View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19117_low_5 (Length: 546)

Name: NF19117_low_5
Description: NF19117
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19117_low_5
NF19117_low_5
[»] scaffold0197 (2 HSPs)
scaffold0197 (1-218)||(18663-18880)
scaffold0197 (1-211)||(13790-14000)
[»] chr5 (49 HSPs)
chr5 (219-524)||(41932504-41932815)
chr5 (1-220)||(31396487-31396706)
chr5 (1-218)||(31401346-31401563)
chr5 (1-218)||(33768555-33768772)
chr5 (1-218)||(33791687-33791904)
chr5 (1-218)||(2785746-2785963)
chr5 (1-211)||(28807082-28807292)
chr5 (5-209)||(37560955-37561159)
chr5 (1-210)||(15045064-15045272)
chr5 (1-209)||(37556133-37556341)
chr5 (33-210)||(27450225-27450402)
chr5 (32-210)||(30631763-30631941)
chr5 (33-210)||(27445382-27445559)
chr5 (3-210)||(1456645-1456852)
chr5 (33-210)||(43599133-43599311)
chr5 (33-210)||(43604625-43604803)
chr5 (33-210)||(43610117-43610295)
chr5 (42-210)||(29402557-29402725)
chr5 (1-210)||(16546223-16546433)
chr5 (33-124)||(43592688-43592779)
chr5 (1-210)||(16544001-16544211)
chr5 (1-210)||(40379685-40379895)
chr5 (1-210)||(40381896-40382106)
chr5 (1-205)||(25077718-25077923)
chr5 (1-205)||(25135687-25135892)
chr5 (32-124)||(31180664-31180756)
chr5 (31-220)||(24136297-24136486)
chr5 (160-220)||(14520796-14520856)
chr5 (33-218)||(26177466-26177651)
chr5 (33-210)||(22536668-22536845)
chr5 (33-218)||(9789624-9789809)
chr5 (33-218)||(18442048-18442233)
chr5 (53-218)||(16407641-16407806)
chr5 (33-210)||(10592851-10593027)
chr5 (53-218)||(9352807-9352972)
chr5 (31-218)||(29719965-29720153)
chr5 (160-210)||(31180773-31180823)
chr5 (160-210)||(43592797-43592847)
chr5 (33-209)||(26170366-26170542)
chr5 (31-88)||(29751558-29751615)
chr5 (143-218)||(16409077-16409152)
chr5 (143-206)||(36931855-36931918)
chr5 (33-109)||(38219845-38219921)
chr5 (143-218)||(15465050-15465125)
chr5 (143-181)||(25412396-25412434)
chr5 (160-205)||(31004657-31004703)
chr5 (160-209)||(11916453-11916502)
chr5 (143-218)||(29722152-29722227)
chr5 (143-218)||(29752315-29752390)
[»] chr6 (38 HSPs)
chr6 (1-218)||(33329932-33330149)
chr6 (1-218)||(16839114-16839331)
chr6 (1-218)||(33335429-33335646)
chr6 (1-220)||(6005790-6006009)
chr6 (1-211)||(5343848-5344058)
chr6 (1-212)||(6438867-6439078)
chr6 (1-158)||(28155130-28155287)
chr6 (1-210)||(14741933-14742142)
chr6 (1-210)||(11857351-11857560)
chr6 (1-210)||(22010196-22010405)
chr6 (1-124)||(14737159-14737282)
chr6 (50-210)||(30125025-30125185)
chr6 (33-210)||(6136363-6136540)
chr6 (31-124)||(5266486-5266579)
chr6 (31-219)||(5674228-5674416)
chr6 (33-218)||(22709460-22709645)
chr6 (33-210)||(16578917-16579094)
chr6 (33-210)||(16616286-16616463)
chr6 (1-210)||(33342470-33342681)
chr6 (33-205)||(34166678-34166851)
chr6 (160-220)||(5016966-5017026)
chr6 (33-205)||(27647480-27647652)
chr6 (53-218)||(2171939-2172104)
chr6 (143-218)||(23896882-23896957)
chr6 (160-218)||(24714938-24714997)
chr6 (160-211)||(31085952-31086003)
chr6 (160-210)||(5266596-5266646)
chr6 (1-109)||(13150957-13151067)
chr6 (160-210)||(14737092-14737142)
chr6 (1-109)||(34164552-34164662)
chr6 (1-109)||(6026942-6027051)
chr6 (31-109)||(411794-411873)
chr6 (31-109)||(3073156-3073234)
chr6 (160-205)||(5571761-5571806)
chr6 (143-219)||(6097911-6097987)
chr6 (33-210)||(25420804-25420981)
chr6 (143-175)||(24399579-24399611)
chr6 (143-175)||(24409699-24409731)
[»] chr1 (27 HSPs)
chr1 (1-220)||(43987946-43988165)
chr1 (1-212)||(44023382-44023593)
chr1 (1-211)||(25439405-25439615)
chr1 (1-211)||(25444598-25444808)
chr1 (1-212)||(1054519-1054730)
chr1 (1-212)||(39445866-39446077)
chr1 (1-209)||(41390970-41391177)
chr1 (1-156)||(41398625-41398779)
chr1 (1-210)||(44203225-44203435)
chr1 (32-124)||(24786918-24787010)
chr1 (32-124)||(24793740-24793832)
chr1 (31-218)||(20622634-20622821)
chr1 (53-218)||(19360912-19361077)
chr1 (160-218)||(37070334-37070392)
chr1 (31-219)||(51764989-51765177)
chr1 (160-220)||(21536110-21536170)
chr1 (160-211)||(13598967-13599018)
chr1 (143-218)||(26644373-26644448)
chr1 (55-218)||(19365768-19365931)
chr1 (143-218)||(24202251-24202326)
chr1 (160-219)||(3282273-3282332)
chr1 (160-210)||(24793673-24793723)
chr1 (161-218)||(13604095-13604152)
chr1 (33-210)||(9036010-9036187)
chr1 (31-109)||(21053648-21053727)
chr1 (31-109)||(9986894-9986972)
chr1 (31-88)||(24202360-24202417)
[»] chr2 (31 HSPs)
chr2 (219-496)||(4245988-4246269)
chr2 (1-218)||(19344793-19345010)
chr2 (1-218)||(19349651-19349868)
chr2 (219-524)||(4315114-4315416)
chr2 (219-529)||(4306252-4306559)
chr2 (1-210)||(39811484-39811693)
chr2 (219-534)||(4309133-4309442)
chr2 (31-210)||(14291939-14292118)
chr2 (219-534)||(4253074-4253383)
chr2 (1-210)||(32247157-32247345)
chr2 (31-210)||(9295869-9296048)
chr2 (32-210)||(11098394-11098572)
chr2 (1-210)||(12647750-12647960)
chr2 (53-220)||(3492212-3492379)
chr2 (33-209)||(25410081-25410257)
chr2 (33-205)||(4484738-4484910)
chr2 (53-218)||(30832921-30833086)
chr2 (160-220)||(28258667-28258727)
chr2 (160-216)||(36757419-36757475)
chr2 (33-218)||(32289148-32289333)
chr2 (143-210)||(44310478-44310545)
chr2 (160-210)||(8389631-8389681)
chr2 (160-211)||(33528104-33528155)
chr2 (160-210)||(10706733-10706783)
chr2 (169-211)||(20522797-20522839)
chr2 (160-210)||(21630511-21630561)
chr2 (160-210)||(39483443-39483493)
chr2 (143-218)||(40739382-40739457)
chr2 (160-219)||(23077943-23078002)
chr2 (164-219)||(33118696-33118751)
chr2 (143-183)||(29867491-29867531)
[»] chr8 (31 HSPs)
chr8 (1-218)||(35745762-35745979)
chr8 (1-212)||(39784330-39784541)
chr8 (1-210)||(10683746-10683955)
chr8 (31-210)||(36979828-36980007)
chr8 (1-210)||(25327671-25327880)
chr8 (31-210)||(33037294-33037473)
chr8 (1-210)||(18852634-18852844)
chr8 (1-210)||(18870028-18870238)
chr8 (31-210)||(4759541-4759720)
chr8 (32-210)||(30656097-30656275)
chr8 (1-210)||(6311719-6311928)
chr8 (1-124)||(10688692-10688815)
chr8 (37-210)||(7289434-7289608)
chr8 (31-218)||(1261414-1261601)
chr8 (33-210)||(3439095-3439271)
chr8 (143-218)||(7412877-7412952)
chr8 (160-211)||(5701958-5702009)
chr8 (1-210)||(42575691-42575902)
chr8 (33-219)||(26288332-26288518)
chr8 (33-219)||(26301589-26301775)
chr8 (33-219)||(26313583-26313769)
chr8 (33-112)||(25689646-25689725)
chr8 (160-210)||(10688625-10688675)
chr8 (160-209)||(4456575-4456624)
chr8 (34-210)||(15290150-15290327)
chr8 (34-210)||(15470519-15470696)
chr8 (160-209)||(19175233-19175282)
chr8 (143-218)||(2627318-2627393)
chr8 (160-210)||(25689568-25689618)
chr8 (53-109)||(2627427-2627483)
chr8 (143-218)||(31042908-31042983)
[»] scaffold0259 (1 HSPs)
scaffold0259 (1-211)||(1745-1955)
[»] scaffold0028 (1 HSPs)
scaffold0028 (1-211)||(148450-148660)
[»] chr7 (40 HSPs)
chr7 (1-211)||(24265683-24265893)
chr7 (1-211)||(16880444-16880654)
chr7 (1-211)||(16885299-16885509)
chr7 (1-211)||(24260827-24261037)
chr7 (1-209)||(21811747-21811955)
chr7 (1-206)||(24023830-24024035)
chr7 (1-212)||(31109075-31109287)
chr7 (31-210)||(2058419-2058597)
chr7 (1-210)||(12406641-12406850)
chr7 (1-210)||(4873505-4873714)
chr7 (31-210)||(21640237-21640416)
chr7 (219-534)||(34803140-34803442)
chr7 (32-210)||(20357035-20357213)
chr7 (1-210)||(18392563-18392773)
chr7 (1-102)||(12397289-12397390)
chr7 (31-218)||(24789426-24789613)
chr7 (31-218)||(21646456-21646643)
chr7 (143-218)||(21983792-21983867)
chr7 (1-210)||(6592704-6592914)
chr7 (33-210)||(20343507-20343684)
chr7 (143-228)||(21989456-21989541)
chr7 (33-220)||(48408396-48408583)
chr7 (33-218)||(39730933-39731118)
chr7 (33-206)||(43504536-43504709)
chr7 (143-218)||(47264192-47264267)
chr7 (1-210)||(6594920-6595130)
chr7 (1-210)||(32060671-32060881)
chr7 (143-219)||(44847618-44847694)
chr7 (34-109)||(1533012-1533087)
chr7 (143-218)||(2479885-2479960)
chr7 (33-218)||(18414090-18414275)
chr7 (144-218)||(1532884-1532958)
chr7 (143-210)||(12397418-12397485)
chr7 (33-218)||(18409214-18409399)
chr7 (160-210)||(79955-80005)
chr7 (33-109)||(1562403-1562479)
chr7 (143-210)||(1562513-1562580)
chr7 (1-88)||(18389127-18389215)
chr7 (53-109)||(25767381-25767437)
chr7 (160-211)||(46515808-46515860)
[»] chr3 (62 HSPs)
chr3 (1-219)||(2672417-2672635)
chr3 (1-211)||(8512611-8512821)
chr3 (1-218)||(32475855-32476072)
chr3 (1-218)||(32480713-32480930)
chr3 (1-211)||(8517491-8517701)
chr3 (1-211)||(24968488-24968698)
chr3 (1-218)||(2676574-2676791)
chr3 (1-210)||(18656812-18657022)
chr3 (1-210)||(22172669-22172878)
chr3 (31-210)||(40372263-40372442)
chr3 (1-210)||(28503326-28503535)
chr3 (31-210)||(8477816-8477995)
chr3 (31-210)||(7167696-7167875)
chr3 (32-210)||(28501159-28501337)
chr3 (31-124)||(8738616-8738709)
chr3 (31-124)||(9090854-9090947)
chr3 (1-109)||(27352189-27352298)
chr3 (31-124)||(2671158-2671251)
chr3 (33-210)||(54634717-54634894)
chr3 (1-210)||(4598889-4599100)
chr3 (1-210)||(4601110-4601321)
chr3 (160-221)||(21711768-21711829)
chr3 (33-210)||(6716092-6716269)
chr3 (160-218)||(27974433-27974491)
chr3 (160-218)||(39032017-39032075)
chr3 (143-220)||(37726224-37726301)
chr3 (160-220)||(27027273-27027333)
chr3 (160-220)||(27038608-27038668)
chr3 (33-112)||(6718374-6718453)
chr3 (1-205)||(10055817-10056023)
chr3 (1-205)||(10066927-10067133)
chr3 (160-210)||(30709266-30709316)
chr3 (160-210)||(36029659-36029709)
chr3 (53-218)||(1306439-1306604)
chr3 (33-205)||(10058039-10058212)
chr3 (33-205)||(10060261-10060434)
chr3 (33-205)||(10062483-10062656)
chr3 (33-205)||(10064705-10064878)
chr3 (1-109)||(25637121-25637230)
chr3 (143-219)||(26928079-26928155)
chr3 (143-218)||(23200654-23200729)
chr3 (143-218)||(37408036-37408111)
chr3 (169-220)||(1730906-1730957)
chr3 (143-218)||(23198455-23198530)
chr3 (1-210)||(3617041-3617251)
chr3 (160-210)||(16264896-16264946)
chr3 (160-205)||(40734087-40734132)
chr3 (400-492)||(6060700-6060792)
chr3 (53-218)||(800685-800850)
chr3 (1-210)||(10208785-10208996)
chr3 (1-210)||(10210985-10211196)
chr3 (53-218)||(33386137-33386302)
chr3 (160-211)||(40592251-40592302)
chr3 (160-210)||(8738549-8738599)
chr3 (160-210)||(9090787-9090837)
chr3 (143-181)||(9634818-9634856)
chr3 (160-218)||(32143870-32143928)
chr3 (160-210)||(35926057-35926106)
chr3 (160-218)||(40845221-40845279)
chr3 (160-210)||(48438782-48438832)
chr3 (143-218)||(7782637-7782712)
chr3 (160-204)||(27985971-27986015)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1-210)||(176457-176666)
[»] chr4 (38 HSPs)
chr4 (1-213)||(45347321-45347533)
chr4 (5-212)||(18856097-18856304)
chr4 (1-154)||(45356861-45357014)
chr4 (1-210)||(5733030-5733240)
chr4 (1-210)||(9223906-9224115)
chr4 (1-210)||(9228693-9228902)
chr4 (1-210)||(56141518-56141728)
chr4 (5-210)||(3814394-3814598)
chr4 (31-210)||(24742391-24742570)
chr4 (36-210)||(51520869-51521043)
chr4 (4-124)||(18712348-18712468)
chr4 (102-212)||(18860406-18860516)
chr4 (31-124)||(29761072-29761165)
chr4 (1-205)||(7122279-7122484)
chr4 (33-205)||(7124501-7124673)
chr4 (154-218)||(5143803-5143867)
chr4 (33-218)||(28467977-28468162)
chr4 (33-210)||(8392989-8393166)
chr4 (160-216)||(8689038-8689094)
chr4 (160-219)||(5148244-5148303)
chr4 (31-218)||(13992692-13992879)
chr4 (33-218)||(31495717-31495902)
chr4 (160-219)||(38151909-38151968)
chr4 (160-218)||(6742888-6742946)
chr4 (160-210)||(16628353-16628403)
chr4 (161-210)||(3778116-3778165)
chr4 (33-210)||(8395198-8395375)
chr4 (160-211)||(5268698-5268749)
chr4 (160-218)||(5396164-5396221)
chr4 (160-210)||(10047932-10047982)
chr4 (160-210)||(16622774-16622824)
chr4 (160-220)||(36314701-36314761)
chr4 (160-220)||(36328910-36328970)
chr4 (1-210)||(5135656-5135867)
chr4 (1-210)||(5137882-5138093)
chr4 (143-221)||(31985124-31985202)
chr4 (160-211)||(54867745-54867796)
chr4 (160-206)||(29761182-29761228)
[»] scaffold0464 (1 HSPs)
scaffold0464 (1-221)||(729-948)
[»] scaffold0355 (1 HSPs)
scaffold0355 (1-210)||(3344-3553)
[»] scaffold0135 (1 HSPs)
scaffold0135 (1-210)||(34561-34770)
[»] scaffold0674 (1 HSPs)
scaffold0674 (33-210)||(4126-4303)
[»] scaffold0665 (2 HSPs)
scaffold0665 (16-124)||(8091-8199)
scaffold0665 (160-210)||(8216-8266)
[»] scaffold0286 (1 HSPs)
scaffold0286 (33-218)||(21939-22124)
[»] scaffold0137 (1 HSPs)
scaffold0137 (1-210)||(5866-6077)
[»] scaffold0565 (1 HSPs)
scaffold0565 (1-210)||(2968-3178)
[»] scaffold0188 (1 HSPs)
scaffold0188 (33-219)||(17430-17616)
[»] scaffold1455 (1 HSPs)
scaffold1455 (143-212)||(1714-1783)
[»] scaffold0491 (2 HSPs)
scaffold0491 (33-219)||(11569-11754)
scaffold0491 (33-218)||(9124-9308)
[»] scaffold0087 (2 HSPs)
scaffold0087 (172-219)||(36323-36370)
scaffold0087 (143-220)||(43432-43509)
[»] scaffold0006 (3 HSPs)
scaffold0006 (160-211)||(6252-6303)
scaffold0006 (160-211)||(3060-3111)
scaffold0006 (161-218)||(132752-132809)
[»] scaffold0098 (2 HSPs)
scaffold0098 (160-220)||(45746-45806)
scaffold0098 (53-109)||(45658-45714)
[»] scaffold0510 (1 HSPs)
scaffold0510 (143-218)||(1083-1158)
[»] scaffold0140 (1 HSPs)
scaffold0140 (143-218)||(7911-7986)


Alignment Details
Target: scaffold0197 (Bit Score: 206; Significance: 1e-112; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 18880 - 18663
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  18880 atcgtgtcacgatttgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 18781  T
Q  101 gcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  18780 gcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttctcccaaaccacaaatt 18681  T
Q  201 tgaagccaattttcaaca 218  Q
    ||||||||||||||||||    
T  18680 tgaagccaattttcaaca 18663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #2
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 14000 - 13790
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    |||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  14000 atcgtgtcacgatctgcaacggtccccaagttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 13901  T
Q  101 gcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatt 200  Q
     ||||||||||||||||||||||||||||||||||||| | ||||||||||||| ||| |||||||||||||||||||||||||||||||||||| ||||    
T  13900 ccacgattttgcttccagcaaacttagctcactgcctccctgatcgtgtcacgactgcaaaatcgtgacacgattcctctgttctcccaaaccactaatt 13801  T
Q  201 tgaagccaatt 211  Q
    ||||| |||||    
T  13800 tgaagtcaatt 13790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 204; Significance: 1e-111; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 219 - 524
Target Start/End: Complemental strand, 41932815 - 41932504
Alignment:
Q  219 aagaccaagaatatctttgaatttgacaatggattcaagtctagcggcgatattttccaacttacaaaacatatctctttcttcaaagttgaaaaagcga 318  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41932815 aagaccaagaatatctttgaatttgagaatggattcaagtctagcggcgatattttccaacttacaaaacatatctctttcttcaaagttgaaaaagcga 41932716  T
Q  319 gagaagtagttaagagtactcacctgcttctccttgttctt---ggaaat---agaaactttagtagagatgtgatcgagagggtcgtcagctatataga 412  Q
    |||||||||||||||||||||||||||||||||||||||||    ||| |   || | ||||||||||||||||||| | |  ||| ||||| | |||||    
T  41932715 gagaagtagttaagagtactcacctgcttctccttgttcttccaagaagtagcagcagctttagtagagatgtgatccaaaatgtcatcagcaacataga 41932616  T
Q  413 gagcatctttgaggtcatcaagccagttgttaacagcagagtctttgacttgtttctgttcagcatcattaaggacagcttcaacagcataaagagtgtt 512  Q
     |||||||||||| ||||| ||||| ||||||||||||||||||||||  |||||||||||||||||||| | |||||||||||||||||||||||||||    
T  41932615 cagcatctttgagatcatcgagccatttgttaacagcagagtctttgaactgtttctgttcagcatcattcaagacagcttcaacagcataaagagtgtt 41932516  T
Q  513 cttcaacctttg 524  Q
    ||||||||||||    
T  41932515 cttcaacctttg 41932504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 31396706 - 31396487
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||| ||||| |||||||||||||||||||||||| |||||||    
T  31396706 atcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagagaaacttaaccaacaagtgtctgaatcgtgtcacgatttcccaagatcgtg 31396607  T
Q  101 gcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31396606 gcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatt 31396507  T
Q  201 tgaagccaattttcaacaaa 220  Q
    ||||||||||||||||||||    
T  31396506 tgaagccaattttcaacaaa 31396487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 31401563 - 31401346
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||| ||||||||||||||||| ||||||||||||||| |||||||    
