||||||| |||||||||||||||||    
T  35315127 gttgaatcatgtagggtcttttgtactttactgtgaactactaacacctaagttaatccattcat---cttcttcttccctcatcatcttgaacaacaac 35315031  T
Q  626 ttcatcaataaaatctagaaaatcccaaaactaataattaaacctactatttaatcaccacacaaccatcattatcatcgtcatctataatcattaacac 725  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||    
T  35315030 ttcatcaataaaatctagaaaatcccaaaaataataattaaacctactatttaatcaccacacaaccatcattgtcatcttcatctataatcatcaacac 35314931  T
Q  726 cattcttcttaaatattattcttcatc 752  Q
    |||||||| ||||||||||||||||||    
T  35314930 cattcttcctaaatattattcttcatc 35314904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 295 - 470
Target Start/End: Original strand, 4167446 - 4167621
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 394  Q
    ||||||||||||| | |  ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||  ||||||||||||| || ||||    
T  4167446 ggcttaatacatcctccgatcccttaacttattttattttctcagtttaatcccttaactattaagtgtgtcaatttgatcctataagtcttctgtcgtt 4167545  T
Q  395 tattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcata 470  Q
    || |||||||||||| ||||| | |||| |||||||||| ||||||||||||||| ||||||| ||||||| ||||    
T  4167546 tactgttttagtcatttctgtcaatttttaacatcaaatttctaaggtgaaccatgtttaaaggtggtccaccata 4167621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 314 - 439
Target Start/End: Complemental strand, 35315324 - 35315199
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 413  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||| |||| ||||||||| || |||||| |||||||||| |||||    
T  35315324 tcccttaacttattttattttctcagtttgatcccttaattattaagtatgtcaatttggtcccataagtcttctgtcgtttactgttttagtcctctct 35315225  T
Q  414 gttagttttgaacatcaaatatctaa 439  Q
    ||||||||| |||||||||| |||||    
T  35315224 gttagtttttaacatcaaatgtctaa 35315199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 295 - 448
Target Start/End: Complemental strand, 132120 - 131967
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 394  Q
    ||||||||||||| ||   ||||||||||||||||||||| |||||||| |||||||||||||||||||||| |||| |||| |||||||||   |||||    
T  132120 ggcttaatacatccttaggtcccttaacttattttattttctcagtttggtcccttaactattaagtgtgtcgatttggtcccataagtcttcctccgtt 132021  T
Q  395 tattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaacca 448  Q
    || |  | |  ||||||| ||||||||| ||| | |||| ||||||||||||||    
T  132020 tactaatgtgatcatctccgttagtttttaaccttaaatgtctaaggtgaacca 131967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 314 - 470
Target Start/End: Complemental strand, 14109171 - 14109017
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 413  Q
    ||||||||||||||||   |||||| |||| |||||||||||| || ||| ||||  | |||| ||  ||||| |||||||||  ||||||||| ||||     
T  14109171 tcccttaacttatttttaattttcactttggtcccttaactataaaatgtctcaaactggtcccat--gtcttttgccgtttaccgttttagtcctctcc 14109074  T
Q  414 gttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcata 470  Q
    ||||||||| |||||||||| ||||||||||||||| ||||||| ||||||| ||||    
T  14109073 gttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccata 14109017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 314 - 470
Target Start/End: Complemental strand, 14419128 - 14418974
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 413  Q
    ||||||||||||||||   |||||| |||| |||||||||||| || ||| ||||  | |||| ||  ||||| |||||||||  ||||||||| ||||     
T  14419128 tcccttaacttatttttaattttcactttggtcccttaactataaaatgtctcaaactggtcccat--gtcttttgccgtttaccgttttagtcctctcc 14419031  T
Q  414 gttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcata 470  Q
    ||||||||| |||||||||| ||||||||||||||| ||||||| ||||||| ||||    
T  14419030 gttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccata 14418974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 289 - 419
Target Start/End: Complemental strand, 10257513 - 10257385
Alignment:
Q  289 ttttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttat 388  Q
    ||||| |||||||||||||   |  ||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||| |||| |||| |||  |    
T  10257513 tttttaggcttaatacatcccactgtcccttaacttattttattttctcaatttgatcccttaactattaagtgtctcaatttggtcccataactct--t 10257416  T
Q  389 gccgtttattgttttagtcatctctgttagt 419  Q
    | |||||| | |||||||||| |||||||||    
T  10257415 gtcgtttactattttagtcatttctgttagt 10257385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 293 - 446
Target Start/End: Original strand, 4857194 - 4857347
Alignment:
Q  293 ttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccg 392  Q
    ||||| ||||||||| ||   ||||||||||||||||   |||||| |||| |||| ||||||| || ||| || |||| |||| | || |||| |||||    
T  4857194 ttggcctaatacatcatttgatcccttaacttatttttggttttcactttggtcccctaactataaaatgtctcgatttggtcccacaaatcttctgccg 4857293  T
Q  393 tttattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaac 446  Q
    |||| |||||||||| |||| ||||||||| |||||||||| ||||||||||||    
T  4857294 tttactgttttagtcctctccgttagtttttaacatcaaatgtctaaggtgaac 4857347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 286 - 419
Target Start/End: Original strand, 43006371 - 43006504
Alignment:
Q  286 taattttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtct 385  Q
    |||||||| ||||||||||||| ||   ||||||||||||||||   |||||| |||| |||| |||||||||||||| ||||||| ||||  |||||||    
T  43006371 taatttttaggcttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactattaagtgtctcaatttggtcccctaagtct 43006470  T
Q  386 tatgccgtttattgttttagtcatctctgttagt 419  Q
    ||||||||||  | |||| |||||||| ||||||    
T  43006471 tatgccgtttgctattttggtcatctccgttagt 43006504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 314 - 394
Target Start/End: Complemental strand, 4168951 - 4168871
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 394  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||  | ||||||| |||||||    
T  4168951 tcccttaacttattttattttctcagtttgatcccttaactataaagtgtgtcaatttggtctcacaagtcttttgccgtt 4168871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 295 - 449
Target Start/End: Original strand, 40930413 - 40930567
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 394  Q
    ||||||||||||| ||   |||||| | |||||||   |||||| |||| |||| ||||||| |||||| ||||||| |||| |||| |||| ||  |||    
T  40930413 ggcttaatacatcgtttgatcccttgatttatttttggttttcactttggtcccctaactataaagtgtttcaatttggtcccataaatcttttgatgtt 40930512  T
Q  395 tattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccat 449  Q
    ||  ||||||||| ||||| |||||||| |||||||||||||||||||| |||||    
T  40930513 taccgttttagtcctctctattagtttttaacatcaaatatctaaggtggaccat 40930567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 291 - 417
Target Start/End: Original strand, 22744737 - 22744863
Alignment:
Q  291 ttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgc 390  Q
    ||||||||||||||||| ||   ||||||||||||||||   |||||| |||  |||| ||||||| |||||| ||||||| ||||||||| ||||||||    
T  22744737 ttttggcttaatacatcatttggtcccttaacttatttttgattttcaatttagtcccctaactataaagtgtttcaatttggtcctataaatcttatgc 22744836  T
Q  391 cgtttattgttttagtcatctctgtta 417  Q
    |||||| | |||| ||| |||| ||||    
T  22744837 cgtttactattttggtcttctccgtta 22744863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 314 - 448
Target Start/End: Complemental strand, 25155038 - 25154904
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 413  Q
    ||||||||||||||||   |||||| ||||||||||||||||| |||||| |||||||| ||  |||| |||| | | ||||||  |||| ||||||||     
T  25155038 tcccttaacttatttttggttttcaatttgatcccttaactataaagtgtctcaatttaatctcataaatcttcttctgtttatcattttggtcatctcc 25154939  T
Q  414 gttagttttgaacatcaaatatctaaggtgaacca 448  Q
    ||| ||||| ||| | |||| ||||||||||||||    
T  25154938 gtttgtttttaaccttaaatgtctaaggtgaacca 25154904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 515 - 655
Target Start/End: Complemental strand, 24494950 - 24494806
Alignment:
Q  515 aaaaaataaccgttgaatcatgtaggatctattgtactttactgtgaaccactaacacctaagttaatccattcatattcttcttc-----ttccctcgt 609  Q
    |||| |||||||||||||||||| |  |||||||||||||||||||||||||| ||||||||   |||  |||||| |||||||||     |  | || |    
T  24494950 aaaagataaccgttgaatcatgtggcgtctattgtactttactgtgaaccactcacacctaataaaattgattcatcttcttcttccctcatctcttcat 24494851  T
Q  610 catcttgaacaacaacttcatcaataaaatctagaaaatcccaaaa 655  Q
     ||||| |||||||||||||||||||||||| | ||||||||||||    
T  24494850 gatcttcaacaacaacttcatcaataaaatcca-aaaatcccaaaa 24494806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 295 - 448
Target Start/End: Complemental strand, 27899335 - 27899182
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 394  Q
    ||||||||||||   ||| ||||||||||||||||||||| | |||||| ||| |||||||| || | | |||||||  ||| |||| |||| || ||||    
T  27899335 ggcttaatacattcctcagtcccttaacttattttattttcttagtttggtcctttaactataaaatatctcaatttgatcccataaatcttttgtcgtt 27899236  T
Q  395 tattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaacca 448  Q
    || | |||| ||| | || ||||||||| ||| | |||||||||||||||||||    
T  27899235 tactattttggtcttatccgttagtttttaaccttaaatatctaaggtgaacca 27899182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 289 - 445
Target Start/End: Complemental strand, 13287121 - 13286965
Alignment:
Q  289 ttttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttat 388  Q
    |||||||||||||||||||   |  |||||||  |||||||| ||| ||  |||||||||||||||||||||||| ||||||| ||||  || |||||||    
T  13287121 ttttttggcttaatacatcccccgatcccttagtttattttaatttctctatttgatcccttaactattaagtgtttcaatttggtcccttatgtcttat 13287022  T
Q  389 gccgtttattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaa 445  Q
    || ||||| | |||| ||| |||  ||||||||| ||| | |||| |||||| ||||    
T  13287021 gctgtttactattttggtcctcttcgttagtttttaaccttaaatgtctaagatgaa 13286965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 295 - 419
Target Start/End: Complemental strand, 22061916 - 22061792
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 394  Q
    ||||||||||||| ||   |||||||||||||||| | |||||| |||| |||| ||||||| ||  || ||||||| |||| |||| ||||||||||||    
T  22061916 ggcttaatacatcattttgtcccttaacttattttgtgttttcaatttggtcccctaactataaaacgtctcaatttggtcccataaatcttatgccgtt 22061817  T
Q  395 tattgttttagtcatctctgttagt 419  Q
    || | |||||||| |||| ||||||    
T  22061816 tactattttagtcttctccgttagt 22061792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 314 - 452
Target Start/End: Original strand, 43930333 - 43930471
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 413  Q
    ||||||||||||||||   |||||| |||| |||| ||||||||||  || ||||||| ||||||||| |||| || |||||| | |||| ||| |||||    
T  43930333 tcccttaacttatttttgattttcactttggtcccctaactattaaacgtctcaatttggtcctataaatcttctgtcgtttactattttggtcctctct 43930432  T
Q  414 gttagttttgaacatcaaatatctaaggtgaaccatatt 452  Q
    |||| |||| ||| | |||| ||||||||| || |||||    
T  43930433 gttaatttttaaccttaaatgtctaaggtggactatatt 43930471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 295 - 417
Target Start/End: Complemental strand, 46675055 - 46674933
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 394  Q
    ||||||||||||| ||   ||||||||||||||||   |||||| ||||||||||||||||| |||||| || |||| |||| |||| |||| |||||||    
T  46675055 ggcttaatacatcatttgatcccttaacttatttttggttttcaatttgatcccttaactataaagtgtctcgatttggtcccataaatcttttgccgtt 46674956  T
Q  395 tattgttttagtcatctctgtta 417  Q
    || | |||| ||| |||| ||||    
T  46674955 tactattttggtcctctccgtta 46674933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 661 - 726
Target Start/End: Complemental strand, 43114922 - 43114857
Alignment:
Q  661 aattaaacctactatttaatcaccacacaaccatcattatcatcgtcatctataatcattaacacc 726  Q
    ||||||||||||||||||||||| |||| ||||||||||||||| | |||||| ||||| ||||||    
T  43114922 aattaaacctactatttaatcactacaccaccatcattatcatctttatctatcatcatcaacacc 43114857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 297 - 381
Target Start/End: Complemental strand, 18802508 - 18802424
Alignment:
Q  297 cttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataa 381  Q
    ||||||||||| ||   |||||||||||||||| | |||||| ||||||||| ||||||| |||||| |||||||||||| ||||    
T  18802508 cttaatacatcatttggtcccttaacttattttttgttttcattttgatcccctaactataaagtgtctcaatttagtcccataa 18802424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 409 - 477
Target Start/End: Complemental strand, 24495058 - 24494990
Alignment:
Q  409 tctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcatatgcctta 477  Q
    |||| ||||||||| |||||||||| ||||| ||||||||||||||||  ||||||| |||||||||||    
T  24495058 tctccgttagtttttaacatcaaatgtctaaagtgaaccatatttaaaagtggtccaccatatgcctta 24494990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 333 - 457
Target Start/End: Original strand, 38406051 - 38406175
Alignment:
Q  333 ttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctctgttagttttgaacatcaaa 432  Q
    |||||| |||| |||| ||||||| |||||| ||||  | || | |||| |||| || |||||| |||||| ||| | || |||| |||| |||||||||    
T  38406051 ttttcattttggtcccctaactataaagtgtctcaaactggttccataaatcttctgacgtttactgttttggtcctttccgttaatttttaacatcaaa 38406150  T
Q  433 tatctaaggtgaaccatatttaaag 457  Q
    | |||||||||||||||||||||||    
T  38406151 tgtctaaggtgaaccatatttaaag 38406175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 293 - 381
Target Start/End: Complemental strand, 40926642 - 40926554
Alignment:
Q  293 ttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataa 381  Q
    ||||||||||||||| || | ||||||||||||||||   |||||| |||| |||| ||||||| |||||| ||||||| |||||||||    
T  40926642 ttggcttaatacatcatttagtcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcctataa 40926554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 318 - 368
Target Start/End: Original strand, 10256141 - 10256191
Alignment:
Q  318 ttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaa 368  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||| ||||    
T  10256141 ttaacttattttattttctcagtttggtcccttaactattaagtgtctcaa 10256191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 318 - 396
Target Start/End: Complemental strand, 24873695 - 24873617
Alignment:
Q  318 ttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgttta 396  Q
    |||||||||||| | |||||| |||||| || ||||||| |||||| ||||||| |||| ||||||||| |||||||||    
T  24873695 ttaacttattttttgttttcattttgatgccctaactataaagtgtctcaatttggtcccataagtcttctgccgttta 24873617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 293 - 359
Target Start/End: Original strand, 29344157 - 29344223
Alignment:
Q  293 ttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaa 359  Q
    ||||||||||||||||  |  ||||||||||||||||| ||| ||||||||| ||||||||||||||    
T  29344157 ttggcttaatacatctcccggtcccttaacttattttaatttctcagtttgaccccttaactattaa 29344223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 294 - 448
Target Start/End: Complemental strand, 46458835 - 46458681
Alignment:
Q  294 tggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgt 393  Q
    |||||||||||||| ||   |||||||| | |||||   |||||| |||| |||||||||||| |||||| ||||||| |||| |||| |||| | ||||    
T  46458835 tggcttaatacatcgtttggtcccttaagtaatttttgattttcaatttggtcccttaactataaagtgtctcaatttggtcccataaatcttcttccgt 46458736  T
Q  394 ttattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaacca 448  Q
    |||   |||| ||| |||| ||| ||||| ||| | |||| ||||||||||||||    
T  46458735 ttaccattttggtcctctccgtttgtttttaaccttaaatgtctaaggtgaacca 46458681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 661 - 726
Target Start/End: Complemental strand, 9392640 - 9392575
Alignment:
Q  661 aattaaacctactatttaatcaccacacaaccatcattatcatcgtcatctataatcattaacacc 726  Q
    ||||||||||||||||||||||| |||| | ||||||| ||||| |||||||| ||||| ||||||    
T  9392640 aattaaacctactatttaatcactacaccatcatcattgtcatcttcatctatcatcatcaacacc 9392575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 314 - 391
Target Start/End: Complemental strand, 35484412 - 35484335
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgcc 391  Q
    ||||||||||||||||||||  |||||||| ||| |||||||| |||| | |||||||||||| |||| |||| ||||    
T  35484412 tcccttaacttattttatttcctcagtttggtcctttaactataaagtatttcaatttagtcccataactcttctgcc 35484335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 291 - 419
Target Start/End: Original strand, 22060454 - 22060582
Alignment:
Q  291 ttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgc 390  Q
    ||||||||||||| ||| ||   || ||||||||||||| | |||| | |||| |||  ||||||| |||||| ||||||| || | | |||||||||||    
T  22060454 ttttggcttaatatatcatttggtcacttaacttattttgtgtttttaatttggtcctctaactataaagtgtctcaatttggttccacaagtcttatgc 22060553  T
Q  391 cgtttattgttttagtcatctctgttagt 419  Q
    |||||| | |||| |||||||| ||||||    
T  22060554 cgtttactattttggtcatctccgttagt 22060582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 293 - 396
Target Start/End: Original strand, 19278346 - 19278449
Alignment:
Q  293 ttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccg 392  Q
    ||||||||||||||| ||   ||||||||||||||||    ||||| |||| |||||||| ||| |||||| ||||||| |||| |||| |||| |||||    
T  19278346 ttggcttaatacatcatttggtcccttaacttatttttggatttcattttggtcccttaattataaagtgtctcaatttggtcccataattcttctgccg 19278445  T
Q  393 ttta 396  Q
    ||||    
T  19278446 ttta 19278449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 293 - 396
Target Start/End: Original strand, 25153651 - 25153754
Alignment:
Q  293 ttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccg 392  Q
    ||||||||||||||| ||   ||||||||||||||||   |||||| |||| |||| ||||||| |||||| ||||||| |||| |||| |||| | |||    
T  25153651 ttggcttaatacatcatttggtcccttaacttattttcgattttcaatttggtcccctaactataaagtgtctcaatttggtcccataaatcttcttccg 25153750  T
Q  393 ttta 396  Q
    ||||    
T  25153751 ttta 25153754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 296 - 359
Target Start/End: Complemental strand, 29345198 - 29345135
Alignment:
Q  296 gcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaa 359  Q
    ||||||||||||  ||  ||| |||| |||||||| ||||||||||||||||||||||||||||    
T  29345198 gcttaatacatcactcgatcctttaatttattttaatttttcagtttgatcccttaactattaa 29345135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 317 - 371
Target Start/End: Original strand, 35483590 - 35483645
Alignment:
Q  317 cttaacttattttatttt-ttcagtttgatcccttaactattaagtgtgtcaattt 371  Q
    |||||||||||||||||| ||||||||| |||||||||||| |||||| |||||||    
T  35483590 cttaacttattttatttttttcagtttggtcccttaactataaagtgtttcaattt 35483645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 295 - 386
Target Start/End: Original strand, 46457065 - 46457156
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtctt 386  Q
    ||||||||||||| ||   | ||||||||||||||   |||||| ||||||||||||||||| |||||| ||||||| |||| |||| ||||    
T  46457065 ggcttaatacatcgtttggttccttaacttatttttggttttcaatttgatcccttaactataaagtgtctcaatttggtcccataaatctt 46457156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 314 - 377
Target Start/End: Complemental strand, 47537142 - 47537079
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcct 377  Q
    |||||||||||||||||  || |||||||| ||||||||||||||| ||| ||||||| |||||    
T  47537142 tcccttaacttattttaacttctcagtttggtcccttaactattaaatgtttcaatttggtcct 47537079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 296 - 422
Target Start/End: Complemental strand, 4858464 - 4858338
Alignment:
Q  296 gcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgttt 395  Q
    |||||||||||| ||   ||||||||||||||||   |||||| ||||||||| ||||||| || ||| ||||||| |||| |||| |||| ||  ||||    
T  4858464 gcttaatacatcatttggtcccttaacttatttttagttttcactttgatcccctaactataaaatgtctcaatttggtcccataaatcttctgttgttt 4858365  T
Q  396 attgttttagtcatctctgttagtttt 422  Q
    | | ||||| || ||||| ||||||||    
T  4858364 actattttaatcctctctattagtttt 4858338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 318 - 356
Target Start/End: Complemental strand, 29409336 - 29409298
Alignment:
Q  318 ttaacttattttattttttcagtttgatcccttaactat 356  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  29409336 ttaacttattttattttctcagtttgatcccttaactat 29409298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 314 - 383
Target Start/End: Original strand, 7338156 - 7338225
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagt 383  Q
    |||||||||||||||| | || ||| ||  |||||||||| ||||| ||||||||||||||||| |||||    
T  7338156 tcccttaacttattttttcttctcacttcaatcccttaacaattaaatgtgtcaatttagtcctgtaagt 7338225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 286 - 371
Target Start/End: Complemental strand, 12631963 - 12631880
Alignment:
Q  286 taattttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaattt 371  Q
    |||||||||||||||||||||||     ||||||||||||||||| |||||||||| | | |||||||||| |||||| |||||||    
T  12631963 taattttttggcttaatacatctccaggtcccttaacttatttta-tttttcagttgggt-ccttaactataaagtgtctcaattt 12631880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 295 - 448
Target Start/End: Complemental strand, 33459664 - 33459511
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 394  Q
    ||||||||||||| || | |||| |||||||||||   |||||| |||| |||  ||||||| |||||| ||||||| |||| |||||||||   |||||    
T  33459664 ggcttaatacatcatttagtcccataacttatttttggttttcattttggtcctctaactataaagtgtctcaatttggtcccataagtcttcctccgtt 33459565  T
Q  395 tattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaacca 448  Q
    || |  | | ||| | |||||||||||| ||| | || | ||||||||||||||    
T  33459564 tactaatgtggtcttttctgttagtttttaaccttaactgtctaaggtgaacca 33459511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 292 - 377
Target Start/End: Original strand, 37781949 - 37782034
Alignment:
Q  292 tttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcct 377  Q
    ||||||||||||||||  ||  |||||||| |||||||| ||| |||||||| | | ||||||||||| ||| ||||||| |||||    
T  37781949 tttggcttaatacatccctcggtcccttaaattattttaatttctcagtttggttctttaactattaaatgtttcaatttggtcct 37782034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 658 - 726
Target Start/End: Complemental strand, 13599107 - 13599039
Alignment:
Q  658 aataattaaacctactatttaatcaccacacaaccatcattatcatcgtcatctataatcattaacacc 726  Q
    |||| |||||||||||||||||| || |||| ||||||||| ||| | |||||||| ||||| ||||||    
T  13599107 aatatttaaacctactatttaattactacaccaccatcattgtcaacttcatctatcatcatcaacacc 13599039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 314 - 386
Target Start/End: Complemental strand, 17288322 - 17288250
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtctt 386  Q
    |||||||||||||||| | |||| | |||| |||| ||||||| |||||| ||||||| |||| |||||||||    
T  17288322 tcccttaacttattttttgttttaattttggtcccctaactataaagtgtctcaatttggtcccataagtctt 17288250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 333 - 448
Target Start/End: Original strand, 26406158 - 26406273
Alignment:
Q  333 ttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctctgttagttttgaacatcaaa 432  Q
    |||||| ||||||||| |||| || |||||| |||||||  ||  |||| |||| |||||||||   |||| |||||||| |||| |||| ||| | |||    
T  26406158 ttttcaatttgatcccataacgataaagtgtctcaatttgatctcataactcttctgccgtttaacattttggtcatctccgttattttttaaccttaaa 26406257  T
Q  433 tatctaaggtgaacca 448  Q
    | ||||||||||||||    
T  26406258 tgtctaaggtgaacca 26406273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 314 - 377
Target Start/End: Original strand, 40881105 - 40881168
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcct 377  Q
    ||||||||||||||||| ||| ||||| || |||||||||||||||  || ||||||| |||||    
T  40881105 tcccttaacttattttaatttctcagtgtggtcccttaactattaaccgtttcaatttggtcct 40881168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 320 - 419
Target Start/End: Complemental strand, 43007745 - 43007646
Alignment:
Q  320 aacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctctgttagt 419  Q
    ||||||||||   |||||| |||| |||  ||||||| |||||| ||||||| |||| |||||||||||| |||||| | |||||||  |||| ||||||    
T  43007745 aacttatttttgattttcaatttggtcctctaactataaagtgtctcaatttggtcccataagtcttatgtcgtttactattttagttctctccgttagt 43007646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 318 - 396
Target Start/End: Complemental strand, 22746418 - 22746340
Alignment:
Q  318 ttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgttta 396  Q
    |||||||||||| | |||||| |||  |||| ||||||| |||||| ||||||| |||| |||| |||| |||||||||    
T  22746418 ttaacttattttttgttttcaatttagtcccctaactataaagtgtctcaatttggtcccataaatcttgtgccgttta 22746340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 318 - 356
Target Start/End: Original strand, 29408264 - 29408302
Alignment:
Q  318 ttaacttattttattttttcagtttgatcccttaactat 356  Q
    |||| |||||||||||| |||||||||||||||||||||    
T  29408264 ttaatttattttattttctcagtttgatcccttaactat 29408302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 668 - 726
Target Start/End: Original strand, 37236078 - 37236136
Alignment:
Q  668 cctactatttaatcaccacacaaccatcattatcatcgtcatctataatcattaacacc 726  Q
    |||||||||||||||| |||  ||||||||| ||||| |||||||| ||||| ||||||    
T  37236078 cctactatttaatcactacatcaccatcattgtcatcttcatctatcatcatcaacacc 37236136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 295 - 377
Target Start/End: Complemental strand, 47928551 - 47928469
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcct 377  Q
    |||||||||||||  ||  ||||||||||||||||| ||| | |||||  || |||||||||||| ||| ||||||| |||||    
T  47928551 ggcttaatacatccctccgtcccttaacttattttaatttcttagtttagtctcttaactattaaatgtttcaatttggtcct 47928469  T

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Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 340 - 418
Target Start/End: Original strand, 48754036 - 48754114
Alignment:
Q  340 tttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctctgttag 418  Q
    |||| |||| ||| ||| |||||| ||||||||||||||||| ||||||| ||||||   |||||||| |||| |||||    
T  48754036 tttggtcccataattataaagtgtttcaatttagtcctataaatcttatgtcgtttaccattttagtcctctccgttag 48754114  T

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Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 319 - 412
Target Start/End: Original strand, 7146799 - 7146891
Alignment:
Q  319 taacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctc 412  Q
    ||||||||||| | |||||| |||| |||| ||||||| |||||| ||||||| ||||| ||| ||||||| | |||| |||||| ||| ||||    
T  7146799 taacttattttctgttttcaatttggtcccctaactataaagtgtttcaatttggtcct-taaatcttatgtcatttactgttttggtcctctc 7146891  T

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Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 314 - 403
Target Start/End: Complemental strand, 7148160 - 7148071
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgtttt 403  Q
    |||||||||||||||| | |||||| |||| ||   ||||||| |||||| ||||||| ||||  ||| ||||||| |||||| ||||||    
T  7148160 tcccttaacttattttctgttttcaatttggtcatctaactataaagtgtttcaatttggtcccttaaatcttatgtcgtttactgtttt 7148071  T

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Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 314 - 371
Target Start/End: Complemental strand, 33071740 - 33071683
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaattt 371  Q
    ||||||||||||||||| ||| |||||||  | ||||||||||||| ||| |||||||    
T  33071740 tcccttaacttattttaatttctcagtttagttccttaactattaaatgtttcaattt 33071683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 295 - 396
Target Start/End: Original strand, 33458305 - 33458405
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 394  Q
    ||||||||||||| ||   ||| ||||||||||||   |||||| |||| ||| |||||||| |||||| |||| ||||||| ||||||||| | |||||    
T  33458305 ggcttaatacatcatttggtcctttaacttatttttggttttcattttggtcctttaactataaagtgtctcaa-ttagtcccataagtcttcttccgtt 33458403  T
Q  395 ta 396  Q
    ||    
T  33458404 ta 33458405  T

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Target: scaffold0098 (Bit Score: 153; Significance: 1e-80; HSPs: 3)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 515 - 709
Target Start/End: Original strand, 41123 - 41314
Alignment:
Q  515 aaaaaataaccgttgaatcatgtaggatctattgtactttactgtgaaccactaacacctaagttaatccattcatattcttcttcttccctcgtcatct 614  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||| ||||||    
T  41123 aaaagataaccgttgaatcatgtaggatttattgtactttactgtgaaccactaacacctaagttaatccattcat---cttcttcttccctcatcatct 41219  T
Q  615 tgaacaacaacttcatcaataaaatctagaaaatcccaaaactaataattaaacctactatttaatcaccacacaaccatcattatcatcgtcat 709  Q
    | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  41220 taaacaacaacttcatcaataaaatctagaaaatcccaaaaataataattaaacctactatttaatcaccacacaaccatcattgtcatcttcat 41314  T