T  31401563 atcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagagaaacttaagcagcaagtttctgaatcatgtcacgatttcccaagatcgtg 31401464  T
Q  101 gcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatt 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  31401463 gcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctattctcccaaaccacaaatt 31401364  T
Q  201 tgaagccaattttcaaca 218  Q
    ||||||||||||||||||    
T  31401363 tgaagccaattttcaaca 31401346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 182; E-Value: 4e-98
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 33768555 - 33768772
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  33768555 atcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 33768654  T
Q  101 gcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatt 200  Q
     |||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  33768655 ccacgattttgcttccagcaaacttggctcacggcatctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatt 33768754  T
Q  201 tgaagccaattttcaaca 218  Q
    ||||||||||||||||||    
T  33768755 tgaagccaattttcaaca 33768772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 182; E-Value: 4e-98
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 33791687 - 33791904
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  33791687 atcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 33791786  T
Q  101 gcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatt 200  Q
     |||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  33791787 ccacgattttgcttccagcaaacttggctcacggcatctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatt 33791886  T
Q  201 tgaagccaattttcaaca 218  Q
    ||||||||||||||||||    
T  33791887 tgaagccaattttcaaca 33791904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 178; E-Value: 9e-96
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 2785746 - 2785963
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    ||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  2785746 atcgtgtcacgatctgcaacgctccccaggttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 2785845  T
Q  101 gcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatt 200  Q
     |||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  2785846 ccacgattttgcttccagcaaacttggctcacggcatctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatt 2785945  T
Q  201 tgaagccaattttcaaca 218  Q
    ||||||||||||||||||    
T  2785946 tgaagccaattttcaaca 2785963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 28807292 - 28807082
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||    
T  28807292 atcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagagatacttaaccaacaagtttctggatcgtgtcacgatttcccaagatcgtg 28807193  T
Q  101 gcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatt 200  Q
     |||||||||||  || |||||||| |||||| || |||| ||||||||||||||||| |||||||||||||||||||||||||| ||| |||| |||||    
T  28807192 ccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgattgcaaaatcgtgacacgattcctctgttcttccagaccataaatt 28807093  T
Q  201 tgaagccaatt 211  Q
    |||||||||||    
T  28807092 tgaagccaatt 28807082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 5 - 209
Target Start/End: Complemental strand, 37561159 - 37560955
Alignment:
Q  5 tgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcac 104  Q
    |||||||||||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||    
T  37561159 tgtcacgatctgcaacggtccccaggttaaccagtccttatcagagatacttaaccagcaagtttctggatcgtgtcacgatttcccaagatcgtgccac 37561060  T
Q  105 gattttgcttccagc-aaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttga 203  Q
    || ||||| |||| | |||||| |||||| || |||| |||||||||||||||  ||||||||| ||||||| ||||||||| ||| |||||||||||||    
T  37561059 ga-tttgcctccatcaaaacttggctcacggcatctcagatcgtgtcacgattatcaaatcgtgtcacgattactctgttcttccagaccacaaatttga 37560961  T
Q  204 agccaa 209  Q
    ||||||    
T  37560960 agccaa 37560955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 15045064 - 15045272
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    |||||||||||||||||||||| ||||||| ||||||||| ||||||| |||||||||  |||||||||||||||||||||||||||||||| |||||||    
T  15045064 atcgtgtcacgatctgcaacggaccccaggttgaccagtccttatcagtgatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 15045163  T
Q  101 gcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatt 200  Q
     |||||||| || ||| |||||| | |||||| || ||||  |||||||||||||| | |||||||| ||||||| ||||||||| |||||| |||||||    
T  15045164 ccacgatttggcgtcctgcaaac-tggctcacggcatctcaaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccaaactacaaatt 15045262  T
Q  201 tgaagccaat 210  Q
    ||||||||||    
T  15045263 tgaagccaat 15045272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 37556341 - 37556133
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    ||||||||||||||||||||||||| | || | ||||||| ||||||||||||||||||||||||||||||  |||||||||| |||||||| |||||||    
T  37556341 atcgtgtcacgatctgcaacggtcctctggttaaccagtccttatcagagatacttaaccagcaagtttctagatcgtgtcacaatttcccaagatcgtg 37556242  T
Q  101 gcacgattttgcttccagc-aaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaat 199  Q
     ||||| ||||| |||| | |||||| |||||| || |||| ||||||||||||||| |||||||||| ||||||| ||||||||| ||| |||||||||    
T  37556241 ccacga-tttgcctccatcaaaacttggctcacggcatctcagatcgtgtcacgattaccaaatcgtgtcacgattactctgttcttccagaccacaaat 37556143  T
Q  200 ttgaagccaa 209  Q
    ||||||||||    
T  37556142 ttgaagccaa 37556133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 33 - 210
Target Start/End: Original strand, 27450225 - 27450402
Alignment:
Q  33 gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctcac 132  Q
    |||||||| ||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||| || ||| |||||| ||||||||    
T  27450225 gaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcac 27450323  T
Q  133 tgcctc-tccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
     ||| | |   |||||||||||||  | |||||||| ||||||| ||||||||| ||| ||||||||||||||||||||    
T  27450324 ggccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 27450402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 32 - 210
Target Start/End: Original strand, 30631763 - 30631941
Alignment:
Q  32 tgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctca 131  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||  |||||| |||||||| || ||| |||||| | |||||    
T  30631763 tgaccagtccttatcagagatacttaacgagcaagtttctgaatcgtgtcacgatttcccaaaatcgtgtcacgatttggcgtcctgcaaac-tggctca 30631861  T
Q  132 ctgcctctc-cgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
    | ||  |||   |||||||||||||  | |||||||| ||||||| ||||||||| ||| ||||||||||||||||||||    
T  30631862 cggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 30631941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 33 - 210
Target Start/End: Original strand, 27445382 - 27445559
Alignment:
Q  33 gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctcac 132  Q
    |||||||| ||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||| || ||| |||||| ||||||||    
T  27445382 gaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcac 27445480  T
Q  133 tgcctc-tccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
     ||| | |   |||||||||||||  | |||||||| ||||||| ||||||||| | | ||||||||||||||||||||    
T  27445481 ggccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttctagaccacaaatttgaagccaat 27445559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 3 - 210
Target Start/End: Complemental strand, 1456852 - 1456645
Alignment:
Q  3 cgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggc 102  Q
    ||||||||||| |||| | | ||| |||  ||| |||| ||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||| |    
T  1456852 cgtgtcacgatttgcatctgacccaaggtagacaagtccttatcagggatacttaacaagcaagtttctgaatcgtgtcacgatttcccaagatcgtgcc 1456753  T
Q  103 acgattttgcttccagcaaacttagctcactgcctc-tccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaattt 201  Q
    ||||||| || ||| | |||| |||||||| ||| | |   |||||||||||||  | |||||||| ||||||| ||||||||| ||| |||||||||||    
T  1456752 acgatttggcgtcctgtaaac-tagctcacggccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaattt 1456654  T
Q  202 gaagccaat 210  Q
    |||||||||    
T  1456653 gaagccaat 1456645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 33 - 210
Target Start/End: Original strand, 43599133 - 43599311
Alignment:
Q  33 gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctcac 132  Q
    |||||||| ||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||| || ||| |||||| ||||||||    
T  43599133 gaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcac 43599231  T
Q  133 tgcctc--tccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
     ||| |  |   ||||||||||||   | |||||||| ||||||| ||||||||| ||| ||||||||||||||||||||    
T  43599232 ggcccccttgaaatcgtgtcacgacgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 43599311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 33 - 210
Target Start/End: Original strand, 43604625 - 43604803
Alignment:
Q  33 gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctcac 132  Q
    |||||||| ||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||| || ||| |||||| ||||||||    
T  43604625 gaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcac 43604723  T
Q  133 tgcctc--tccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
     ||| |  |   ||||||||||||   | |||||||| ||||||| ||||||||| ||| ||||||||||||||||||||    
T  43604724 ggcccccttgaaatcgtgtcacgacgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 43604803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 33 - 210
Target Start/End: Original strand, 43610117 - 43610295
Alignment:
Q  33 gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctcac 132  Q
    |||||||| ||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||| || ||| |||||| ||||||||    
T  43610117 gaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcac 43610215  T
Q  133 tgcctc--tccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
     ||| |  |   ||||||||||||   | |||||||| ||||||| ||||||||| ||| ||||||||||||||||||||    
T  43610216 ggcccccttgaaatcgtgtcacgacgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 43610295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 42 - 210
Target Start/End: Complemental strand, 29402725 - 29402557
Alignment:
Q  42 ttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctcactgcctc-tc 140  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||| || ||| |||||| |||||||  ||| | |     
T  29402725 ttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcatggccacttg 29402627  T
Q  141 cgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
      |||||| ||||||  | |||||||| ||||||| ||||||||| ||| ||||||||||||||||||||    
T  29402626 aaatcgtgccacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 29402557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 16546433 - 16546223
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggat-gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgt 99  Q
    ||||||||||||| |||  | ||||| ||||  |||||||| ||||||  |||||||||| ||||||||||   ||||||||||||||| ||   |||||    
T  16546433 atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgt 16546334  T
Q  100 ggcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaat 199  Q
    | ||||| |||||  || |||| | |||||||| ||  |||| |||||||||||||| | |||||||| ||||||| | ||||||| |||||||||||||    
T  16546333 gtcacgaatttgcaccctgcaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccaaaccacaaat 16546234  T
Q  200 ttgaagccaat 210  Q
    |||||| ||||    
T  16546233 ttgaagacaat 16546223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 33 - 124
Target Start/End: Original strand, 43592688 - 43592779
Alignment:
Q  33 gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaact 124  Q
    |||||||| ||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||| || ||| |||||||    
T  43592688 gaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaact 43592779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 16544211 - 16544001
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggat-gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgt 99  Q
    ||||||||||||| |||  | ||||| ||||  |||||||| ||||||  |||||||||| ||||||||||   ||||||||||||||| ||   |||||    
T  16544211 atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgt 16544112  T
Q  100 ggcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaat 199  Q
    | ||||| |||||  || | || | |||||||| ||  |||| |||||||||||||| | |||||||| ||||||| | ||||||| |||||||||||||    
T  16544111 gtcacgaatttgcaccctgtaaccctagctcacagcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccaaaccacaaat 16544012  T
Q  200 ttgaagccaat 210  Q
    |||||| ||||    
T  16544011 ttgaagacaat 16544001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 40379895 - 40379685
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggat-gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgt 99  Q
    ||||||||||||| |||  | ||||| ||||  |||||||| ||||||  |||||||||| ||||||||||   ||||||||||||||| ||   |||||    
T  40379895 atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgt 40379796  T
Q  100 ggcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaat 199  Q
    | ||||| |||||  || |||| | |||||||| ||  |||| |||||||||||||| | |||||||| ||||||| | ||||||| ||| |||||||||    
T  40379795 gtcacgaatttgcaccctgcaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaat 40379696  T
Q  200 ttgaagccaat 210  Q
    |||||| ||||    
T  40379695 ttgaagacaat 40379685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 40382106 - 40381896
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggat-gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgt 99  Q
    ||||||||||||| |||  | ||||| ||||  |||||||| ||||||  |||||||||| ||||||||||   ||||||||||||||| ||   |||||    
T  40382106 atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgt 40382007  T
Q  100 ggcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaat 199  Q
    | ||||| |||||  || |||| | |||||||| ||  |||| |||||||||||||| | |||||||| ||||||| | |||||||  || |||||||||    
T  40382006 gtcacgaatttgcaccctgcaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttctttcagaccacaaat 40381907  T
Q  200 ttgaagccaat 210  Q
    |||||| ||||    
T  40381906 ttgaagacaat 40381896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 25077923 - 25077718
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggat-gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgt 99  Q
    ||||||||||||| |||  | ||||| ||||  |||||||| ||||||  |||||||||| |||||||||||| |||||||||||||||||||  |||||    
T  25077923 atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgt 25077824  T
Q  100 ggcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaat 199  Q
    | ||||||||     ||  ||| | |||||||| ||  |||| |||| ||||||||  | |||||||| ||||||| | ||||||| ||| |||||||||    
T  25077823 gacacgatttgcacccctacaaccctagctcacggcacctccaatcgcgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaat 25077724  T
Q  200 ttgaag 205  Q
    ||||||    
T  25077723 ttgaag 25077718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 25135892 - 25135687
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggat-gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgt 99  Q
    ||||||||||||| |||  | ||||| ||||  |||||||| ||||||  |||||||||| |||||||||||| |||||||||||||||||||  |||||    
T  25135892 atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgt 25135793  T
Q  100 ggcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaat 199  Q
    | ||||||||     ||  ||| | |||||||| ||  |||| |||| ||||||||  | |||||||| ||||||| | ||||||| ||| |||||||||    
T  25135792 gacacgatttgcacccctacaaccctagctcacggcacctccaatcgcgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaat 25135693  T
Q  200 ttgaag 205  Q
    ||||||    
T  25135692 ttgaag 25135687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 31180664 - 31180756
Alignment:
Q  32 tgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaact 124  Q
    ||||||||| ||||||| |||||||||| || |||| |||||||||||||||||||||||| ||||||| |||||||| || ||| |||||||    
T  31180664 tgaccagtccttatcagtgatacttaacgagaaagtctctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaact 31180756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 31 - 220
Target Start/End: Original strand, 24136297 - 24136486
Alignment:
Q  31 atgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctc 130  Q
    |||||||||| ||||||  |||||||||| |||||||||   |||||||||||||||||||| ||||||| |||||||| ||  || |||||| ||||||    
T  24136297 atgaccagtccttatcaaggatacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-tagctc 24136395  T
Q  131 actgcctctc-cgatcgtgtcacgattgccaaa-tcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaacaaa 220  Q
    || || || |   || ||||||||| ||||||| ||||| ||||||| || |||||| ||| |||||||||||||| |||| | ||||||||    
T  24136396 acggcatcacgaaattgtgtcacga-tgccaaattcgtgtcacgatttctgtgttcttccagaccacaaatttgaaaccaaatatcaacaaa 24136486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 14520796 - 14520856
Alignment:
Q  160 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaacaaa 220  Q
    |||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  14520796 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaattttcaacaaa 14520856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 33 - 218
Target Start/End: Complemental strand, 26177651 - 26177466
Alignment:
Q  33 gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctcac 132  Q
    |||||||| ||||||  || ||||||| |||||||||   |||||||||||||||||||| ||||||| |||||||| ||  || ||||||  |||||||    
T  26177651 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccatgatcgtgtcacgatttggcaccctgcaaac-cagctcac 26177553  T
Q  133 tgcctctc-cgatcgtgtcacgattgccaaa-tcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 218  Q
     || || |   |||||||||||| ||||||| ||||| ||||||| | ||||||| ||| ||||||||||||||||||| | ||||||    
T  26177552 ggcatcacgaaatcgtgtcacga-tgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 26177466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 33 - 210
Target Start/End: Original strand, 22536668 - 22536845
Alignment:
Q  33 gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctcac 132  Q
    |||||||| ||||||  |||||||||| ||||||||||   |||||||||||||||||||  || ||| |||||||||||  || || ||| ||||||||    
T  22536668 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaattgtgccacgattttgcaccctgc-aacctagctcac 22536766  T
Q  133 tgcctctccg--atcgtgtcacgattgcca-aatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
     | | | |||  |||||||||||| ||||| ||||||| ||||||| | ||||||| ||| ||||||||||||||| ||||    
T  22536767 -ggcaccccgaaatcgtgtcacga-tgccacaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 22536845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 33 - 218
Target Start/End: Original strand, 9789624 - 9789809
Alignment:
Q  33 gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctcac 132  Q
    |||||||| ||||||  || ||||||| |||||||||   ||||||||||||||||||||  |||||| |||||||| ||  || ||||||  |||||||    
T  9789624 gaccagtccttatcatggaaacttaacgagcaagttttcaaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcaaac-cagctcac 9789722  T
Q  133 tgcctctc-cgatcgtgtcacgattgccaaa-tcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 218  Q
     || || |   |||||||||||| ||||||| ||||| ||||||| | ||||||| ||| ||||||||||||||| ||| | ||||||    
T  9789723 ggcatcacgaaatcgtgtcacga-tgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 9789809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 33 - 218
Target Start/End: Original strand, 18442048 - 18442233
Alignment:
Q  33 gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctcac 132  Q
    |||||||| ||||||  || ||||||| |||||||||   ||||||||||||||||||||  |||||| |||||||| ||  || ||||||  |||||||    
T  18442048 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcaaac-cagctcac 18442146  T
Q  133 tgcctc-tccgatcgtgtcacgattgccaaa-tcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 218  Q
     || || |   |||||||||||| ||||||| ||||| ||||||| | ||||||| ||| ||||||||||||||| ||| | ||||||    
T  18442147 ggcatcatgaaatcgtgtcacga-tgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 18442233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 53 - 218
Target Start/End: Complemental strand, 16407806 - 16407641
Alignment:
Q  53 acttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctcactgcctctccga-tcgtgtca 151  Q
    ||||||| |||||||||   ||||||||||||||| | || ||||||| |||||||| ||  || ||||||  ||||||| || || |  | ||||||||    
T  16407806 acttaacgagcaagtttgcaaatcgtgtcacgattcctcaagatcgtgtcacgatttggcaccctgcaaacc-agctcacggcatcacaaaatcgtgtca 16407708  T
Q  152 cgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 218  Q
    ||||  | || ||||| ||||||| ||||||||| ||| ||||||||||||||||||| | ||||||    
T  16407707 cgatgtcaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatctcaaca 16407641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 33 - 210
Target Start/End: Complemental strand, 10593027 - 10592851
Alignment:
Q  33 gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctcac 132  Q
    |||||||| ||||||  |||||||||| ||||||||||   ||||||||||||||| ||   |||||| |||||||||||  || |||| || | |||||    
T  10593027 gaccagtccttatcacggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacgattttgcaccctgcaacct-atctcac 10592929  T
Q  133 tgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
     ||  |    |||||||||||||  | |||||||| ||||||| | ||||||| ||| ||||||||||||||| ||||    
T  10592928 ggcacccggaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 10592851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 53 - 218
Target Start/End: Complemental strand, 9352972 - 9352807
Alignment:
Q  53 acttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctcactgcctctccga-tcgtgtca 151  Q
    |||||||||||||||||   ||||||||||||||||| ||| |||||| ||||||||  |  || ||||||  ||||||| || |  |  | ||||||||    
T  9352972 acttaaccagcaagtttgaaaatcgtgtcacgatttcacagaatcgtgccacgatttgacaccctgcaaacc-agctcacggcattacaaaatcgtgtca 9352874  T
Q  152 cgattgcca-aatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 218  Q
    |||| |||| ||||| | ||||||| |||||||||  |||||||||||||||||||||| | ||||||    
T  9352873 cgat-gccacaatcgcgtcacgatttctctgttctttcaaaccacaaatttgaagccaaatctcaaca 9352807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 218
Target Start/End: Complemental strand, 29720153 - 29719965
Alignment:
Q  31 atgaccagtctttatcagagatacttaaccagcaagttt-ctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagct 129  Q
    |||||||||| ||||||  || ||||||| ||||||||| |  ||||||||||||||||||||  |||||| |||||||| ||  || ||| || |||||    
T  29720153 atgaccagtccttatcatggaaacttaacgagcaagtttgcacaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcagac-tagct 29720055  T
Q  130 cactgcctctc-cgatcgtgtcacgattgccaaa-tcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 218  Q
    ||| ||  | |   |||||||||||| ||||||| ||||| ||||||| | ||||||| ||| ||||||||||||||| ||| | ||||||    
T  29720054 cacggcaccacgaaatcgtgtcacga-tgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 29719965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 160 - 210
Target Start/End: Original strand, 31180773 - 31180823
Alignment:
Q  160 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
    |||||||| ||||||| ||||||||| ||| ||||||||||||||||||||    
T  31180773 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 31180823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 160 - 210
Target Start/End: Original strand, 43592797 - 43592847
Alignment:
Q  160 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
    |||||||| ||||||| ||||||||| ||| ||||||||||||||||||||    
T  43592797 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 43592847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 33 - 209
Target Start/End: Complemental strand, 26170542 - 26170366
Alignment:
Q  33 gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctcac 132  Q
    |||||||| ||||||  || ||||||| |||||||||   |||  ||||||||||||||| ||||||| |||||||| ||  || ||||||  |||||||    
T  26170542 gaccagtccttatcatggaaacttaacgagcaagtttgcaaattatgtcacgatttcccacgatcgtgtcacgatttggcaccctgcaaac-cagctcac 26170444  T
Q  133 tgcctctc-cgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaa 209  Q
     || || |   |||||||||||||  | || ||||| ||||||| | ||||||| ||| |||| ||||||||||||||    
T  26170443 ggcatcacaaaatcgtgtcacgataccaaattcgtgtcacgatttccctgttcttccataccataaatttgaagccaa 26170366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 31 - 88
Target Start/End: Original strand, 29751558 - 29751615
Alignment:
Q  31 atgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgattt 88  Q
    |||||||||| ||||||  |||||||||| ||||||||||  ||||||||||||||||    
T  29751558 atgaccagtccttatcaaggatacttaacgagcaagtttcacaatcgtgtcacgattt 29751615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 143 - 218
Target Start/End: Complemental strand, 16409152 - 16409077
Alignment:
Q  143 atcgtgtcacgattgccaaat-cgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 218  Q
    ||||||||||||| ||||||| |||| ||||||| |||||||||  || ||||||||||||||||||| | ||||||    
T  16409152 atcgtgtcacgat-gccaaattcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaaatctcaaca 16409077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 143 - 206
Target Start/End: Complemental strand, 36931918 - 36931855
Alignment:
Q  143 atcgtgtcacgattgccaaat-cgtgacacgattcctctgttctcccaaaccacaaatttgaagc 206  Q
    |||||| |||||| ||||||| |||| ||||||| ||||||||| ||||||||||||||||||||    
T  36931918 atcgtgccacgat-gccaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagc 36931855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 33 - 109
Target Start/End: Original strand, 38219845 - 38219921
Alignment:
Q  33 gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattt 109  Q
    |||||||| ||||||  || ||||||| |||||||||   ||||||||||| |||||||| ||||||| ||||||||    
T  38219845 gaccagtccttatcatggaaacttaacaagcaagtttgaaaatcgtgtcacaatttcccaagatcgtgtcacgattt 38219921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 218
Target Start/End: Original strand, 15465050 - 15465125
Alignment:
Q  143 atcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 218  Q
    |||||||||||||  | || ||||| ||||||| |||||||||  || ||||||||||||||||||| | ||||||    
T  15465050 atcgtgtcacgataccaaattcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaaatctcaaca 15465125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 143 - 181
Target Start/End: Complemental strand, 25412434 - 25412396
Alignment:
Q  143 atcgtgtcacgattgccaaatcgtgacacgattcctctg 181  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  25412434 atcgtgtcacgattgccaaatcgtgtcacgatttctctg 25412396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 31004703 - 31004657
Alignment:
Q  160 aaatcgtgacacgattcc-tctgttctcccaaaccacaaatttgaag 205  Q
    |||||||||||||||| | |||||||||||||| |||||||||||||    
T  31004703 aaatcgtgacacgatttcatctgttctcccaaaacacaaatttgaag 31004657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 11916502 - 11916453
Alignment:
Q  160 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaa 209  Q
    |||| ||| ||||||| |||||||||  ||||||||||||||||||||||    
T  11916502 aaattgtgtcacgatttctctgttctttcaaaccacaaatttgaagccaa 11916453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 143 - 218
Target Start/End: Complemental strand, 29722227 - 29722152
Alignment:
Q  143 atcgtgtcacgattgccaaat-cgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 218  Q
    ||||||||||||| ||||||| |||| ||||||| | ||||||| ||| ||||||||||||||| ||| | ||||||    
T  29722227 atcgtgtcacgat-gccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 29722152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 143 - 218
Target Start/End: Original strand, 29752315 - 29752390
Alignment:
Q  143 atcgtgtcacgattgccaaa-tcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 218  Q
    |||||||||||| ||||||| ||||| ||||||| | ||||||| ||| ||||||||||||||| ||| | ||||||    
T  29752315 atcgtgtcacga-tgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 29752390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 182; Significance: 4e-98; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 182; E-Value: 4e-98
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 33330149 - 33329932
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  33330149 atcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 33330050  T
Q  101 gcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatt 200  Q
     |||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  33330049 ccacgattttgcttccagcaaacttggctcacggcatctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatt 33329950  T
Q  201 tgaagccaattttcaaca 218  Q
    ||||||||||||||||||    
T  33329949 tgaagccaattttcaaca 33329932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 178; E-Value: 9e-96
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 16839114 - 16839331
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    |||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  16839114 atcgtgtcacgatctgcaacggtcccaaggttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 16839213  T
Q  101 gcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatt 200  Q
     |||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  16839214 ccacgattttgcttccagcaaacttggctcacggcatctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatt 16839313  T
Q  201 tgaagccaattttcaaca 218  Q
    ||||||||||||||||||    
T  16839314 tgaagccaattttcaaca 16839331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 178; E-Value: 9e-96
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 33335646 - 33335429
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  33335646 atcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 33335547  T
Q  101 gcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatt 200  Q
     |||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||    
T  33335546 ccacgattttgcttccagcaaacttggctcacggcatctccgatcgtgtcacgattgccaaatcgcgaaacgattcctctgttcttccaaaccacaaatt 33335447  T
Q  201 tgaagccaattttcaaca 218  Q
    ||||||||||||||||||    
T  33335446 tgaagccaattttcaaca 33335429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 6005790 - 6006009
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  6005790 atcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 6005889  T
Q  101 gcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatt 200  Q
     |||||||||||||||||||||||| |||||  || ||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||    
T  6005890 ccacgattttgcttccagcaaacttggctcatggcatctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgtttttccaaaccacaaatt 6005989  T
Q  201 tgaagccaattttcaacaaa 220  Q
    ||||||||||||||||||||    
T  6005990 tgaagccaattttcaacaaa 6006009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 5343848 - 5344058
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    ||||||||||||| |||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  5343848 atcgtgtcacgatatgcaacggtccccaagttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 5343947  T
Q  101 gcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatt 200  Q
     ||||||||||||| ||| | |||| ||||||| |||| | ||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||    
T  5343948 tcacgattttgctttcagaagacttggctcacttcctccctgatcgtgtcacgatgaccaaatcgtgacacgatttctctgttctcccaaaccacaaatt 5344047  T
Q  201 tgaagccaatt 211  Q
    |||||||||||    
T  5344048 tgaagccaatt 5344058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 6438867 - 6439078
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    ||||||||||||||||||||||| |||||| ||||||||| ||||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  6438867 atcgtgtcacgatctgcaacggttcccaggttgaccagtccttatcagtgatacttaactagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 6438966  T
Q  101 gcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatt 200  Q
     ||||||| ||| |||||||||||| |||||| ||  |||| |||||||||||||| | |||||||| ||||||| || |||||| ||| |||| |||||    
T  6438967 ccacgattatgcatccagcaaacttggctcacggcacctccaatcgtgtcacgattccaaaatcgtgtcacgatttctatgttcttccagaccataaatt 6439066  T
Q  201 tgaagccaattt 212  Q
    ||||||||||||    
T  6439067 tgaagccaattt 6439078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 28155287 - 28155130
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  28155287 atcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagagatacttaaccagcaagtttctggatcgtgtcacgatttcccaagatcgtg 28155188  T