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Target: scaffold0098; HSP #2
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 314 - 481
Target Start/End: Original strand, 40930 - 41089
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 413  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||| ||        |||  ||||||||| || |||||| |||||||||  |||||    
T  40930 tcccttaaccttttttattttttcagtttgatcccttaactattaagtttg--------gtctcataagtcttctgtcgtttactgttttagttctctct 41021  T
Q  414 gttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcatatgccttactaa 481  Q
    ||||||||| |||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||    
T  41022 gttagtttttaacatcaaatgtctaaggtgaaccatatttaaaggtggtccaccatatgccttactaa 41089  T

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Target: scaffold0098; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 289 - 419
Target Start/End: Complemental strand, 42472 - 42343
Alignment:
Q  289 ttttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttat 388  Q
    ||||| ||||||||||||||| |  ||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||  ||| |||| |||| |    
T  42472 tttttcggcttaatacatctt-cggtcccttaacttattttattttctcagtttgatcccttaactattacgtgtatcaatttgatcccataaatcttct 42374  T
Q  389 gccgtttattgttttagtcatctctgttagt 419  Q
    | |||||| | |||| ||| |||||||||||    
T  42373 gtcgtttactattttggtcctctctgttagt 42343  T

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Target: chr4 (Bit Score: 123; Significance: 9e-63; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 123; E-Value: 9e-63
Query Start/End: Original strand, 515 - 757
Target Start/End: Complemental strand, 38418918 - 38418682
Alignment:
Q  515 aaaaaataaccgttgaatcatgtaggatctattgtactttactgtgaaccactaacacctaagttaatccattcatattcttcttcttccctcgtcatct 614  Q
    |||||||| | ||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||   |||||||||||||||||||||    
T  38418918 aaaaaatagctgttaaatcatgtagggtctattgtactttactatgaaccactaacacctaagttaatccattcat---cttcttcttccctcgtcatct 38418822  T
Q  615 tgaacaacaacttcatcaataaaatctagaaaatcccaaaactaataattaaacctactatttaatcaccacacaaccatcattatcatcgtcatctata 714  Q
    | ||||||||||||||||||||| || |||||||||||||| || |||||||||||| |||||||| | ||||||   |||||  ||||| ||||||||     
T  38418821 tcaacaacaacttcatcaataaactccagaaaatcccaaaaatactaattaaacctattatttaataatcacaca---atcatcgtcatcttcatctatc 38418725  T
Q  715 atcattaacaccattcttcttaaatattattcttcatcttcat 757  Q
    ||||| |||| | || ||| |||||||| ||||||||||||||    
T  38418724 atcatcaacatccttgttcctaaatattcttcttcatcttcat 38418682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 317 - 481
Target Start/End: Complemental strand, 38419116 - 38418952
Alignment:
Q  317 cttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctctgtt 416  Q
    |||||||||||||||||| ||||||| || |||||| |||||||||||||||||| |||  ||||||||| ||||||||| ||||||||||||||| |||    
T  38419116 cttaacttattttattttctcagtttaattccttaattattaagtgtgtcaatttggtctcataagtcttctgccgtttactgttttagtcatctccgtt 38419017  T
Q  417 agttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcatatgccttactaa 481  Q
    |||||| ||||| |||  | |||| ||||||||||||| || ||||||| |||||||||||||||    
T  38419016 agtttttaacattaaacgtttaagatgaaccatatttataggtggtccaccatatgccttactaa 38418952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 289 - 470
Target Start/End: Complemental strand, 47668724 - 47668543
Alignment:
Q  289 ttttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttat 388  Q
    |||| |||||||||||||| ||   ||| |||||||||||| | |||||| |||| |||| ||||||| |||||| |||| || ||||  ||  || | |    
T  47668724 ttttatggcttaatacatcatttggtcctttaacttattttctgttttcactttggtcccctaactataaagtgtctcaaattggtcccttatatcatct 47668625  T
Q  389 gccgtttattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcata 470  Q
    ||||||||||||||| ||| |||||||||||||| ||||||||||||||||||| ||||||  |||||||||||||| ||||    
T  47668624 gccgtttattgttttggtcctctctgttagtttttaacatcaaatatctaaggtaaaccatggttaaagatggtccaccata 47668543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 523 - 726
Target Start/End: Complemental strand, 2293417 - 2293204
Alignment:
Q  523 accgttgaatcatgtaggatctattgtactttactgtgaaccactaacacctaagttaatccattcatattcttcttc-----ttccctcgtcatcttga 617  Q
    ||||||||||||||| || |||||||||||||||||||||||||| ||||||||   |||| |||||| |||||||||     |  | || | ||||| |    
T  2293417 accgttgaatcatgtggggtctattgtactttactgtgaaccactcacacctaataaaatcgattcatcttcttcttccgtcatctcttcatgatcttca 2293318  T
Q  618 acaacaacttcatcaataaaatctagaaaatcc--caaaact---aataattaaacctactatttaatcaccacacaaccatcattatcatcgtcatcta 712  Q
    ||||||||||||||||||||||| | |||||||  ||||| |   ||||||||  |||||| |||||||| ||||||||||||||| ||||| |||||||    
T  2293317 acaacaacttcatcaataaaatccaaaaaatcccacaaaaataaaaataattattcctactctttaatcatcacacaaccatcattgtcatcttcatcta 2293218  T
Q  713 taatcattaacacc 726  Q
    | ||||| ||||||    
T  2293217 tcatcataaacacc 2293204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 289 - 419
Target Start/End: Complemental strand, 50531883 - 50531753
Alignment:
Q  289 ttttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttat 388  Q
    |||||||||||||||||||   |  ||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||| |||| |||| |||| |    
T  50531883 ttttttggcttaatacatcccactgtcccttaacttattttattttctcaatttgatcccttaactattaagtgtctcaatttggtcccataactctttt 50531784  T
Q  389 gccgtttattgttttagtcatctctgttagt 419  Q
    | |||||| | |||||||||| |||||||||    
T  50531783 gtcgtttactattttagtcatttctgttagt 50531753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 292 - 445
Target Start/End: Original strand, 44159077 - 44159230
Alignment:
Q  292 tttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgcc 391  Q
    |||||||||||| ||||  |  ||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||||| || | | || |||| ||||    
T  44159077 tttggcttaatatatctcccggtcctttaacttattttattttttcagtttgatctcttaactattaagtgtttcaatttggttccacaactcttctgcc 44159176  T
Q  392 gtttattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaa 445  Q
    ||||||| |||| |||||||| ||||||||| ||    ||||||||||||||||    
T  44159177 gtttattattttggtcatctccgttagtttttaatcctaaatatctaaggtgaa 44159230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 293 - 422
Target Start/End: Complemental strand, 34439783 - 34439654
Alignment:
Q  293 ttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccg 392  Q
    |||||||||||||||  ||| ||||||||||||||||||||| ||||| || |||||||||||| || ||| ||||||| |||| |||| |||| |||||    
T  34439783 ttggcttaatacatccctcagtcccttaacttattttattttctcagtgtggtcccttaactataaaatgtttcaatttggtcccataaatcttctgccg 34439684  T
Q  393 tttattgttttagtcatctctgttagtttt 422  Q
    |||| | |||| |||||||| |||||||||    
T  34439683 tttactattttggtcatctccgttagtttt 34439654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 294 - 443
Target Start/End: Original strand, 34438400 - 34438549
Alignment:
Q  294 tggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgt 393  Q
    |||||||||||||||  |  || |||||||||||||||||| |||||||  |||||||||||| |||||| ||||||| |||| |||| |||| ||||||    
T  34438400 tggcttaatacatctcccgatctcttaacttattttattttctcagtttagtcccttaactataaagtgtctcaatttggtcccataaatcttctgccgt 34438499  T
Q  394 ttattgttttagtcatctctgttagttttgaacatcaaatatctaaggtg 443  Q
    ||| | |||| ||  |||||||||||||| ||| |||||| |||| ||||    
T  34438500 ttactattttggttctctctgttagtttttaacctcaaatgtctatggtg 34438549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 295 - 396
Target Start/End: Original strand, 38417548 - 38417649
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 394  Q
    ||||||||||||| | |  ||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||| |||| |||| ||||||| ||||    
T  38417548 ggcttaatacatcctcctgtcctttaacttattttattttctcagtttggtcccttaactattaagtgtgtcaatttggtcccataaatcttatgtcgtt 38417647  T
Q  395 ta 396  Q
    ||    
T  38417648 ta 38417649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 295 - 419
Target Start/End: Original strand, 6138992 - 6139116
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 394  Q
    ||||||||||||| | |  ||||||||||||||||||||| |||||||| |||||||| |||||| ||| ||||||| |||  |||| |||||||  |||    
T  6138992 ggcttaatacatcctccgatcccttaacttattttattttctcagtttggtcccttaattattaaatgtctcaatttggtctcataactcttatgttgtt 6139091  T
Q  395 tattgttttagtcatctctgttagt 419  Q
    |||| |||| |||||||||||||||    
T  6139092 tattattttggtcatctctgttagt 6139116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 314 - 477
Target Start/End: Complemental strand, 39592391 - 39592228
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 413  Q
    |||||||||||||||||| |||||| |||  |||| ||||||| |||||| |||| || ||||  || ||||| || |||||| |||||| ||  ||||     
T  39592391 tcccttaacttattttatgttttcactttagtcccctaactataaagtgtctcaaattggtccattatgtcttctgtcgtttactgttttggttctctcc 39592292  T
Q  414 gttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcatatgcctta 477  Q
    |||| |||| |||||||||| |||||||||| |||| ||||||| ||||||| ||||| |||||    
T  39592291 gttaatttttaacatcaaatgtctaaggtgagccatgtttaaaggtggtccatcatatacctta 39592228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 295 - 465
Target Start/End: Original strand, 86798 - 86968
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 394  Q
    ||||||||||||| || | || ||||| |||||||   |||||| |||| | || ||||||| |||  | ||||||| |||| |||| | || |||||||    
T  86798 ggcttaatacatcatttagtctcttaatttatttttagttttcactttggttccctaactataaagcatctcaatttggtcccataaatattctgccgtt 86897  T
Q  395 tattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtcca 465  Q
    || |||||| ||| |||| ||||||||| |||||||||| ||||||||||||||| ||||||| |||||||    
T  86898 tactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtcca 86968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 318 - 386
Target Start/End: Original strand, 41348257 - 41348325
Alignment:
Q  318 ttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtctt 386  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||| |||||||||    
T  41348257 ttaacttattttattttctcagtttgatcccttaactattaagtgtgtcaatttgatcccataagtctt 41348325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 314 - 371
Target Start/End: Complemental strand, 41349627 - 41349570
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaattt 371  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  41349627 tcccttaacttattttattttctcagtttgatcccttaacttttaagtgtgtcaattt 41349570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 293 - 474
Target Start/End: Original strand, 43894098 - 43894279
Alignment:
Q  293 ttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccg 392  Q
    ||||||||||||||| |  | ||||||||||||||||   ||||||||||| |||| ||||||| || ||| ||||||| |||  |||| | || | | |    
T  43894098 ttggcttaatacatcatatagtcccttaacttatttttggttttcagtttggtcccctaactataaaatgtctcaatttggtcacataactatttttctg 43894197  T
Q  393 tttattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcatatgcc 474  Q
    ||   | |||| ||||| || ||| ||||| |||||||||| ||| |||||||||||||||||||||||||||  |||||||    
T  43894198 ttacctcttttggtcatatccgttggtttttaacatcaaatgtctgaggtgaaccatatttaaagatggtccacaatatgcc 43894279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 317 - 448
Target Start/End: Original strand, 17319059 - 17319190
Alignment:
Q  317 cttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctctgtt 416  Q
    |||||||||||||| ||| ||||||||||| ||||||||| |||||| ||||||| || | |||| |||| || |||||| | |||| ||| || | |||    
T  17319059 cttaacttattttaatttctcagtttgatctcttaactataaagtgtttcaatttggttccataaatcttctggcgtttactattttggtcttcaccgtt 17319158  T
Q  417 agttttgaacatcaaatatctaaggtgaacca 448  Q
    |||||| ||| | |||| ||||||||||||||    
T  17319159 agtttttaaccttaaatgtctaaggtgaacca 17319190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 291 - 377
Target Start/End: Original strand, 11482787 - 11482873
Alignment:
Q  291 ttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcct 377  Q
    ||||||||||||||||||  |  ||||||||||||||||| ||| |||||||| ||||||||||||||| ||| ||||||| |||||    
T  11482787 ttttggcttaatacatctcccggtcccttaacttattttaatttctcagtttggtcccttaactattaaatgtttcaatttggtcct 11482873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 288 - 394
Target Start/End: Complemental strand, 43419503 - 43419397
Alignment:
Q  288 attttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtctta 387  Q
    |||||| ||||||||||||||  |  ||||||||||||||||||||| |||||||  |||||||||||| |||||| ||||||| ||||  ||| ||||     
T  43419503 atttttcggcttaatacatctcccggtcccttaacttattttattttctcagtttcgtcccttaactataaagtgtctcaatttggtcccttaactcttc 43419404  T
Q  388 tgccgtt 394  Q
    |||||||    
T  43419403 tgccgtt 43419397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 314 - 448
Target Start/End: Original strand, 50530517 - 50530651
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 413  Q
    ||||||||||||||||||||| |||||||| ||| ||||||||||||||| ||||  | |||| |||| |||| |  |||||| | |||| ||||| |||    
T  50530517 tcccttaacttattttattttctcagtttggtcctttaactattaagtgtctcaaaatggtcccataactcttctatcgtttactattttggtcatttct 50530616  T
Q  414 gttagttttgaacatcaaatatctaaggtgaacca 448  Q
    |||| |||| ||| | |||  ||||||||||||||    
T  50530617 gttaatttttaaccttaaaagtctaaggtgaacca 50530651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 314 - 396
Target Start/End: Original strand, 56000301 - 56000383
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgttta 396  Q
    ||||||||||||||||   |||||| ||||||||| ||||||| |||||| ||||||||||||||||| |||| |||||||||    
T  56000301 tcccttaacttatttttgattttcattttgatcccctaactataaagtgtctcaatttagtcctataactcttctgccgttta 56000383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 295 - 371
Target Start/End: Original strand, 5417299 - 5417375
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaattt 371  Q
    |||||||||||||| |   ||||||||||||||||| |||||||||||| ||||||||||||||| ||| |||||||    
T  5417299 ggcttaatacatctcttggtcccttaacttattttaatttttcagtttggtcccttaactattaaatgtttcaattt 5417375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 295 - 419
Target Start/End: Complemental strand, 44128455 - 44128331
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 394  Q
    ||||||||||||| ||   ||| ||||||||||||   |||||| |||| |||| ||||||| |||||| ||||||||||||| ||| ||||||||||||    
T  44128455 ggcttaatacatcgtttggtcctttaacttatttttcattttcaatttggtcccctaactataaagtgtctcaatttagtcctttaaatcttatgccgtt 44128356  T
Q  395 tattgttttagtcatctctgttagt 419  Q
    || | |||| ||| |||| ||||||    
T  44128355 tactattttggtcctctccgttagt 44128331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 319 - 470
Target Start/End: Original strand, 35787815 - 35787966
Alignment:
Q  319 taacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctctgttag 418  Q
    |||||||||||   |||||| |||| |||  ||||||| || ||| ||||||| |||| |||| |||| || ||||||  ||||| ||| |||| |||||    
T  35787815 taacttatttttggttttcactttggtcctctaactataaaatgtttcaatttggtcccataaatcttctgtcgtttaccgttttggtcctctccgttag 35787914  T
Q  419 ttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcata 470  Q
    |||| |||||||||| |||||||| || ||| ||||||| ||||||| ||||    
T  35787915 tttttaacatcaaatgtctaaggtaaatcatgtttaaaggtggtccaccata 35787966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 611 - 757
Target Start/End: Original strand, 43894433 - 43894584
Alignment:
Q  611 atcttgaacaacaacttcatcaataaaatctagaaaatcccaaaacta-----ataattaaacctactatttaatcaccacacaaccatcattatcatcg 705  Q
    ||||| ||||||||||||||| |||||||| ||||||| ||||||  |     |||| ||||| || | ||||||||| |||||| ||||||| |||||     
T  43894433 atcttcaacaacaacttcatccataaaatccagaaaattccaaaaaaataaaaataaataaacatattctttaatcactacacaatcatcattgtcatct 43894532  T
Q  706 tcatctataatcattaacaccattcttcttaaatattattcttcatcttcat 757  Q
    ||||||||  | || ||| |  |||||| |||||||||||||||||||||||    
T  43894533 tcatctatcgttatcaacgctcttcttcctaaatattattcttcatcttcat 43894584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 295 - 465
Target Start/End: Complemental strand, 6616332 - 6616162
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 394  Q
    ||||||||||||| ||   ||||||||||||||||   |||||| |||| |||| ||||||| |||||| |||| || ||||  ||  | || || ||||    
T  6616332 ggcttaatacatcatttggtcccttaacttattttccgttttcactttggtcccctaactataaagtgtctcaaattggtcccttatatattctgtcgtt 6616233  T
Q  395 tattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtcca 465  Q
    ||||||||| ||| ||||  |||||||| |||||||||| || ||||||||| ||  |||||||| |||||    
T  6616232 tattgttttggtcctctcctttagtttttaacatcaaatgtcaaaggtgaacaatgattaaagatagtcca 6616162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 285 - 419
Target Start/End: Complemental strand, 33377495 - 33377361
Alignment:
Q  285 ataattttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtc 384  Q
    ||||| ||| ||||||||||||| ||   ||||||||||||||||   |||||| |||| |||| ||||||| |||||| ||||||| |||| |||| ||    
T  33377495 ataatctttaggcttaatacatcatttggtcccttaacttatttttgattttcaatttggtcccctaactataaagtgtctcaatttggtcccataaatc 33377396  T
Q  385 ttatgccgtttattgttttagtcatctctgttagt 419  Q
    || ||||||||| | |||| ||| |||| ||||||    
T  33377395 ttctgccgtttactattttggtcctctccgttagt 33377361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 314 - 446
Target Start/End: Complemental strand, 30683129 - 30682997
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 413  Q
    |||||||| |||||||   |||||| |||| |||||||||||| |||||| ||||||| |||| |||| ||||  |||||| ||| |||| ||| ||||     
T  30683129 tcccttaatttatttttgattttcattttggtcccttaactataaagtgtctcaatttggtcccataaatcttcggccgttaattcttttggtcttctcc 30683030  T
Q  414 gttagttttgaacatcaaatatctaaggtgaac 446  Q
    ||||||||| ||||  |||||| |||| |||||    
T  30683029 gttagtttttaacaataaatatttaagatgaac 30682997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 293 - 396
Target Start/End: Original strand, 52658904 - 52659007
Alignment:
Q  293 ttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccg 392  Q
    |||||||||||||| |||   |||||||||||||||| | |||||| |||| |||| ||||||| || ||| ||||||| || |||||| |||| |||||    
T  52658904 ttggcttaatacatgttttggtcccttaacttattttttattttcactttggtcccctaactataaaatgtttcaatttggttctataaatcttctgccg 52659003  T
Q  393 ttta 396  Q
    ||||    
T  52659004 ttta 52659007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 290 - 396
Target Start/End: Complemental strand, 28103612 - 28103506
Alignment:
Q  290 tttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatg 389  Q
    |||||||||||| ||||| ||   ||||||||||||||||    ||||| |||| |||||||||||| |||||| ||||||| |||| ||||| ||| ||    
T  28103612 tttttggcttaacacatcatttggtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataagacttctg 28103513  T
Q  390 ccgttta 396  Q
    |||||||    
T  28103512 ccgttta 28103506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 409 - 477
Target Start/End: Complemental strand, 2293532 - 2293464
Alignment:
Q  409 tctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcatatgcctta 477  Q
    |||| ||||||||| || ||||||| ||| | ||||| ||||||||||||||||||| |||||||||||    
T  2293532 tctccgttagtttttaaaatcaaatgtctgaagtgaatcatatttaaagatggtccaccatatgcctta 2293464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 295 - 371
Target Start/End: Original strand, 43418028 - 43418104
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaattt 371  Q
    |||||||||||||   || ||| |||| |||||||||||| |||||||| |||||||||||| |||||| |||||||    
T  43418028 ggcttaatacatcccccagtcctttaaattattttattttctcagtttggtcccttaactataaagtgtttcaattt 43418104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 293 - 448
Target Start/End: Complemental strand, 11115103 - 11114948
Alignment:
Q  293 ttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccg 392  Q
    ||||||||||||||| ||   ||||||||||||||||   |||||| |||| |||| ||||||| |||| | ||||||| |||| |||| |||| || ||    
T  11115103 ttggcttaatacatcatttggtcccttaacttattttcagttttcattttggtcccctaactataaagtatctcaatttggtcccataactcttctgtcg 11115004  T
Q  393 tttattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaacca 448  Q
    ||||   |||| | | |||| ||||||||| ||| | |||| |||||| |||||||    
T  11115003 tttaccattttggacctctccgttagtttttaaccttaaatgtctaagctgaacca 11114948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 663 - 726
Target Start/End: Original strand, 18091866 - 18091929
Alignment:
Q  663 ttaaacctactatttaatcaccacacaaccatcattatcatcgtcatctataatcattaacacc 726  Q
    ||||||||||||||||||||| |||| |||||||||  |||| |||||||| ||||| ||||||    
T  18091866 ttaaacctactatttaatcactacaccaccatcattgacatcttcatctatcatcatcaacacc 18091929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 314 - 377
Target Start/End: Original strand, 26045146 - 26045209
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcct 377  Q
    ||||||||||||||||| ||| ||||| || |||||||||||||||  || |||||||||||||    
T  26045146 tcccttaacttattttaatttctcagtgtggtcccttaactattaaacgtttcaatttagtcct 26045209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 289 - 396
Target Start/End: Complemental strand, 26393254 - 26393147
Alignment:
Q  289 ttttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttat 388  Q
    |||||||| |||||||||  ||   |||||||||||||||| | |||| | |||||||| |||||||| |||||| ||||||| |||| |||| |||| |    
T  26393254 ttttttggtttaatacatgatttggtcccttaacttattttttatttttattttgatcctttaactataaagtgtctcaatttggtcccataactcttct 26393155  T
Q  389 gccgttta 396  Q
    | ||||||    
T  26393154 gtcgttta 26393147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 282 - 396
Target Start/End: Complemental strand, 37560433 - 37560319
Alignment:
Q  282 ataataattttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataa 381  Q
    |||||| ||||  ||||||||||||| ||   ||||||||||||||||   |||||| |||| |||| ||||||| |||||| ||||||| |||| ||||    
T  37560433 ataatagttttaaggcttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggtcccataa 37560334  T
Q  382 gtcttatgccgttta 396  Q
     ||||| | ||||||    
T  37560333 atcttacgacgttta 37560319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 526 - 600
Target Start/End: Original strand, 43894331 - 43894405
Alignment:
Q  526 gttgaatcatgtaggatctattgtactttactgtgaaccactaacacctaagttaatccattcatattcttcttc 600  Q
    |||||||  |||||| |||||||||||||| ||| ||||||||||| ||||   ||||||||||| |||||||||    
T  43894331 gttgaattttgtagggtctattgtactttagtgtcaaccactaacatctaataaaatccattcatcttcttcttc 43894405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 292 - 382
Target Start/End: Complemental strand, 56001392 - 56001302
Alignment:
Q  292 tttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataag 382  Q
    |||||||||||||||  ||   |||||||||||||||| | |||||| ||||  ||| ||||||| |||||| ||||||| ||||||||||    
T  56001392 tttggcttaatacatgctttggtcccttaacttattttttattttcattttggccccctaactataaagtgtctcaatttggtcctataag 56001302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 295 - 396
Target Start/End: Original strand, 29663638 - 29663738
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 394  Q
    ||||||||||||| || | |||||||| |||||||   |||||| ||||||||| ||||||| || ||| ||||||| |||| |||| |||| |||||||    
T  29663638 ggcttaatacatcctttaatcccttaatttatttttggttttcattttgatccc-taactataaattgtctcaatttggtcccataactcttctgccgtt 29663736  T
Q  395 ta 396  Q
    ||    
T  29663737 ta 29663738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 400 - 465
Target Start/End: Complemental strand, 29687994 - 29687929
Alignment:
Q  400 ttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtcca 465  Q
    |||| ||||||||  |||||||| |||||||||| |||| || ||||||||||||||| |||||||    
T  29687994 ttttggtcatctcctttagtttttaacatcaaatgtctacggcgaaccatatttaaaggtggtcca 29687929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 295 - 396
Target Start/End: Original strand, 31711087 - 31711188
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 394  Q
    ||||||||||||| ||   ||||||||||||||||    ||||| |||| ||| |||||||| |||||| ||||||| |||  |||||||||||| ||||    
T  31711087 ggcttaatacatcatttggtcccttaacttatttttggatttcattttggtcctttaactataaagtgtctcaatttggtctcataagtcttatgtcgtt 31711186  T
Q  395 ta 396  Q
    ||    
T  31711187 ta 31711188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 400 - 477
Target Start/End: Complemental strand, 36604857 - 36604780
Alignment:
Q  400 ttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcatatgcctta 477  Q
    |||| ||| |||| ||||||||| || |||||||||||||| ||||||||||| |||  ||| ||| |||||||||||    
T  36604857 ttttggtcctctccgttagtttttaatatcaaatatctaagatgaaccatattaaaaagtggcccaccatatgcctta 36604780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 290 - 351
Target Start/End: Complemental strand, 44160536 - 44160475
Alignment:
Q  290 tttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatccctta 351  Q
    |||| ||||||||||||| | |  ||||||||||||||||||||| |||||||| |||||||    
T  44160536 ttttaggcttaatacatcctccggtcccttaacttattttattttctcagtttggtccctta 44160475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 314 - 359
Target Start/End: Original strand, 47242966 - 47243011
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaa 359  Q
    ||||||||||||||||| ||| ||||||| ||||||||||||||||    
T  47242966 tcccttaacttattttaatttctcagtttaatcccttaactattaa 47243011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 345 - 417
Target Start/End: Original strand, 5687220 - 5687292
Alignment:
Q  345 tcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctctgtta 417  Q
    |||||||||||| |||||| ||||||| |||| |||| |||| ||||||||| | |||| |||||||| ||||    
T  5687220 tcccttaactataaagtgtctcaatttggtcccataaatcttttgccgtttactattttggtcatctccgtta 5687292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 294 - 394
Target Start/End: Original strand, 29686250 - 29686350
Alignment:
Q  294 tggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgt 393  Q
    |||||||||||||| || | ||||||||||||||||   |||||| |||| |||||||||||| || ||| |||| || ||||  || |||||||| |||    
T  29686250 tggcttaatacatcatttagtcccttaacttatttttggttttcactttggtcccttaactataaattgtctcaaattggtcccttatgtcttatgtcgt 29686349  T
Q  394 t 394  Q
    |    
T  29686350 t 29686350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 295 - 355
Target Start/End: Complemental strand, 38371926 - 38371866
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaacta 355  Q
    ||||||||||||| |||  || ||||||||||||| | |||||||||||||||| ||||||    
T  38371926 ggcttaatacatcattcggtctcttaacttattttctgttttcagtttgatcccctaacta 38371866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 289 - 377
Target Start/End: Original strand, 43708825 - 43708913
Alignment:
Q  289 ttttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcct 377  Q
    |||||||||||||||||||   |  || |||||||||||||| ||| |||||||  ||| ||||||||||| ||| ||||||| |||||    
T  43708825 ttttttggcttaatacatcccccggtctcttaacttattttaatttctcagtttagtccattaactattaaatgtttcaatttggtcct 43708913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 318 - 422
Target Start/End: Complemental strand, 44305077 - 44304973
Alignment:
Q  318 ttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctctgtta 417  Q
    |||||||||||| | |||||| |||| |||| ||||||  |||||| ||||||| ||||||||| ||||  || ||||| | |||| |||||||| ||||    
T  44305077 ttaacttattttttgttttcaatttggtcccctaactacaaagtgtctcaatttggtcctataaatcttccgctgtttactattttggtcatctccgtta 44304978  T
Q  418 gtttt 422  Q
     ||||    
T  44304977 atttt 44304973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 295 - 422
Target Start/End: Original strand, 11113737 - 11113864
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 394  Q
    ||||||||||||| ||   || |||||||||||||   |||||| |||  |||||||||||| |||||| ||||||| |||  |||| |||| |||||||    
T  11113737 ggcttaatacatcatttggtcacttaacttattttcggttttcattttagtcccttaactataaagtgtctcaatttggtctcataactcttctgccgtt 11113836  T
Q  395 tattgttttagtcatctctgttagtttt 422  Q
    ||   |||| ||||| || |||||||||    
T  11113837 taccattttggtcatttccgttagtttt 11113864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 290 - 397
Target Start/End: Original strand, 15786942 - 15787049
Alignment:
Q  290 tttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatg 389  Q
    |||| ||||||||||||| ||   ||| |||||||||||| | |||||| |||| |||| ||||||| || ||| ||||||| |||| |||| | || ||    
T  15786942 ttttaggcttaatacatcatttggtccattaacttattttttgttttcattttgttcccctaactataaactgtctcaatttggtcccataacttttctg 15787041  T
Q  390 ccgtttat 397  Q
    ||||||||    
T  15787042 ccgtttat 15787049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 318 - 445
Target Start/End: Original strand, 17494145 - 17494272
Alignment:
Q  318 ttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctctgtta 417  Q
    |||| |||||||| ||| ||| |||| ||||||||||||||||||| | ||||| |||   || ||||||||||||||| | | || || ||||| ||||    
T  17494145 ttaatttattttaatttctcattttggtcccttaactattaagtgttttaatttggtctcttatgtcttatgccgtttactatattggttatctccgtta 17494244  T
Q  418 gttttgaacatcaaatatctaaggtgaa 445  Q
     |||| ||| | |||| ||||| |||||    
T  17494245 ctttttaaccttaaatgtctaacgtgaa 17494272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 295 - 386
Target Start/End: Complemental strand, 46796147 - 46796056
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtctt 386  Q
    ||||||||||||| ||   ||||||||||||||||   |||| | |||| |||| ||||||| |||||| ||||||| |||| |||||||||    
T  46796147 ggcttaatacatcgtttggtcccttaacttatttttggttttaattttggtcccctaactataaagtgtctcaatttggtcccataagtctt 46796056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 314 - 377
Target Start/End: Original strand, 47572600 - 47572663
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcct 377  Q
    ||||||||||||||||| ||| |||| ||  ||||||||||||||| ||| ||||||| |||||    
T  47572600 tcccttaacttattttaatttctcagcttagtcccttaactattaaatgtttcaatttggtcct 47572663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 293 - 363
Target Start/End: Complemental strand, 96804 - 96734
Alignment:
Q  293 ttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgt 363  Q
    ||||||||||||||  ||   |||||||||||||||||| |||||| |||| |||| ||||||| ||||||    
T  96804 ttggcttaatacattgtttggtcccttaacttattttatgttttcactttggtcccctaactataaagtgt 96734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 295 - 377
Target Start/End: Original strand, 50496990 - 50497072
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcct 377  Q
    ||||||||||||| | || ||||| ||||||||||| ||| |||||||  | ||||||||||||| ||| | ||||| |||||    
T  50496990 ggcttaatacatcctccagtccctcaacttattttaatttctcagtttagttccttaactattaaatgttttaatttggtcct 50497072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 314 - 396
Target Start/End: Complemental strand, 55953954 - 55953872
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgttta 396  Q
    ||||||||||||||||   |||||| |||| |||| ||||||| || ||| ||||||| ||||  ||| ||||||||||||||    
T  55953954 tcccttaacttatttttgattttcaatttggtcccataactataaaatgtctcaatttggtcccgtaaatcttatgccgttta 55953872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 314 - 395
Target Start/End: Complemental strand, 1273534 - 1273454
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgttt 395  Q
    ||||||||||||||||   |||| | |||| |||| ||||||| |||||| ||||||| |||| |||||||||||| |||||    
T  1273534 tcccttaacttatttttggttttaa-tttggtcccctaactataaagtgtctcaatttggtcccataagtcttatgtcgttt 1273454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 314 - 359
Target Start/End: Complemental strand, 47573746 - 47573701
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaa 359  Q
    ||||||||||||||||| ||| ||||| || |||||||||||||||    
T  47573746 tcccttaacttattttaatttctcagtgtggtcccttaactattaa 47573701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 112; Significance: 3e-56; HSPs: 66)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 530 - 757
Target Start/End: Original strand, 14764459 - 14764679
Alignment:
Q  530 aatcatgtaggatctattgtactttactgtgaaccactaacacctaagttaatccattcatattcttcttcttccctcgtcatcttgaacaacaacttca 629  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||   |||| ||||||| || ||||||| |||||||||||||    
T  14764459 aatcatgtagggtctattgcactttactgtgaaccactaacacctaagttaatccattca---tctttttcttccatcatcatcttcaacaacaacttca 14764555  T
Q  630 tcaataaaatctagaaaatcccaaaactaataattaaacctactatttaatcaccacacaaccatcattatcatcgtcatctataatcattaacaccatt 729  Q
    |||||||| || |||||||||||||| || ||||||||||| ||||||||| ||||||||||||||    | ||| |||||||| ||||| |||| | ||    
T  14764556 tcaataaactccagaaaatcccaaaaatattaattaaaccttctatttaat-accacacaaccatc---gtgatcttcatctatcatcatcaacatcctt 14764651  T
Q  730 cttcttaaatattattcttcatcttcat 757  Q
    |||| |||||||| ||||||||||||||    
T  14764652 cttcctaaatattcttcttcatcttcat 14764679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 314 - 481
Target Start/End: Original strand, 14764243 - 14764410
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 413  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||| |||  ||||||||| || |||||| ||||||||||||||||    
T  14764243 tcccttaacttattttatttttttagtttgatcccttaattattaagtgtgttaatttggtctcataagtcttctgtcgtttactgttttagtcatctct 14764342  T
Q  414 gttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcatatgccttactaa 481  Q
    ||||||||| ||||| |||| | ||||||||||| ||||||||| ||||||| |||| ||| ||||||    
T  14764343 gttagtttttaacattaaatgtttaaggtgaaccttatttaaaggtggtccaccatacgccatactaa 14764410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 291 - 470
Target Start/End: Complemental strand, 49141621 - 49141442
Alignment:
Q  291 ttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgc 390  Q
    ||||||||||||||||| ||   ||| |||| |||||||   |||||| || ||||||||||||||||||||| |||| || |||| |||| | || |||    
T  49141621 ttttggcttaatacatcgtttggtcctttaatttatttttggttttcacttcgatcccttaactattaagtgtttcaaattggtcccataatttttctgc 49141522  T
Q  391 cgtttattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcata 470  Q
    ||||||   ||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||||| || |||| ||||    
T  49141521 cgtttaccattttagtcatctccgttagtttttaacatcaaatgtctaaggtgaaccatatttaaagttgttccaccata 49141442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 290 - 386
Target Start/End: Complemental strand, 40110778 - 40110682
Alignment:
Q  290 tttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtctt 386  Q
    |||| |||||||||||||  ||  ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  40110778 ttttaggcttaatacatccctcgatcccttaacttattttattttctcagtttgatcccttaactattaagtgtgtcaatttggtcccataagtctt 40110682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 526 - 726
Target Start/End: Complemental strand, 51218855 - 51218651
Alignment:
Q  526 gttgaatcatgtaggatctattgtactttactgtgaaccactaacacctaagttaatccattcatattcttcttc-----ttccctcgtcatcttgaaca 620  Q
    |||||||||||| || ||||||||||||| |||||||||||| ||||||||   |||| |||||| |||||||||     |  | |||| ||||| ||||    
T  51218855 gttgaatcatgtggggtctattgtactttcctgtgaaccactcacacctaataaaatcgattcatcttcttcttccctcatctcttcgtgatcttcaaca 51218756  T
Q  621 acaacttcatcaataaaatctagaaaatccca--aaactaataattaaacctactatttaatcaccacacaaccatcattatcatcgtcatctataatca 718  Q
    |||||||||||| ||||||| |||||||||||  ||| ||| ||||   |||||| |||||||| ||||||||||||||| ||||| |||||||| | ||    
T  51218755 acaacttcatcagtaaaatccagaaaatcccacaaaaataaaaatt---cctactctttaatcatcacacaaccatcattgtcatcttcatctatcagca 51218659  T
Q  719 ttaacacc 726  Q
    | ||||||    
T  51218658 tcaacacc 51218651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 297 - 422
Target Start/End: Original strand, 40811192 - 40811317
Alignment:
Q  297 cttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgttta 396  Q
    |||||||||||  ||  |||||||||||||| |||||| |||||||||||||||||||||||| ||| |||||||  ||| |||| |||| |||||||||    
T  40811192 cttaatacatccctcggtcccttaacttattctattttctcagtttgatcccttaactattaaatgtctcaatttgatcccataactcttttgccgttta 40811291  T