Q  101 gcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgc 158  Q
     |||||||||||  || |||||||| |||||| || |||| |||||||||||||||||    
T  28155187 ccacgattttgcaccctgcaaacttggctcacggcatctcagatcgtgtcacgattgc 28155130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 14742142 - 14741933
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    |||||||||||||||||||||| ||| ||| |||| |||| ||||||| |||||||||| |||||||||||||||||||||||||||| ||| |||||||    
T  14742142 atcgtgtcacgatctgcaacggacccaaggttgacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtg 14742043  T
Q  101 gcacgattttgcttccagcaaacttagctcactgcctc-tccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaat 199  Q
     |||||||| || ||| |||||| ||||||||  || | |   |||||||||||||  | |||||||| ||||||| ||||||||| ||| |||||||||    
T  14742042 ccacgatttggcgtcctgcaaac-tagctcacgaccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaat 14741944  T
Q  200 ttgaagccaat 210  Q
    |||||||||||    
T  14741943 ttgaagccaat 14741933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 11857351 - 11857560
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    ||||||||||||| |||||||| ||| ||| |||| |||| ||||||| | |||||||| ||||||||||| |||||||||||||||||||| |||||||    
T  11857351 atcgtgtcacgatttgcaacggacccaaggttgacaagtccttatcagtgttacttaacgagcaagtttctaaatcgtgtcacgatttcccaagatcgtg 11857450  T
Q  101 gcacgattttgcttccagcaaacttagctcactgcctc-tccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaat 199  Q
     |||||||| || ||| |||||| |||||||| ||| | |   |||||||||||||  | |||||||| ||||||| ||||||||| ||| |||||||||    
T  11857451 ccacgatttggcgtcctgcaaac-tagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaat 11857549  T
Q  200 ttgaagccaat 210  Q
    |||||||||||    
T  11857550 ttgaagccaat 11857560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 22010405 - 22010196
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    ||||||||||||| |||||||| ||| |||  ||| |||| ||||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  22010405 atcgtgtcacgatttgcaacggacccaaggtagacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 22010306  T
Q  101 gcacgattttgcttccagcaaacttagctcactgcctc-tccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaat 199  Q
     |||||||| || ||| |||||| || || || ||| | |   |||||||||||||  | |||||||| ||||||| ||||||||| ||| |||||||||    
T  22010305 ccacgatttggcgtcctgcaaac-taacttacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaat 22010207  T
Q  200 ttgaagccaat 210  Q
    |||||||||||    
T  22010206 ttgaagccaat 22010196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 14737282 - 14737159
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    |||||||||||||||||||||| ||| ||| |||| |||| ||||||| |||||||||| |||||||||||||||||||||||||||| ||| |||||||    
T  14737282 atcgtgtcacgatctgcaacggacccaaggttgacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtg 14737183  T
Q  101 gcacgattttgcttccagcaaact 124  Q
     |||||||| || ||| |||||||    
T  14737182 ccacgatttggcgtcctgcaaact 14737159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 50 - 210
Target Start/End: Complemental strand, 30125185 - 30125025
Alignment:
Q  50 gatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctcactgcctctc-cgatcgtg 148  Q
    |||||||||| ||||||||||||||||||||||||||||||||  |||||| |||||||| || ||| |||||| |||||||| ||  |||   ||||||    
T  30125185 gatacttaacgagcaagtttctgaatcgtgtcacgatttcccaaaatcgtgccacgatttggcgtcctgcaaac-tagctcacggcacctcgaaatcgtg 30125087  T
Q  149 tcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
    |||||||  | |||||||| ||||||| ||||||||| ||| ||||||||||||||||||||    
T  30125086 tcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 30125025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 33 - 210
Target Start/End: Original strand, 6136363 - 6136540
Alignment:
Q  33 gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctcac 132  Q
    |||||||| ||||||  |||||||||| |||||||||||| |||||||||||||||||||  |||||| |||||||||    || |||| | ||||||||    
T  6136363 gaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgattttcacccctgcaaccctagctcac 6136462  T
Q  133 tgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
     || ||    |||||||| ||||| | |||||||| ||||||| | ||||||| ||||||||||||||||||| ||||    
T  6136463 ggcatccgaaatcgtgtctcgattccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaat 6136540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 31 - 124
Target Start/End: Original strand, 5266486 - 5266579
Alignment:
Q  31 atgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaact 124  Q
    |||||||||| ||||||  |||||||||  |||||||||||||||||||||||||||||||| ||||||| |||||||| || ||| |||||||    
T  5266486 atgaccagtccttatcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaact 5266579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 31 - 219
Target Start/End: Complemental strand, 5674416 - 5674228
Alignment:
Q  31 atgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctc 130  Q
    |||||||||| ||||||  |||||||||| ||||||||||  |||||||||||||||||||| ||| ||| |||||||| ||  || ||||||  |||||    
T  5674416 atgaccagtccttatcacggatacttaacgagcaagtttcaaaatcgtgtcacgatttcccaagattgtgtcacgatttggcaccctgcaaac-cagctc 5674318  T
Q  131 actgcctctc-cgatcgtgtcacgattgccaaa-tcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaacaa 219  Q
    || || || |   ||| |||||||| ||||||| || || ||||||| ||||||||| ||| ||||||||||||||||||| | |||||||    
T  5674317 acggcatcacaaaatcatgtcacga-tgccaaattcatgtcacgatttctctgttcttccagaccacaaatttgaagccaactatcaacaa 5674228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 33 - 218
Target Start/End: Original strand, 22709460 - 22709645
Alignment:
Q  33 gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctcac 132  Q
    |||||||| ||||||  || ||||||| |||||||||   |||||||||||||||||||| ||||||| |||||||| ||  || ||||||  ||||||     
T  22709460 gaccagtccttatcatggaaacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctcat 22709558  T
Q  133 tgcctctc-cgatcgtgtcacgattgccaaa-tcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 218  Q
     || || |   ||||||||||| |||||||| ||||| || |||| ||||||||| ||| ||||||||||||||||||| | ||||||    
T  22709559 ggcatcacaaaatcgtgtcacg-ttgccaaattcgtgtcatgatttctctgttcttccagaccacaaatttgaagccaaatctcaaca 22709645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 33 - 210
Target Start/End: Original strand, 16578917 - 16579094
Alignment:
Q  33 gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctcac 132  Q
    |||||||| ||||||  |||||||||| ||||||||||   ||||||||||||||| ||   |||||| |||||||||||  || || ||| ||||||||    
T  16578917 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacgattttgcaccctgc-aacctagctcac 16579015  T
Q  133 tgcctctccg--atcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
     | | | |||  |||||||||||||  | |||||||| ||||||| | ||||||| ||| ||||||||||||||| ||||    
T  16579016 -ggcaccccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 16579094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 33 - 210
Target Start/End: Complemental strand, 16616463 - 16616286
Alignment:
Q  33 gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctcac 132  Q
    |||||||| ||||||  |||||||||| ||||||||||   ||||||||||||||| ||   |||||| |||||||||||  || |||| || |||||||    
T  16616463 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacgattttgcaccctgcaacct-agctcac 16616365  T
Q  133 tgcctctccga--tcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
     ||  | ||||  ||||||||||||  | |||||||| ||||||| | ||||||| ||| ||||||||||||||| ||||    
T  16616364 ggcacc-ccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 16616286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 33342470 - 33342681
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggat-gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccag-gatcg 98  Q
    ||||||||||||| |||  | ||||| ||||  |||||||| ||||||  |||||||||| |||||||||||  ||||||||||||||||||||  ||||    
T  33342470 atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgatttcccagaaatcg 33342569  T
Q  99 tggcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaa 198  Q
    || ||||||||     || |||| | |||||||| || ||    |||| ||| ||||  | |||||||| ||||||| |  |||||| ||||||||||||    
T  33342570 tgccacgatttgcacccctgcaaccctagctcacggcatccgaaatcgcgtcgcgatcccaaaatcgtgtcacgatttccatgttcttccaaaccacaaa 33342669  T
Q  199 tttgaagccaat 210  Q
    ||||||| ||||    
T  33342670 tttgaagacaat 33342681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 33 - 205
Target Start/End: Complemental strand, 34166851 - 34166678
Alignment:
Q  33 gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacga-tttcccaggatcgtggcacgattttgcttccagcaaacttagctca 131  Q
    |||||||| ||||||  |||||||||| |||||||||||  |||||||||||| |||||||  |||||| ||||||||     || |||| | || ||||    
T  34166851 gaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaaccctaactca 34166752  T
Q  132 ctgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaag 205  Q
    | || ||    |||| ||||||||  | |||||||| ||||||| | ||||||| |||||||||||||||||||    
T  34166751 cggcatccgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 34166678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 5017026 - 5016966
Alignment:
Q  160 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaacaaa 220  Q
    |||||||| |||||||  |||||||| |||||||||||||||||||||||||  |||||||    
T  5017026 aaatcgtgtcacgatttttctgttcttccaaaccacaaatttgaagccaattaacaacaaa 5016966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 33 - 205
Target Start/End: Complemental strand, 27647652 - 27647480
Alignment:
Q  33 gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctcac 132  Q
    ||||||||  |||||  |||||||||| ||||||||||   |||||||||||||||| ||  |||||| |||||||||||  || || ||| ||||||||    
T  27647652 gaccagtcaatatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttctcacaatcgtgccacgattttgcaccctgc-aacctagctcac 27647554  T
Q  133 tgcctctccg--atcgtgtcacgattgcca-aatcgtgacacgattcctctgttctcccaaaccacaaatttgaag 205  Q
     | | | |||  |||||||||||| ||||| ||||||| ||||||| | ||||||| ||| |||||||||||||||    
T  27647553 -ggcaccccgaaatcgtgtcacga-tgccacaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 27647480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 53 - 218
Target Start/End: Original strand, 2171939 - 2172104
Alignment:
Q  53 acttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctcactgcctctc-cgatcgtgtca 151  Q
    ||||||| |||||||||   |||||||||||||||||||| ||||||| |||||||| ||  || ||||||  ||||||| || || |   |||||||||    
T  2171939 acttaacgagcaagttttacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctcacggcatcacgaaatcgtgtca 2172037  T
Q  152 cgattgccaaa-tcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 218  Q
    ||| ||||||| || || | ||||| ||||||||| ||| |||||||||||||| |||| | ||||||    
T  2172038 cga-tgccaaattcatgtcccgatttctctgttcttccagaccacaaatttgaaaccaaatctcaaca 2172104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 143 - 218
Target Start/End: Original strand, 23896882 - 23896957
Alignment:
Q  143 atcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 218  Q
    |||||||||||||  | |||||||| |||||||  ||||||||  |||||||||||||||||| ||| ||||||||    
T  23896882 atcgtgtcacgatgccaaaatcgtgtcacgatttttctgttctttcaaaccacaaatttgaaggcaaatttcaaca 23896957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 160 - 218
Target Start/End: Original strand, 24714938 - 24714997
Alignment:
Q  160 aaatcgtgacacgattcctctgttctcccaaaccac-aaatttgaagccaattttcaaca 218  Q
    |||||||| ||||||| ||||||| | ||||||||| |||||||||||||||||||||||    
T  24714938 aaatcgtgtcacgatttctctgtttttccaaaccacaaaatttgaagccaattttcaaca 24714997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 160 - 211
Target Start/End: Complemental strand, 31086003 - 31085952
Alignment:
Q  160 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaatt 211  Q
    |||||||| ||||||| ||||||||| | |||||||||||||||||||||||    
T  31086003 aaatcgtgtcacgatttctctgttcttctaaaccacaaatttgaagccaatt 31085952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 160 - 210
Target Start/End: Original strand, 5266596 - 5266646
Alignment:
Q  160 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
    |||||||| ||||||| ||||||||| ||| ||||||||||||||||||||    
T  5266596 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 5266646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 13151067 - 13150957
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggat-gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacga-tttcccaggatcg 98  Q
    ||||||||||||| |||  | ||||| ||||  |||||||| ||||||  |||||||||| |||||||||||  |||||||||||| |||||||  ||||    
T  13151067 atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcg 13150968  T
Q  99 tggcacgattt 109  Q
    || ||||||||    
T  13150967 tgtcacgattt 13150957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 160 - 210
Target Start/End: Complemental strand, 14737142 - 14737092
Alignment:
Q  160 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
    |||||||| ||||||| ||||||||| ||| ||||||||||||||||||||    
T  14737142 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 14737092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 34164662 - 34164552
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggat-gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacga-tttcccaggatcg 98  Q
    ||||||||||||| |||  | ||||| ||||  |||||||| ||||||  |||||||||| |||||||||||  |||||||||||| |||||||  ||||    
T  34164662 atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcg 34164563  T
Q  99 tggcacgattt 109  Q
    || ||||||||    
T  34164562 tgacacgattt 34164552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 6027051 - 6026942
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggat-gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgt 99  Q
    ||||||||||||| |||  | ||||| ||||  |||| ||| ||||||  |||||||||| |||||||||||| ||||||||||||||| ||   |||||    
T  6027051 atcgtgtcacgatttgcgtccgtcccaaggaacgaccggtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgt 6026952  T
Q  100 ggcacgattt 109  Q
    | ||||||||    
T  6026951 gccacgattt 6026942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 109
Target Start/End: Complemental strand, 411873 - 411794
Alignment:
Q  31 atgaccagtctttatcagagatacttaaccagcaagttt-ctgaatcgtgtcacgatttcccaggatcgtggcacgattt 109  Q
    |||||||||| ||||||  || ||||||| ||||||||| |  ||||||||||||||||||||  |||||| ||||||||    
T  411873 atgaccagtccttatcatggaaacttaacgagcaagtttgcacaatcgtgtcacgatttcccacaatcgtgtcacgattt 411794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 31 - 109
Target Start/End: Original strand, 3073156 - 3073234
Alignment:
Q  31 atgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattt 109  Q
    |||||||||| ||||||  || ||||||| |||||||||   |||||||||||||||||| |  |||||| ||||||||    
T  3073156 atgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttccaacaatcgtgtcacgattt 3073234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 5571806 - 5571761
Alignment:
Q  160 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaag 205  Q
    |||||||| ||||||| |||| |||||||||| |||||||||||||    
T  5571806 aaatcgtgtcacgatttctctattctcccaaaacacaaatttgaag 5571761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 143 - 219
Target Start/End: Original strand, 6097911 - 6097987
Alignment:
Q  143 atcgtgtcacgattgccaaa-tcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaacaa 219  Q
    |||||||||||| ||||||| ||||| || |||| | ||||||| ||||||||||||||||||| ||| | |||||||    
T  6097911 atcgtgtcacga-tgccaaattcgtgtcaggatttccctgttcttccaaaccacaaatttgaagacaaatctcaacaa 6097987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 210
Target Start/End: Complemental strand, 25420981 - 25420804
Alignment:
Q  33 gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctcac 132  Q
    |||||||| ||||||  |||||||||| ||||||||||   ||||||||||||||| ||   |||||| ||||||||     || |||| | ||||||||    
T  25420981 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacgatttgcacccctgcaaccctagctcac 25420882  T
Q  133 tgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
     || ||    ||||||||||| |  | |||| ||| ||||||| | ||||||| ||| ||||||||||||||| ||||    