Q  397 ttgttttagtcatctctgttagtttt 422  Q
    || |||| |||||||| |||||||||    
T  40811292 ttattttggtcatctccgttagtttt 40811317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 290 - 386
Target Start/End: Original strand, 26801933 - 26802029
Alignment:
Q  290 tttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtctt 386  Q
    |||||||||||||||||| | |  || |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||  |||||||||    
T  26801933 tttttggcttaatacatcctccggtctcttagcttattttattttttcagtttgatcccttaactattaagtgtgtaaatttagtctcataagtctt 26802029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 289 - 448
Target Start/End: Original strand, 14169608 - 14169767
Alignment:
Q  289 ttttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttat 388  Q
    ||||| ||||||||||||    || ||||||||||||||||||||| |||||||| ||| |||||||| || ||| ||||||| |||| |||| |||| |    
T  14169608 tttttaggcttaatacattccccagtcccttaacttattttattttctcagtttggtcctttaactataaaatgtctcaatttggtcccataaatctttt 14169707  T
Q  389 gccgtttattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaacca 448  Q
    | |||||| | |||| ||| | |||||||||||| ||| | |||| ||||||||||||||    
T  14169708 gtcgtttactattttggtcttatctgttagtttttaaccttaaatgtctaaggtgaacca 14169767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 295 - 422
Target Start/End: Complemental strand, 36511452 - 36511325
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 394  Q
    |||||||||||||   || |||||||| |||||||||||| |||||||| |||||||||||| |||||| ||||||| |||| |||| |||| || ||||    
T  36511452 ggcttaatacatcccccagtcccttaatttattttattttctcagtttggtcccttaactataaagtgtctcaatttggtcccataaatcttctgtcgtt 36511353  T
Q  395 tattgttttagtcatctctgttagtttt 422  Q
    || | |||| |||||||| |||||||||    
T  36511352 tactattttggtcatctccgttagtttt 36511325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 285 - 422
Target Start/End: Original strand, 22167764 - 22167901
Alignment:
Q  285 ataattttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtc 384  Q
    ||||||||  |||||||||||||    | ||||||||||||||||| ||| |||||||  |||||||| |||||||||| ||||||| |||| |||| ||    
T  22167764 ataattttaaggcttaatacatcccctaatcccttaacttattttaatttctcagtttagtcccttaaatattaagtgtttcaatttggtcccataaatc 22167863  T
Q  385 ttatgccgtttattgttttagtcatctctgttagtttt 422  Q
    || ||||||||||| |||| ||  ||||||||||||||    
T  22167864 ttctgccgtttattattttggttctctctgttagtttt 22167901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 314 - 443
Target Start/End: Original strand, 36509825 - 36509954
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 413  Q
    ||||||||||||||||||||| |||||||| |||||||||||| |||||| ||||||| || | |||| |||| ||||||||| | |||| ||  ||||     
T  36509825 tcccttaacttattttattttctcagtttggtcccttaactataaagtgtttcaatttggttccataaatcttctgccgtttactattttggttctctcc 36509924  T
Q  414 gttagttttgaacatcaaatatctaaggtg 443  Q
    ||||||||| ||| |||||| |||| ||||    
T  36509925 gttagtttttaacctcaaatgtctatggtg 36509954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 292 - 465
Target Start/End: Original strand, 44977213 - 44977386
Alignment:
Q  292 tttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgcc 391  Q
    |||||||||||||||  ||   ||||||||||||||||   |||||| |||| |||| ||||||| |||||| | ||  | ||||  || ||||| ||||    
T  44977213 tttggcttaatacattatttggtcccttaacttatttttggttttcactttggtcccctaactataaagtgtcttaaactggtcccttatgtcttctgcc 44977312  T
Q  392 gtttattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtcca 465  Q
    |||   |  ||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||    
T  44977313 gttacctcatttggtcatctctgttagtttttaacatcaaatgtctaaggtgaaccatatttaaaggtggtcca 44977386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 289 - 470
Target Start/End: Complemental strand, 51726971 - 51726790
Alignment:
Q  289 ttttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttat 388  Q
    |||||| ||||||||||||   |  ||||||||||||||||||||| |||||||| ||  |||||||| |||||| ||||||| || | |||| |||| |    
T  51726971 tttttttgcttaatacatcccccggtcccttaacttattttattttctcagtttggtcatttaactataaagtgtctcaatttggttccataaatcttct 51726872  T
Q  389 gccgtttattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcata 470  Q
    | |||||| | |||||||| || | ||||||||| ||| | |||| ||||||||||||||  |||| || ||||||| ||||    
T  51726871 gtcgtttactattttagtcctcaccgttagtttttaaccttaaatgtctaaggtgaaccaactttataggtggtccaccata 51726790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 318 - 470
Target Start/End: Original strand, 9633793 - 9633945
Alignment:
Q  318 ttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctctgtta 417  Q
    ||||||||||||   |||||| |||| |||||||||||| |||||| ||||||| ||  ||||| ||||   |||||||  |||||  || |||| ||||    
T  9633793 ttaacttatttttggttttcattttggtcccttaactataaagtgtctcaatttggttatataaatcttcaaccgtttacagttttgatcctctccgtta 9633892  T
Q  418 gttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcata 470  Q
    ||||| |||||||||| ||||||||||||||| ||||||| ||||||| ||||    
T  9633893 gtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccata 9633945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 314 - 386
Target Start/End: Original strand, 24516348 - 24516420
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtctt 386  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| |||  |||||||||    
T  24516348 tcccttaacttattttattttctgagtttgatcccttaactattaagtgtgtcaatttggtctcataagtctt 24516420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 314 - 386
Target Start/End: Original strand, 40109375 - 40109447
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtctt 386  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||| |||| ||||    
T  40109375 tcccttaacttattttattttctcagtttgatcccttaacttttaagtgtgtcaatttggtcccataaatctt 40109447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 290 - 462
Target Start/End: Complemental strand, 52743102 - 52742930
Alignment:
Q  290 tttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatg 389  Q
    |||||||||||||||||| ||   ||||||| ||||||||   |||||| |||| |||| ||||||| |||||| |||| || ||||  || || |||||    
T  52743102 tttttggcttaatacatcatttggtcccttagcttatttttcattttcactttggtcccctaactataaagtgtctcaaattggtcccttaggttttatg 52743003  T
Q  390 ccgtttattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggt 462  Q
     |||||| |||| | ||| |||| ||||||||| |||||||||| | ||||||||||||| ||||||| ||||    
T  52743002 tcgtttactgttatggtcctctccgttagtttttaacatcaaatgtttaaggtgaaccatgtttaaaggtggt 52742930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 295 - 470
Target Start/End: Original strand, 8092593 - 8092768
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 394  Q
    ||||||||||||||  |  ||||||||||||||||||||| ||||| |  ||||||||||||||||||| ||||||| || | |||| ||||   |||||    
T  8092593 ggcttaatacatctcccggtcccttaacttattttattttctcagtgtagtcccttaactattaagtgtatcaatttggttccataaatcttcctccgtt 8092692  T
Q  395 tattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcata 470  Q
    || || ||| ||| | || |||||| || ||| | |||||||||||||||||||  |||| || ||||||| ||||    
T  8092693 tactgatttggtcctttccgttagtatttaaccttaaatatctaaggtgaaccaactttataggtggtccaccata 8092768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 314 - 371
Target Start/End: Complemental strand, 26803318 - 26803261
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaattt 371  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  26803318 tcccttaacttattttattttctcagtttgatctcttaactattaagtgtgtcaattt 26803261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 295 - 419
Target Start/End: Original strand, 25785963 - 25786087
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 394  Q
    ||||||||||||| ||   ||||||||||||||||   |||||| |||| |||| ||||||| |||||| ||||||| |||| |||| ||||||| ||||    
T  25785963 ggcttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggtcccataaatcttatgtcgtt 25786062  T
Q  395 tattgttttagtcatctctgttagt 419  Q
    |||| |||| ||| |||||||||||    
T  25786063 tattattttggtcctctctgttagt 25786087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 314 - 462
Target Start/End: Complemental strand, 26056249 - 26056101
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 413  Q
    ||||||||||||||||    ||||| |||| |||| ||||||| |||||| ||||||| |||| |||| |||| || |||||| | |||| ||| ||||     
T  26056249 tcccttaacttatttttggatttcattttggtcccctaactataaagtgtctcaatttggtcccataaatcttttgtcgtttactattttggtcctctcc 26056150  T
Q  414 gttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggt 462  Q
    ||||| ||| |||||||||  ||||| ||||||||||||||||| ||||    
T  26056149 gttagattttaacatcaaaagtctaaagtgaaccatatttaaaggtggt 26056101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 409 - 477
Target Start/End: Complemental strand, 51218973 - 51218905
Alignment:
Q  409 tctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcatatgcctta 477  Q
    |||| ||||||||| |||||||||| ||||| ||||||||||||||||||||||||| |||||||||||    
T  51218973 tctccgttagtttttaacatcaaatgtctaaagtgaaccatatttaaagatggtccaccatatgcctta 51218905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 318 - 381
Target Start/End: Complemental strand, 14765192 - 14765129
Alignment:
Q  318 ttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataa 381  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||||| |||| ||||    
T  14765192 ttaacttattttattttctcagtttggtcccttaactattaagtgtgtcaatttggtcccataa 14765129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 289 - 422
Target Start/End: Complemental strand, 40812736 - 40812605
Alignment:
Q  289 ttttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttat 388  Q
    |||||||||||||||||||   |  |||||||||||||||||||||   |||||| ||||||||||||||||||| ||||||| ||  ||||| |||| |    
T  40812736 ttttttggcttaatacatcc--cggtcccttaacttattttattttcctagtttggtcccttaactattaagtgtctcaatttggttatataactcttct 40812639  T
Q  389 gccgtttattgttttagtcatctctgttagtttt 422  Q
    ||| |||| | |||| ||| | ||||||||||||    
T  40812638 gccatttactattttggtcttttctgttagtttt 40812605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 314 - 386
Target Start/End: Complemental strand, 24517716 - 24517644
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtctt 386  Q
    ||||||||||||||||||||| ||||||| ||||||||| | |||||||||||||||| |||| |||| ||||    
T  24517716 tcccttaacttattttattttctcagtttaatcccttaatttttaagtgtgtcaatttggtcccataaatctt 24517644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 314 - 448
Target Start/End: Complemental strand, 2973110 - 2972976
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 413  Q
    |||||||||||||||| | |||||| |||  |||||||| ||| |||||| ||||||| |||||||||||||||  ||||||| |  | | ||| | |||    
T  2973110 tcccttaacttattttttgttttcattttagtcccttaattataaagtgtctcaatttggtcctataagtcttaccccgtttactagtgtggtcctttct 2973011  T
Q  414 gttagttttgaacatcaaatatctaaggtgaacca 448  Q
    ||||||||| ||| | |||| ||||||||| ||||    
T  2973010 gttagtttttaactttaaatgtctaaggtgtacca 2972976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 319 - 421
Target Start/End: Original strand, 19464619 - 19464721
Alignment:
Q  319 taacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctctgttag 418  Q
    ||||||||||||||||||||||||| |||||||| ||| |||||| ||||||| || | | || |||| ||||||||| | |||| ||||||||  ||||    
T  19464619 taacttattttattttttcagtttggtcccttaattataaagtgtttcaatttggttccacaaatcttctgccgtttactattttggtcatctccattag 19464718  T
Q  419 ttt 421  Q
    |||    
T  19464719 ttt 19464721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 314 - 380
Target Start/End: Complemental strand, 38283841 - 38283775
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctata 380  Q
    |||||||||||||||||||||||||||||  |||  || ||||||||||||||||||| ||||||||    
T  38283841 tcccttaacttattttattttttcagtttagtcctctatctattaagtgtgtcaatttggtcctata 38283775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 314 - 443
Target Start/End: Complemental strand, 19466307 - 19466178
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 413  Q
    |||||| |||||||||||||| |||||||| ||| |||||||| |||||| ||||||| |||| |||| |||| || |||||| | || | ||  ||||     
T  19466307 tccctttacttattttattttctcagtttggtcctttaactataaagtgtctcaatttggtcccataaatcttctgtcgtttactattgtggttctctcc 19466208  T
Q  414 gttagttttgaacatcaaatatctaaggtg 443  Q
    ||||||||| ||| |||||| |||| ||||    
T  19466207 gttagtttttaacctcaaatgtctatggtg 19466178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 523 - 576
Target Start/End: Complemental strand, 26056040 - 26055987
Alignment:
Q  523 accgttgaatcatgtaggatctattgtactttactgtgaaccactaacacctaa 576  Q
    |||||||||| ||||||| ||||||||||||| |||||||||||||||||||||    
T  26056040 accgttgaattatgtagggtctattgtactttcctgtgaaccactaacacctaa 26055987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 283 - 396
Target Start/End: Complemental strand, 47411581 - 47411468
Alignment:
Q  283 taataattttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataag 382  Q
    |||||| |||||||||||||||||| ||   ||||||||||||||||   |||||  |||| | || ||||||| |||||| ||||||| |||| ||||     
T  47411581 taataaatttttggcttaatacatcatttggtcccttaacttattttcggttttccatttggttccctaactataaagtgtctcaatttggtcccataaa 47411482  T
Q  383 tcttatgccgttta 396  Q
    ||||||||||||||    
T  47411481 tcttatgccgttta 47411468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 314 - 422
Target Start/End: Original strand, 13641271 - 13641379
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 413  Q
    ||||||||||||||||   |||||| |||| |||| ||||||| |||||| ||||||| |||| |||| |||| ||||||||| | |||| ||||||||     
T  13641271 tcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcccataaatcttctgccgtttactattttggtcatctcc 13641370  T
Q  414 gttagtttt 422  Q
    |||| ||||    
T  13641371 gttattttt 13641379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 314 - 462
Target Start/End: Original strand, 50678380 - 50678525
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 413  Q
    ||||||||||||||||    ||||| ||||||||||||||||| || ||| ||||||| | ||| ||| |||  |||||||   | |||| ||| |||||    
T  50678380 tcccttaacttatttttgaatttcattttgatcccttaactataaaatgtctcaatttgg-cct-taaatctc-tgccgttacctcttttggtcctctct 50678476  T
Q  414 gttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggt 462  Q
    ||||||||| |||||||||  ||||||||||||||||||||||| ||||    
T  50678477 gttagtttttaacatcaaaactctaaggtgaaccatatttaaaggtggt 50678525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 526 - 576
Target Start/End: Complemental strand, 37624460 - 37624410
Alignment:
Q  526 gttgaatcatgtaggatctattgtactttactgtgaaccactaacacctaa 576  Q
    ||||||||||||||| ||||||||| |||| ||||||||||||||||||||    
T  37624460 gttgaatcatgtagggtctattgtattttagtgtgaaccactaacacctaa 37624410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 298 - 355
Target Start/End: Complemental strand, 22169337 - 22169280
Alignment:
Q  298 ttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaacta 355  Q
    |||||||||||  || ||||||||||||||||| ||| ||||||||||||||||||||    
T  22169337 ttaatacatctcccagtcccttaacttattttaatttctcagtttgatcccttaacta 22169280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 314 - 418
Target Start/End: Complemental strand, 3979415 - 3979311
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 413  Q
    ||||||||||||||||    ||||| |||| |||||||||||| |||||| ||||||| |||| |||| |||| ||||||||| | |||| ||| ||||     
T  3979415 tcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataattcttctgccgtttactattttggtcctctcc 3979316  T
Q  414 gttag 418  Q
    |||||    
T  3979315 gttag 3979311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 295 - 419
Target Start/End: Complemental strand, 25787285 - 25787161
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 394  Q
    ||||||||||||| ||   ||||||||||||||||   |||||| |||| |||| ||||||| |||||| ||||||| |||  |||| ||||||||| ||    
T  25787285 ggcttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggtctcataaatcttatgccatt 25787186  T
Q  395 tattgttttagtcatctctgttagt 419  Q
    || | |||| ||| |||| ||||||    
T  25787185 tactattttggtcctctccgttagt 25787161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 295 - 359
Target Start/End: Complemental strand, 43808642 - 43808578
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaa 359  Q
    ||||||||||||| |||  ||||||||||||||||| ||| ||||| || |||||||||||||||    
T  43808642 ggcttaatacatccttcggtcccttaacttattttaatttctcagtgtggtcccttaactattaa 43808578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 414 - 465
Target Start/End: Complemental strand, 22766822 - 22766771
Alignment:
Q  414 gttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtcca 465  Q
    ||||||||| |||| ||||||||||| ||||||||||||||||| |||||||    
T  22766822 gttagtttttaacaccaaatatctaaagtgaaccatatttaaaggtggtcca 22766771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 414 - 465
Target Start/End: Complemental strand, 23082128 - 23082077
Alignment:
Q  414 gttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtcca 465  Q
    ||||||||| |||| ||||||||||| ||||||||||||||||| |||||||    
T  23082128 gttagtttttaacaccaaatatctaaagtgaaccatatttaaaggtggtcca 23082077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 296 - 371
Target Start/End: Original strand, 38280846 - 38280921
Alignment:
Q  296 gcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaattt 371  Q
    |||||||||||| | |  ||| |||| |||||||||||| |||||||| ||| ||||||||||| |||||||||||    
T  38280846 gcttaatacatcctccggtcctttaagttattttattttctcagtttggtccattaactattaattgtgtcaattt 38280921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 295 - 422
Target Start/End: Original strand, 47560134 - 47560261
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 394  Q
    ||||||||||||| ||   ||||||| ||||||||   |||||| |||| |||| ||||||| |||||| |||||||  |||| ||| | || |||||||    
T  47560134 ggcttaatacatcatttggtcccttaccttattttcgattttcactttggtcccctaactataaagtgtttcaatttgatcctttaaatattctgccgtt 47560233  T
Q  395 tattgttttagtcatctctgttagtttt 422  Q
    || |||||| |||||||| |||| ||||    
T  47560234 tactgttttggtcatctccgttaatttt 47560261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 663 - 726
Target Start/End: Original strand, 52759649 - 52759712
Alignment:
Q  663 ttaaacctactatttaatcaccacacaaccatcattatcatcgtcatctataatcattaacacc 726  Q
    ||||||||||||||||||||| |||| |||||||||  |||| |||||||| ||||| ||||||    
T  52759649 ttaaacctactatttaatcactacaccaccatcattgacatcttcatctatcatcatcaacacc 52759712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 314 - 396
Target Start/End: Complemental strand, 13930777 - 13930695
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgttta 396  Q
    ||||||||||||||||   |||||| |||| |||  ||||||| |||||| ||||||| |||| |||||||||||| ||||||    
T  13930777 tcccttaacttatttttggttttcaatttggtcctctaactataaagtgtctcaatttggtcccataagtcttatgtcgttta 13930695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 297 - 359
Target Start/End: Complemental strand, 21246594 - 21246532
Alignment:
Q  297 cttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaa 359  Q
    ||||||||||||  |  ||||||||||||||||| ||| |||||||| |||||||||||||||    
T  21246594 cttaatacatctcccggtcccttaacttattttaatttctcagtttggtcccttaactattaa 21246532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 526 - 576
Target Start/End: Original strand, 27689513 - 27689563
Alignment:
Q  526 gttgaatcatgtaggatctattgtactttactgtgaaccactaacacctaa 576  Q
    |||| |||||||||| ||||||||| |||| ||||||||||||||||||||    
T  27689513 gttggatcatgtagggtctattgtattttagtgtgaaccactaacacctaa 27689563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 526 - 576
Target Start/End: Complemental strand, 30551479 - 30551429
Alignment:
Q  526 gttgaatcatgtaggatctattgtactttactgtgaaccactaacacctaa 576  Q
    |||| |||||||||| ||||||||| |||| ||||||||||||||||||||    
T  30551479 gttggatcatgtagggtctattgtattttagtgtgaaccactaacacctaa 30551429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 293 - 359
Target Start/End: Original strand, 38451545 - 38451611
Alignment:
Q  293 ttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaa 359  Q
    ||||||||||||||| ||   |||||||||||||||||| |||||| |||| |||| ||||||||||    
T  38451545 ttggcttaatacatcatttggtcccttaacttattttatgttttcaatttggtcccctaactattaa 38451611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 295 - 377
Target Start/End: Original strand, 44979430 - 44979512
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcct 377  Q
    ||||||||||||| || | |||||||||||||||| | |||||| |||| || ||||||||| |||||| |||| || |||||    
T  44979430 ggcttaatacatcatttaatcccttaacttattttttgttttcactttggtctcttaactataaagtgtctcaaattggtcct 44979512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 289 - 470
Target Start/End: Original strand, 21276983 - 21277164
Alignment:
Q  289 ttttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttat 388  Q
    ||||||||||||||||||  ||   ||||||||||||||||   |||||| |||| |  | ||||||| |||| | ||||||| |||| |||| |||| |    
T  21276983 ttttttggcttaatacattatttggtcccttaacttatttttggttttcaatttggttgcctaactataaagtatctcaatttggtcccataaatcttct 21277082  T
Q  389 gccgtttattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcata 470  Q
    |||||||| | ||||  || ||||  ||||||||  || | |||| ||||||||||||||  |||| || ||||||| ||||    
T  21277083 gccgtttactattttgatcctctccattagtttttgaccttaaatgtctaaggtgaaccaactttataggtggtccaccata 21277164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 400 - 465
Target Start/End: Original strand, 27689383 - 27689448
Alignment:
Q  400 ttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtcca 465  Q
    |||| ||| |||| ||||||||| |||| ||||| ||||| ||||||||||||||||| |||||||    
T  27689383 ttttggtcctctccgttagtttttaacaccaaatgtctaaagtgaaccatatttaaaggtggtcca 27689448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 297 - 397
Target Start/End: Original strand, 13929292 - 13929392
Alignment:
Q  297 cttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgttta 396  Q
    ||||||||||| ||   ||||||||||||||||   |||||| |||| |||||||||||| |||||| ||||||| ||||  ||| |||| | |||||||    
T  13929292 cttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccttaactataaagtgtctcaatttggtcccgtaaatcttcttccgttta 13929391  T
Q  397 t 397  Q
    |    
T  13929392 t 13929392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 666 - 726
Target Start/End: Original strand, 17244467 - 17244527
Alignment:
Q  666 aacctactatttaatcaccacacaaccatcattatcatcgtcatctataatcattaacacc 726  Q
    |||||||||||||||||| |||  ||||||||| ||||| |||||||| ||||| ||||||    
T  17244467 aacctactatttaatcactacatcaccatcattgtcatcttcatctatcatcatcaacacc 17244527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 314 - 386
Target Start/End: Complemental strand, 50679923 - 50679851
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtctt 386  Q
    ||||||||||||||||   |||| | |||| |||||||||||| |||||| ||||||| |||| |||||||||    
T  50679923 tcccttaacttatttttagtttttattttggtcccttaactataaagtgtctcaatttggtcccataagtctt 50679851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 293 - 376
Target Start/End: Original strand, 48934234 - 48934317
Alignment:
Q  293 ttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcc 376  Q
    |||||||||||||| ||| | ||||||||||||||||    ||||| |||| |||| ||||||| |||||| ||||||| ||||    
T  48934234 ttggcttaatacatgttttaatcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcc 48934317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 537 - 576
Target Start/End: Original strand, 50678599 - 50678638
Alignment:
Q  537 taggatctattgtactttactgtgaaccactaacacctaa 576  Q
    |||| |||||||||||||||||||||| ||||||||||||    
T  50678599 tagggtctattgtactttactgtgaacgactaacacctaa 50678638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 314 - 381
Target Start/End: Original strand, 51725357 - 51725424
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataa 381  Q
    ||||||||||||||||| ||| |||||||  ||| |||||||| |||||| |||||||  ||||||||    
T  51725357 tcccttaacttattttaatttctcagtttagtcctttaactataaagtgtctcaatttgatcctataa 51725424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 318 - 417
Target Start/End: Complemental strand, 52181403 - 52181304
Alignment:
Q  318 ttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctctgtta 417  Q
    |||||||||||| | |||||| |||| |||  ||||||| |||||| |||||||||||  |||| |||||||  ||||| | |||| |||||||| ||||    
T  52181403 ttaacttattttttattttcaatttggtcctctaactataaagtgtctcaatttagtctcataaatcttatgttgtttactattttggtcatctccgtta 52181304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 663 - 725
Target Start/End: Complemental strand, 7111316 - 7111254
Alignment:
Q  663 ttaaacctactatttaatcaccacacaaccatcattatcatcgtcatctataatcattaacac 725  Q
    ||||||| | ||||||||||| |||| ||||||||| ||||| |||||||| ||||| |||||    
T  7111316 ttaaaccaattatttaatcactacaccaccatcattgtcatcttcatctatcatcatcaacac 7111254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 400 - 462
Target Start/End: Complemental strand, 30551605 - 30551543
Alignment:
Q  400 ttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggt 462  Q
    |||| |||||||| ||||||||| | |||||||| ||||| |||||||||||| |||| ||||    
T  30551605 ttttggtcatctccgttagtttttagcatcaaatgtctaaagtgaaccatattaaaaggtggt 30551543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 295 - 377
Target Start/End: Original strand, 30743082 - 30743164
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcct 377  Q
    ||||||||||||||  |  ||| ||||||||||||| ||| ||| | || ||||||||||||||| ||| ||||||| |||||    
T  30743082 ggcttaatacatctcccggtcctttaacttattttaatttctcaatgtggtcccttaactattaaatgtttcaatttggtcct 30743164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 318 - 368
Target Start/End: Original strand, 45042627 - 45042677
Alignment:
Q  318 ttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaa 368  Q
    |||| |||||||||||| ||||||||||||||||||| |||| ||| ||||    
T  45042627 ttaatttattttattttctcagtttgatcccttaactgttaaatgtttcaa 45042677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 295 - 396
Target Start/End: Complemental strand, 14071324 - 14071223
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 394  Q
    ||||||||||||| ||   |||||||| |||||||   |||||| |||| |||  ||||||| |||||| ||||||| |||| ||||||||| || ||||    
T  14071324 ggcttaatacatcatttggtcccttaatttatttttggttttcaatttggtcctctaactataaagtgtctcaatttggtcccataagtcttctgtcgtt 14071225  T
Q  395 ta 396  Q
    ||    
T  14071224 ta 14071223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 314 - 371
Target Start/End: Original strand, 34653449 - 34653506
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaattt 371  Q
    ||||||||||||||||   |||||| |||| |||||||||||| |||||| |||||||    
T  34653449 tcccttaacttattttcggttttcactttggtcccttaactataaagtgtctcaattt 34653506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 400 - 457
Target Start/End: Complemental strand, 37624586 - 37624529
Alignment:
Q  400 ttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaag 457  Q
    |||| ||| |||| ||||||||| |||||||||| ||||| |||||||||||| ||||    
T  37624586 ttttggtcctctccgttagtttttaacatcaaatgtctaaagtgaaccatattaaaag 37624529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 290 - 419
Target Start/End: Complemental strand, 47136813 - 47136684
Alignment:
Q  290 tttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatg 389  Q
    |||| ||||||||||||| ||   ||| ||||||||||||   |||||| || | |||| ||||||| |||||| ||||||| ||   |||| |||||||    
T  47136813 ttttaggcttaatacatcatttgatccattaacttatttttggttttcaattaggtcccctaactataaagtgtctcaatttggtgtcataaatcttatg 47136714  T
Q  390 ccgtttattgttttagtcatctctgttagt 419  Q
    ||||||| | |||| ||| |||| ||||||    
T  47136713 ccgtttactattttggtcctctccgttagt 47136684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 98; Significance: 7e-48; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 559 - 756
Target Start/End: Original strand, 3532446 - 3532637
Alignment:
Q  559 tgaaccactaacacctaagttaatccattcatattcttcttcttccctcgtcatcttgaacaacaacttcatcaataaaatctagaaaatcccaaaacta 658  Q
    ||||||||||||||||||||||||||||| ||   ||| |||||||||| ||||||| ||||||||||||||||||||| || | |||||||||||| ||    
T  3532446 tgaaccactaacacctaagttaatccatttat---ctttttcttccctcatcatcttcaacaacaacttcatcaataaactccataaaatcccaaaaata 3532542  T
Q  659 ataattaaacctactatttaatcaccacacaaccatcattatcatcgtcatctataatcattaacaccattcttcttaaatattattcttcatcttca 756  Q
    |||||||||||||||||||||| ||||||||||   |||||||||| ||||| || ||||| |||| |  ||||| |||||||| |||||||||||||    
T  3532543 ataattaaacctactatttaataaccacacaac---cattatcatcttcatcaatcatcatcaacatccctcttcctaaatattcttcttcatcttca 3532637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 314 - 481
Target Start/End: Original strand, 3532208 - 3532375
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 413  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| |||  ||||||||| || | |||| | ||||||||||||||    
T  3532208 tcccttaatttattttattttttcagtttgatcccttaattattaagtgtgtcaatttggtcacataagtcttttgtcatttactattttagtcatctct 3532307  T
Q  414 gttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcatatgccttactaa 481  Q
    |||  |||| ||||| |||| | ||||||||||||||||||||| ||||||| ||||||| |||||||    
T  3532308 gttgatttttaacattaaatgtttaaggtgaaccatatttaaaggtggtccaccatatgcattactaa 3532375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 314 - 470
Target Start/End: Complemental strand, 7983797 - 7983641
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 413  Q
    ||||||||||||||||||||| ||||||| || ||||||||||||||||||||||||| |||||||||||||| | ||||||| |||||||||| | |      
T  7983797 tcccttaacttattttattttctcagtttaattccttaactattaagtgtgtcaatttggtcctataagtcttctaccgtttactgttttagtccttttc 7983698  T
Q  414 gttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcata 470  Q
    || | |||| |||||||||| ||||||||||||||| ||||||| ||||||| ||||    
T  7983697 gtcaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccata 7983641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 290 - 462
Target Start/End: Original strand, 23177663 - 23177836
Alignment:
Q  290 tttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatccct-taactattaagtgtgtcaatttagtcctataagtcttat 388  Q
    |||||||||||||||||| ||   |||||||| |||||||   |||||| |||| ||||  ||||||| |||||| ||||||| |||| |||| |||| |    
T  23177663 tttttggcttaatacatcatttggtcccttaatttatttttggttttcattttggtccccctaactataaagtgtctcaatttggtcccataaatcttct 23177762  T
Q  389 gccgtttattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggt 462  Q
    ||||||||   |||| ||| |||| ||||||||| ||||| ||| ||||||| |||||||||||||||||||||    
T  23177763 gccgtttaccattttggtcctctccgttagtttttaacataaaaaatctaagatgaaccatatttaaagatggt 23177836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 290 - 462
Target Start/End: Original strand, 23588920 - 23589093
Alignment:
Q  290 tttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatccct-taactattaagtgtgtcaatttagtcctataagtcttat 388  Q
    |||||||||||||||||| ||   |||||||| |||||||   |||||| |||| ||||  ||||||| |||||| ||||||| |||| |||| |||| |    
T  23588920 tttttggcttaatacatcatttggtcccttaatttatttttggttttcattttggtccccctaactataaagtgtctcaatttggtcccataaatcttct 23589019  T
Q  389 gccgtttattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggt 462  Q
    ||||||||   |||| ||| |||| ||||||||| ||||| ||| ||||||| |||||||||||||||||||||    
T  23589020 gccgtttaccattttggtcctctccgttagtttttaacataaaaaatctaagatgaaccatatttaaagatggt 23589093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 318 - 411
Target Start/End: Complemental strand, 14510607 - 14510514
Alignment:
Q  318 ttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatct 411  Q
    ||||||||||||||||| | |||||  ||||||||||||||||||| ||||||| ||||||||| |||| ||||||||| | ||||||||||||    
T  14510607 ttaacttattttattttcttagtttagtcccttaactattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcatct 14510514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 334 - 462
Target Start/End: Original strand, 12852920 - 12853048
Alignment:
Q  334 tttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctctgttagttttgaacatcaaat 433  Q
    ||||| |||| |||| ||||||| |||||| ||||||| |||| |||| |||| |  |||||| | |||| |||||||| ||||| ||| |||||||||     
T  12852920 tttcattttggtcccctaactataaagtgtctcaatttggtcccataaatcttctatcgtttactattttggtcatctccgttagattttaacatcaaaa 12853019  T
Q  434 atctaaggtgaaccatatttaaagatggt 462  Q
    |||||||||||||||||||||||| ||||    
T  12853020 atctaaggtgaaccatatttaaaggtggt 12853048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 292 - 371
Target Start/End: Original strand, 7982304 - 7982383
Alignment:
Q  292 tttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaattt 371  Q
    |||||||||||||||||  |  ||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  7982304 tttggcttaatacatctcccgatcctttaacttattttattttctcagtttgatcccttaactataaagtgtgtcaattt 7982383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 295 - 470
Target Start/End: Complemental strand, 25570991 - 25570816
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 394  Q
    ||||||||||||| |||  ||||||||||||||||||||| ||||| |  ||||||||||||||||||| |||||||  | | |||||||||   || ||    
T  25570991 ggcttaatacatccttcggtcccttaacttattttattttctcagtgtagtcccttaactattaagtgtttcaatttgattccataagtcttcctccatt 25570892  T
Q  395 tattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcata 470  Q
    || | |||||||| | || ||||||||| ||  | |||| ||||||||||||||  |||| || ||||||| ||||    
T  25570891 tactattttagtcctttccgttagtttttaaacttaaatgtctaaggtgaaccaactttataggtggtccaccata 25570816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 314 - 470
Target Start/End: Complemental strand, 29424714 - 29424558
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 413  Q
    ||||||||||||||||   |||| |  ||| |||| ||||||| |||||| ||||||| ||||  | | | || |||||||||||||||| ||| |||||    
T  29424714 tcccttaacttatttttggtttttacattggtcccctaactataaagtgtttcaatttggtcccttgaatattctgccgtttattgttttggtcctctct 29424615  T
Q  414 gttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcata 470  Q
    |||||||   |||||||||| |||||| |||||||| ||||||| ||||||| ||||    
T  29424614 gttagttactaacatcaaatgtctaagatgaaccatgtttaaaggtggtccatcata 29424558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 295 - 470
Target Start/End: Original strand, 14509204 - 14509379
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 394  Q
    ||||||||||||| | |  ||||||||||||||||||||| ||| |||| |||||||||||| |||||| | ||||  |||| |||| |||| || ||||    
T  14509204 ggcttaatacatcctccgatcccttaacttattttattttctcactttggtcccttaactataaagtgttttaattcggtcccataaatcttctgtcgtt 14509303  T
Q  395 tattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcata 470  Q
    || | |||| ||| |||| |||| |||| ||| | |||| |||||||| |||||  |||| || ||||||| ||||    
T  14509304 tactattttggtcctctccgttaatttttaaccttaaatgtctaaggtaaaccaactttataggtggtccaccata 14509379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 318 - 396
Target Start/End: Complemental strand, 3533724 - 3533646
Alignment:
Q  318 ttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgttta 396  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||||||||| |||  |||| |||| || ||||||    
T  3533724 ttaacttattttatttttttagtttggtcccttaactattaagtgtgtcaatttggtctcataaatcttttgtcgttta 3533646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 316 - 465
Target Start/End: Original strand, 10367255 - 10367404
Alignment:
Q  316 ccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctctgt 415  Q
    ||||||||||||||   |||||| |||| |  ||||||||| |||||| |||||||||||  ||||||||| |||||||||   |||||||| |||| ||    
T  10367255 ccttaacttatttttgattttcaatttggtttcttaactataaagtgtctcaatttagtctcataagtcttctgccgtttacctttttagtcgtctccgt 10367354  T
Q  416 tagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtcca 465  Q
    | ||||| ||| | |||| ||||||||||||||  |||| || |||||||    