T  25420881 ggcatccgaaatcgtgtcacggtcccaaaattgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 25420804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 143 - 175
Target Start/End: Original strand, 24399579 - 24399611
Alignment:
Q  143 atcgtgtcacgattgccaaatcgtgacacgatt 175  Q
    ||||||||||||| |||||||||||||||||||    
T  24399579 atcgtgtcacgatggccaaatcgtgacacgatt 24399611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 143 - 175
Target Start/End: Original strand, 24409699 - 24409731
Alignment:
Q  143 atcgtgtcacgattgccaaatcgtgacacgatt 175  Q
    ||||||||||||| |||||||||||||||||||    
T  24409699 atcgtgtcacgatggccaaatcgtgacacgatt 24409731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 180; Significance: 6e-97; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 180; E-Value: 6e-97
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 43988165 - 43987946
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    ||||||||||||| |||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  43988165 atcgtgtcacgatatgcaacggtccccaagttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttaccaagatcgtg 43988066  T
Q  101 gcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatt 200  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  43988065 gcacgattttgcttccagcaaacttggctcactgcctctctgatcgtgtcacgattgccaaatcgcgacacgattcctctgctctcccaaaccacaaatt 43987966  T
Q  201 tgaagccaattttcaacaaa 220  Q
    ||||||||||||||||||||    
T  43987965 tgaagccaattttcaacaaa 43987946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 44023593 - 44023382
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  44023593 atcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 44023494  T
Q  101 gcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatt 200  Q
     ||||||||||| |||||||||||| |||||| ||  |||| |||||||||||||| | |||||||| ||||||| ||||||||| ||| ||||||||||    
T  44023493 ccacgattttgcatccagcaaacttggctcacggcacctccaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatt 44023394  T
Q  201 tgaagccaattt 212  Q
    ||||||||||||    
T  44023393 tgaagccaattt 44023382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 25439615 - 25439405
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    |||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  25439615 atcgtgtcacgatctgcaacagtccccaggttgaccagtccttatcagagatacttaaccagcaagtttctggatcgtgtcacgatttcccaagatcgtg 25439516  T
Q  101 gcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatt 200  Q
     ||||||||||| ||| |||||||| |||||| || ||||  |||||||||||||| |||||||||| ||||||| ||||||||| ||| ||||||||||    
T  25439515 ccacgattttgcatcctgcaaacttggctcacggcatctcaaatcgtgtcacgattaccaaatcgtgtcacgattgctctgttcttccagaccacaaatt 25439416  T
Q  201 tgaagccaatt 211  Q
    |||||||||||    
T  25439415 tgaagccaatt 25439405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 25444808 - 25444598
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    |||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||    
T  25444808 atcgtgtcacgatctgcaacggtccctaggttgaccagtccttatcagagatacttaaccaacaagtttctggatcgtgtcacgatttcccaagatcgtg 25444709  T
Q  101 gcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatt 200  Q
     ||||||||||| |||  ||||||| |||||| || ||||  |||||||||||||| |||||||||| ||||||| ||||||||| ||| ||||||||||    
T  25444708 ccacgattttgcatcctacaaacttggctcacggcatctcaaatcgtgtcacgattaccaaatcgtgtcacgattgctctgttcttccagaccacaaatt 25444609  T
Q  201 tgaagccaatt 211  Q
    |||||||||||    
T  25444608 tgaagccaatt 25444598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 1054730 - 1054519
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    ||||||||||||||||||||||| |||||| ||||||||| ||||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  1054730 atcgtgtcacgatctgcaacggttcccaggttgaccagtccttatcagtgatacttaactagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 1054631  T
Q  101 gcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatt 200  Q
     |||||||| || ||| |||||||| |||||| ||  |||| ||||| |||||||| | |||||||||||||||| ||||||||| ||| ||||||||||    
T  1054630 ccacgatttggcgtcctgcaaacttggctcacggcacctccaatcgtatcacgattccaaaatcgtgacacgatttctctgttcttccagaccacaaatt 1054531  T
Q  201 tgaagccaattt 212  Q
    ||||||||||||    
T  1054530 tgaagccaattt 1054519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 39445866 - 39446077
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||||| |||||||||||| ||||||||| ||||||||| |||||||    
T  39445866 atcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagtgatacttaacgagcaagtttctggatcgtgtcatgatttcccaagatcgtg 39445965  T
Q  101 gcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatt 200  Q
     |||||||| || ||| |||||||| |||||| || ||||  |||||||||||||| | |||||||| ||||||| ||||||||| ||| ||||||||||    
T  39445966 ccacgatttggcgtcctgcaaacttggctcacggcatctcaaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatt 39446065  T
Q  201 tgaagccaattt 212  Q
    ||||||||||||    
T  39446066 tgaagccaattt 39446077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 41390970 - 41391177
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    |||||||||||||||||| ||| ||||||| ||||||||| ||||||| |||||||||  |||||||||||||||| ||||||||||||||| |||||||    
T  41390970 atcgtgtcacgatctgcagcggaccccaggttgaccagtccttatcagtgatacttaatgagcaagtttctgaatcatgtcacgatttcccaagatcgtg 41391069  T
Q  101 gcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatt 200  Q
     |||||||| || ||| |||||| | |||||| || ||||  |||||||||||||| | |||||||| ||||||| ||||||||| ||| ||||||||||    
T  41391070 ccacgatttggcgtcctgcaaac-tggctcacggcatctcaaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatt 41391168  T
Q  201 tgaagccaa 209  Q
    |||||||||    
T  41391169 tgaagccaa 41391177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 41398625 - 41398779
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    |||||||||||||||||| ||| ||||||| ||||||||| ||||||  |||||||||  |||||||||||||||||||||||||||||||| |||||||    
T  41398625 atcgtgtcacgatctgcagcggaccccaggttgaccagtccttatcaatgatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 41398724  T
Q  101 gcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgatt 156  Q
     |||||||| || ||| |||||| | |||||| || ||||  ||||||||||||||    
T  41398725 ccacgatttggcgtcctgcaaac-tggctcacggcatctcaaatcgtgtcacgatt 41398779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 44203435 - 44203225
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggat-gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgt 99  Q
    ||||||||||||| |||  | ||||| ||||  |||||||| ||||||  |||||||||| |||||||||||| ||||||||||||||| ||   |||||    
T  44203435 atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgt 44203336  T
Q  100 ggcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaat 199  Q
    | ||||||||     || |||| | |||||||| ||  |||| |||||||||||||| | |||||||| ||||||| | ||||||| ||| |||||||||    
T  44203335 gccacgatttgcacccctgcaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtgtcacgatttccctgttcttccagaccacaaat 44203236  T
Q  200 ttgaagccaat 210  Q
    |||||| ||||    
T  44203235 ttgaagacaat 44203225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 24787010 - 24786918
Alignment:
Q  32 tgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaact 124  Q
    ||||||||| ||||||  |||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||| || ||| |||||||    
T  24787010 tgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaact 24786918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 24793832 - 24793740
Alignment:
Q  32 tgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaact 124  Q
    ||||||||| ||||||  |||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||| || ||| |||||||    
T  24793832 tgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaact 24793740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 31 - 218
Target Start/End: Original strand, 20622634 - 20622821
Alignment:
Q  31 atgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctc 130  Q
    |||||||||| ||||||  |||||||||| ||||||||||  ||||||||||||||||||||  |||||| |||||||| ||  || ||| || ||||||    
T  20622634 atgaccagtccttatcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcagac-tagctc 20622732  T
Q  131 actgcctctc-cgatcgtgtcacgattgccaaa-tcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 218  Q
    || ||  | |   |||||||||||| ||||||| ||||| ||||||| | ||||||| ||| ||||||||||||||| ||| | ||||||    
T  20622733 acggcaccacgaaatcgtgtcacga-tgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 20622821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 53 - 218
Target Start/End: Complemental strand, 19361077 - 19360912
Alignment:
Q  53 acttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctcactgcctctc-cgatcgtgtca 151  Q
    ||||||| |||||||||   |||||||||||||||||||| ||||||| |||||||| ||  || ||||||  ||||||| || || |   |||||||||    
T  19361077 acttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctcacggcatcacaaaatcgtgtca 19360979  T
Q  152 cgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 218  Q
    ||||  | || ||||| ||||||| |||||||||  || ||||||||||||||||||| | ||||||    
T  19360978 cgataccaaattcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaaatctcaaca 19360912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 160 - 218
Target Start/End: Original strand, 37070334 - 37070392
Alignment:
Q  160 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 218  Q
    |||||||| ||||||| ||||||||| |||||||||||||||||| |||||||||||||    
T  37070334 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaaaccaattttcaaca 37070392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 31 - 219
Target Start/End: Complemental strand, 51765177 - 51764989
Alignment:
Q  31 atgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctc 130  Q
    |||||||||| ||||||  || ||||||| |||||||||   ||||||||||||||| | || ||||||| |||||||| ||  || ||||||  |||||    
T  51765177 atgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattcctcaagatcgtgtcacgatttggcaccctgcaaacc-agctc 51765079  T
Q  131 actgcctctccga-tcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaacaa 219  Q
    || || || |  | ||||||||||||  | || ||||| ||||||| ||||||||| ||| ||||||||||| ||||||| | |||||||    
T  51765078 acggcatcacgaaatcgtgtcacgatgtcaaattcgtgtcacgatttctctgttcttccagaccacaaatttaaagccaaatctcaacaa 51764989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 21536170 - 21536110
Alignment:
Q  160 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaacaaa 220  Q
    |||||||| ||||||| ||||||||| ||||||||||||||||||||||| || |||||||    
T  21536170 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaattacaacaaa 21536110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 160 - 211
Target Start/End: Original strand, 13598967 - 13599018
Alignment:
Q  160 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaatt 211  Q
    |||||||| ||||||| ||||||||| |||||||||||||||||||||||||    
T  13598967 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatt 13599018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 143 - 218
Target Start/End: Complemental strand, 26644448 - 26644373
Alignment:
Q  143 atcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 218  Q
    ||||||| |||||  | |||||||  ||||||||||||||||| ||||||||||||||| ||||||||||| ||||    
T  26644448 atcgtgttacgatgacaaaatcgtatcacgattcctctgttcttccaaaccacaaatttaaagccaatttttaaca 26644373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 55 - 218
Target Start/End: Complemental strand, 19365931 - 19365768
Alignment:
Q  55 ttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctcactgcctctc-cgatcgtgtcacg 153  Q
    ||||| |||||||||   |||||||||||||||||||| ||||||| |||||||| ||  || ||||||  ||||||| || || |   |||||||||||    
T  19365931 ttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctcacggcatcacaaaatcgtgtcacg 19365833  T
Q  154 attgccaaa-tcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 218  Q
    | ||||||| ||||| ||||||| |||||||||  || ||||||||||||||| ||| | ||||||    
T  19365832 a-tgccaaattcgtgtcacgatttctctgttctttcagaccacaaatttgaagtcaaatctcaaca 19365768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 143 - 218
Target Start/End: Complemental strand, 24202326 - 24202251
Alignment:
Q  143 atcgtgtcacgattgccaaat-cgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 218  Q
    ||||||||||||| ||||||| |||| ||||||| ||||||||| ||| ||||||||||||||||||| | ||||||    
T  24202326 atcgtgtcacgat-gccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatctcaaca 24202251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 160 - 219
Target Start/End: Original strand, 3282273 - 3282332
Alignment:
Q  160 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaacaa 219  Q
    |||||||| |||||||  |||||||| || |||||||||||||||||||| |||||||||    
T  3282273 aaatcgtgtcacgatttttctgttcttcctaaccacaaatttgaagccaaatttcaacaa 3282332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 160 - 210
Target Start/End: Complemental strand, 24793723 - 24793673
Alignment:
Q  160 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
    |||||||| ||||||| ||||||||| ||| ||||||||||||||||||||    
T  24793723 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 24793673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 13604152 - 13604095
Alignment:
Q  161 aatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 218  Q
    ||||||| ||||||| ||||||||| ||||||||||||||||||| ||| | ||||||    
T  13604152 aatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagacaaatctcaaca 13604095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 33 - 210
Target Start/End: Complemental strand, 9036187 - 9036010
Alignment:
Q  33 gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctcac 132  Q
    |||||||| ||||||  |||||||||| ||||||||||   |||||||||||||||  ||  || ||| ||||| |||||  || |||| || |||||||    
T  9036187 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttaacaaaatagtgacacgaatttgcaccctgcaacct-agctcac 9036089  T
Q  133 tgcctctccga--tcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
     ||  | ||||  ||||||||||||  | |||||||| ||||||| | ||||||| ||| ||||||||||||||| ||||    
T  9036088 ggcacc-ccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 9036010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 109
Target Start/End: Complemental strand, 21053727 - 21053648
Alignment:
Q  31 atgaccagtctttatcagagatacttaaccagcaagttt-ctgaatcgtgtcacgatttcccaggatcgtggcacgattt 109  Q
    |||||||||| ||||||  || ||||||| ||||||||| |  ||||||||||||||||||||  |||||| ||||||||    
T  21053727 atgaccagtccttatcatggaaacttaacgagcaagtttgcacaatcgtgtcacgatttcccacaatcgtgtcacgattt 21053648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 31 - 109
Target Start/End: Complemental strand, 9986972 - 9986894
Alignment:
Q  31 atgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattt 109  Q
    |||||||||| |||| |  || ||||||| |||||||||   ||||||||||||||||||||  |||||| ||||||||    
T  9986972 atgaccagtccttattatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccaaaatcgtgtcacgattt 9986894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 88
Target Start/End: Complemental strand, 24202417 - 24202360
Alignment:
Q  31 atgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgattt 88  Q
    |||||||||| ||||||  |||||||||| |||||||||   ||||||||||||||||    
T  24202417 atgaccagtccttatcaaggatacttaacgagcaagtttgaaaatcgtgtcacgattt 24202360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 177; Significance: 4e-95; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 177; E-Value: 4e-95
Query Start/End: Original strand, 219 - 496
Target Start/End: Complemental strand, 4246269 - 4245988
Alignment:
Q  219 aagaccaagaatatctttgaatttgacaatggattcaagtctagcggcgatattt----tccaacttacaaaacatatctctttcttcaaagttgaaaaa 314  Q
    ||||| |||||||||||||||||||| |||| ||||||| |||||  | |||| |    ||||||||| ||| |||||| || |||||||||||||||||    
T  4246269 aagactaagaatatctttgaatttgagaatgtattcaagcctagcaactatatatatcttccaacttaaaaaccatatccctatcttcaaagttgaaaaa 4246170  T
Q  315 gcgagagaagtagttaagagtactcacctgcttctccttgttcttggaaatagaaactttagtagagatgtgatcgagagggtcgtcagctatatagaga 414  Q
    ||||||||||||||||  | ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||    
T  4246169 gcgagagaagtagttagtactactcacatgcttctccttgttcttggaaatagaaactttagtagagatatgatcgagaaggtcgtcagctatataggga 4246070  T
Q  415 gcatctttgaggtcatcaagccagttgttaacagcagagtctttgacttgtttctgttcagcatcattaaggacagcttcaa 496  Q
    ||||||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  4246069 gcatctttgaggtcatcaaactagttgttaacagcagagtctttgagttgtttctgttcagcatcattaaggacagcttcaa 4245988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 170; E-Value: 6e-91
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 19344793 - 19345010
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    ||||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  19344793 atcgtgtcatgatctgcaacggtccccaggttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 19344892  T
Q  101 gcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatt 200  Q
     || ||||||||||||||||||||| |||||| || ||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  19344893 ccatgattttgcttccagcaaacttggctcacggcatctccgatcgtatcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatt 19344992  T
Q  201 tgaagccaattttcaaca 218  Q
    ||||||||||||||||||    
T  19344993 tgaagccaattttcaaca 19345010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 19349651 - 19349868
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    ||||||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  19349651 atcgtgtcacgatctgcaacggtcctcaggttgaccagtccttatcagagatacttaaccaacaagtttctgaatcgtgtcacgatttcccaagatcgtg 19349750  T
Q  101 gcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatt 200  Q
     |||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||    
T  19349751 ccacgattttgcttccagcaaacttggctcacggcatctccgatcgtgtcacgattgccaaattgcgacacgattcctctgttcttccaaaccacaaatt 19349850  T
Q  201 tgaagccaattttcaaca 218  Q
    |||| |||||||||||||    
T  19349851 tgaaaccaattttcaaca 19349868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 219 - 524
Target Start/End: Original strand, 4315114 - 4315416
Alignment:
Q  219 aagaccaagaatatctttgaatttgacaatggattcaagtctagcggcgatattttccaacttacaaaacatatctctttcttcaaagttgaaaaagcga 318  Q
    ||||||||||||||||||||| |||| |||| |||||||| ||||  | |||| |||||||||||||| |||||| | |||||||||||||||||||| |    
T  4315114 aagaccaagaatatctttgaacttgagaatgtattcaagtttagcaactatatcttccaacttacaaaccatatcccgttcttcaaagttgaaaaagcta 4315213  T
Q  319 gagaagtagttaagag---tactcacctgcttctccttgttcttggaaatagaaactttagtagagatgtgatcgagagggtcgtcagctatatagagag 415  Q
    ||||||||||||| ||   | |||||||||||      ||||||   | ||| | |||| ||||| ||||| |||||| | || ||||| | ||| | ||    
T  4315214 gagaagtagttaacagcggtgctcacctgctt------gttcttctgagtagcagctttggtagaaatgtggtcgagaagatcatcagcaaaataaacag 4315307  T
Q  416 catctttgaggtcatcaagccagttgttaacagcagagtctttgacttgtttctgttcagcatcattaaggacagcttcaacagcataaagagtgttctt 515  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||  ||||||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  4315308 catctttgagatcatcaagccatttgttaacagcagagtctttgaactgtttctgttcagtatcattaagcacagcttcaacagcataaagagtgttctt 4315407  T
Q  516 caacctttg 524  Q
    |||||||||    
T  4315408 caacctttg 4315416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 219 - 529
Target Start/End: Original strand, 4306252 - 4306559
Alignment:
Q  219 aagaccaagaatatctttgaatttgacaatggattcaagtctagcggcgatattttccaacttacaaaacatatctctttcttcaaagttgaaaaagcga 318  Q
    |||||||| ||||||||||||||||| |||| |||||||||||||  | |||| | |||||| ||||| |||||||||||||||||||||||||||||||    
T  4306252 aagaccaaaaatatctttgaatttgagaatgtattcaagtctagcaactatatctaccaactcacaaaccatatctctttcttcaaagttgaaaaagcga 4306351  T
Q  319 gagaagtagttaagagtactcacctgcttctccttgttcttggaaatagaaactttagtagagatgtgatcgagagggtcgtcagctatatagagagcat 418  Q
    ||||||||||||| |  ||||||||  || |   | | |||   ||| | | |||| ||||||||||| |||||| | || ||||  | ||| | |||||    
T  4306352 gagaagtagttaacaacactcacctctttgt---tttccttcccaattgcagctttggtagagatgtggtcgagaagatcatcagtaaaataaacagcat 4306448  T
Q  419 ctttgaggtcatcaagccagttgttaacagcagagtctttgacttgtttctgttcagcatcattaaggacagcttcaacagcataaagagtgttcttcaa 518  Q
    ||||||| ||||||||||| ||| ||||||||||||||||||  ||||||||||||||||| || |  ||||||||||||||||||||||||||||||||    
T  4306449 ctttgagatcatcaagccatttgataacagcagagtctttgagctgtttctgttcagcatcgttcaacacagcttcaacagcataaagagtgttcttcaa 4306548  T
Q  519 cctttgcacca 529  Q
    |||||| ||||    
T  4306549 cctttgaacca 4306559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 39811693 - 39811484
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    |||||||||||||||||||||| ||| |||  ||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  39811693 atcgtgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 39811594  T
Q  101 gcacgattttgcttccagcaaacttagctcactgcctc-tccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaat 199  Q
     |||||||| || ||| |||||||| ||| || | | | |   |||||||||||||  | |||||||| ||||||| ||||||||| ||| |||||||||    
T  39811593 ccacgatttggcgtcctgcaaactt-gcttacggtcacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaat 39811495  T
Q  200 ttgaagccaat 210  Q
    |||||||||||    
T  39811494 ttgaagccaat 39811484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 219 - 534
Target Start/End: Original strand, 4309133 - 4309442
Alignment:
Q  219 aagaccaagaatatctttgaatttgacaatggattcaagtctagcggcgatattttccaacttacaaaacatatctctttcttcaaagttgaaaaagcga 318  Q
    ||||||||||||||  |||| ||| | |||| |||||||||||||  | || | |||||||||| ||| |||||| ||||||||||| ||||||||  ||    
T  4309133 aagaccaagaatattattgattttcagaatgtattcaagtctagcaactatgtcttccaacttataaaccatatccctttcttcaaaattgaaaaatgga 4309232  T
Q  319 gagaagtagttaagagtactcacctgcttctccttgttcttggaaatagaaactttagtagagatgtgatcgagagggtcgtcagctatatagagagcat 418  Q
    ||||||||||||  |||||||||||      ||||||||||   | ||| | |||| ||| | ||||| |||| | |||| ||||| | ||||| ||| |    
T  4309233 gagaagtagttagtagtactcacct------ccttgttcttccgagtagcagctttggtacaaatgtggtcgaaaaggtcatcagcaacatagacagcgt 4309326  T
Q  419 ctttgaggtcatcaagccagttgttaacagcagagtctttgacttgtttctgttcagcatcattaaggacagcttcaacagcataaagagtgttcttcaa 518  Q
    ||||||| ||||| ||||| || |||| ||||||||||||||  |||||||| ||  ||||||| || |||||||| ||||||||||||||||| |||||    
T  4309327 ctttgagatcatcgagccatttcttaatagcagagtctttgaactgtttctgctccacatcattcagcacagcttccacagcataaagagtgttattcaa 4309426  T
Q  519 cctttgcaccagattg 534  Q
    |||||| |||| ||||    
T  4309427 cctttgaaccaaattg 4309442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 31 - 210
Target Start/End: Original strand, 14291939 - 14292118
Alignment:
Q  31 atgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctc 130  Q
    |||||||||| ||||||| | |||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||| || ||| |||||| ||||||    
T  14291939 atgaccagtccttatcagtggtacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctc 14292037  T
Q  131 actgcctctc-cgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
    || ||  |||  ||||||||||||||  | |||||||| ||||||| ||||||||| ||| ||||||||||||||||||||    
T  14292038 acggcacctcgagatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 14292118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 219 - 534
Target Start/End: Complemental strand, 4253383 - 4253074
Alignment:
Q  219 aagaccaagaatatctttgaatttgacaatggattcaagtctagcggcgatattttccaacttacaaaacatatctctttcttcaaagttgaaaaagcga 318  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||  | |||||||||| |||||||| ||| || ||||||||||||||||||||||||    
T  4253383 aagaccaagaatatctttgaatttgagaatggattcaagtttagcaactatattttccagcttacaaagcatgtccctttcttcaaagttgaaaaagcga 4253284  T
Q  319 gagaagtagttaagagtactcacctgcttctccttgttcttggaaatagaaactttagtagagatgtgatcgagagggtcgtcagctatatagagagcat 418  Q
    || || || |||  |||||||||||||||    || ||||  |   ||| | |||| || || ||||  || ||| |||| ||||||| ||||| | ||     
T  4253283 gataaataattagcagtactcacctgctt---gtttttctgtg---tagcagctttggttgaaatgttgtcaagaaggtcatcagctacatagacaacac 4253190  T
Q  419 ctttgaggtcatcaagccagttgttaacagcagagtctttgacttgtttctgttcagcatcattaaggacagcttcaacagcataaagagtgttcttcaa 518  Q
    ||||||| ||||| | |||  |||||| ||||| || |||||  ||||| || || ||||| ||||  |||||||| |||||||||||||||||||||||    
T  4253189 ctttgagatcatcgatccatctgttaatagcagggtttttgaactgtttttgctccgcatcgttaaacacagcttccacagcataaagagtgttcttcaa 4253090  T
Q  519 cctttgcaccagattg 534  Q
    |||||| |||| ||||    
T  4253089 cctttggaccaaattg 4253074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 32247157 - 32247345
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||| |||||                   
T  32247157 atcgtgtcacgatctgcaacggtccccaggttgaccagtctttatcagtgatacttaacgagcaagtttctgaatcgtgccacga--------------- 32247241  T
Q  101 gcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatt 200  Q
          |||||| |||||||||||| |||||| || ||||  |||||||||||||| | |||||||| ||||||| ||||||||| ||| ||||||||||    
T  32247242 ------ttttgcatccagcaaacttggctcacggcatctcaaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatt 32247335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 31 - 210
Target Start/End: Complemental strand, 9296048 - 9295869
Alignment:
Q  31 atgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctc 130  Q
    |||||||||| ||||||  |||||||||  |||||||||||||||||||||||||||||||| ||||||| |||||||| || ||| |||||| ||||||    
T  9296048 atgaccagtccttatcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcatcctgcaaac-tagctc 9295950  T
Q  131 actgc-ctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
    || || |  |   |||||||||||||  | |||||||| ||||||| ||||||||| ||| ||||||||||||||||||||    
T  9295949 acggcaccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 9295869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 32 - 210
Target Start/End: Complemental strand, 11098572 - 11098394
Alignment:
Q  32 tgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctca 131  Q
    ||||||||| ||||||| |||||||||| ||||||||||| |||||||||||||||||||| ||||||| |||||||| || ||| |||||| |||||||    
T  11098572 tgaccagtccttatcagtgatacttaacgagcaagtttctaaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctca 11098474  T
Q  132 ctgc-ctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
    | || |  |   |||||||||| ||  | |||||||| ||||||| ||||||||| ||| ||||||||||||||||||||    
T  11098473 cggcaccttgaaatcgtgtcactatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 11098394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 12647750 - 12647960
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggat-gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgt 99  Q
    ||||||||||||| |||  | ||||| ||||  |||||||| ||||||  |||||||||| ||||||||| || |||||||||||||||||||  |||||    
T  12647750 atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttatggatcgtgtcacgatttcccacaatcgt 12647849  T
Q  100 ggcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaat 199  Q
    | ||||||||     || |||| | |||||||| || ||    |||||||||||||  | |||||||| ||||||| | ||||||| ||| |||||||||    
T  12647850 gccacgatttgcacccctgcaaccctagctcacggcatccgaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaat 12647949  T
Q  200 ttgaagccaat 210  Q
    |||||| ||||    
T  12647950 ttgaagacaat 12647960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 53 - 220
Target Start/End: Original strand, 3492212 - 3492379
Alignment:
Q  53 acttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctcactgcctctc-cgatcgtgtca 151  Q
    ||||||| |||||||||| ||||||||||||||||||||| ||||||| |||||||| ||  || ||||||  ||||||| || || |   |||||||||    
T  3492212 acttaacgagcaagtttcagaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctcacggcatcacaaaatcgtgtca 3492310  T
Q  152 cgattgccaaa-tcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaacaaa 220  Q
    ||| ||||||| ||||| ||| ||| |||||||||  || ||||||||||||||||||| | ||||||||    
T  3492311 cga-tgccaaattcgtgtcacaatttctctgttctttcagaccacaaatttgaagccaaatctcaacaaa 3492379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 33 - 209
Target Start/End: Original strand, 25410081 - 25410257
Alignment:
Q  33 gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctcac 132  Q
    ||||| || ||||||  |||||||||| |||||||||   |||||||||||||||||||| ||||||| |||||||| ||  || ||||||  | |||||    
T  25410081 gaccattccttatcaaggatacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-catctcac 25410179  T
Q  133 tgcctctc-cgatcgtgtcacgattgccaaa-tcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaa 209  Q
     || || |   |||||||||||| ||||||| ||||| ||||||| ||||||||| ||| |||||||||||||||||||    
T  25410180 ggcatcacaaaatcgtgtcacga-tgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 25410257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 33 - 205
Target Start/End: Original strand, 4484738 - 4484910
Alignment:
Q  33 gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctcac 132  Q
    |||||||| |||||| ||| ||||||| |||||||||   ||||||||||||||| |  | ||||||| |||||||| ||  || ||||||| |||||||    
T  4484738 gaccagtccttatcatagaaacttaacgagcaagtttgcaaatcgtgtcacgattccttaagatcgtgtcacgatttggcaccctgcaaact-agctcac 4484836  T
Q  133 tgcctc-tccgatcgtgtcacgattgccaaa-tcgtgacacgattcctctgttctcccaaaccacaaatttgaag 205  Q
     || || |   |||||||||||| ||||||| ||||| ||||||| ||||||||| ||| |||||||||||||||    
T  4484837 ggcatcatgaaatcgtgtcacga-tgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaag 4484910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 53 - 218
Target Start/End: Complemental strand, 30833086 - 30832921
Alignment:
Q  53 acttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctcactgcctctc-cgatcgtgtca 151  Q
    ||||||| |||||||||   |||||||||||||||||||| ||||||| |||||||| ||  || ||||||  ||||||| || || |   |||||||||    
T  30833086 acttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctcacggcatcacgaaatcgtgtca 30832988  T
Q  152 cgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 218  Q
    ||||  | || || || ||||||| ||||||||| ||| ||||||||||||||||||| | ||||||    
T  30832987 cgatgtcaaattcatgtcacgatttctctgttcttccagaccacaaatttgaagccaaatctcaaca 30832921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 28258727 - 28258667
Alignment:
Q  160 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaacaaa 220  Q
    |||||||| ||||||| ||||||| | ||||||||||||||||||||||| ||||||||||    
T  28258727 aaatcgtgtcacgatttctctgtttttccaaaccacaaatttgaagccaaatttcaacaaa 28258667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 36757475 - 36757419
Alignment:
Q  160 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaa 216  Q
    |||||||| |||||||  |||||||| ||||||||||||||||||||||||||||||    
T  36757475 aaatcgtgtcacgatttttctgttcttccaaaccacaaatttgaagccaattttcaa 36757419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 33 - 218
Target Start/End: Complemental strand, 32289333 - 32289148
Alignment:
Q  33 gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctcac 132  Q
    |||||||| ||||||  || ||||||| |||||||||   ||||||||||||||| | || ||||||| || ||||| ||  || ||||||  |||||||    
T  32289333 gaccagtccttatcatggaaacttaacgagcaagttttcaaatcgtgtcacgattcctcaagatcgtgtcaagatttggcaccctgcaaacc-agctcac 32289235  T
Q  133 tgcctctccga-tcgtgtcacgattgccaaat-cgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 218  Q
     || || |  | |||||||||||| ||||||| |||| ||||||| ||||||||| ||| ||||||||||||||||||| | ||||||    
T  32289234 ggcatcacaaaatcgtgtcacgat-gccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatctcaaca 32289148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 44310545 - 44310478
Alignment:
Q  143 atcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
    |||||||||||||  | |||||||| ||||||| ||||||||| ||| ||||||||||||||||||||    
T  44310545 atcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 44310478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 160 - 210
Target Start/End: Complemental strand, 8389681 - 8389631
Alignment:
Q  160 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
    |||||||| ||||||| ||||||||| ||||||||||||||||||||||||    
T  8389681 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 8389631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 160 - 211
Target Start/End: Complemental strand, 33528155 - 33528104
Alignment:
Q  160 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaatt 211  Q
    |||| ||| ||||||| ||||||||| |||||||||||||||||||||||||    