T  10367355 ttgtttttaaccttaaatgtctaaggtgaaccaactttataggtggtcca 10367404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 400 - 477
Target Start/End: Original strand, 14714592 - 14714669
Alignment:
Q  400 ttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcatatgcctta 477  Q
    |||| ||| |||| ||||||||| |||||||||| ||||||||||||||||||||||| ||||||| |||| ||||||    
T  14714592 ttttggtcctctccgttagtttttaacatcaaatgtctaaggtgaaccatatttaaaggtggtccaccatacgcctta 14714669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 523 - 600
Target Start/End: Original strand, 14714715 - 14714792
Alignment:
Q  523 accgttgaatcatgtaggatctattgtactttactgtgaaccactaacacctaagttaatccattcatattcttcttc 600  Q
    |||||||||||||||||  ||||||||| |||||||||||||||||||||||||   ||| ||||||| |||||||||    
T  14714715 accgttgaatcatgtagagtctattgtattttactgtgaaccactaacacctaataaaattcattcatcttcttcttc 14714792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 318 - 403
Target Start/End: Original strand, 25569787 - 25569872
Alignment:
Q  318 ttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgtttt 403  Q
    ||||||||||||||||||| |||||| ||||||||||||||  ||||||||||| |||  |||||||||   ||||||||||||||    
T  25569787 ttaacttattttatttttttagtttggtcccttaactattacttgtgtcaatttggtcacataagtcttcctccgtttattgtttt 25569872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 314 - 447
Target Start/End: Original strand, 32614399 - 32614532
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 413  Q
    ||||||| ||||||||||||||||| |||| |||| ||||||| | |||| |||||||||| | |||| ||||||| ||||||   |||||||| ||||     
T  32614399 tcccttagcttattttattttttcattttggtcccctaactatcacgtgtttcaatttagttccataactcttatgtcgtttaccattttagtcctctcc 32614498  T
Q  414 gttagttttgaacatcaaatatctaaggtgaacc 447  Q
    ||| ||||| ||| | | || |||||||||||||    
T  32614499 gtttgtttttaaccttatatgtctaaggtgaacc 32614532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 542 - 726
Target Start/End: Original strand, 14714902 - 14715095
Alignment:
Q  542 tctattgtactttactgtgaaccactaacacctaagttaatccattcatattcttcttc-----ttccctcgtcatcttgaacaacaacttcatcaataa 636  Q
    ||||||||| |||||||||||||||||||||||||   ||| ||||||| |||||||||     | || || | | ||| ||||||||||||||||||||    
T  14714902 tctattgtattttactgtgaaccactaacacctaataaaattcattcatcttcttcttccctcatcccttcatgaacttcaacaacaacttcatcaataa 14715001  T
Q  637 aatctagaaaatcccaaa--actaataat--taaacctactatttaatcaccacacaaccatcattatcatcgtcatctataatcattaacacc 726  Q
    |||| | ||||||| |||  | |||  ||  || || |||| ||||||||||| |||||||||||| ||||| | |||||| ||||| ||||||    
T  14715002 aatccaaaaaatcctaaatgaataaatattatacacatactctttaatcaccagacaaccatcattgtcatctttatctatcatcatcaacacc 14715095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 289 - 376
Target Start/End: Original strand, 15850101 - 15850188
Alignment:
Q  289 ttttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcc 376  Q
    |||||||||||||| ||||   |  |||||||||||||||||||||||||||||| || ||||||||| |||||| ||||||| ||||    
T  15850101 ttttttggcttaatgcatcccccggtcccttaacttattttattttttcagtttggtctcttaactataaagtgtctcaatttggtcc 15850188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 314 - 465
Target Start/End: Complemental strand, 37869142 - 37868991
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 413  Q
    ||||||||||||||||   |||||| |||| |||||||||||| |||||| |||||||||||  ||||||||| || ||||||   |||| ||| ||||     
T  37869142 tcccttaacttatttttgattttcaatttggtcccttaactataaagtgtctcaatttagtctcataagtcttctgtcgtttacctttttggtcttctcc 37869043  T
Q  414 gttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtcca 465  Q
    ||| ||||| ||| | |||| |||||||||| |||  |||| || |||||||    
T  37869042 gtttgtttttaaccttaaatgtctaaggtgagccaactttataggtggtcca 37868991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 415 - 477
Target Start/End: Original strand, 4512221 - 4512283
Alignment:
Q  415 ttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcatatgcctta 477  Q
    |||||||| ||||||||||||||||||||||||||||| |||  ||||||| |||||||||||    
T  4512221 ttagtttttaacatcaaatatctaaggtgaaccatattaaaaagtggtccaccatatgcctta 4512283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 523 - 576
Target Start/End: Original strand, 23177897 - 23177950
Alignment:
Q  523 accgttgaatcatgtaggatctattgtactttactgtgaaccactaacacctaa 576  Q
    |||||||||| |||| || |||||||||||||||||||||||||||||||||||    
T  23177897 accgttgaattatgtcgggtctattgtactttactgtgaaccactaacacctaa 23177950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 523 - 576
Target Start/End: Original strand, 23589154 - 23589207
Alignment:
Q  523 accgttgaatcatgtaggatctattgtactttactgtgaaccactaacacctaa 576  Q
    |||||||||| |||| || |||||||||||||||||||||||||||||||||||    
T  23589154 accgttgaattatgtcgggtctattgtactttactgtgaaccactaacacctaa 23589207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 409 - 477
Target Start/End: Original strand, 26205122 - 26205190
Alignment:
Q  409 tctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcatatgcctta 477  Q
    |||| ||||||||| |||||||||| |||||||||||||||| |||||  ||||||| |||||||||||    
T  26205122 tctccgttagtttttaacatcaaatgtctaaggtgaaccatacttaaaagtggtccaccatatgcctta 26205190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 295 - 470
Target Start/End: Original strand, 4829460 - 4829635
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 394  Q
    ||||||||||||| ||   | ||||||||||||||   |||||| |||  |||||||||||| || ||| |||||||  ||  |||| ||||||| ||||    
T  4829460 ggcttaatacatcatttgattccttaacttatttttcgttttcactttagtcccttaactataaaatgtctcaatttgatctcataaatcttatgtcgtt 4829559  T
Q  395 tattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcata 470  Q
    || | |||| ||| ||||||||||| || ||| | ||||||||||||| |||||  |||| || ||||||| ||||    
T  4829560 tactattttggtcctctctgttagtgtttaaccttaaatatctaaggtaaaccaactttataggtggtccaccata 4829635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 295 - 445
Target Start/End: Original strand, 7036961 - 7037111
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 394  Q
    ||||||||||||| ||   ||| ||||||||||||    ||||| |||  |||||||||||| |||||| ||||||| |||| ||||||||| |||||||    
T  7036961 ggcttaatacatcatttggtcctttaacttatttttggatttcactttagtcccttaactataaagtgtttcaatttggtcccataagtcttctgccgtt 7037060  T
Q  395 tattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaa 445  Q
    ||   |||| ||||| || |||  |||| ||| | ||||||||||||||||    
T  7037061 taccattttggtcatttccgtttatttttaaccttaaatatctaaggtgaa 7037111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 523 - 610
Target Start/End: Original strand, 4512329 - 4512413
Alignment:
Q  523 accgttgaatcatgtaggatctattgtactttactgtgaaccactaacacctaagttaatccattcatattcttcttcttccctcgtc 610  Q
    ||||||||||||||| || |||||| ||||||||||||||||| | ||||||||   |||| ||||||   |||||||||||||||||    
T  4512329 accgttgaatcatgtggggtctattatactttactgtgaaccattcacacctaataaaatcaattcat---cttcttcttccctcgtc 4512413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 523 - 576
Target Start/End: Complemental strand, 6708872 - 6708819
Alignment:
Q  523 accgttgaatcatgtaggatctattgtactttactgtgaaccactaacacctaa 576  Q
    |||||||||| ||||||| ||||||| ||||| |||||||||||||||||||||    
T  6708872 accgttgaattatgtagggtctattgcactttcctgtgaaccactaacacctaa 6708819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 292 - 376
Target Start/End: Original strand, 37867748 - 37867832
Alignment:
Q  292 tttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcc 376  Q
    |||||||||||||||| ||   ||||||||||||||||   |||||| ||||||||| ||||||| |||||| ||||||| ||||    
T  37867748 tttggcttaatacatcatttggtcccttaacttatttttggttttcaatttgatcccctaactataaagtgtctcaatttggtcc 37867832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 314 - 377
Target Start/End: Complemental strand, 33553467 - 33553404
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcct 377  Q
    ||||||||||||||||| |||||||||||| || ||||||||||||  || ||||||| |||||    
T  33553467 tcccttaacttattttaatttttcagtttggtctcttaactattaaacgtttcaatttggtcct 33553404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 297 - 376
Target Start/End: Complemental strand, 41796071 - 41795992
Alignment:
Q  297 cttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcc 376  Q
    ||||||||||| || | ||||||||||||||||   |||||| ||||||||| ||||||| |||||| ||||||| ||||    
T  41796071 cttaatacatcatttagtcccttaacttatttttgattttcattttgatcccctaactataaagtgtctcaatttggtcc 41795992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 316 - 446
Target Start/End: Complemental strand, 7490295 - 7490165
Alignment:
Q  316 ccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctctgt 415  Q
    ||||||||||||||||||| |||||||| ||| |||| ||| || ||| ||||||| |||| |||| |||| |   ||||| | |||| ||| | || ||    
T  7490295 ccttaacttattttattttctcagtttggtcctttaattataaaatgtctcaatttggtcccataaatcttttattgtttactattttggtcttatccgt 7490196  T
Q  416 tagttttgaacatcaaatatctaaggtgaac 446  Q
    ||||||| ||| | |||| ||||||||||||    
T  7490195 tagtttttaaccttaaatgtctaaggtgaac 7490165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 319 - 396
Target Start/End: Original strand, 2581822 - 2581899
Alignment:
Q  319 taacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgttta 396  Q
    |||||||||||   |||||| ||||||||| ||||||| |||||| ||||||| |||| |||| ||||| ||||||||    
T  2581822 taacttatttttggttttcaatttgatcccctaactataaagtgtctcaatttggtcccataaatcttacgccgttta 2581899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 316 - 465
Target Start/End: Complemental strand, 12959805 - 12959656
Alignment:
Q  316 ccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctctgt 415  Q
    ||||||||||||||   |||| | |||| ||||||||| || |||||| |||||||||||| |||| |||| |||||||||   ||||  || |||| ||    
T  12959805 ccttaacttatttttgatttttaatttggtcccttaacaataaagtgtctcaatttagtccgataaatcttctgccgtttacctttttgatcctctccgt 12959706  T
Q  416 tagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtcca 465  Q
    | || || ||| | |||| ||||||||||||||  |||| || |||||||    
T  12959705 ttgtctttaaccttaaatgtctaaggtgaaccaactttataggtggtcca 12959656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 531 - 576
Target Start/End: Complemental strand, 41296339 - 41296294
Alignment:
Q  531 atcatgtaggatctattgtactttactgtgaaccactaacacctaa 576  Q
    |||||||||||||||||||| |||| |||||| |||||||||||||    
T  41296339 atcatgtaggatctattgtattttagtgtgaatcactaacacctaa 41296294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 289 - 377
Target Start/End: Original strand, 42596549 - 42596637
Alignment:
Q  289 ttttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcct 377  Q
    ||||||||||||||||||| ||   ||||||||||||||||  ||||| | |||| |||| ||||||||||  || ||||||| |||||    
T  42596549 ttttttggcttaatacatcatttggtcccttaacttattttcgttttttattttggtcccctaactattaaacgtctcaatttggtcct 42596637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 405 - 465
Target Start/End: Original strand, 45047447 - 45047507
Alignment:
Q  405 gtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtcca 465  Q
    ||||| || |||| |||| || ||||||| ||||||||||||||||||||||| |||||||    
T  45047447 gtcatttccgttaatttttaatatcaaatgtctaaggtgaaccatatttaaaggtggtcca 45047507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 314 - 377
Target Start/End: Complemental strand, 20630773 - 20630710
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcct 377  Q
    ||||| ||||||||||| ||| ||||||| ||||||||||||||||  || ||||||| |||||    
T  20630773 tccctaaacttattttaatttctcagtttaatcccttaactattaaacgtttcaatttggtcct 20630710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 400 - 463
Target Start/End: Complemental strand, 21010514 - 21010451
Alignment:
Q  400 ttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtc 463  Q
    |||| ||| |||||||||||| | |||||||||| ||||| ||||||| ||||||||| |||||    
T  21010514 ttttggtcctctctgttagttgttaacatcaaatgtctaatgtgaaccgtatttaaaggtggtc 21010451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 295 - 381
Target Start/End: Complemental strand, 7038453 - 7038367
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataa 381  Q
    ||||||||||||| ||   ||||||||||||||||    ||||| |||| |||||||||||| |||||| ||||||| |||| ||||    
T  7038453 ggcttaatacatcatttggtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataa 7038367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 293 - 355
Target Start/End: Complemental strand, 8538748 - 8538686
Alignment:
Q  293 ttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaacta 355  Q
    |||||||||||||||   |  ||||||||||||||||||||| |||||||| || ||||||||    
T  8538748 ttggcttaatacatcaaccggtcccttaacttattttattttctcagtttggtctcttaacta 8538686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 314 - 376
Target Start/End: Complemental strand, 35801147 - 35801085
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcc 376  Q
    ||||||||||| |||| | |||||| ||| ||||||||||||| |||||| ||||||| ||||    
T  35801147 tcccttaacttgttttctattttcattttcatcccttaactataaagtgtttcaatttggtcc 35801085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 531 - 573
Target Start/End: Original strand, 45047625 - 45047667
Alignment:
Q  531 atcatgtaggatctattgtactttactgtgaaccactaacacc 573  Q
    |||||||||||||||||||  ||||||||||||||||| ||||    
T  45047625 atcatgtaggatctattgtgttttactgtgaaccactatcacc 45047667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 527 - 576
Target Start/End: Original strand, 12853113 - 12853162
Alignment:
Q  527 ttgaatcatgtaggatctattgtactttactgtgaaccactaacacctaa 576  Q
    |||||| ||||||  ||||||||||||| |||| ||||||||||||||||    
T  12853113 ttgaattatgtagagtctattgtactttcctgtcaaccactaacacctaa 12853162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 293 - 386
Target Start/End: Complemental strand, 12854227 - 12854134
Alignment:
Q  293 ttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtctt 386  Q
    ||||||||||||||  ||   ||||||||||||||||    ||||| |||| |||||||||||| |||||| ||||||| |||| |||| ||||    
T  12854227 ttggcttaatacatgctttggtcccttaacttatttttagatttcattttggtcccttaactataaagtgtctcaatttggtcccataaatctt 12854134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 314 - 371
Target Start/End: Complemental strand, 15850761 - 15850704
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaattt 371  Q
    ||||||||||||||||||||| | |||||| ||| |||||||| || ||| |||||||    
T  15850761 tcccttaacttattttattttcttagtttgctcctttaactataaaatgtttcaattt 15850704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 85; Significance: 4e-40; HSPs: 74)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 314 - 470
Target Start/End: Complemental strand, 41522790 - 41522634
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 413  Q
    ||||||||||||||||||||| ||||||| |||  ||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||| | ||     
T  41522790 tcccttaacttattttattttctcagtttaatcatttaactattaagtgtgtcaatttggtcctataagtcttctgccgtttactgttttagtcctttcc 41522691  T
Q  414 gttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcata 470  Q
    || | |||| |||||||||||| |||| |||||||| ||||||  ||||||||||||    
T  41522690 gtcaatttttaacatcaaatatttaagatgaaccatgtttaaaagtggtccagcata 41522634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 526 - 754
Target Start/End: Complemental strand, 39325723 - 39325493
Alignment:
Q  526 gttgaatcatgtaggatctattgtactttactgtgaaccactaacacctaagttaatccattcatattcttcttcttccctcgtcatcttgaacaacaac 625  Q
    |||| |||||||| || ||||||||||||||||||||||| ||||||||||   |||| |||||| ||||||||| ||  || || || ||| |  ||||    
T  39325723 gttggatcatgtacgacctattgtactttactgtgaaccattaacacctaataaaatctattcatcttcttcttcatca-tc-tcttcatgatcttcaac 39325626  T
Q  626 ttcatcaataaaatctagaaaatcccaaaact----aataattaaacctactatttaatcaccacacaaccatcattatcatcgtcatctataatcatta 721  Q
     |||||||||||||  ||||||||||||||      |||||||||||||||  |||||||||||||||||||||||| ||||| |||||||| ||||| |    
T  39325625 atcatcaataaaattcagaaaatcccaaaaaataaaaataattaaacctaccttttaatcaccacacaaccatcattgtcatcttcatctatcatcatca 39325526  T
Q  722 acaccattcttcttaaatattattcttcatctt 754  Q
    ||||| |||||| ||||||||||||||||||||    
T  39325525 acacccttcttcctaaatattattcttcatctt 39325493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 296 - 462
Target Start/End: Complemental strand, 37276363 - 37276197
Alignment:
Q  296 gcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgttt 395  Q
    |||||||||||| ||   |||||||| |||||||   |||||| ||||||||||||||||| |||||| ||||||| |||| |||| |||| ||||||||    
T  37276363 gcttaatacatcatttggtcccttaatttatttttgattttcactttgatcccttaactataaagtgtctcaatttggtcccataaatcttttgccgttt 37276264  T
Q  396 attgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggt 462  Q
    ||| | || ||| |||||||||||||| |||||||||  ||||||||||||||||||||||| ||||    
T  37276263 attatattggtcctctctgttagtttttaacatcaaaagtctaaggtgaaccatatttaaaggtggt 37276197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 523 - 735
Target Start/End: Complemental strand, 44103187 - 44102965
Alignment:
Q  523 accgttgaatcatgtaggatctattgtactttactgtgaaccactaacacctaagttaatccattcatattcttct----tcttc-cctcgtcatcttga 617  Q
    ||||||||||||||| || |||||||||||||| ||||||||||| ||||||||   ||||||||||| |||||||    || || | || | ||||| |    
T  44103187 accgttgaatcatgtggggtctattgtactttattgtgaaccactcacacctaataaaatccattcatcttcttctcccctcatctcttcatgatcttca 44103088  T
Q  618 acaacaacttcatcaataaaatctagaaaatcccaaa-----actaataattaaacctactatttaatcaccacacaaccatcattatcatcgtcatcta 712  Q
    ||||||| ||||||||||||||| |||||||||||||     |  ||||||||  |||||| |||||||| |||| |||||||||| ||||| |||||||    
T  44103087 acaacaaattcatcaataaaatccagaaaatcccaaaaaaataaaaataattattcctactctttaatcatcacataaccatcattgtcatcttcatcta 44102988  T
Q  713 taatcattaacaccattcttctt 735  Q
    | ||||| |||||| | ||||||    
T  44102987 tcatcatcaacaccctccttctt 44102965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 314 - 470
Target Start/End: Complemental strand, 2421395 - 2421239
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 413  Q
    ||||||||||||||||| ||| |||||||  |||||||| |||||||||| ||||||| |||| | || |||| ||||||||||| |||| ||| ||| |    
T  2421395 tcccttaacttattttaatttatcagtttagtcccttaaatattaagtgtttcaatttggtcccagaaatcttctgccgtttattattttggtcctcttt 2421296  T
Q  414 gttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcata 470  Q
    ||||||||| ||| | |||| ||||||||||||||  |||| |||||||||| ||||    
T  2421295 gttagtttttaaccttaaatgtctaaggtgaaccaactttatagatggtccatcata 2421239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 290 - 465
Target Start/End: Complemental strand, 39546803 - 39546628
Alignment:
Q  290 tttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatg 389  Q
    |||||||||||||||||| ||   | |||||||||||||| | |||||| |||| | || ||||| | |||||| ||||||| |||| |||| | |||||    
T  39546803 tttttggcttaatacatccttttgttccttaacttattttctgttttcactttggttccctaactttaaagtgtctcaatttggtcccataaatattatg 39546704  T
Q  390 ccgtttattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtcca 465  Q
    |||||||  ||||| |||||||| ||||||||| |||||||||| | |||| |||||||| ||||||| |||||||    
T  39546703 ccgtttaccgttttggtcatctccgttagtttttaacatcaaatgtttaagatgaaccatgtttaaaggtggtcca 39546628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 316 - 470
Target Start/End: Complemental strand, 13367150 - 13366996
Alignment:
Q  316 ccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctctgt 415  Q
    ||||||||||||||||||||||| |||| |||||||||||| |||||| | ||||| |||| |||| |||| ||||||||| | |||| ||| |||| ||    
T  13367150 ccttaacttattttattttttcactttggtcccttaactataaagtgttttaatttggtcccataaatcttctgccgtttactattttggtcctctccgt 13367051  T
Q  416 tagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcata 470  Q
    ||||||| ||| | |||| ||||||||||||||  |||| || ||||||| ||||    
T  13367050 tagtttttaaccttaaatgtctaaggtgaaccaactttataggtggtccaccata 13366996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 292 - 386
Target Start/End: Complemental strand, 22621258 - 22621164
Alignment:
Q  292 tttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtctt 386  Q
    ||||||||||||||||  ||  ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||| |||||||||    
T  22621258 tttggcttaatacatccctcggtcccttaacttattttattttctcagtttgatcccttaactattaagtgtggcaatttggtcccataagtctt 22621164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 295 - 477
Target Start/End: Original strand, 36756059 - 36756241
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 394  Q
    ||||||||||||| ||   ||||||||||||||||   |||| | |||| |||| ||||||| |||||| ||||| | |||  |||| ||||||| ||||    
T  36756059 ggcttaatacatcatttggtcccttaacttatttttagtttttaatttggtcccataactataaagtgtttcaatctggtcacataaatcttatgtcgtt 36756158  T
Q  395 tattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcatatgcctta 477  Q
    || | |||| |||||||| ||||||||| |||||||||| ||||||||||| ||||||||||| |||| || |||| ||||||    
T  36756159 tactattttggtcatctccgttagtttttaacatcaaatttctaaggtgaatcatatttaaaggtggttcaccataagcctta 36756241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 292 - 481
Target Start/End: Original strand, 117040 - 117229
Alignment:
Q  292 tttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgcc 391  Q
    |||| ||||||||||| ||   ||||||||||||||||   |||||| |||| |||| ||| ||| || ||| |||||||  ||| |||| |||| || |    
T  117040 tttgccttaatacatcgtttgatcccttaacttatttttggttttcattttggtcccctaattataaaatgtttcaatttgatcccataaatcttctgtc 117139  T
Q  392 gtttattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcatatgccttactaa 481  Q
    |||||||||||| ||| |||| ||||||||| |||||||||| ||||||||||  ||| ||||||| ||||||| ||||  |||||||||    
T  117140 gtttattgttttggtcctctccgttagtttttaacatcaaatgtctaaggtgagtcatgtttaaaggtggtccaccatagaccttactaa 117229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 314 - 448
Target Start/End: Original strand, 8095360 - 8095494
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 413  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||| |||| || | |||| || |||||| | |||| ||| | ||     
T  8095360 tcccttaacttattttattttctcagtttggtcccttaactattaagtgtctcaatttggtcccattactcttttgtcgtttactattttggtcctttcc 8095459  T
Q  414 gttagttttgaacatcaaatatctaaggtgaacca 448  Q
    ||||||||| ||  | |||| ||||||||||||||    
T  8095460 gttagtttttaatcttaaatgtctaaggtgaacca 8095494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 286 - 371
Target Start/End: Original strand, 41521303 - 41521388
Alignment:
Q  286 taattttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaattt 371  Q
    |||||||| ||||||||||||||     ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  41521303 taatttttaggcttaatacatctcctgatcccttaacttattttattttttcagtttgatcccttaactataaagtgtgttaattt 41521388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 314 - 386
Target Start/End: Original strand, 22619909 - 22619981
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtctt 386  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||| |||| ||||    
T  22619909 tcccttaacttattttattttctcagtttgatcccttaacttttaagtgtgtcaatttggtcccataaatctt 22619981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 333 - 456
Target Start/End: Original strand, 7486110 - 7486233
Alignment:
Q  333 ttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctctgttagttttgaacatcaaa 432  Q
    |||||| ||||||||||||||||| |||||  ||||||| |||| |||| |||| ||| ||||| | |||| ||| |||| ||||||||| |||||||||    
T  7486110 ttttcattttgatcccttaactataaagtgcttcaatttggtcccataaatcttttgctgtttactattttggtcctctccgttagtttttaacatcaaa 7486209  T
Q  433 tatctaaggtgaaccatatttaaa 456  Q
    | ||||| ||||||||| ||||||    
T  7486210 tgtctaaagtgaaccatgtttaaa 7486233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 400 - 481
Target Start/End: Complemental strand, 39325850 - 39325769
Alignment:
Q  400 ttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcatatgccttactaa 481  Q
    ||||||||||||||| ||||||| |||||||||| |||||||||||| || ||||||| ||||| | |||||||||||||||    
T  39325850 ttttagtcatctctgctagtttttaacatcaaatgtctaaggtgaactatgtttaaaggtggtctatcatatgccttactaa 39325769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 314 - 470
Target Start/End: Original strand, 19913506 - 19913662
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 413  Q
    ||||||||||||||||    ||||| |||| |||  ||||||| |||||| ||||||| |||| ||||||||| ||| ||||||  |||| ||| ||||     
T  19913506 tcccttaacttatttttgaatttcaatttggtcctctaactataaagtgtttcaatttggtcccataagtcttctgcggtttatcattttggtcctctcc 19913605  T
Q  414 gttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcata 470  Q
    ||||||||| ||| | |||| ||||||||||||||  |||| |||||||||| ||||    
T  19913606 gttagtttttaaccttaaatttctaaggtgaaccaactttatagatggtccaccata 19913662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 289 - 477
Target Start/End: Complemental strand, 44103423 - 44103235
Alignment:
Q  289 ttttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttat 388  Q
    |||||||||| |||||||| || | |||||||||||| ||  |||||| ||  ||||||| ||||||  ||  || |||| || |||   || ||||| |    
T  44103423 ttttttggctcaatacatcgtttagtcccttaacttaattcttttttttagaatgatcccctaactaaaaaacgtctcaaattggtctcttatgtcttct 44103324  T
Q  389 gccgtttattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcatatgcctta 477  Q
     ||||||  | |||| ||| |||| ||||||||| |||||||||| ||||||||||||||| ||||||| ||||||| |||||||||||    
T  44103323 tccgtttcctcttttggtcctctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccatatgcctta 44103235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 295 - 377
Target Start/End: Original strand, 16346094 - 16346176
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcct 377  Q
    |||||||||||||| ||| ||||||||||||||||| ||| |||||||| |||||||||||||||  || ||||||| |||||    
T  16346094 ggcttaatacatctctcagtcccttaacttattttaatttctcagtttggtcccttaactattaaacgtttcaatttggtcct 16346176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 295 - 417
Target Start/End: Original strand, 31623901 - 31624023
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 394  Q
    ||||||||||||| ||   ||||||||||||||||   |||||| |||| |||| ||||||| |||||| ||||||| |||| |||| ||||||| ||||    
T  31623901 ggcttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtttcaatttggtcccataaatcttatgtcgtt 31624000  T
Q  395 tattgttttagtcatctctgtta 417  Q
    |||| |||||||| |||| ||||    
T  31624001 tattattttagtcctctccgtta 31624023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 295 - 448
Target Start/End: Original strand, 35943902 - 35944056
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaag-tgtgtcaatttagtcctataagtcttatgccgt 393  Q
    ||||||||||||| ||   ||||||||||||||||   |||||| |||| |||||||| ||| ||  ||| ||||||| |||| |||| |||||||| ||    
T  35943902 ggcttaatacatcgtttggtcccttaacttatttttggttttcattttggtcccttaattataaaaatgtctcaatttggtcccataaatcttatgcagt 35944001  T
Q  394 ttattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaacca 448  Q
    ||| | |||| |||||||| ||||||||| ||| | |||| ||||||||||||||    
T  35944002 ttactattttggtcatctccgttagtttttaactttaaatgtctaaggtgaacca 35944056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 400 - 477
Target Start/End: Original strand, 21670164 - 21670241
Alignment:
Q  400 ttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcatatgcctta 477  Q
    |||| ||| |||| ||||||||| ||||||||||||||||||||||||||||| |||  ||||||| |||||||||||    
T  21670164 ttttggtcttctccgttagtttttaacatcaaatatctaaggtgaaccatattaaaaagtggtccaccatatgcctta 21670241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 400 - 481
Target Start/End: Original strand, 21961923 - 21962004
Alignment:
Q  400 ttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcatatgccttactaa 481  Q
    |||| ||| |||| ||||||||| |||||||||| ||| ||||||||||| ||||||| ||||||| |||||||||||||||    
T  21961923 ttttggtcctctccgttagtttttaacatcaaatgtcttaggtgaaccatgtttaaaggtggtccaccatatgccttactaa 21962004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 317 - 445
Target Start/End: Original strand, 39220696 - 39220824
Alignment:
Q  317 cttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaattt-agtcctataagtcttatgccgtttattgttttagtcatctctgt 415  Q
    |||||||||||||| ||| ||| |||| ||  ||||||||||||||| ||||||| | |||| |||||||| ||||||||| | |||| || ||||||||    
T  39220696 cttaacttattttaatttctcattttggtctattaactattaagtgtttcaatttgattcct-taagtcttctgccgtttactattttcgttatctctgt 39220794  T
Q  416 tagttttgaacatcaaatatctaaggtgaa 445  Q
    ||||||| ||| | |||| |||||||||||    
T  39220795 tagtttttaaccttaaatgtctaaggtgaa 39220824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 314 - 419
Target Start/End: Original strand, 41866908 - 41867013
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 413  Q
    ||||||||||||||||   |||||| ||||||||||||||||| |||||| ||||||| |||| |||| | ||| ||| |||| | |||| |||||||||    
T  41866908 tcccttaacttatttttgattttcactttgatcccttaactataaagtgtttcaatttggtcccataaattttacgccatttactattttggtcatctct 41867007  T
Q  414 gttagt 419  Q
    ||||||    
T  41867008 gttagt 41867013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 279 - 355
Target Start/End: Original strand, 2419853 - 2419929
Alignment:
Q  279 acaataataattttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaacta 355  Q
    |||||| |||||||||||||||||||||||  |  |||||||| |||||||| ||| ||||||||||||||||||||    
T  2419853 acaatattaattttttggcttaatacatctcccggtcccttaatttattttaatttctcagtttgatcccttaacta 2419929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 314 - 386
Target Start/End: Original strand, 34616143 - 34616215
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtctt 386  Q
    ||||||||||||||||||||| ||||||||||| ||||||||| |||||| ||||||| |||| |||| ||||    
T  34616143 tcccttaacttattttattttctcagtttgatctcttaactataaagtgtctcaatttggtcccataaatctt 34616215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 314 - 422
Target Start/End: Complemental strand, 34617297 - 34617189
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 413  Q
    ||||||||||| |||| ||||  ||||||||||| |||||||||||||||||||||||||||| |||  |||| | ||||||||  |||| ||||| ||     
T  34617297 tcccttaacttttttttttttcccagtttgatccattaactattaagtgtgtcaatttagtcccatagctcttcttccgtttatcattttggtcatttcc 34617198  T
Q  414 gttagtttt 422  Q
    || ||||||    
T  34617197 gtcagtttt 34617189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 378 - 462
Target Start/End: Original strand, 36938759 - 36938843
Alignment:
Q  378 ataagtcttatgccgtttattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggt 462  Q
    |||| |||| ||||||||| | |||| ||| ||||||||| |||| |||||||||||||||| ||||||||||||||||| ||||    
T  36938759 ataaatcttctgccgtttactattttggtcttctctgttaatttttaacatcaaatatctaaagtgaaccatatttaaaggtggt 36938843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 292 - 396
Target Start/End: Complemental strand, 38591131 - 38591027
Alignment:
Q  292 tttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgcc 391  Q
    |||||||||||||||| ||   ||||||||||||||||   |||||| |||| |||| ||||||| |||||| ||||||| |||| |||| |||||||||    
T  38591131 tttggcttaatacatcatttggtcccttaacttatttttgattttcaatttggtcccctaactataaagtgtctcaatttggtcccataaatcttatgcc 38591032  T
Q  392 gttta 396  Q
    |||||    
T  38591031 gttta 38591027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 295 - 403
Target Start/End: Original strand, 43275745 - 43275853
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 394  Q
    ||||||||||||| ||   || ||||||||||||| | |||||| |||| | || ||||||| |||||| |||||||||||| |||| ||||||||||||    
T  43275745 ggcttaatacatcatttggtctcttaacttattttttgttttcaatttggttccctaactataaagtgtctcaatttagtcccataactcttatgccgtt 43275844  T
Q  395 tattgtttt 403  Q
    |||| ||||    
T  43275845 tattatttt 43275853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 287 - 377
Target Start/End: Original strand, 4534021 - 4534111
Alignment:
Q  287 aattttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcct 377  Q
    ||||||| |||||||||||||  ||| ||||||||||||||||| ||| |||||||| ||| |||| |||||| ||| ||||||| |||||    
T  4534021 aatttttaggcttaatacatccctcagtcccttaacttattttaatttctcagtttggtcctttaaatattaaatgtttcaatttggtcct 4534111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 314 - 396
Target Start/End: Complemental strand, 24069548 - 24069466
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgttta 396  Q
    ||||||||||||||||   |||||| ||||||||||||||||| |||||| ||||||| |||| |||| |||| |||||||||    
T  24069548 tcccttaacttatttttggttttcattttgatcccttaactataaagtgtctcaatttggtcccataactcttctgccgttta 24069466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 293 - 419
Target Start/End: Complemental strand, 41868039 - 41867913
Alignment:
Q  293 ttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccg 392  Q
    ||||||||||||||| ||   |||||||| |||||||   |||||| |||| |||| ||||||| |||||| ||||||| |||| |||| | ||||||||    
T  41868039 ttggcttaatacatcatttggtcccttaatttatttttagttttcactttggtcccctaactataaagtgtctcaatttggtcccataaattttatgccg 41867940  T
Q  393 tttattgttttagtcatctctgttagt 419  Q
    ||| || |||||||| |||| ||||||    
T  41867939 ttttttattttagtcctctccgttagt 41867913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 295 - 396
Target Start/End: Original strand, 29738286 - 29738387
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 394  Q
    ||||||||||||| ||   |||||||||||||||| | |||||| |||| ||  |||||||| |||||| |||||||||||  ||||||||| |||||||    
T  29738286 ggcttaatacatcgtttggtcccttaacttattttttattttcaatttggtctattaactataaagtgtctcaatttagtctcataagtcttctgccgtt 29738385  T
Q  395 ta 396  Q
    ||    
T  29738386 ta 29738387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 317 - 448
Target Start/End: Original strand, 20308622 - 20308753
Alignment:
Q  317 cttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctctgtt 416  Q
    |||||||||||||||||| |||||||  |  |||||||||||||||| ||||||| |||  |||| |||| || |||||| | |||| ||||| ||  ||    
T  20308622 cttaacttattttattttctcagtttagtatcttaactattaagtgtctcaatttggtctcataactcttctgtcgtttactattttggtcatttccatt 20308721  T
Q  417 agttttgaacatcaaatatctaaggtgaacca 448  Q
    | |||| ||| | |||| ||||||||||||||    
T  20308722 aatttttaaccttaaatgtctaaggtgaacca 20308753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 317 - 448
Target Start/End: Original strand, 21095255 - 21095386
Alignment:
Q  317 cttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctctgtt 416  Q
    |||||||||||||||||| |||||||  |  |||||||||||||||| ||||||| |||  |||| |||| || |||||| | |||| ||||| ||  ||    
T  21095255 cttaacttattttattttctcagtttagtatcttaactattaagtgtctcaatttggtctcataactcttctgtcgtttactattttggtcatttccatt 21095354  T
Q  417 agttttgaacatcaaatatctaaggtgaacca 448  Q
    | |||| ||| | |||| ||||||||||||||    
T  21095355 aatttttaaccttaaatgtctaaggtgaacca 21095386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 287 - 354
Target Start/End: Original strand, 35462654 - 35462721
Alignment:
Q  287 aattttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaact 354  Q
    ||||||| |||||||||||||| |   ||| ||||||||||||||||| |||||||||||||||||||    
T  35462654 aatttttaggcttaatacatctgttggtcctttaacttattttattttctcagtttgatcccttaact 35462721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 296 - 422
Target Start/End: Complemental strand, 36940153 - 36940027
Alignment:
Q  296 gcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgttt 395  Q
    |||||||||||| ||   ||||||||||||||||   |||||| ||||||||| ||||||| |||||| ||||||| ||   |||| |||| ||||||||    
T  36940153 gcttaatacatcatttggtcccttaacttatttttggttttcactttgatcccctaactataaagtgtttcaatttggtatcataaatcttctgccgttt 36940054  T
Q  396 attgttttagtcatctctgttagtttt 422  Q
    | | |||| |||||||| |||| ||||    
T  36940053 actattttggtcatctccgttaatttt 36940027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 314 - 396
Target Start/End: Original strand, 45194497 - 45194579
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgttta 396  Q
    |||||||| |||||||| ||||| |||||| ||| ||||||||||||||| | ||||||||  ||||| |||| |||||||||    
T  45194497 tcccttaatttattttaattttttagtttggtcctttaactattaagtgttttaatttagtgttataaatcttttgccgttta 45194579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 314 - 376
Target Start/End: Complemental strand, 45195906 - 45195844
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcc 376  Q
    ||||||||||||||||| ||| |||||||| |||||||| ||| |||||| ||||||||||||    
T  45195906 tcccttaacttattttaatttctcagtttggtcccttaaatataaagtgtctcaatttagtcc 45195844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 293 - 470
Target Start/End: Original strand, 10052097 - 10052274
Alignment:
Q  293 ttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccg 392  Q
    ||||||||||| ||| ||   |||||||||||||| |   |||||| |||| |||| ||| ||| |||||| |||| || ||||  || ||| | |||||    
T  10052097 ttggcttaatatatcatttggtcccttaacttattcttgattttcactttggtcccctaattataaagtgtctcaaattggtcccttatgtcatctgccg 10052196  T
Q  393 tttattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcata 470  Q
    ||   | |||| ||||||||  |||||||| ||||| |||| |||||| |||||||||||||||| ||||||| ||||    
T  10052197 ttacctcttttggtcatctcctttagtttttaacattaaatgtctaagatgaaccatatttaaaggtggtccaccata 10052274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 314 - 359
Target Start/End: Complemental strand, 22914292 - 22914247
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaa 359  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||    
T  22914292 tcccttaacttattttaatttttcagtttgatccattaactattaa 22914247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 292 - 377
Target Start/End: Complemental strand, 35463113 - 35463028
Alignment:
Q  292 tttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcct 377  Q
    ||||||||||||||||  |   ||| ||||||||||||||||| ||||||||||||||||||||| || ||| |||| || |||||    
T  35463113 tttggcttaatacatccgttggtcctttaacttattttattttctcagtttgatcccttaactataaaatgtctcaaattggtcct 35463028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 285 - 470
Target Start/End: Original strand, 36070163 - 36070348
Alignment:
Q  285 ataattttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtc 384  Q
    ||||||| | ||||||||||||| ||   |||||||| |||||||   |||||| |||| |||| ||||||| |||||| |||||||  ||| |||| ||    
T  36070163 ataatttataggcttaatacatcatttgatcccttaatttatttttggttttcaatttggtcccctaactataaagtgtctcaatttgatcccataaatc 36070262  T
Q  385 ttatgccgtttattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcata 470  Q
    || ||||||||| | |||| ||| || | |||||| ||  || | |||| ||||||||||||||  |||| || ||||||| ||||    
T  36070263 ttctgccgtttactattttggtcctccccgttagtctttgaccttaaatgtctaaggtgaaccaactttataggtggtccaccata 36070348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 295 - 420
Target Start/End: Complemental strand, 36071499 - 36071374
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 394  Q
    ||||||||||||| || | || |||||||||| || | |||||| |||| ||||||||||||  ||| | |||| || |||| |||| |||| | |||||    
T  36071499 ggcttaatacatcatttagtctcttaacttatattttgttttcaatttggtcccttaactatagagtatttcaaattggtcccataactcttctaccgtt 36071400  T
Q  395 tattgttttagtcatctctgttagtt 420  Q
    |||  |||| ||||||||||||||||    
T  36071399 tatcattttggtcatctctgttagtt 36071374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 295 - 371
Target Start/End: Original strand, 22913187 - 22913263
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaattt 371  Q
    ||||||||||||| |||  | ||||||||||||||| ||| |||||| ||||||||||||| ||| ||| |||||||    
T  22913187 ggcttaatacatccttcgattccttaacttattttaatttctcagttggatcccttaactagtaaatgtttcaattt 22913263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 295 - 394
Target Start/End: Complemental strand, 10053865 - 10053766
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 394  Q
    ||||||||||||| || | ||||||||||||||||   |||||| |||| |||||||||||| |||||| |||| || ||||  || |||||||| ||||    
T  10053865 ggcttaatacatcatttagtcccttaacttatttttggttttcactttggtcccttaactataaagtgtctcaagttggtcccttatgtcttatgtcgtt 10053766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 314 - 360
Target Start/End: Complemental strand, 8096647 - 8096601
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaag 360  Q
    |||||||||||||||||||||||||||||  || |||||||||||||    
T  8096647 tcccttaacttattttattttttcagtttagtctcttaactattaag 8096601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 526 - 576
Target Start/End: Original strand, 10052330 - 10052380
Alignment:
Q  526 gttgaatcatgtaggatctattgtactttactgtgaaccactaacacctaa 576  Q
    |||| |||||||||| ||||||||| ||||||||||||||||| |||||||    
T  10052330 gttggatcatgtagggtctattgtattttactgtgaaccactaccacctaa 10052380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 523 - 573
Target Start/End: Original strand, 13513643 - 13513693
Alignment:
Q  523 accgttgaatcatgtaggatctattgtactttactgtgaaccactaacacc 573  Q
    |||||||||||||||  | |||||||||||||||||||||||||| |||||    
T  13513643 accgttgaatcatgtgaggtctattgtactttactgtgaaccactcacacc 13513693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 523 - 573
Target Start/End: Original strand, 13603176 - 13603226
Alignment:
Q  523 accgttgaatcatgtaggatctattgtactttactgtgaaccactaacacc 573  Q
    |||||||||||||||  | |||||||||||||||||||||||||| |||||    
T  13603176 accgttgaatcatgtgaggtctattgtactttactgtgaaccactcacacc 13603226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 297 - 359
Target Start/End: Complemental strand, 23768604 - 23768542
Alignment:
Q  297 cttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaa 359  Q
    ||||||||||| | |  ||||||||||||||||| |||||||||||| |||||| ||||||||    
T  23768604 cttaatacatcctccggtcccttaacttattttagtttttcagtttggtcccttcactattaa 23768542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 542 - 576
Target Start/End: Complemental strand, 37276100 - 37276066
Alignment:
Q  542 tctattgtactttactgtgaaccactaacacctaa 576  Q
    |||||||||||||||||||||||||||||||||||    
T  37276100 tctattgtactttactgtgaaccactaacacctaa 37276066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 316 - 377
Target Start/End: Complemental strand, 9190542 - 9190481
Alignment:
Q  316 ccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcct 377  Q
    ||||||||||||||| ||| |||||||  ||||||||||||||| ||| ||||||| |||||    
T  9190542 ccttaacttattttaatttctcagtttagtcccttaactattaaatgtttcaatttggtcct 9190481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 314 - 359
Target Start/End: Original strand, 12818768 - 12818813
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaa 359  Q
    ||||||||||||||||| ||| |||||||| |||||||||||||||    
T  12818768 tcccttaacttattttaatttctcagtttggtcccttaactattaa 12818813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 293 - 377
Target Start/End: Complemental strand, 37474159 - 37474075
Alignment:
Q  293 ttggcttaatacatc-tttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcct 377  Q
    ||||||||||||||| ||||| |||||||||||||||    |||||| |||| |||||||||||| |||||| ||||||| |||||    
T  37474159 ttggcttaatacatcatttca-tcccttaacttatttatggttttcaatttggtcccttaactataaagtgtctcaatttggtcct 37474075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 289 - 377
Target Start/End: Original strand, 9189383 - 9189471
Alignment:
Q  289 ttttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcct 377  Q
    |||||| |||||||||||| | |  |||||||| |||||||| ||| ||||| || |||||||||||||||  || ||||||| |||||    
T  9189383 tttttttgcttaatacatcctccggtcccttaatttattttaatttctcagtgtggtcccttaactattaaacgtttcaatttggtcct 9189471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 314 - 398
Target Start/End: Original strand, 14820207 - 14820291
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttatt 398  Q
    ||||||||||||||||    ||| | |||| |||| ||||||| |||||| |||||||||||| |||| ||||||| ||||||||    
T  14820207 tcccttaacttatttttggattttaatttggtcccctaactataaagtgtctcaatttagtcccataaatcttatgtcgtttatt 14820291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 314 - 386
Target Start/End: Original strand, 24068344 - 24068416
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtctt 386  Q
    ||||||||||||||||   |||||| |||| |||| ||||||| |||||| ||||||| |||| |||||||||    
T  24068344 tcccttaacttatttttggttttcattttggtcccctaactataaagtgtctcaatttggtcccataagtctt 24068416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 525 - 576
Target Start/End: Original strand, 36756289 - 36756341
Alignment:
Q  525 cgttgaatcatgtaggatcta-ttgtactttactgtgaaccactaacacctaa 576  Q
    ||||| |||||||||| |||| ||||| |||||||||||||||||||||||||    
T  36756289 cgttggatcatgtagggtctaattgtattttactgtgaaccactaacacctaa 36756341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 542 - 597
Target Start/End: Original strand, 21962065 - 21962120
Alignment:
Q  542 tctattgtactttactgtgaaccactaacacctaagttaatccattcatattcttc 597  Q
    |||||||||||||||||||||||||||||| || |   ||||||||||| ||||||    
T  21962065 tctattgtactttactgtgaaccactaacatctgataaaatccattcatcttcttc 21962120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 314 - 409
Target Start/End: Complemental strand, 43278023 - 43277928
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcat 409  Q
    |||||||||||||||| | |||| | |||| |||| ||||||| || ||| ||||||| ||||  ||| |||||||||||||| | |||| |||||    
T  43278023 tcccttaacttattttttatttttaatttggtcccctaactataaaatgtctcaatttggtcccgtaaatcttatgccgtttactattttggtcat 43277928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 518 - 569
Target Start/End: Original strand, 45541697 - 45541748
Alignment:
Q  518 aaataaccgttgaatcatgtaggatctattgtactttactgtgaaccactaa 569  Q
    |||| ||| |||||| ||||||| |||||||||||||||||| |||||||||    
T  45541697 aaatgaccattgaattatgtagggtctattgtactttactgtaaaccactaa 45541748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 316 - 394
Target Start/End: Complemental strand, 7770997 - 7770919
Alignment:
Q  316 ccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 394  Q
    |||||||||||||| | |||||| |||||||   ||||||| |||||| ||||||| |||  |||| ||||||||||||    
T  7770997 ccttaacttattttttattttcattttgatcatctaactataaagtgtttcaatttggtctcataactcttatgccgtt 7770919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 526 - 576
Target Start/End: Complemental strand, 13363468 - 13363418
Alignment:
Q  526 gttgaatcatgtaggatctattgtactttactgtgaaccactaacacctaa 576  Q
    |||| |||||||||| ||||||||| |||  ||||||||||||||||||||    
T  13363468 gttggatcatgtagggtctattgtatttttgtgtgaaccactaacacctaa 13363418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 400 - 462
Target Start/End: Complemental strand, 13363594 - 13363532
Alignment:
Q  400 ttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggt 462  Q
    |||| ||| |||| ||||||||| |||| ||||| ||||| ||||||||||||||||| ||||    
T  13363594 ttttggtcctctccgttagtttttaacaccaaatgtctaaagtgaaccatatttaaaggtggt 13363532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 409 - 471
Target Start/End: Original strand, 21267241 - 21267303
Alignment:
Q  409 tctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcatat 471  Q
    |||| ||||||||| |||||||||||||||||||| |||||  || ||| ||||||| |||||    
T  21267241 tctccgttagtttttaacatcaaatatctaaggtggaccatgattcaaggtggtccaccatat 21267303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 316 - 422
Target Start/End: Original strand, 38789066 - 38789172
Alignment:
Q  316 ccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctctgt 415  Q
    |||||||||||||| |||||||| |||  || | |||| |||||  || |||||||  |||||||| |||||||| ||||||| ||||  |||||||  |    
T  38789066 ccttaacttattttcttttttcattttagtctcgtaacaattaaacgtctcaatttgatcctataaatcttatgcagtttattattttgatcatctccat 38789165  T
Q  416 tagtttt 422  Q
    |||||||    
T  38789166 tagtttt 38789172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 526 - 576
Target Start/End: Complemental strand, 39546567 - 39546517
Alignment:
Q  526 gttgaatcatgtaggatctattgtactttactgtgaaccactaacacctaa 576  Q
    |||| ||||||| |||||||||||| ||||| ||||||||| |||||||||    
T  39546567 gttggatcatgtgggatctattgtattttaccgtgaaccacaaacacctaa 39546517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 400 - 477
Target Start/End: Original strand, 13513520 - 13513597
Alignment:
Q  400 ttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcatatgcctta 477  Q
    |||| ||| |||| ||||| ||| |||||||||| | |||| |||||||||||||||  ||||||| ||||| |||||    
T  13513520 ttttggtcctctccgttagcttttaacatcaaatgtataagatgaaccatatttaaaagtggtccaccatatacctta 13513597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 400 - 477
Target Start/End: Original strand, 13603053 - 13603130
Alignment:
Q  400 ttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcatatgcctta 477  Q
    |||| ||| |||| ||||| ||| |||||||||| | |||| |||||||||||||||  ||||||| ||||| |||||    
T  13603053 ttttggtcctctccgttagcttttaacatcaaatgtataagatgaaccatatttaaaagtggtccaccatatacctta 13603130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 316 - 417
Target Start/End: Complemental strand, 31625484 - 31625383
Alignment:
Q  316 ccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctctgt 415  Q
    ||||||||||||||   |||||| |||| |||| ||| ||| |||||| ||||||| |||| |||| |||| ||||||||| | |||| ||| |||| ||    
T  31625484 ccttaacttatttttggttttcaatttggtcccctaattataaagtgtctcaatttggtcccataaatcttttgccgtttactattttggtcctctccgt 31625385  T
Q  416 ta 417  Q
    ||    
T  31625384 ta 31625383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 295 - 396
Target Start/End: Original strand, 38589816 - 38589916
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 394  Q
    ||||||||||||| ||   |||||||||||||||| | |||||| |||| |||  ||||||| |||||  ||||||| |||| |||| ||||||| ||||    
T  38589816 ggcttaatacatcatttggtcccttaacttatttt-tgttttcaatttggtcctctaactataaagtggctcaatttggtcccataaatcttatgtcgtt 38589914  T
Q  395 ta 396  Q
    ||    
T  38589915 ta 38589916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 333 - 470
Target Start/End: Original strand, 44606172 - 44606309
Alignment:
Q  333 ttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctctgttagttttgaacatcaaa 432  Q
    |||||| |||| |||| |||||||  ||||| ||||||| |||| |||| |||| | | ||||||| ||||  || ||||  |||||||| ||| | |||    
T  44606172 ttttcactttggtcccctaactatatagtgtttcaatttggtcccataaatcttcttctgtttattattttgatcctctccattagtttttaaccttaaa 44606271  T
Q  433 tatctaaggtgaaccatatttaaagatggtccagcata 470  Q
    | ||||||||||||||  |||| || ||||||| ||||    
T  44606272 tgtctaaggtgaaccaactttataggtggtccaccata 44606309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 77; Significance: 2e-35; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 292 - 448
Target Start/End: Complemental strand, 12831062 - 12830906
Alignment:
Q  292 tttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgcc 391  Q
    ||||||||||||||||| ||  ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||| |||| |||     
T  12831062 tttggcttaatacatctctcggtcccttaacttattttattttctcagtttgatcccttaactattaagtgtctcaatttggtcctataactcttctgct 12830963  T
Q  392 gtttattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaacca 448  Q
    ||||| | |||| ||| |||| |||| |||| |||   |||||||| ||||||||||    
T  12830962 gtttactattttggtcctctccgttaatttttaaccctaaatatcttaggtgaacca 12830906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 292 - 448
Target Start/End: Complemental strand, 12863042 - 12862886
Alignment:
Q  292 tttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgcc 391  Q
    ||||||||||||||||| ||  || |||||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||| |||| |||     
T  12863042 tttggcttaatacatctctcggtctcttaacttattttattttctcagtttgatcccttaactattaagtgtctcaatttggtcctataactcttctgct 12862943  T
Q  392 gtttattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaacca 448  Q
    ||||| | |||| ||| |||| |||| |||| |||   |||||||| ||||||||||    
T  12862942 gtttactattttggtcctctccgttaatttttaaccctaaatatcttaggtgaacca 12862886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 314 - 386
Target Start/End: Complemental strand, 8188302 - 8188230
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtctt 386  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  8188302 tcccttaacttattttattttttcagtttgatcctttaactattaagtgtgtcaatttggtcctataagtctt 8188230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 314 - 470
Target Start/End: Original strand, 7426655 - 7426811
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 413  Q
    |||||||| |||||||||||| | ||||| ||||||||| |||||||||||||||| | || | ||||||||  |||| |||| ||||||| || | ||     
T  7426655 tcccttaatttattttattttcttagtttaatcccttaattattaagtgtgtcaatatggttccataagtctactgccatttactgttttattcctttcc 7426754  T
Q  414 gttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcata 470  Q
    || | |||| |||||||||| ||||||||||| ||||||||||| ||||||| ||||    
T  7426755 gtcaatttttaacatcaaatgtctaaggtgaatcatatttaaaggtggtccaccata 7426811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 293 - 419
Target Start/End: Complemental strand, 32735602 - 32735476
Alignment:
Q  293 ttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccg 392  Q
    ||||||||||||||| | |  ||||||||| ||||||||||| ||| ||||||||||||| |||||| ||| | ||||| |||| |||| |||| |||||    
T  32735602 ttggcttaatacatcctccgatcccttaacatattttattttctcaatttgatcccttaattattaaatgttttaatttggtcccataactcttctgccg 32735503  T
Q  393 tttattgttttagtcatctctgttagt 419  Q
    |||||| |||| |||||||||||||||    
T  32735502 tttattattttggtcatctctgttagt 32735476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 314 - 443
Target Start/End: Original strand, 42510128 - 42510257
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 413  Q
    |||||||| ||||||||||||||||||||| |||||||||||| |||||| ||||||| |||| |||| |||| ||||||||| | |||| ||  ||||     
T  42510128 tcccttaatttattttattttttcagtttggtcccttaactataaagtgtctcaatttggtcccataaatcttctgccgtttactattttggttctctcc 42510227  T
Q  414 gttagttttgaacatcaaatatctaaggtg 443  Q
    ||||||||| ||| |||||| |||| ||||    
T  42510228 gttagtttttaacctcaaatgtctatggtg 42510257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 315 - 396
Target Start/End: Complemental strand, 22819650 - 22819569
Alignment:
Q  315 cccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgttta 396  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||| |||| |||| |||| |||||||||    
T  22819650 cccttaacttattttattttctcaatttgatcccttaactattaagtgtctcaatttggtcccataactcttctgccgttta 22819569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 314 - 422
Target Start/End: Complemental strand, 15857720 - 15857612
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 413  Q
    ||||||||||||||||||||| |||||||| |||||||||||| |||||| |||||||  ||| |||| ||||||| ||||||   |||| ||||||||     
T  15857720 tcccttaacttattttattttctcagtttggtcccttaactataaagtgtttcaatttgttcccataaatcttatgtcgtttaccattttggtcatctcc 15857621  T
Q  414 gttagtttt 422  Q
    |||||||||    
T  15857620 gttagtttt 15857612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 318 - 446
Target Start/End: Original strand, 32734150 - 32734277
Alignment:
Q  318 ttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctctgtta 417  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||| | ||||| |||| |||| |||| || |||||| | |||| ||||| || ||||    
T  32734150 ttaacttattttattttttcagtttggtcccttaactatt-agtgtcttaatttggtcccataactcttctgtcgtttactattttggtcatttccgtta 32734248  T
Q  418 gttttgaacatcaaatatctaaggtgaac 446  Q
    ||||| ||  | |||||||||||||||||    
T  32734249 gtttttaatcttaaatatctaaggtgaac 32734277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 354 - 470
Target Start/End: Complemental strand, 2167576 - 2167461
Alignment:
Q  354 tattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatattt 453  Q
    |||||||||| ||||||| |||| |||| |||| ||||||||||| |||| ||| |||||||||||||| ||| | |||| ||||||||||||||  |||    
T  2167576 tattaagtgtttcaatttggtcccataaatcttctgccgtttattattttggtc-tctctgttagtttttaaccttaaatgtctaaggtgaaccaacttt 2167478  T
Q  454 aaagatggtccagcata 470  Q
    | |||||||||| ||||    
T  2167477 atagatggtccaccata 2167461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 282 - 377
Target Start/End: Complemental strand, 11907295 - 11907200
Alignment:
Q  282 ataataattttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcct 377  Q
    ||||| ||||||||||||||||||||   |  ||||||||||||||||| ||| |||||||| ||||||||||||||| ||| ||||||| |||||    
T  11907295 ataattattttttggcttaatacatcccccggtcccttaacttattttaatttctcagtttggtcccttaactattaaatgtttcaatttggtcct 11907200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 317 - 448
Target Start/End: Original strand, 40058035 - 40058166
Alignment:
Q  317 cttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctctgtt 416  Q
    |||||||||||||   |||||| |||||||||||||||||||||||| |||| || |||  |||| |||| |||||||||   |||| |||||||| |||    
T  40058035 cttaacttatttttggttttcattttgatcccttaactattaagtgtttcaaattggtctcataactcttctgccgtttaccattttggtcatctccgtt 40058134  T
Q  417 agttttgaacatcaaatatctaaggtgaacca 448  Q
    |||||| ||  | |||| ||||||||||||||    
T  40058135 agtttttaatcttaaatgtctaaggtgaacca 40058166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 295 - 396
Target Start/End: Complemental strand, 12936223 - 12936122
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 394  Q
    ||||||||||||| || | ||||||||||||||||   |||||| |||| |||| ||||||| |||||| ||||||| |||| ||||||||||||| |||    
T  12936223 ggcttaatacatcatttagtcccttaacttatttttggttttcattttggtcccctaactataaagtgtctcaatttggtccaataagtcttatgctgtt 12936124  T
Q  395 ta 396  Q
    ||    
T  12936123 ta 12936122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 314 - 462
Target Start/End: Original strand, 21387651 - 21387799
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 413  Q
    ||||||||||||||||    ||||| |||| |||| ||||||| || ||| ||||||| |||| |||| |||| |||||||   | |||| ||| | |||    
T  21387651 tcccttaacttatttttgaatttcattttggtcccctaactataaaatgtctcaatttggtcccataaatcttctgccgttacctcttttggtcctgtct 21387750  T
Q  414 gttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggt 462  Q
    ||||||||| |||||||||  ||||||||||| ||||||||||| ||||    
T  21387751 gttagtttttaacatcaaaactctaaggtgaaacatatttaaaggtggt 21387799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 295 - 417
Target Start/End: Original strand, 1663182 - 1663304
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 394  Q
    ||||||||||||| || | ||||||||||||||||    ||||| |||||||| |||||||| |||||| | ||||| ||||||||| |||| |||||||    
T  1663182 ggcttaatacatcatttagtcccttaacttatttttggatttcactttgatccattaactataaagtgtcttaatttggtcctataaatcttctgccgtt 1663281  T
Q  395 tattgttttagtcatctctgtta 417  Q
    || | |||| ||| |||| ||||    
T  1663282 tactattttggtcttctccgtta 1663304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 314 - 371
Target Start/End: Complemental strand, 42511768 - 42511711
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaattt 371  Q
    |||||||| ||||||||||||||||||||| |||||||||||| |||||| |||||||    
T  42511768 tcccttaatttattttattttttcagtttggtcccttaactataaagtgtctcaattt 42511711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 314 - 462
Target Start/End: Original strand, 18693712 - 18693860
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 413  Q
    ||||||||||||||||    ||| | |||| |||||||||||| || ||| ||||| | |||| |||| |||| || ||||   | |||| ||| |||||    
T  18693712 tcccttaacttatttttgaattttattttggtcccttaactataaaatgtctcaatctggtcccataaatcttctgtcgttacctcttttggtcctctct 18693811  T
Q  414 gttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggt 462  Q
    ||||||||| |||||||||  ||||||||||||||||| ||||| ||||    
T  18693812 gttagtttttaacatcaaaactctaaggtgaaccatatataaaggtggt 18693860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 314 - 386
Target Start/End: Original strand, 30253600 - 30253672
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtctt 386  Q
    |||| |||||| ||||||||||||||| || ||||| ||||||||||||||||||||| |||  |||||||||    
T  30253600 tcccctaacttgttttattttttcagtgtggtccctcaactattaagtgtgtcaatttggtctcataagtctt 30253672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 295 - 389
Target Start/End: Complemental strand, 12950381 - 12950287
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatg 389  Q
    ||||||||||||| || | |||||||||||||||    |||||| |||| |||| ||||||| |||||| ||||||| |||| ||||||||||||    
T  12950381 ggcttaatacatcatttagtcccttaacttatttatggttttcattttggtcccctaactataaagtgtctcaatttggtccaataagtcttatg 12950287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 295 - 456
Target Start/End: Complemental strand, 7345511 - 7345350
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 394  Q
    |||||||||||| |||   ||||||||||||||||    ||||| |||| |||  ||||||| |||||| ||||||| |||| |||| | || || ||||    
T  7345511 ggcttaatacatgttttgatcccttaacttatttttgaatttcattttggtcctctaactataaagtgtctcaatttggtcccataaatattttgtcgtt 7345412  T
Q  395 tattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaa 456  Q
       | |||| ||| ||| || ||||||| |||||||||  ||||||||||||||||||||||    
T  7345411 atctcttttggtcctctatgatagtttttaacatcaaaactctaaggtgaaccatatttaaa 7345350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 314 - 375
Target Start/End: Original strand, 8187180 - 8187240
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtc 375  Q
    |||||||| |||||||||||| ||||||| |||| ||||||||||| |||||||||||||||    
T  8187180 tcccttaatttattttattttctcagtttaatcc-ttaactattaaatgtgtcaatttagtc 8187240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 314 - 355
Target Start/End: Original strand, 12829584 - 12829625
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaacta 355  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  12829584 tcccttaacttattttattttttcagtttggtcccttaacta 12829625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 295 - 396
Target Start/End: Original strand, 18677971 - 18678072
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 394  Q
    ||||||||||||| ||   ||||||||||||||||   |||||| ||||||||| ||||||| |||||| ||||||| |||| |||| |||| || ||||    
T  18677971 ggcttaatacatcatttggtcccttaacttatttttggttttcactttgatcccctaactataaagtgtctcaatttggtcccataaatcttctgtcgtt 18678070  T
Q  395 ta 396  Q
    ||    
T  18678071 ta 18678072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 295 - 448
Target Start/End: Complemental strand, 19525409 - 19525256
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 394  Q
    ||||||||||||| ||   ||||||||||||||||   |||||| |||| |||| ||||||| |||||| || |||| |||  ||||||||| |||||||    
T  19525409 ggcttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctccatttggtcacataagtcttctgccgtt 19525310  T
Q  395 tattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaacca 448  Q
    ||   |||| ||| |||| ||| ||||| ||| | |||| |||| |||||||||    
T  19525309 taccattttggtcctctccgtttgtttttaaccttaaatttctatggtgaacca 19525256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 523 - 576
Target Start/End: Original strand, 21387860 - 21387913
Alignment:
Q  523 accgttgaatcatgtaggatctattgtactttactgtgaaccactaacacctaa 576  Q
    |||||||||| ||||||| |||||||||||||||||| ||| ||||||||||||    
T  21387860 accgttgaattatgtagggtctattgtactttactgtaaacgactaacacctaa 21387913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 314 - 386
Target Start/End: Complemental strand, 224692 - 224620
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtctt 386  Q
    |||||||||||||||||| |||||| |||| |||| ||||||| |||||| ||||||| |||  |||||||||    
T  224692 tcccttaacttattttatgttttcattttggtcccctaactataaagtgtctcaatttggtctcataagtctt 224620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 295 - 347
Target Start/End: Complemental strand, 7428045 - 7427993
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcc 347  Q
    ||||||||||||||  |  ||||||||||||||||||||||||||||||||||    
T  7428045 ggcttaatacatctcccgatcccttaacttattttattttttcagtttgatcc 7427993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 287 - 371
Target Start/End: Complemental strand, 24761849 - 24761766
Alignment:
Q  287 aattttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaattt 371  Q
    ||||||||| |||||||||||  | | ||||||||||||||||||||| | |||||  |||||||| |||||||||| |||||||    
T  24761849 aattttttgacttaatacatccct-agtcccttaacttattttattttcttagtttagtcccttaattattaagtgtctcaattt 24761766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 314 - 422
Target Start/End: Complemental strand, 40059430 - 40059322
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 413  Q
    ||||||||||||||||   |||||| ||||||||| |||||||||||||| | || || |||| |||| |||| ||||||||||  |||| || |||||     
T  40059430 tcccttaacttatttttggttttcattttgatcccctaactattaagtgttttaaattggtccaataactcttctgccgtttatcattttggtgatctcc 40059331  T
Q  414 gttagtttt 422  Q
    |||| ||||    
T  40059330 gttaatttt 40059322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 297 - 396
Target Start/End: Original strand, 12933748 - 12933847
Alignment:
Q  297 cttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgttta 396  Q
    ||||||| ||| || | ||||||||||||||||   |||||| ||||||||| ||||||| |||||| |||||||  ||  ||||||||| |||||||||    
T  12933748 cttaatatatcatttagtcccttaacttatttttggttttcattttgatcccctaactataaagtgtctcaatttgatctcataagtcttctgccgttta 12933847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 297 - 396
Target Start/End: Original strand, 12947909 - 12948008
Alignment:
Q  297 cttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgttta 396  Q
    ||||||| ||| || | ||||||||||||||||   |||||| ||||||||| ||||||| |||||| |||||||  ||  |||||||||||| ||||||    
T  12947909 cttaatatatcatttagtcccttaacttatttttgattttcattttgatcccctaactataaagtgtctcaatttgatctcataagtcttatgtcgttta 12948008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 295 - 374
Target Start/End: Original strand, 23679142 - 23679221
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagt 374  Q
    ||||||||||||| | |  ||||| || |||||||| |||||||||||| |||||||||||||||  || ||||||||||    
T  23679142 ggcttaatacatcctccggtccctaaatttattttaatttttcagtttggtcccttaactattaaacgtttcaatttagt 23679221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 295 - 374
Target Start/End: Complemental strand, 23855670 - 23855591
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagt 374  Q
    ||||||||||||| | |  ||||| || |||||||| |||||||||||| |||||||||||||||  || ||||||||||    
T  23855670 ggcttaatacatcctccggtccctaaatttattttaatttttcagtttggtcccttaactattaaacgtttcaatttagt 23855591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 293 - 371
Target Start/End: Complemental strand, 39135771 - 39135693
Alignment:
Q  293 ttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaattt 371  Q
    ||||||||||| ||| | |  ||| ||||||||||||| ||| |||||||| ||||||||||||||| ||| |||||||    
T  39135771 ttggcttaatagatcctccggtcctttaacttattttaatttctcagtttgctcccttaactattaaatgtttcaattt 39135693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 314 - 355
Target Start/End: Original strand, 12861563 - 12861604
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaacta 355  Q
    ||||||||||||||||||||| |||||||| |||||||||||    
T  12861563 tcccttaacttattttattttctcagtttggtcccttaacta 12861604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 290 - 371
Target Start/End: Original strand, 19523973 - 19524054
Alignment:
Q  290 tttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaattt 371  Q
    |||||||||||||| ||| ||   ||||||||||||||||   |||||| |||| |||||||||||| |||||| |||||||    
T  19523973 tttttggcttaatatatcatttggtcccttaacttatttttggttttcaatttggtcccttaactataaagtgtctcaattt 19524054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 314 - 421
Target Start/End: Complemental strand, 15510365 - 15510258
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 413  Q
    ||||||||||||||||    ||||| ||||||||| ||||||| |||||| ||||||| ||||  || ||||| |||||||   | |||| ||| |||||    
T  15510365 tcccttaacttattttcggatttcattttgatcccctaactataaagtgtctcaatttggtcccttatgtcttctgccgttacctcttttggtcctctct 15510266  T
Q  414 gttagttt 421  Q
    ||||||||    
T  15510265 gttagttt 15510258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 314 - 377
Target Start/End: Original strand, 24070419 - 24070482
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcct 377  Q
    |||||||| |||||||| ||| ||||| ||||||||||||||||||  || ||||||| |||||    
T  24070419 tcccttaatttattttaatttctcagtgtgatcccttaactattaaacgtttcaatttggtcct 24070482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 314 - 377
Target Start/End: Complemental strand, 24071545 - 24071482
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcct 377  Q
    ||||||||||||||||| |||||||||||  | |||||| |||||| ||| ||||||| |||||    
T  24071545 tcccttaacttattttaatttttcagtttagttccttaattattaaatgtttcaatttggtcct 24071482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 294 - 396
Target Start/End: Complemental strand, 19827262 - 19827160
Alignment:
Q  294 tggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgt 393  Q
    |||||||||||||| || | || |||||||||||||   |||||| |||| |||| ||| ||| |||||| ||||||| |||| |||| |||| | ||||    
T  19827262 tggcttaatacatcatttagtctcttaacttatttttggttttcaatttggtcccataattataaagtgtctcaatttggtcccataaatcttcttccgt 19827163  T
Q  394 tta 396  Q
    |||    
T  19827162 tta 19827160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 295 - 417
Target Start/End: Original strand, 26403302 - 26403424
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 394  Q
    ||||||||||||| |  | ||| ||||||||||||   |||||| |||| |||||||||||| |||||| |||||||  ||  |||| | ||||| ||||    
T  26403302 ggcttaatacatcatatagtcctttaacttatttttgattttcaatttggtcccttaactataaagtgtctcaatttgatctcataaattttatgtcgtt 26403401  T
Q  395 tattgttttagtcatctctgtta 417  Q
    || | |||| ||| |||||||||    
T  26403402 tactattttggtcttctctgtta 26403424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 314 - 356
Target Start/End: Original strand, 29906130 - 29906172
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactat 356  Q
    |||||||||||||||| || ||||| |||||||||||||||||    
T  29906130 tcccttaacttatttttttgtttcattttgatcccttaactat 29906172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 359
Target Start/End: Complemental strand, 30916245 - 30916175
Alignment:
Q  289 ttttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaa 359  Q
    ||||| ||||||||||||| ||   |||||||||||||||||| |||||| |||  |||| ||||||||||    
T  30916245 tttttaggcttaatacatcatttggtcccttaacttattttatgttttcaatttagtcccctaactattaa 30916175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 110 - 156
Target Start/End: Original strand, 38617662 - 38617708
Alignment:
Q  110 aatgatgatttttaatatattgcaaactcagagaaatcaagaaccaa 156  Q
    ||||||||||||||| ||| ||||||||||||| ||| |||||||||    
T  38617662 aatgatgatttttaagataatgcaaactcagaggaattaagaaccaa 38617708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 314 - 383
Target Start/End: Original strand, 21006154 - 21006223
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagt 383  Q
    |||||||||||||||| | || ||| |||  |||||||||| |||| ||||||||||| ||||| |||||    
T  21006154 tcccttaacttattttttcttctcactttagtcccttaacttttaaatgtgtcaatttggtcctgtaagt 21006223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 314 - 355
Target Start/End: Original strand, 22818174 - 22818215
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaacta 355  Q
    |||||||||||||||| ||| |||||||||||| ||||||||    
T  22818174 tcccttaacttattttgtttgttcagtttgatctcttaacta 22818215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 314 - 359
Target Start/End: Original strand, 39134681 - 39134726
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaa 359  Q
    |||||||||||||||||  || |||||||| |||||||||||||||    
T  39134681 tcccttaacttattttaaattctcagtttggtcccttaactattaa 39134726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1974 (Bit Score: 76; Significance: 1e-34; HSPs: 2)
Name: scaffold1974
Description:

Target: scaffold1974; HSP #1
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 295 - 462
Target Start/End: Complemental strand, 749 - 582
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 394  Q
    ||||||||||||| ||   |||||||||||||||| | || ||| |||| |||| ||||||| |||||| |||||||||||| |||| |||| |||||||    
T  749 ggcttaatacatcatttggtcccttaacttattttttgttatcactttggtcccctaactataaagtgtctcaatttagtcccataaatcttctgccgtt 650  T
Q  395 tattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggt 462  Q
    ||   |||| |||||||| ||||||||| ||||| ||| |||||||||||||||||||||||||||||    
T  649 taccattttggtcatctccgttagtttttaacataaaaaatctaaggtgaaccatatttaaagatggt 582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1974; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 522 - 576
Target Start/End: Complemental strand, 522 - 468
Alignment:
Q  522 aaccgttgaatcatgtaggatctattgtactttactgtgaaccactaacacctaa 576  Q
    ||||||||||| |||| || |||||| |||||||||||||| || ||||||||||    
T  522 aaccgttgaattatgtcgggtctattatactttactgtgaatcattaacacctaa 468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1878 (Bit Score: 76; Significance: 1e-34; HSPs: 2)
Name: scaffold1878
Description:

Target: scaffold1878; HSP #1
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 295 - 462
Target Start/End: Original strand, 525 - 692
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 394  Q
    ||||||||||||| ||   |||||||||||||||| | || ||| |||| |||| ||||||| |||||| |||||||||||| |||| |||| |||||||    
T  525 ggcttaatacatcatttggtcccttaacttattttttgttatcactttggtcccctaactataaagtgtctcaatttagtcccataaatcttctgccgtt 624  T
Q  395 tattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggt 462  Q
    ||   |||| |||||||| ||||||||| ||||| ||| |||||||||||||||||||||||||||||    
T  625 taccattttggtcatctccgttagtttttaacataaaaaatctaaggtgaaccatatttaaagatggt 692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1878; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 522 - 576
Target Start/End: Original strand, 752 - 806
Alignment:
Q  522 aaccgttgaatcatgtaggatctattgtactttactgtgaaccactaacacctaa 576  Q
    ||||||||||| |||| || |||||| |||||||||||||| || ||||||||||    
T  752 aaccgttgaattatgtcgggtctattatactttactgtgaatcattaacacctaa 806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 76; Significance: 1e-34; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 295 - 462
Target Start/End: Complemental strand, 9599 - 9432
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 394  Q
    ||||||||||||| ||   |||||||||||||||| | || ||| |||| |||| ||||||| |||||| |||||||||||| |||| |||| |||||||    
T  9599 ggcttaatacatcatttggtcccttaacttattttttgttatcactttggtcccctaactataaagtgtctcaatttagtcccataaatcttctgccgtt 9500  T
Q  395 tattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggt 462  Q
    ||   |||| |||||||| ||||||||| ||||| ||| |||||||||||||||||||||||||||||    
T  9499 taccattttggtcatctccgttagtttttaacataaaaaatctaaggtgaaccatatttaaagatggt 9432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 6e-30; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 294 - 481
Target Start/End: Complemental strand, 17350224 - 17350037
Alignment:
Q  294 tggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgt 393  Q
    |||||||||||||| ||   ||||||||||||||||   |||||| |||| |||| ||||||| |||||| ||||||| ||||  || ||||| | | ||    
T  17350224 tggcttaatacatcatttggtcccttaacttatttttggttttcaatttgttcccctaactataaagtgtctcaatttggtcccttatgtcttctcctgt 17350125  T
Q  394 ttattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcatatgccttactaa 481  Q
    |   | |||| ||| |||| ||||||||| |||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||    
T  17350124 tacctcttttggtcctctccgttagtttttaacatcaaatgtctaaggtgaaccatatttaaaggtggtccaccatatgccttactaa 17350037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 297 - 477
Target Start/End: Complemental strand, 12062503 - 12062323
Alignment:
Q  297 cttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgttta 396  Q
    ||||||||||| | |  |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||| || | |||| ||| |||||    
T  12062503 cttaatacatcctccggtcccttaacttattttattttttcagtttggtcccttaactattaagtgtctcaatttggtcccattactcttttgctgttta 12062404  T
Q  397 ttgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcatatgcctta 477  Q
     | |||| ||||| ||  |||||||| ||| | |||| ||||||||||||||  |||| || || |||| ||||| |||||    
T  12062403 ctattttggtcatttccattagtttttaaccttaaatgtctaaggtgaaccaactttataggtgatccaccatatacctta 12062323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 317 - 481
Target Start/End: Original strand, 39133034 - 39133198
Alignment:
Q  317 cttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctctgtt 416  Q
    |||||||||||||   |||||| |||| |||| ||||||| |||||| ||||||| ||||  || ||||| |  ||||   | |||| ||| ||||||||    
T  39133034 cttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctctcgttacctcttttggtcctctctgtt 39133133  T
Q  417 agttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcatatgccttactaa 481  Q
    |||||| |||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||    
T  39133134 agtttttaacatcaaatgtctaaggtgaaccatatttaaaggtggtccaccatatgccttactaa 39133198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 314 - 396
Target Start/End: Original strand, 21127939 - 21128021
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgttta 396  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||| |||| |||||||||    
T  21127939 tcccttaacttattttattttttcagtttgatctcttaactattaagtgtgtcaatttggtcccataactcttctgccgttta 21128021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 523 - 757
Target Start/End: Complemental strand, 17349995 - 17349746
Alignment:
Q  523 accgttgaatcatgtaggatctattgtactttactgtgaaccactaacacctaagttaatccattcatattcttcttcttccctcgtc-------atctt 615  Q
    |||||||||||||||||| ||||||| |||||| ||||||||||||||||||||   ||| ||||||   ||||||||||||||| ||       |||||    
T  17349995 accgttgaatcatgtagggtctattgaactttattgtgaaccactaacacctaataaaatacattca---tcttcttcttccctcatctcttcatatctt 17349899  T
Q  616 gaacaacaacttcatcaat-------aaaatctagaaaatcccaaa----actaataattaaacctactatttaatcaccacacaaccatcattatcatc 704  Q
     ||||| ||||||||||||       |||||| | |||||||||||    | ||| ||||||| ||||| |||||||||||||||||| ||||| | |||    
T  17349898 caacaataacttcatcaataaaacccaaaatccaaaaaatcccaaaaaataataacaattaaatctactctttaatcaccacacaaccgtcattgtgatc 17349799  T
Q  705 gtcatctataatcattaacaccattcttcttaaatattattcttcatcttcat 757  Q
     |||||||| ||  | |||||| |||||  ||||||||||||||||| |||||    
T  17349798 ttcatctatcattttcaacacccttctttctaaatattattcttcatattcat 17349746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 290 - 470
Target Start/End: Original strand, 53808308 - 53808488
Alignment:
Q  290 tttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatg 389  Q
    ||||| |||||||||||| ||   ||||||||||||||||   |||| | |||| || | ||||||| |||||| ||||| | |||| |||| |||||||    
T  53808308 ttttttgcttaatacatcatttggtcccttaacttattttcggttttgaatttggtctcctaactataaagtgtctcaatctggtcccataaatcttatg 53808407  T
Q  390 ccgtttattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcata 470  Q
     |||||| | |||| ||||||||  |||||||| |||||||||| ||||||||||| ||||| ||||| ||||||| ||||    
T  53808408 tcgtttactattttggtcatctccattagtttttaacatcaaatttctaaggtgaatcatatctaaaggtggtccaccata 53808488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 283 - 465
Target Start/End: Original strand, 8371203 - 8371385
Alignment:
Q  283 taataattttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataag 382  Q
    |||| |||||| ||||||||||||| ||   |||||||||||||||| | |||||| |||| |||| ||||||| || ||| ||||||| || | ||||     
T  8371203 taattatttttaggcttaatacatcatttgatcccttaacttattttttgttttcattttggtcccctaactataaaatgtctcaatttggttccataaa 8371302  T
Q  383 tcttatgccgtttattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtcca 465  Q
    |||| ||| ||||| | |||| ||| |||| ||||||||| |||||||||||||||| | ||||| || ||| || |||||||    
T  8371303 tcttctgcagtttactattttggtcctctccgttagtttttaacatcaaatatctaaagcgaaccgtacttagaggtggtcca 8371385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 295 - 477
Target Start/End: Original strand, 25583109 - 25583290
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 394  Q
    ||||||||||||| || | ||||||||||||||||   |||||| |||| |||| ||||||||||  || ||||||| |||| ||||||||| |||||||    
T  25583109 ggcttaatacatcatttagtcccttaacttatttttgattttcactttggtcccctaactattaaacgtctcaatttggtcccataagtcttctgccgtt 25583208  T
Q  395 tattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcatatgcctta 477  Q
    || | |||| ||| ||||||||| |||| ||| | |||| ||||||| |||| ||| |||||| || |||| |||| ||||||    
T  25583209 tactattttggtcctctctgttaatttttaaccttaaatgtctaaggcgaactata-ttaaaggtgctccaccataggcctta 25583290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 316 - 397
Target Start/End: Complemental strand, 43346547 - 43346466
Alignment:
Q  316 ccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttat 397  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||  |||| |||| || |||||||    
T  43346547 ccttaacttattttattttctcagtttgatcccttaactattaagtgtgtcaatttggtctcataactcttctgtcgtttat 43346466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 334 - 462
Target Start/End: Original strand, 11219464 - 11219592
Alignment:
Q  334 tttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctctgttagttttgaacatcaaat 433  Q
    ||||| |||| |||| ||||||| |||||| ||||||| |||  || |||||| ||||||||| | |||| |||||||| ||||| ||| |||||||||     
T  11219464 tttcattttggtcccctaactataaagtgtctcaatttggtctcatgagtcttctgccgtttactattttggtcatctccgttagattttaacatcaaaa 11219563  T
Q  434 atctaaggtgaaccatatttaaagatggt 462  Q
     ||||||||||||||||||||||| ||||    
T  11219564 ttctaaggtgaaccatatttaaaggtggt 11219592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 314 - 470
Target Start/End: Original strand, 23559833 - 23559989
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 413  Q
    ||||||||||||||||||||| |||||||| |||||||| |||||||||| |||||||  ||| |||| |||| || |||||| | |||| ||| ||||     
T  23559833 tcccttaacttattttattttctcagtttggtcccttaattattaagtgtctcaatttgatcccataattcttctgtcgtttactattttggtcctctcc 23559932  T
Q  414 gttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcata 470  Q
    ||||||||| ||| | || | |||||| |||||||  |||| || ||||||| ||||    
T  23559933 gttagtttttaaccttaattgtctaagatgaaccaactttataggtggtccaccata 23559989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 526 - 751
Target Start/End: Original strand, 39133243 - 39133483
Alignment:
Q  526 gttgaatcatgtaggatctattgtactttactgtgaaccactaacacctaagttaatccattcatattcttcttcttccctcgtc-------atcttgaa 618  Q
    ||||||||||||| | |||||||||||||| ||||||||||||||||||||   ||| || ||||   |||||||||||||| ||       ||||| ||    
T  39133243 gttgaatcatgtaaggtctattgtactttattgtgaaccactaacacctaataaaatacagtcat---cttcttcttccctcatctcttcatatcttcaa 39133339  T
Q  619 caacaacttcatcaataaaatcta-------gaaaatcccaaaac----taataattaaacctactatttaatcaccacacaaccatcattatcatcgtc 707  Q
    ||| |||||||||||||||| | |       |||||||||||||     ||| ||||||| |||||||||||||||||||||||||||||  ||||| ||    
T  39133340 caataacttcatcaataaaacccaaaacccagaaaatcccaaaaaataataacaattaaatctactatttaatcaccacacaaccatcatcgtcatcttc 39133439  T
Q  708 atctataatcattaacaccattcttcttaaatattattcttcat 751  Q
    |||||| ||  | |||||| |||||  ||||||||| |||||||    
T  39133440 atctatcattttcaacacccttctttctaaatattactcttcat 39133483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 289 - 396
Target Start/End: Complemental strand, 23561252 - 23561145
Alignment:
Q  289 ttttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttat 388  Q
    ||||| |||||||||||||   |  ||||||||||||||||||||| ||||||||||||||||| |||||||||| | ||||| ||||||||| |||| |    
T  23561252 tttttaggcttaatacatcccccgatcccttaacttattttattttctcagtttgatcccttaattattaagtgtcttaatttggtcctataattcttct 23561153  T
Q  389 gccgttta 396  Q
    | ||||||    
T  23561152 gacgttta 23561145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 317 - 396
Target Start/End: Original strand, 48866158 - 48866237
Alignment:
Q  317 cttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgttta 396  Q
    |||||||||||||||||| |||||||  ||||| ||||||||||||||||||||| |||||||||||||| | |||||||    
T  48866158 cttaacttattttattttctcagtttagtccctgaactattaagtgtgtcaatttggtcctataagtcttcttccgttta 48866237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 392 - 470
Target Start/End: Original strand, 47765530 - 47765608
Alignment:
Q  392 gtttattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcata 470  Q
    |||||||||||| |||||||| ||||||||| |||||||||||||| |||||||||||  |||||||||||||| ||||    
T  47765530 gtttattgttttggtcatctccgttagtttttaacatcaaatatcttaggtgaaccattgttaaagatggtccaccata 47765608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 314 - 448
Target Start/End: Complemental strand, 48867532 - 48867398
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 413  Q
    ||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||| |||| || ||||||    |||||| |  | | ||| | |||    
T  48867532 tcccttaacttattttattttctcaatttggtcccttaactattaagtgtgtcaatttggtcccattagtctttctacgtttactaatgtggtcctttct 48867433  T
Q  414 gttagttttgaacatcaaatatctaaggtgaacca 448  Q
    ||||||||| ||| | |||| ||||||||||||||    
T  48867432 gttagtttttaaccttaaatgtctaaggtgaacca 48867398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 289 - 417
Target Start/End: Complemental strand, 10987780 - 10987652
Alignment:
Q  289 ttttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttat 388  Q
    ||||||||||||||||||| ||   ||||||||||||||||   |||||| |||| |||| ||||||| |||||| ||||||| |||| |||| | ||||    
T  10987780 ttttttggcttaatacatcatttgatcccttaacttatttttggttttcattttggtcccctaactataaagtgtctcaatttggtcccataaattttat 10987681  T
Q  389 gccgtttattgttttagtcatctctgtta 417  Q
    ||||||| || |||| ||| |||||||||    
T  10987680 gccgttttttattttggtcctctctgtta 10987652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 316 - 448
Target Start/End: Complemental strand, 35174482 - 35174350
Alignment:
Q  316 ccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctctgt 415  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||| ||||  | |||| |||| |||| |  |||||| | |||| ||||| |||||    
T  35174482 ccttaacttattttattttttcattttggtcccttaactattaagtgtttcaaaatggtcccataactcttctatcgtttactattttggtcatttctgt 35174383  T
Q  416 tagttttgaacatcaaatatctaaggtgaacca 448  Q
    || |||| ||| | |||  ||||||||||||||    
T  35174382 taatttttaaccttaaaagtctaaggtgaacca 35174350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 400 - 477
Target Start/End: Complemental strand, 7483541 - 7483464
Alignment:
Q  400 ttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcatatgcctta 477  Q
    |||| |||||||| ||||||||| ||||||||||||||||||||||||||||| |||  ||| ||| |||||||||||    
T  7483541 ttttggtcatctccgttagtttttaacatcaaatatctaaggtgaaccatattaaaaagtggcccaccatatgcctta 7483464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 333 - 465
Target Start/End: Original strand, 19622038 - 19622170
Alignment:
Q  333 ttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctctgttagttttgaacatcaaa 432  Q
    |||||| |||| |||| ||||||| |||||| |||||||||||  |||| |||| |||  |||| || ||| ||| |||| ||||||||| |||||||||    
T  19622038 ttttcactttggtcccctaactataaagtgtctcaatttagtctcataaatcttctgctatttactggtttggtcctctccgttagttttcaacatcaaa 19622137  T
Q  433 tatctaaggtgaaccatatttaaagatggtcca 465  Q
    | | |||||||||| || ||||||| |||||||    
T  19622138 tgtttaaggtgaactatgtttaaaggtggtcca 19622170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 318 - 422
Target Start/End: Complemental strand, 32980550 - 32980446
Alignment:
Q  318 ttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctctgtta 417  Q
    |||||||||||| | |||||| |||| |||| ||||||  |||||| ||||||| ||||||||| |||| ||||||||| | |||| |||||||| ||||    
T  32980550 ttaacttattttctgttttcaatttggtcccctaactacaaagtgtctcaatttggtcctataaatcttctgccgtttactattttggtcatctccgtta 32980451  T
Q  418 gtttt 422  Q
    |||||    
T  32980450 gtttt 32980446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 295 - 419
Target Start/End: Original strand, 35173142 - 35173266
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 394  Q
    |||||||||||||   || ||||||||||||||||||||| ||| ||| |||||||||||||||||| | ||||||| |||  |||| |||| || ||||    
T  35173142 ggcttaatacatcccccagtcccttaacttattttattttctcaatttcatcccttaactattaagtatttcaatttggtctcataactcttttgtcgtt 35173241  T
Q  395 tattgttttagtcatctctgttagt 419  Q
    || | |||| ||||| ||| |||||    
T  35173242 tactattttggtcatttctattagt 35173266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 295 - 419
Target Start/End: Complemental strand, 42634007 - 42633883
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 394  Q
    ||||||||||||| ||   ||||||||||||||||   |||||| |||| |||| |||||||  ||||| ||||||| |||| |||| ||||||| ||||    
T  42634007 ggcttaatacatcatttggtcccttaacttatttttgattttcaatttggtcccctaactatagagtgtctcaatttggtcccataaatcttatgtcgtt 42633908  T
Q  395 tattgttttagtcatctctgttagt 419  Q
    |||| |||| ||| |||||||||||    
T  42633907 tattattttggtcctctctgttagt 42633883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 619 - 713
Target Start/End: Complemental strand, 24753368 - 24753269
Alignment:
Q  619 caacaacttcatcaataaaatctagaaaatcccaaaacta-----ataattaaacctactatttaatcaccacacaaccatcattatcatcgtcatctat 713  Q
    |||||||||||||||| |||||  |||||||||||||  |     ||||||||||||||| ||||||||||||||||| |||||| ||||| ||||||||    
T  24753368 caacaacttcatcaatcaaatccggaaaatcccaaaataataaatataattaaacctactctttaatcaccacacaactatcattgtcatcttcatctat 24753269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 682 - 757
Target Start/End: Original strand, 31638480 - 31638555
Alignment:
Q  682 accacacaaccatcattatcatcgtcatctataatcattaacaccattcttcttaaatattattcttcatcttcat 757  Q
    ||||| ||||||||||| || || |||||||| ||||| |||||| |||||| |||||||||||||||||||||||    
T  31638480 accacgcaaccatcattgtcttcttcatctatcatcatcaacacccttcttcctaaatattattcttcatcttcat 31638555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 525 - 576
Target Start/End: Original strand, 53808543 - 53808594
Alignment:
Q  525 cgttgaatcatgtaggatctattgtactttactgtgaaccactaacacctaa 576  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  53808543 cgttggatcatgtaggatctattgtattttactgtgaaccactaacacctaa 53808594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 294 - 368
Target Start/End: Complemental strand, 7921765 - 7921691
Alignment:
Q  294 tggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaa 368  Q
    |||||||||||||| | |  |||||||||||||||| |||| ||||||||||| |||||||||||||||| ||||    
T  7921765 tggcttaatacatcctccggtcccttaacttattttgttttctcagtttgatcacttaactattaagtgtctcaa 7921691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 523 - 576
Target Start/End: Original strand, 11219653 - 11219706
Alignment:
Q  523 accgttgaatcatgtaggatctattgtactttactgtgaaccactaacacctaa 576  Q
    |||||||||| ||||||| ||||||||||||| |||||||||||||||||||||    
T  11219653 accgttgaattatgtagggtctattgtactttcctgtgaaccactaacacctaa 11219706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 289 - 418
Target Start/End: Complemental strand, 54654093 - 54653964
Alignment:
Q  289 ttttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttat 388  Q
    ||||||||||||||||||| ||   ||||||||||||||||    ||||| |||| |||||||||||| |||||| ||||||| |||| |||| |||| |    
T  54654093 ttttttggcttaatacatcatttggtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataattcttct 54653994  T
Q  389 gccgtttattgttttagtcatctctgttag 418  Q
    | |||||| | |||| ||| |||| |||||    
T  54653993 gtcgtttactattttggtcctctccgttag 54653964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 664 - 726
Target Start/End: Original strand, 21728185 - 21728247
Alignment:
Q  664 taaacctactatttaatcaccacacaaccatcattatcatcgtcatctataatcattaacacc 726  Q
    ||||||||||||||| |||| |||| ||||||||||||||| |||||||| ||||| ||||||    
T  21728185 taaacctactatttagtcactacaccaccatcattatcatcttcatctatcatcatcaacacc 21728247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 314 - 371
Target Start/End: Original strand, 12060672 - 12060729
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaattt 371  Q
    ||||||||||||||||||||| |||||||  || |||||||||||||||| |||||||    
T  12060672 tcccttaacttattttattttctcagtttagtctcttaactattaagtgtctcaattt 12060729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 294 - 419
Target Start/End: Original strand, 42632700 - 42632825
Alignment:
Q  294 tggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgt 393  Q
    |||||||||||||| ||   |||||||||||| |||   |||||| |||| |||| ||||||| |||||| |||||||  ||| |||| ||||||| |||    
T  42632700 tggcttaatacatcatttggtcccttaacttacttttggttttcaatttggtcccctaactataaagtgtctcaatttgatcccataaatcttatgtcgt 42632799  T
Q  394 ttattgttttagtcatctctgttagt 419  Q
    ||| | |||||||| |||| ||||||    
T  42632800 ttactattttagtcctctccgttagt 42632825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 416 - 481
Target Start/End: Original strand, 31638234 - 31638301
Alignment:
Q  416 tagttttgaacatcaaatat--ctaaggtgaaccatatttaaagatggtccagcatatgccttactaa 481  Q
    ||||||| ||||||||||||  |||||||||||||||||||||| ||||| | |||| ||||||||||    
T  31638234 tagtttttaacatcaaatatatctaaggtgaaccatatttaaaggtggtctaccatacgccttactaa 31638301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 314 - 386
Target Start/End: Original strand, 43345333 - 43345405
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtctt 386  Q
    ||||||||||||||||||||| |||||| | |||||||||||| || ||| ||||||| |||| |||| ||||    
T  43345333 tcccttaacttattttattttctcagttaggtcccttaactataaaatgtttcaatttggtcccataaatctt 43345405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 314 - 377
Target Start/End: Complemental strand, 33000902 - 33000839
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcct 377  Q
    |||| |||||||||||| ||| ||||||||||||||||||||||||  || ||||||| |||||    
T  33000902 tcccctaacttattttaatttctcagtttgatcccttaactattaaacgtttcaatttggtcct 33000839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 316 - 363
Target Start/End: Original strand, 38639034 - 38639081
Alignment:
Q  316 ccttaacttattttattttttcagtttgatcccttaactattaagtgt 363  Q
    ||||||||||||||| |||||||||||| |||||||||||| ||||||    
T  38639034 ccttaacttattttagtttttcagtttggtcccttaactataaagtgt 38639081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 314 - 377
Target Start/End: Complemental strand, 39531918 - 39531855
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcct 377  Q
    ||||||||||||||||| ||| ||||||| ||||||||||||| || ||| ||||||| |||||    
T  39531918 tcccttaacttattttaatttctcagtttaatcccttaactatgaaatgtttcaatttggtcct 39531855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 663 - 726
Target Start/End: Complemental strand, 47431021 - 47430958
Alignment:
Q  663 ttaaacctactatttaatcaccacacaaccatcattatcatcgtcatctataatcattaacacc 726  Q
    ||||||||||||||| ||||| |||| ||||||||| ||||| |||||||| ||||| ||||||    
T  47431021 ttaaacctactatttcatcactacaccaccatcattgtcatcttcatctatcatcatcaacacc 47430958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 295 - 422
Target Start/End: Complemental strand, 49334458 - 49334331
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 394  Q
    ||||||||||||| || | ||| || ||||||||| | |||||| |||| ||| |||||||| || ||| ||||| | |||| |||| |||| | |||||    
T  49334458 ggcttaatacatcatttaatcctttgacttattttttgttttcattttggtcctttaactataaattgtctcaatatggtccgataaatcttctaccgtt 49334359  T
Q  395 tattgttttagtcatctctgttagtttt 422  Q
    || | ||||  |||||||||||||||||    
T  49334358 tactattttgatcatctctgttagtttt 49334331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 314 - 377
Target Start/End: Original strand, 50150735 - 50150798
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcct 377  Q
    ||||||||||||||||| ||| |||||||| || |||||||||||| ||| ||||||| |||||    
T  50150735 tcccttaacttattttaatttctcagtttggtcacttaactattaaatgtttcaatttggtcct 50150798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 400 - 462
Target Start/End: Complemental strand, 34903010 - 34902948
Alignment:
Q  400 ttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggt 462  Q
    |||| |||||||| ||||||||| |||| ||||| ||||| ||||||||||||||||| ||||    
T  34903010 ttttggtcatctccgttagtttttaacaccaaatgtctaaagtgaaccatatttaaaggtggt 34902948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 295 - 381
Target Start/End: Original strand, 51400210 - 51400296
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataa 381  Q
    |||||||||||| |||   ||||||||||||||||   |||||| |||||| || ||||||| |||||| |||||||||||| ||||    
T  51400210 ggcttaatacatgttttggtcccttaacttatttttggttttcactttgattccctaactataaagtgtctcaatttagtcccataa 51400296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 314 - 396
Target Start/End: Complemental strand, 51401453 - 51401371
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgttta 396  Q
    ||||||||||||||||   |||||| |||| |||| ||||||| |||||| ||||||| |||| |||| |||| |||||||||    
T  51401453 tcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcccataaatcttctgccgttta 51401371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 314 - 371
Target Start/End: Original strand, 1031830 - 1031887
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaattt 371  Q
    ||||||||||||||||| ||| ||||| || ||||||||||||||| ||| |||||||    
T  1031830 tcccttaacttattttaatttctcagtgtggtcccttaactattaaatgtttcaattt 1031887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 316 - 377
Target Start/End: Original strand, 4067942 - 4068003
Alignment:
Q  316 ccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcct 377  Q
    ||||||||||||||| ||| ||||||| |||||||||||||||| ||| | ||||| |||||    
T  4067942 ccttaacttattttaatttatcagtttaatcccttaactattaaatgttttaatttggtcct 4068003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 314 - 359
Target Start/End: Original strand, 39530809 - 39530854
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaa 359  Q
    ||||||||||||||||| ||| ||||| ||||||||||||||||||    
T  39530809 tcccttaacttattttaatttctcagtgtgatcccttaactattaa 39530854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 314 - 359
Target Start/End: Original strand, 45730651 - 45730696
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaa 359  Q
    ||||||||||||||||| ||| |||||||| |||||||||||||||    
T  45730651 tcccttaacttattttaatttctcagtttggtcccttaactattaa 45730696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 314 - 419
Target Start/End: Complemental strand, 51825723 - 51825618
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 413  Q
    ||||||||||||||||    ||||| |||| |||||||||||| |||||| ||||||| |||| |||| |||| || |||||| | |||| ||||| ||     
T  51825723 tcccttaacttatttttggatttcactttggtcccttaactataaagtgtttcaatttggtcccataaatcttctgtcgtttactattttggtcatatcc 51825624  T
Q  414 gttagt 419  Q
    ||||||    
T  51825623 gttagt 51825618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 295 - 396
Target Start/End: Original strand, 54752611 - 54752712
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 394  Q
    ||||||||||||| ||   ||||||||||||||||   |||||| |||  |||| ||||||| |||||| ||||||| ||||| ||  ||||||||||||    
T  54752611 ggcttaatacatcatttggtcccttaacttatttttcattttcaatttagtcccctaactataaagtgtctcaatttggtcctgtatatcttatgccgtt 54752710  T
Q  395 ta 396  Q
    ||    
T  54752711 ta 54752712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 315 - 359
Target Start/End: Original strand, 32999812 - 32999856
Alignment:
Q  315 cccttaacttattttattttttcagtttgatcccttaactattaa 359  Q
    |||||||||||||||| ||| |||||||| |||||||||||||||    
T  32999812 cccttaacttattttaatttctcagtttggtcccttaactattaa 32999856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 314 - 422
Target Start/End: Original strand, 48252947 - 48253055
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 413  Q
    |||||||||||||| | | |||| | |||| |||| ||||||| |||||| ||||||| |||| |||||||||   ||||||| |  | ||||||||||     
T  48252947 tcccttaacttattctttgtttttattttggtcccctaactataaagtgtctcaatttggtcccataagtcttcctccgtttactaatgtagtcatctcc 48253046  T
Q  414 gttagtttt 422  Q
    |||||||||    
T  48253047 gttagtttt 48253055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 283 - 359
Target Start/End: Original strand, 48336330 - 48336406
Alignment:
Q  283 taataattttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaa 359  Q
    ||||| ||||||||||||||||||| ||  |||||||||||||||||   |||||| |||| |||  ||||||||||    
T  48336330 taatatttttttggcttaatacatcatttgctcccttaacttattttcagttttcaatttggtcctctaactattaa 48336406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 663 - 725
Target Start/End: Original strand, 28776725 - 28776787
Alignment:
Q  663 ttaaacctactatttaatcaccacacaaccatcattatcatcgtcatctataatcattaacac 725  Q
    ||||||| | ||||||||||| |||| ||||||||| ||||| |||||||| ||||| |||||    
T  28776725 ttaaaccaattatttaatcactacaccaccatcattgtcatcttcatctatcatcatcaacac 28776787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 295 - 417
Target Start/End: Original strand, 41386125 - 41386247
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 394  Q
    ||||||||||||| ||   ||||||||||||||||   |||||| |||| |||| ||||||| |||||| ||||||| || | |||| ||||| | ||||    
T  41386125 ggcttaatacatcgtttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggttccataaatcttacgacgtt 41386224  T
Q  395 tattgttttagtcatctctgtta 417  Q
    || | |||| ||| |||| ||||    
T  41386225 tactattttggtcctctccgtta 41386247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 289 - 371
Target Start/End: Complemental strand, 47808233 - 47808151
Alignment:
Q  289 ttttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaattt 371  Q
    |||||||||||||||||||  | | ||||||||||||||||    ||||| |||| | |||||||||| |||||| |||||||    
T  47808233 ttttttggcttaatacatcacttagtcccttaacttatttttggatttcactttggttccttaactataaagtgtctcaattt 47808151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 664 - 726
Target Start/End: Original strand, 50879972 - 50880034
Alignment:
Q  664 taaacctactatttaatcaccacacaaccatcattatcatcgtcatctataatcattaacacc 726  Q
    |||||||||||||||||||| |||| |  |||||| ||||| |||||||| ||||| ||||||    
T  50879972 taaacctactatttaatcactacaccaatatcattgtcatcttcatctatcatcatgaacacc 50880034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 314 - 359
Target Start/End: Original strand, 7583973 - 7584018
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaa 359  Q
    |||||||||||||||| || ||||| |||| |||||||||||||||    
T  7583973 tcccttaacttatttttttgtttcattttggtcccttaactattaa 7584018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 661 - 726
Target Start/End: Complemental strand, 37610607 - 37610542
Alignment:
Q  661 aattaaacctactatttaatcaccacacaaccatcattatcatcgtcatctataatcattaacacc 726  Q
    ||||||||||||||||| ||||| |||  ||||||||  ||||| |||||||| ||||| ||||||    
T  37610607 aattaaacctactatttgatcactacaataccatcatagtcatcttcatctatcatcatcaacacc 37610542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 285 - 394
Target Start/End: Complemental strand, 48035455 - 48035346
Alignment:
Q  285 ataattttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtc 384  Q
    |||| ||| |||||||||||||  ||   ||||||||||||||||    ||||| |||| |||| ||||||| |||||| ||||||| ||||  || |||    
T  48035455 ataaatttatggcttaatacatgctttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtc 48035356  T
Q  385 ttatgccgtt 394  Q
    ||||||||||    
T  48035355 ttatgccgtt 48035346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 6e-27; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 296 - 470
Target Start/End: Complemental strand, 18139607 - 18139433
Alignment:
Q  296 gcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgttt 395  Q
    |||||||||||| ||   ||||||||||||||||   |||||| ||||||||  ||||||| |||||| |||| || ||||  ||  |||| ||||||||    
T  18139607 gcttaatacatcatttggtcccttaacttattttccgttttcactttgatcctctaactataaagtgtctcaaattggtcccttatatcttctgccgttt 18139508  T
Q  396 attgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcata 470  Q
    |||||||| ||| ||||  |||||||| |||||||||| ||||||||||||||| |||||||||| |||| ||||    
T  18139507 attgttttggtcctctccattagtttttaacatcaaatgtctaaggtgaaccatgtttaaagatgatccaccata 18139433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 314 - 470
Target Start/End: Complemental strand, 14328876 - 14328720
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 413  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||| |||  |||| |||| || |||||| | |||| ||| ||||     
T  14328876 tcccttaacttattttattttctcagtttgatcccttaactattaagtgtcttaatttggtctcataattcttttgtcgtttactattttggtcctctcc 14328777  T
Q  414 gttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcata 470  Q
    |||| |||| ||| | |||| ||||||||||||||  |||| || ||||||| ||||    
T  14328776 gttactttttaaccttaaatgtctaaggtgaaccaactttataggtggtccaccata 14328720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 314 - 470
Target Start/End: Complemental strand, 14421886 - 14421730
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 413  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||| |||  |||| |||| || |||||| | |||| ||| ||||     
T  14421886 tcccttaacttattttattttctcagtttgatcccttaactattaagtgtcttaatttggtctcataattcttttgtcgtttactattttggtcctctcc 14421787  T
Q  414 gttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcata 470  Q
    |||| |||| ||| | |||| ||||||||||||||  |||| || ||||||| ||||    
T  14421786 gttactttttaaccttaaatgtctaaggtgaaccaactttataggtggtccaccata 14421730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 314 - 386
Target Start/End: Original strand, 13800045 - 13800117
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtctt 386  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||| |||| |||| ||||    
T  13800045 tcccttaacttattttattttctcagtttggtcccttaactattaattgtgtcaatttggtcccataaatctt 13800117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 295 - 470
Target Start/End: Original strand, 31738358 - 31738533
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 394  Q
    ||||||||||||| ||   ||||||||||||||||   |||||| |||| |||| ||||||| |||||| ||||||| |||| ||||||||| ||| |||    
T  31738358 ggcttaatacatcctttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtttcaatttggtcccataagtcttctgcggtt 31738457  T
Q  395 tattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcata 470  Q
    ||   |||| ||| |||| ||||||||| ||| | |||| ||||| ||||||||  |||| ||| |||||| ||||    
T  31738458 taccattttggtcctctccgttagtttttaaccttaaatgtctaatgtgaaccaactttatagacggtccaccata 31738533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 403 - 465
Target Start/End: Complemental strand, 13507184 - 13507122
Alignment:
Q  403 tagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtcca 465  Q
    |||||||||||||||||||| |||||||||| | ||||||||||||||||||||| |||||||    
T  13507184 tagtcatctctgttagtttttaacatcaaatgtttaaggtgaaccatatttaaaggtggtcca 13507122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 523 - 576
Target Start/End: Complemental strand, 34084127 - 34084074
Alignment:
Q  523 accgttgaatcatgtaggatctattgtactttactgtgaaccactaacacctaa 576  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  34084127 accgttgaattatgtagggtctattgtactttactgtgaaccactaacacctaa 34084074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 289 - 419
Target Start/End: Complemental strand, 8412443 - 8412313
Alignment:
Q  289 ttttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttat 388  Q
    ||||||||||||||||||  ||   |||||||||||||||| | |||||| |||  |||| ||||||| |||||| ||||||| |||| |||| |||| |    
T  8412443 ttttttggcttaatacattatttggtcccttaacttattttttgttttcaatttagtcccctaactataaagtgtctcaatttggtcccataaatcttgt 8412344  T
Q  389 gccgtttattgttttagtcatctctgttagt 419  Q
    |||||||| | |||| ||| |||| ||||||    
T  8412343 gccgtttactattttggtcctctccgttagt 8412313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 288 - 386
Target Start/End: Original strand, 14326141 - 14326239
Alignment:
Q  288 attttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtctt 386  Q
    |||||||| |||||||||||   |  ||||||||||||||||||||| ||||||||||||||||| |||| || || ||||||| |||| |||| ||||    
T  14326141 attttttgacttaatacatcccccgatcccttaacttattttattttctcagtttgatcccttaattattgagcgtctcaatttggtcccataattctt 14326239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 288 - 386
Target Start/End: Original strand, 14419151 - 14419249
Alignment:
Q  288 attttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtctt 386  Q
    |||||||| |||||||||||   |  ||||||||||||||||||||| ||||||||||||||||| |||| || || ||||||| |||| |||| ||||    
T  14419151 attttttgacttaatacatcccccgatcccttaacttattttattttctcagtttgatcccttaattattgagcgtctcaatttggtcccataattctt 14419249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 318 - 396
Target Start/End: Complemental strand, 31740370 - 31740292
Alignment:
Q  318 ttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgttta 396  Q
    |||||||||||| | |||||| |||| |||||||||||| |||||| ||||||| |||| |||| ||||||||||||||    
T  31740370 ttaacttattttttgttttcaatttggtcccttaactataaagtgtctcaatttggtcccataaatcttatgccgttta 31740292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 290 - 375
Target Start/End: Original strand, 1692064 - 1692149
Alignment:
Q  290 tttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtc 375  Q
    |||| |||||||||||||   || |||||||| |||||||| |||||||||||| || |||||||||||| ||| |||||||||||    
T  1692064 ttttaggcttaatacatcccccagtcccttaatttattttaatttttcagtttggtctcttaactattaaatgtttcaatttagtc 1692149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 296 - 477
Target Start/End: Complemental strand, 33802137 - 33801956
Alignment:
Q  296 gcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgttt 395  Q
    |||||||||||| ||   ||||||||||||||||   |||||| |||| |||| ||||||| |||||| | |||||  ||| |||| |||| ||  ||||    
T  33802137 gcttaatacatcatttggtcccttaacttatttttggttttcactttggtcccctaactataaagtgtcttaatttgatcccataaatcttctgtagttt 33802038  T
Q  396 attgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcatatgcctta 477  Q
    |  || || ||| |||| ||||||||| |||||||||||||||||||  |||||  || ||| ||||||| ||||| |||||    
T  33802037 accgtattggtcctctccgttagtttttaacatcaaatatctaaggtagaccatgattcaaggtggtccaccatatacctta 33801956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 293 - 377
Target Start/End: Complemental strand, 1757617 - 1757533
Alignment:
Q  293 ttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcct 377  Q
    ||||||||||||||| | |  ||||||||||||||||| ||| |||||||| |||||||||||||||  || ||||||| |||||    
T  1757617 ttggcttaatacatcctccggtcccttaacttattttaatttctcagtttggtcccttaactattaaacgtttcaatttggtcct 1757533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 317 - 365
Target Start/End: Complemental strand, 16269867 - 16269819
Alignment:
Q  317 cttaacttattttattttttcagtttgatcccttaactattaagtgtgt 365  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  16269867 cttaacttattttattttctcagtttgatctcttaactattaagtgtgt 16269819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 314 - 422
Target Start/End: Complemental strand, 22300005 - 22299897
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 413  Q
    ||||||||||||||||   |||||| |||| |||| ||||||| |||||| ||||||| |||| |||| |||| ||||||||| | |||| ||||||||     
T  22300005 tcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcccataaatcttctgccgtttactattttggtcatctcc 22299906  T
Q  414 gttagtttt 422  Q
    |||| ||||    
T  22299905 gttattttt 22299897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 290 - 356
Target Start/End: Complemental strand, 5693713 - 5693647
Alignment:
Q  290 tttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactat 356  Q
    ||||||||||||||||||   |  ||||||||||||||||||||| ||| |||||||||||||||||    
T  5693713 tttttggcttaatacatcccccgatcccttaacttattttattttctcaatttgatcccttaactat 5693647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 295 - 396
Target Start/End: Original strand, 5311274 - 5311375
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 394  Q
    ||||||||||||| ||   ||||||||||||||||   |||||| |||  |||| ||||||| |||||| ||||||| ||||||||| ||||||| ||||    
T  5311274 ggcttaatacatcatttggtcccttaacttatttttggttttcaatttagtcccctaactataaagtgtctcaatttggtcctataaatcttatgtcgtt 5311373  T
Q  395 ta 396  Q
    ||    
T  5311374 ta 5311375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 296 - 445
Target Start/End: Complemental strand, 27440295 - 27440146
Alignment:
Q  296 gcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgttt 395  Q
    |||||||||||| ||   ||||||||||||||||    ||||| ||||||||||||||| | || ||| ||||||| |||| |||| |||| | ||||||    
T  27440295 gcttaatacatcatttggtcccttaacttatttttgaatttcattttgatcccttaactttaaattgtctcaatttggtcccataaatcttcttccgttt 27440196  T
Q  396 attgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaa 445  Q
    | | |||| ||| |||| |||| |||| ||| | |||| |||||||||||    
T  27440195 actattttggtcctctccgttaatttttaactttaaatgtctaaggtgaa 27440146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 297 - 417
Target Start/End: Original strand, 8411083 - 8411203
Alignment:
Q  297 cttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgttta 396  Q
    ||||||||||| || | | ||||||||||||||   |||||| |||  |||| ||||||| |||||| ||||||| ||| ||||| ||||||||||||||    
T  8411083 cttaatacatcatttagttccttaacttatttttggttttcaatttagtcccctaactataaagtgtctcaatttggtcttataaatcttatgccgttta 8411182  T
Q  397 ttgttttagtcatctctgtta 417  Q
     | |||| ||| |||| ||||    
T  8411183 ctattttggtcctctccgtta 8411203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 295 - 359
Target Start/End: Complemental strand, 27108295 - 27108231
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaa 359  Q
    ||||||||| |||| ||  ||||||||||||||||| ||| |||||||| |||||||||||||||    
T  27108295 ggcttaatagatctctcggtcccttaacttattttaatttctcagtttggtcccttaactattaa 27108231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 295 - 359
Target Start/End: Complemental strand, 27150092 - 27150028
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaa 359  Q
    ||||||||| |||| ||  ||||||||||||||||| ||| |||||||| |||||||||||||||    
T  27150092 ggcttaatagatctctcggtcccttaacttattttaatttctcagtttggtcccttaactattaa 27150028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 318 - 359
Target Start/End: Complemental strand, 1693079 - 1693038
Alignment:
Q  318 ttaacttattttattttttcagtttgatcccttaactattaa 359  Q
    ||||||||||||| |||||||||||| |||||||||||||||    
T  1693079 ttaacttattttaatttttcagtttggtcccttaactattaa 1693038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 314 - 381
Target Start/End: Original strand, 9927620 - 9927687
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataa 381  Q
    |||||||||||||||| | |||| |||||| |||| ||||||| |||||| ||||||| |||| ||||    
T  9927620 tcccttaacttattttttgtttttagtttggtcccctaactataaagtgtctcaatttggtcccataa 9927687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 317 - 360
Target Start/End: Complemental strand, 16251675 - 16251632
Alignment:
Q  317 cttaacttattttattttttcagtttgatcccttaactattaag 360  Q
    ||||| ||||||||||||||||||||| |||||||| |||||||    
T  16251675 cttaaattattttattttttcagtttggtcccttaattattaag 16251632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 314 - 377
Target Start/End: Original strand, 27107195 - 27107258
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcct 377  Q
    ||||||||||||||||| ||| |||||||||||  ||||||||||| | | ||||||| |||||    
T  27107195 tcccttaacttattttaatttctcagtttgatcaattaactattaaatatttcaatttggtcct 27107258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 314 - 377
Target Start/End: Original strand, 27149001 - 27149064
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcct 377  Q
    ||||||||||||||||| ||| |||||||||||  ||||||||||| | | ||||||| |||||    
T  27149001 tcccttaacttattttaatttctcagtttgatcaattaactattaaatatttcaatttggtcct 27149064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 295 - 377
Target Start/End: Complemental strand, 11724417 - 11724335
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcct 377  Q
    |||||||||||||  ||  ||||||||||||||||| |||||| || || || ||||||||||||  || ||||||| |||||    
T  11724417 ggcttaatacatccctcgatcccttaacttattttaatttttcggtgtggtcacttaactattaaacgtttcaatttggtcct 11724335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 663 - 725
Target Start/End: Complemental strand, 11801183 - 11801121
Alignment:
Q  663 ttaaacctactatttaatcaccacacaaccatcattatcatcgtcatctataatcattaacac 725  Q
    ||||||| | |||||||| || |||| ||||||||| ||||| |||||||||||||| |||||    
T  11801183 ttaaaccaattatttaattactacaccaccatcattgtcatcttcatctataatcatcaacac 11801121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 289 - 422
Target Start/End: Original strand, 27438779 - 27438912
Alignment:
Q  289 ttttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttat 388  Q
    ||||| || |||||||||| ||   ||||||||||||||||    ||||| |||| ||| |||||||| |||||| |||||||  ||| |||| | || |    
T  27438779 tttttaggtttaatacatcatttggtcccttaacttatttttggatttcattttggtcctttaactataaagtgtctcaatttgatcccataaatattct 27438878  T
Q  389 gccgtttattgttttagtcatctctgttagtttt 422  Q
    |||||||| | |||| |||||||| |||| ||||    
T  27438879 gccgtttactcttttggtcatctccgttaatttt 27438912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 296 - 381
Target Start/End: Original strand, 33129277 - 33129362
Alignment:
Q  296 gcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataa 381  Q
    |||| ||||| |||||  ||| |||| |||||||| |||||||||||  || ||||||||| |||||| ||||||| ||| |||||    
T  33129277 gctttatacacctttcggtcctttaatttattttaatttttcagtttagtctcttaactataaagtgtctcaatttggtcttataa 33129362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 314 - 371
Target Start/End: Original strand, 33807703 - 33807760
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaattt 371  Q
    ||||||||||||||||   |||||| |||| |||||||||||| |||||| |||||||    
T  33807703 tcccttaacttatttttggttttcactttggtcccttaactataaagtgtctcaattt 33807760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 314 - 465
Target Start/End: Complemental strand, 56802 - 56651
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 413  Q
    |||||||||||||||| |  ||||| |||| |||| ||| ||| |||||| ||||||| ||||||||| |||| ||||||||| |||||   || |||||    
T  56802 tcccttaacttattttttgatttcactttggtcccctaattataaagtgtctcaatttggtcctataaatcttctgccgtttactgtttagatcctctct 56703  T
Q  414 gttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtcca 465  Q
     |||||||| ||||||||||||||||||  ||| || |||||||||||||||    
T  56702 attagtttttaacatcaaatatctaagggaaactatgtttaaagatggtcca 56651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 56; Significance: 8e-23; HSPs: 3)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 611 - 757
Target Start/End: Complemental strand, 12992 - 12841
Alignment:
Q  611 atcttgaacaacaacttcatcaataaaatctagaaaatcccaaaacta-----ataattaaacctactatttaatcaccacacaaccatcattatcatcg 705  Q
    ||||| |||||||| ||||||||||||||  ||||||| ||||||  |     |||| ||||| || | ||||||||| |||||||||||||| |||||     
T  12992 atcttcaacaacaatttcatcaataaaattcagaaaattccaaaaaaataaaaataaataaacatattctttaatcactacacaaccatcattgtcatct 12893  T
Q  706 tcatctataatcattaacaccattcttcttaaatattattcttcatcttcat 757  Q
    |||||||| || || |||||| |||||| |||||||||||||||||||||||    
T  12892 tcatctatcattatcaacacccttcttcctaaatattattcttcatcttcat 12841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 314 - 481
Target Start/End: Complemental strand, 13306 - 13139
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 413  Q
    ||||||||||||||||   ||||||||||| |||| ||||||| || ||| ||||||| |||| |||| |||| | |||||   | |||| ||| | ||     
T  13306 tcccttaacttatttttggttttcagtttggtcccctaactataaaatgtctcaatttcgtcccataactcttcttccgttacctcttttggtcctatcc 13207  T
Q  414 gttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcatatgccttactaa 481  Q
     |||| ||| |||||||||| ||||||||||||||||||||||||||||||| ||||| || ||||||    
T  13206 attaggttttaacatcaaatgtctaaggtgaaccatatttaaagatggtccaccatataccctactaa 13139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 526 - 600
Target Start/End: Complemental strand, 13094 - 13020
Alignment:
Q  526 gttgaatcatgtaggatctattgtactttactgtgaaccactaacacctaagttaatccattcatattcttcttc 600  Q
    |||||||  |||||| |||||||||||||| ||| ||||||||||| ||||   ||||||||||| |||||||||    
T  13094 gttgaattttgtagggtctattgtactttattgtcaaccactaacatctaataaaatccattcatcttcttcttc 13020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 52; Significance: 2e-20; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 295 - 470
Target Start/End: Original strand, 15945 - 16115
Alignment:
Q  295 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 394  Q
    ||||||||||||| | |  ||||||||||||||||||||||||| |||| ||||||| |||| |||| | ||||     ||| ||||  |||||||||||    
T  15945 ggcttaatacatcctccggtcccttaacttattttattttttcactttggtcccttagctataaagtatttcaa-----tcccataaaccttatgccgtt 16039  T
Q  395 tattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcata 470  Q
    || | |||||||| |||| ||||||||| ||| | |||| |||||| |||||||  |||| |||||||||| ||||    
T  16040 tactattttagtcctctccgttagtttttaaccttaaatgtctaagatgaaccaactttatagatggtccaccata 16115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 318 - 413
Target Start/End: Complemental strand, 17258 - 17163
Alignment:
Q  318 ttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 413  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||| |||| |||| || | |||| | |||||||| |||||    
T  17258 ttaacttattttattttttcagtttggtcccttaactattaagtgtctcaatttaatccaataactcttctgtcatttactattttagtcctctct 17163  T