T  33528155 aaattgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatt 33528104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 160 - 210
Target Start/End: Complemental strand, 10706783 - 10706733
Alignment:
Q  160 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
    |||||||| ||||||| ||||||||| |||||| |||||||||||||||||    
T  10706783 aaatcgtgtcacgatttctctgttcttccaaacaacaaatttgaagccaat 10706733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 211
Target Start/End: Original strand, 20522797 - 20522839
Alignment:
Q  169 cacgattcctctgttctcccaaaccacaaatttgaagccaatt 211  Q
    ||||||| ||||||||| |||||||||||||||||||||||||    
T  20522797 cacgatttctctgttcttccaaaccacaaatttgaagccaatt 20522839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 160 - 210
Target Start/End: Original strand, 21630511 - 21630561
Alignment:
Q  160 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
    |||||||| ||||||| ||||||||| |||||| |||||||||||||||||    
T  21630511 aaatcgtgtcacgatttctctgttcttccaaactacaaatttgaagccaat 21630561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 160 - 210
Target Start/End: Original strand, 39483443 - 39483493
Alignment:
Q  160 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
    |||||||| ||| ||| ||||||||| ||||||||||||||||||||||||    
T  39483443 aaatcgtgtcacaatttctctgttcttccaaaccacaaatttgaagccaat 39483493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 143 - 218
Target Start/End: Original strand, 40739382 - 40739457
Alignment:
Q  143 atcgtgtcacgattgccaaa-tcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 218  Q
    |||||||||||| ||||||| ||||| |||||||  |||||||| ||| ||||||||||||||||||| | ||||||    
T  40739382 atcgtgtcacga-tgccaaattcgtgtcacgatttgtctgttcttccagaccacaaatttgaagccaaatctcaaca 40739457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 23078002 - 23077943
Alignment:
Q  160 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaacaa 219  Q
    |||||||| ||||||| ||||||||| |||||||| || |||||||||||| | ||||||    
T  23078002 aaatcgtgtcacgatttctctgttcttccaaaccaaaattttgaagccaatatgcaacaa 23077943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 33118696 - 33118751
Alignment:
Q  164 cgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaacaa 219  Q
    |||| ||||||| |||| |||||||||| ||||||||||||| ||| |||||||||    
T  33118696 cgtgtcacgatttctctattctcccaaaacacaaatttgaagacaaatttcaacaa 33118751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 143 - 183
Target Start/End: Complemental strand, 29867531 - 29867491
Alignment:
Q  143 atcgtgtcacgattgccaaatcgtgacacgattcctctgtt 183  Q
    ||||||||||| ||||||||||||| ||||||| |||||||    
T  29867531 atcgtgtcacgcttgccaaatcgtgtcacgatttctctgtt 29867491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 174; Significance: 2e-93; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 35745762 - 35745979
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  35745762 atcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcatagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 35745861  T
Q  101 gcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatt 200  Q
     |||||||||||||||| ||||||| |||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  35745862 ccacgattttgcttccaacaaacttggctcacggcatctccgatcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatt 35745961  T
Q  201 tgaagccaattttcaaca 218  Q
    ||||||||||||||||||    
T  35745962 tgaagccaattttcaaca 35745979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 39784541 - 39784330
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  39784541 atcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagtgatacttaaccaacaagtttctgaatcgtgtcacgatttcccaagatcgtg 39784442  T
Q  101 gcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatt 200  Q
     ||||||||||| |||||||||||| |||||| ||  |||| |||||||||||||| | |||||||| ||||||| ||||||||| ||| ||||||||||    
T  39784441 ccacgattttgcatccagcaaacttggctcacggcacctccaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatt 39784342  T
Q  201 tgaagccaattt 212  Q
    ||||||||||||    
T  39784341 tgaagccaattt 39784330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 10683955 - 10683746
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    |||||||||||||||||||||||||||| | ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  10683955 atcgtgtcacgatctgcaacggtccccaagttgaccagtccttatcagagatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 10683856  T
Q  101 gcacgattttgcttccagcaaacttagctcactgc-ctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaat 199  Q
     |||||||| || ||| |||||| |||||||| || |  |   |||||||||||||  | |||||||| ||||||| ||||||||| ||| |||||||||    
T  10683855 ccacgatttggcgtcctgcaaac-tagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaat 10683757  T
Q  200 ttgaagccaat 210  Q
    |||||||||||    
T  10683756 ttgaagccaat 10683746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 31 - 210
Target Start/End: Original strand, 36979828 - 36980007
Alignment:
Q  31 atgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctc 130  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||| |||||||| || ||| |||||| ||||||    
T  36979828 atgaccagtccttatcagagatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgatttggcgtcctgcaaac-tagctc 36979926  T
Q  131 actgcctctc-cgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
    || ||  |||   |||||||||||||  | |||||||| ||||||| ||||||||| ||| ||||||||||||||||||||    
T  36979927 acggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 36980007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 25327880 - 25327671
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    |||||||||||| ||||||||| ||| ||| |||| |||| ||||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  25327880 atcgtgtcacgagctgcaacggacccaaggttgacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 25327781  T
Q  101 gcacgattttgcttccagcaaacttagctcactgcctc-tccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaat 199  Q
     || ||||| || ||| |||||| |||||||| ||| | |   |||||| |||||   | |||||||| ||||||| ||||||||| ||| |||||||||    
T  25327780 ccatgatttggcgtcctgcaaac-tagctcacagccacttgaaatcgtgccacgaagccaaaatcgtgtcacgatttctctgttcttccagaccacaaat 25327682  T
Q  200 ttgaagccaat 210  Q
    |||||||||||    
T  25327681 ttgaagccaat 25327671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 31 - 210
Target Start/End: Complemental strand, 33037473 - 33037294
Alignment:
Q  31 atgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctc 130  Q
    |||||||||| ||||||| |||||||||  |||||||||||||||||||||||||||||||| ||||||| |||||||| || ||| |||||| ||||||    
T  33037473 atgaccagtccttatcagtgatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaaac-tagctc 33037375  T
Q  131 actgcctctc-cgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
    || ||  |||   |||||||||||||  | |||||||| ||||||| ||||||||| ||| ||||||||||||||||||||    
T  33037374 acggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 33037294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 18852844 - 18852634
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccagg-atgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgt 99  Q
    |||||||||||||||||  | | ||| ||| |||||||||| ||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  18852844 atcgtgtcacgatctgcgtctgacccaaggtatgaccagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgt 18852745  T
Q  100 ggcacgattttgcttccagcaaacttagctcactgc-ctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaa 198  Q
    | |||||||| || ||| |||||| |||||||| || |  |   |||||||||||||  | |||||||  ||||||| ||||||||| ||| ||||||||    
T  18852744 gccacgatttggcgtcctgcaaac-tagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtatcacgatttctctgttcttccagaccacaaa 18852646  T
Q  199 tttgaagccaat 210  Q
    ||||||||||||    
T  18852645 tttgaagccaat 18852634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 18870238 - 18870028
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccagg-atgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgt 99  Q
    |||||||||||||||||  | | ||| ||| |||||||||| |||| || |||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  18870238 atcgtgtcacgatctgcgtctgacccaaggtatgaccagtccttattagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgt 18870139  T
Q  100 ggcacgattttgcttccagcaaacttagctcactgcctc-tccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaa 198  Q
    | |||||||| || ||| |||||| ||||||||  | || |   |||||||||||||  | |||||||| ||||||| ||||||||| ||| ||||||||    
T  18870138 gccacgatttggcgtcctgcaaac-tagctcacgacatcttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaa 18870040  T
Q  199 tttgaagccaat 210  Q
    ||||||||||||    
T  18870039 tttgaagccaat 18870028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 31 - 210
Target Start/End: Complemental strand, 4759720 - 4759541
Alignment:
Q  31 atgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctc 130  Q
    |||||||||| ||||||  |||||||||| ||||||||||| |||||||||||||||||||| ||||||| |||||||| || ||| |||||| ||||||    
T  4759720 atgaccagtccttatcaaggatacttaacgagcaagtttctaaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctc 4759622  T
Q  131 actgcctctc-cgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
    || ||  |||   |||||||||||||  | |||||||| ||||||| ||||||||| ||| ||||||||||||||||||||    
T  4759621 acggcacctcgaaatcgtgtcacgatgtcaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 4759541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 32 - 210
Target Start/End: Original strand, 30656097 - 30656275
Alignment:
Q  32 tgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctca 131  Q
    ||||||||| ||||||  |||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||| || ||| |||||| |||||||    
T  30656097 tgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctca 30656195  T
Q  132 ctgc-ctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
    | || |  |   |||||||||||||  | |||||||| ||||||| ||||||||| ||| ||||||||||||||||||||    
T  30656196 cggcaccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 30656275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 6311719 - 6311928
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    ||||||||||||| |||| | | ||| ||| |||| |||| |||| || |||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  6311719 atcgtgtcacgatttgcatctgacccaaggttgacaagtccttattagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 6311818  T
Q  101 gcacgattttgcttccagcaaacttagctcactgc-ctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaat 199  Q
     |||||||| || ||| |||||| |||||||| || |  |   |||||||||||||  | |||||||| || |||| ||||||||| ||| |||||||||    
T  6311819 ccacgatttggcgtcctgcaaac-tagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtgtcatgatttctctgttcttccagaccacaaat 6311917  T
Q  200 ttgaagccaat 210  Q
    |||||||||||    
T  6311918 ttgaagccaat 6311928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 10688815 - 10688692
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    ||||||||||||| |||| | | ||| ||| |||| |||| |||| || |||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  10688815 atcgtgtcacgatttgcatctgacccaaggttgacaagtccttattagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 10688716  T
Q  101 gcacgattttgcttccagcaaact 124  Q
     |||||||| || ||| |||||||    
T  10688715 ccacgatttggcgtcctgcaaact 10688692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 37 - 210
Target Start/End: Complemental strand, 7289608 - 7289434
Alignment:
Q  37 agtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctca---ct 133  Q
    |||| ||||||| |||||||||| |||||||||||||||||||||||||||| ||| ||||||| |||||||| || ||| |||||| |||||||   ||    
T  7289608 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgtcacgatttggcgtcctgcaaac-tagctcatggct 7289510  T
Q  134 gcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
     ||| |   |||||||||||||  | |||||||| ||| ||| ||||||||| ||| ||||||||||||||| ||||    
T  7289509 ccct-tgaaatcgtgtcacgatgccaaaatcgtgtcactatttctctgttcttccagaccacaaatttgaagtcaat 7289434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 31 - 218
Target Start/End: Complemental strand, 1261601 - 1261414
Alignment:
Q  31 atgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctc 130  Q
    |||||||||| ||||||  |||||||||| |||||||||   |||||||||||||||||||| ||||||| |||||||| ||  || |||||| ||||||    
T  1261601 atgaccagtccttatcaaggatacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-tagctc 1261503  T
Q  131 actgcctctc-cgatcgtgtcacgattgccaaa-tcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 218  Q
    || || || |   |||||||||||| ||||||| ||||| | ||||| || |||||| |||||||||||||||||| |||| | ||||||    
T  1261502 acggcatcacgaaatcgtgtcacga-tgccaaattcgtgtcgcgatttctgtgttcttccaaaccacaaatttgaaaccaaatatcaaca 1261414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 33 - 210
Target Start/End: Complemental strand, 3439271 - 3439095
Alignment:
Q  33 gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctcac 132  Q
    |||||||| ||||||  |||||||||| ||||||||||   |||||||||||||||||||  |||||| |||||||||||  || |||| || |||||||    
T  3439271 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaacct-agctcac 3439174  T
Q  133 tgcctctccga--tcgtgtcacgattgcca-aatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
     ||  | ||||  |||||||||||| |||| ||||||| ||||||| ||||||||| ||||||||||||||||||| ||||    
T  3439173 ggcacc-ccgaaatcgtgtcacgat-gccacaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagacaat 3439095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 143 - 218
Target Start/End: Original strand, 7412877 - 7412952
Alignment:
Q  143 atcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 218  Q
    |||||||||||||  | |||||||| ||||||| ||||||||| ||||||||||||||||||| ||| ||||||||    
T  7412877 atcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagtcaaatttcaaca 7412952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 160 - 211
Target Start/End: Complemental strand, 5702009 - 5701958
Alignment:
Q  160 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaatt 211  Q
    |||||||| ||||||| ||||||||| |||||||||||||||||||||||||    
T  5702009 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatt 5701958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 42575691 - 42575902
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggat-gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacga-tttcccaggatcg 98  Q
    ||||||||||||| |||  | ||||| ||||  |||||||| ||||||  |||||||||| |||||||||||  |||||||||||| |||||||  ||||    
T  42575691 atcgtgtcacgatttgcgtccgtcccaaggaaagaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcg 42575790  T
Q  99 tggcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaa 198  Q
    || ||||||||     || |||| | || ||||| || ||    |||||||| ||||  | |||||||| ||||||| | ||||||| ||||||||||||    
T  42575791 tgacacgatttgcacccctgcaaccctaactcacggcatccgaaatcgtgtcgcgatcccaaaatcgtgtcacgatttccctgttcttccaaaccacaaa 42575890  T
Q  199 tttgaagccaat 210  Q
    ||||||| ||||    
T  42575891 tttgaagacaat 42575902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 33 - 219
Target Start/End: Original strand, 26288332 - 26288518
Alignment:
Q  33 gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctcac 132  Q
    |||||||| ||||||  || ||||||| |||||||||   ||| |||||||||||||||| ||| ||| |||||||| ||  || ||||||  |||||||    
T  26288332 gaccagtccttatcatggaaacttaacgagcaagtttgaaaattgtgtcacgatttcccaagattgtgtcacgatttggcaccctgcaaacc-agctcac 26288430  T
Q  133 tgcctctccga-tcgtgtcacgattgccaaat-cgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaacaa 219  Q
     || || |  | || ||||||||| ||||||| |||| ||||||| ||||||||| ||| ||||||||||||||| ||| | |||||||    
T  26288431 ggcatcacaaaatcatgtcacgat-gccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaagtctcaacaa 26288518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 33 - 219
Target Start/End: Original strand, 26301589 - 26301775
Alignment:
Q  33 gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctcac 132  Q
    |||||||| ||||||  || ||||||| |||||||||   ||| |||||||||||||||| ||| ||| |||||||| ||  || ||||||  |||||||    
T  26301589 gaccagtccttatcatggaaacttaacgagcaagtttgaaaattgtgtcacgatttcccaagattgtgtcacgatttggcaccctgcaaacc-agctcac 26301687  T