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Target: scaffold0046 (Bit Score: 48; Significance: 5e-18; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 611 - 757
Target Start/End: Original strand, 23755 - 23906
Alignment:
Q  611 atcttgaacaacaacttcatcaataaaatctagaaaatcccaaaacta-----ataattaaacctactatttaatcaccacacaaccatcattatcatcg 705  Q
    ||||| |||||||||||||||||||||||| ||||||| ||||||  |     |||| ||||| || | ||||||||| | |||| ||| ||| |||||     
T  23755 atctttaacaacaacttcatcaataaaatccagaaaattccaaaaaaataaaaataaataaacatattctttaatcactatacaatcataattgtcatct 23854  T
Q  706 tcatctataatcattaacaccattcttcttaaatattattcttcatcttcat 757  Q
    |||||||| || || ||| || |||||| |||||||||||||||||||||||    
T  23855 tcatctatcattatcaactcccttcttcctaaatattattcttcatcttcat 23906  T

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Target: scaffold0046; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 544 - 597
Target Start/End: Original strand, 23674 - 23727
Alignment:
Q  544 tattgtactttactgtgaaccactaacacctaagttaatccattcatattcttc 597  Q
    |||||||||||||||| ||||||||||| ||||   ||||||||||| ||||||    
T  23674 tattgtactttactgtcaaccactaacatctaataaaatccattcatcttcttc 23727  T

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Target: scaffold0015 (Bit Score: 46; Significance: 8e-17; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 400 - 481
Target Start/End: Complemental strand, 207814 - 207733
Alignment:
Q  400 ttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcatatgccttactaa 481  Q
    |||| ||| |||| ||||||||| |||||||||| ||| ||||||||||| ||||||| ||||||| |||||||||||||||    
T  207814 ttttggtcctctccgttagtttttaacatcaaatgtcttaggtgaaccatgtttaaaggtggtccaccatatgccttactaa 207733  T

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Target: scaffold0015; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 542 - 597
Target Start/End: Complemental strand, 207672 - 207617
Alignment:
Q  542 tctattgtactttactgtgaaccactaacacctaagttaatccattcatattcttc 597  Q
    |||||||||||||||||||||||||||||| || |   ||||||||||| ||||||    
T  207672 tctattgtactttactgtgaaccactaacatctgataaaatccattcatcttcttc 207617  T

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Target: scaffold0045 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 300 - 465
Target Start/End: Complemental strand, 77297 - 77130
Alignment:
Q  300 aatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattg 399  Q
    |||||||| || | || ||||||||||||| | |||||| |||| || | ||||||| ||| || ||||||| |||| |||| | || | ||||||| ||    
T  77297 aatacatcatttagtctcttaacttattttttgttttcactttggtctcctaactataaagcgtttcaatttggtcccataaatattctaccgtttactg 77198  T
Q  400 ttttagtcatctctgttagttttgaacatcaaatat--ctaaggtgaaccatatttaaagatggtcca 465  Q
    |||| ||| |||| |||| | ||  ||||||||| |  |||||||||||||||||||||| |||||||    
T  77197 ttttggtcttctccgttaatgtttgacatcaaatgtgtctaaggtgaaccatatttaaaggtggtcca 77130  T

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Target: scaffold0051 (Bit Score: 38; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 527 - 576
Target Start/End: Complemental strand, 39790 - 39741
Alignment:
Q  527 ttgaatcatgtaggatctattgtactttactgtgaaccactaacacctaa 576  Q
    |||||| ||||||| |||||||||||||||||||||||||||||| ||||    
T  39790 ttgaattatgtagggtctattgtactttactgtgaaccactaacatctaa 39741  T

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Target: scaffold0051; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 400 - 462
Target Start/End: Complemental strand, 39917 - 39855
Alignment:
Q  400 ttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggt 462  Q
    |||| ||| |||||||||||||| |||||||||  ||||||||||| ||||||||||| ||||    
T  39917 ttttggtcctctctgttagtttttaacatcaaaagtctaaggtgaatcatatttaaaggtggt 39855  T

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Target: scaffold0003 (Bit Score: 38; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 296 - 445
Target Start/End: Original strand, 47066 - 47215
Alignment:
Q  296 gcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgttt 395  Q
    |||||||||||| ||   ||||||||||||||||    ||||| ||||||||||||||| | || ||| ||||||| |||| |||| |||| | ||||||    
T  47066 gcttaatacatcatttggtcccttaacttatttttgaatttcattttgatcccttaactttaaattgtctcaatttggtcccataaatcttcttccgttt 47165  T
Q  396 attgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaa 445  Q
    | | |||| ||| |||| |||| |||| ||| | |||| |||||||||||    
T  47166 actattttggtcctctccgttaatttttaactttaaatgtctaaggtgaa 47215  T

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Target: scaffold0003; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 289 - 422
Target Start/End: Complemental strand, 48583 - 48450
Alignment:
Q  289 ttttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttat 388  Q
    ||||| || |||||||||| ||   ||||||||||||||||    ||||| |||| ||| |||||||| |||||| |||||||  ||| |||| | || |    
T  48583 tttttaggtttaatacatcatttggtcccttaacttatttttggatttcattttggtcctttaactataaagtgtctcaatttgatcccataaatattct 48484  T
Q  389 gccgtttattgttttagtcatctctgttagtttt 422  Q
    |||||||| | |||| |||||||| |||| ||||    
T  48483 gccgtttactcttttggtcatctccgttaatttt 48450  T

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Target: scaffold0166 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 287 - 371
Target Start/End: Complemental strand, 4346 - 4263
Alignment:
Q  287 aattttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaattt 371  Q
    ||||||||| |||||||||||  | | ||||||||||||||||||||| | |||||  |||||||| |||||||||| |||||||    
T  4346 aattttttgacttaatacatccct-agtcccttaacttattttattttcttagtttagtcccttaattattaagtgtctcaattt 4263  T

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Target: scaffold0009 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 294 - 377
Target Start/End: Complemental strand, 205674 - 205591
Alignment:
Q  294 tggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcct 377  Q
    |||||||||||||||  |  ||||||||||||||||| ||| |||||||| |||||||| ||||||  || ||||||| |||||    
T  205674 tggcttaatacatctcccggtcccttaacttattttaatttctcagtttggtcccttaattattaaacgtttcaatttggtcct 205591  T

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Target: scaffold0096 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 314 - 354
Target Start/End: Complemental strand, 5107 - 5067
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaact 354  Q
    |||||||||||||||| || |||||||||||||||||||||    
T  5107 tcccttaacttatttttttgtttcagtttgatcccttaact 5067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 314 - 377
Target Start/End: Complemental strand, 85178 - 85115
Alignment:
Q  314 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcct 377  Q
    ||||||||||||||||| ||| ||||| || |||||||||||||||  || ||||||| |||||    
T  85178 tcccttaacttattttaatttctcagtgtggtcccttaactattaaccgtttcaatttggtcct 85115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2127 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold2127
Description:

Target: scaffold2127; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 290 - 419
Target Start/End: Complemental strand, 641 - 512
Alignment:
Q  290 tttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatg 389  Q
    |||| ||||||||||||| ||   ||| ||||||||||||   |||||| || | |||| ||||||| |||||| ||||||| ||   |||| |||||||    
T  641 ttttaggcttaatacatcatttgatccattaacttatttttggttttcaattaggtcccctaactataaagtgtctcaatttggtgtcataaatcttatg 542  T
Q  390 ccgtttattgttttagtcatctctgttagt 419  Q
    ||||||| | |||| ||| |||| ||||||    
T  541 ccgtttactattttggtcctctccgttagt 512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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