Q  133 tgcctctccga-tcgtgtcacgattgccaaat-cgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaacaa 219  Q
     || || |  | || ||||||||| ||||||| |||| ||||||| ||||||||| ||| ||||||||||||||| ||| | |||||||    
T  26301688 ggcatcacaaaatcatgtcacgat-gccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaagtctcaacaa 26301775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 33 - 219
Target Start/End: Original strand, 26313583 - 26313769
Alignment:
Q  33 gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctcac 132  Q
    |||||||| ||||||  || ||||||| |||||||||   ||| |||||||||||||||| ||| ||| |||||||| ||  || ||||||  |||||||    
T  26313583 gaccagtccttatcatggaaacttaacgagcaagtttgaaaattgtgtcacgatttcccaagattgtgtcacgatttggcaccctgcaaacc-agctcac 26313681  T
Q  133 tgcctctccga-tcgtgtcacgattgccaaat-cgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaacaa 219  Q
     || || |  | || ||||||||| ||||||| |||| ||||||| ||||||||| ||| ||||||||||||||| ||| | |||||||    
T  26313682 ggcatcacaaaatcatgtcacgat-gccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaagtctcaacaa 26313769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 33 - 112
Target Start/End: Complemental strand, 25689725 - 25689646
Alignment:
Q  33 gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgc 112  Q
    |||||||| ||||||  |||||||||| ||||||||||   ||||||| |||||||||||  |||||| |||||||||||    
T  25689725 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtgacgatttcccacaatcgtgccacgattttgc 25689646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 160 - 210
Target Start/End: Complemental strand, 10688675 - 10688625
Alignment:
Q  160 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
    |||||||| ||||||| ||||||||| ||| ||||||||||||||||||||    
T  10688675 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 10688625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 4456575 - 4456624
Alignment:
Q  160 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaa 209  Q
    |||||||| ||||||| || |||||| |||||||||||||||||||||||    
T  4456575 aaatcgtgtcacgatttctttgttcttccaaaccacaaatttgaagccaa 4456624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 34 - 210
Target Start/End: Complemental strand, 15290327 - 15290150
Alignment:
Q  34 accagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacga-tttcccaggatcgtggcacgattttgcttccagcaaacttagctcac 132  Q
    ||||||| ||||||  |||||||||| |||||||||||  |||||||||||| |||||||  |||||| ||||||||     || |||| | || |||||    
T  15290327 accagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaaccctaactcac 15290228  T
Q  133 tgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
     || ||    |||||||| | ||  | |||||||| ||||||| | ||||||| ||||||||||||||||||| ||||    
T  15290227 ggcatccgaaatcgtgtcgcaatcccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaat 15290150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 34 - 210
Target Start/End: Complemental strand, 15470696 - 15470519
Alignment:
Q  34 accagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacga-tttcccaggatcgtggcacgattttgcttccagcaaacttagctcac 132  Q
    ||||||| ||||||  |||||||||| |||||||||||  |||||||||||| |||||||  |||||| ||||||||     || |||| | || |||||    
T  15470696 accagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaaccctaactcac 15470597  T
Q  133 tgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
     || ||    |||||||| | ||  | |||||||| ||||||| | ||||||| ||||||||||||||||||| ||||    
T  15470596 ggcatccgaaatcgtgtcgcaatcccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaat 15470519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 19175282 - 19175233
Alignment:
Q  160 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaa 209  Q
    ||||||||||||||||  |||||||| ||||||| |||||||||||||||    
T  19175282 aaatcgtgacacgatttttctgttcttccaaaccgcaaatttgaagccaa 19175233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 143 - 218
Target Start/End: Complemental strand, 2627393 - 2627318
Alignment:
Q  143 atcgtgtcacgattgccaaat-cgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 218  Q
    ||||||||||||| ||||||| |||| ||||||| | ||||||| ||| ||||||||||||||||||| | ||||||    
T  2627393 atcgtgtcacgat-gccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 2627318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 160 - 210
Target Start/End: Complemental strand, 25689618 - 25689568
Alignment:
Q  160 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
    |||||||| ||||||| ||||||||| ||| ||||||||||||||| ||||    
T  25689618 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagacaat 25689568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 53 - 109
Target Start/End: Complemental strand, 2627483 - 2627427
Alignment:
Q  53 acttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattt 109  Q
    ||||||| |||||||||   ||||||||||||||||||||  |||||| ||||||||    
T  2627483 acttaacgagcaagtttgcaaatcgtgtcacgatttcccaaaatcgtgtcacgattt 2627427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 143 - 218
Target Start/End: Complemental strand, 31042983 - 31042908
Alignment:
Q  143 atcgtgtcacgattgccaaat-cgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 218  Q
    ||||||||||||| ||||||| |||| ||||||| |||| |||| ||| ||||||||||||||| ||| | ||||||    
T  31042983 atcgtgtcacgat-gccaaattcgtgtcacgatttctctattcttccagaccacaaatttgaagtcaaatctcaaca 31042908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 167; Significance: 3e-89; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 1955 - 1745
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    |||||||||||||||||||||||||| ||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  1955 atcgtgtcacgatctgcaacggtcccaaggttgaccagtccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 1856  T
Q  101 gcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatt 200  Q
     |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  1855 ccacgattttgcttccagcaaacttggctcactgcctccccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttcttccaaaccactaatt 1756  T
Q  201 tgaagccaatt 211  Q
    ||||| |||||    
T  1755 tgaagtcaatt 1745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 167; Significance: 3e-89; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 148660 - 148450
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    |||||||||||||||||||||||||| ||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  148660 atcgtgtcacgatctgcaacggtcccaaggttgaccagtccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 148561  T
Q  101 gcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatt 200  Q
     |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  148560 ccacgattttgcttccagcaaacttggctcactgcctccccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttcttccaaaccactaatt 148461  T
Q  201 tgaagccaatt 211  Q
    ||||| |||||    
T  148460 tgaagtcaatt 148450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 167; Significance: 3e-89; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 24265893 - 24265683
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    |||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  24265893 atcgtgtcacgatctgcaacggtccccaagttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 24265794  T
Q  101 gcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatt 200  Q
     ||||||||||||||||||||||||||||||||||||| | ||||||||||||| ||| |||||||||||||||||||||||||||||||||||| ||||    
T  24265793 ccacgattttgcttccagcaaacttagctcactgcctccctgatcgtgtcacgactgcaaaatcgtgacacgattcctctgttctcccaaaccactaatt 24265694  T
Q  201 tgaagccaatt 211  Q
    ||||| |||||    
T  24265693 tgaagtcaatt 24265683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 16880444 - 16880654
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||||| |||||||    
T  16880444 atcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacaatttcccaagatcgtg 16880543  T
Q  101 gcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatt 200  Q
     |||||||||||||||||||||||  |||||||||||| | |||||||||||||| || |||||||||||||||||||||| ||| ||||||||| ||||    
T  16880544 acacgattttgcttccagcaaactaggctcactgcctccctgatcgtgtcacgatggcaaaatcgtgacacgattcctctgctcttccaaaccactaatt 16880643  T
Q  201 tgaagccaatt 211  Q
    ||||| |||||    
T  16880644 tgaagtcaatt 16880654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 16885299 - 16885509
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||||| |||||||    
T  16885299 atcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacaatttcccaagatcgtg 16885398  T
Q  101 gcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatt 200  Q
     |||||||||||||||||||||||  |||||||||||| | |||||||||||||| || |||||||||||||||||||||| ||| ||||||||| ||||    
T  16885399 acacgattttgcttccagcaaactaggctcactgcctccctgatcgtgtcacgatggcaaaatcgtgacacgattcctctgctcttccaaaccactaatt 16885498  T
Q  201 tgaagccaatt 211  Q
    ||||| |||||    
T  16885499 tgaagtcaatt 16885509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 24261037 - 24260827
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    ||||||||||||| | ||||||||| || | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  24261037 atcgtgtcacgattttcaacggtcctcaagttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 24260938  T
Q  101 gcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatt 200  Q
     ||||||||||||| |||   |||| |||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  24260937 tcacgattttgctttcagattacttggctcactgcctccctgatcgtgtcacgatggccaaatcgtgacacgattcctctgttctcccaaaccacaaatt 24260838  T
Q  201 tgaagccaatt 211  Q
    |||||||||||    
T  24260837 tgaagccaatt 24260827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 21811955 - 21811747
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    |||||| ||| ||||||||||||| ||||| ||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||| |||||||    
T  21811955 atcgtgacacaatctgcaacggtctccaggttgaccagtccttatcagagatacttaactagcaagtttctggatcgtgtcacgatttcccaagatcgtg 21811856  T
Q  101 gcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatt 200  Q
     |||||||||||  || |||||| | |||||| || |||| |||||||||||||| || |||||||||||||||||||||||||| ||| ||||||||||    
T  21811855 ccacgattttgcaccctgcaaacattgctcacggcatctcagatcgtgtcacgatggcaaaatcgtgacacgattcctctgttcttccagaccacaaatt 21811756  T
Q  201 tgaagccaa 209  Q
    |||||||||    
T  21811755 tgaagccaa 21811747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 24024035 - 24023830
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  24024035 atcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 24023936  T
Q  101 gcacgattttgcttccagcaaacttagctcactgcctc-tccgatcgtgtcacgattgcca-aatcgtgacacgattcctctgttctcccaaaccacaaa 198  Q
     |||||||| || ||| |||||| |||||| ||||| | |   |||||| ||||| ||||| ||||||| ||||||| ||||||||| ||| ||||||||    
T  24023935 ccacgatttggcgtcctgcaaac-tagctctctgccacttgaaatcgtgccacga-tgccacaatcgtgtcacgatttctctgttcttccagaccacaaa 24023838  T
Q  199 tttgaagc 206  Q
    ||||||||    
T  24023837 tttgaagc 24023830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 31109287 - 31109075
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    |||||||||||||||||||||| ||| |||  ||| |||| |||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  31109287 atcgtgtcacgatctgcaacggccccaaggcagacaagtccttatcagttatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 31109188  T
Q  101 gcacgattttgcttccagcaaacttagctcactgcctc-tccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaat 199  Q
     |||||||| || ||| |||||||||||| || | | | |   |||||| ||||||  | |||||||| ||||||| ||||||||| |||||||||||||    
T  31109187 ccacgatttggcgtcctgcaaacttagcttacaggcacttgaaatcgtgccacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaat 31109088  T
Q  200 ttgaagccaattt 212  Q
    |||||||||||||    
T  31109087 ttgaagccaattt 31109075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 31 - 210
Target Start/End: Original strand, 2058419 - 2058597
Alignment:
Q  31 atgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctc 130  Q
    |||||||||| ||||||  |||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||| || ||| |||||| ||||||    
T  2058419 atgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctc 2058517  T
Q  131 actgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
    || ||  |||  |||||||||||||  | |||||||| ||||||| ||||||||| ||| ||||||||||||||||||||    
T  2058518 acggcacctcaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 2058597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 12406641 - 12406850
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    ||||||||||||| |||||||| ||| |||  ||| |||| ||||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  12406641 atcgtgtcacgatttgcaacggacccaaggtagacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 12406740  T
Q  101 gcacgattttgcttccagcaaacttagctcactgcctc-tccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaat 199  Q
     |||||||| || ||  |||||| |||||||| ||| | |   |||||||||||||  | |||||||| ||||||| ||||||||| ||| |||||||||    
T  12406741 ccacgatttggcgtcttgcaaac-tagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaat 12406839  T
Q  200 ttgaagccaat 210  Q
    |||||||||||    
T  12406840 ttgaagccaat 12406850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 4873505 - 4873714
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    ||||||||||||| |||||||| ||| |||| ||| |||| ||||||| |||||||||| ||||||||||||||| |||||||||||||||| |||||||    
T  4873505 atcgtgtcacgatttgcaacggacccaaggaagacaagtccttatcagtgatacttaacgagcaagtttctgaattgtgtcacgatttcccaagatcgtg 4873604  T
Q  101 gcacgattttgcttccagcaaacttagctcactgcctc-tccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaat 199  Q
     |||||||| || ||| |||||| || || || ||| | |   |||||||||||||  | |||||||| ||||||| ||||||||| ||| |||||||||    
T  4873605 ccacgatttggcgtcctgcaaac-tatcttacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaat 4873703  T
Q  200 ttgaagccaat 210  Q
    |||||||||||    
T  4873704 ttgaagccaat 4873714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 31 - 210
Target Start/End: Original strand, 21640237 - 21640416
Alignment:
Q  31 atgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctc 130  Q
    |||||||||| ||||||| |||||||||  |||||||||||||||||||||||||||||||| ||||||| |||||||| || ||| |||||| ||||||    
T  21640237 atgaccagtccttatcagtgatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaaac-tagctc 21640335  T
Q  131 actgcctctc-cgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
    || ||  |||   |||||||||||||  | |||||||| ||||||| ||||||||| ||| ||||||||||||||||||||    
T  21640336 acggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 21640416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 219 - 534
Target Start/End: Original strand, 34803140 - 34803442
Alignment:
Q  219 aagaccaagaatatctttgaatttgacaatggattcaagtctagcggcgatattttccaacttacaaaacatatctctttcttcaaagttgaaaaagcga 318  Q
    |||||||||||||||||||||||| | |||| ||||||||||||  || || ||||| |||||| ||| |||||| ||||||||||||||||||| ||||    
T  34803140 aagaccaagaatatctttgaattttagaatgtattcaagtctagaagctatgttttctaacttaaaaaccatatccctttcttcaaagttgaaaaggcga 34803239  T
Q  319 gagaagtagttaagagtactcacctgcttctccttgttcttggaaatagaaactttagtagagatgtgatcgagagggtcgtcagctatatagagagcat 418  Q
     ||||          |||||||||| ||| | |||   |   | | | |   |||||||||| |||||||| | | |||| ||||||| ||| | ||| |    
T  34803240 tagaa----------gtactcacctcctttttctt---ccgagtagttgcggctttagtagaaatgtgatccaaaaggtcatcagctacataaacagcgt 34803326  T
Q  419 ctttgaggtcatcaagccagttgttaacagcagagtctttgacttgtttctgttcagcatcattaaggacagcttcaacagcataaagagtgttcttcaa 518  Q
    ||||||||||||| ||||||||||||||||||||||||||||  ||||||| ||| ||||||| ||| |||||||| || |||||  |||| ||||||||    
T  34803327 ctttgaggtcatcgagccagttgttaacagcagagtctttgatctgtttctattccgcatcataaagaacagcttctactgcatatggagtattcttcaa 34803426  T
Q  519 cctttgcaccagattg 534  Q
    || ||| |||| ||||    
T  34803427 ccgttgtaccaaattg 34803442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 32 - 210
Target Start/End: Complemental strand, 20357213 - 20357035
Alignment:
Q  32 tgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctca 131  Q
    ||||| ||| ||||||  |||||||||| |||||||||||||||| ||||||||||||||| ||||||| |||||||| || ||| |||||| |||||||    
T  20357213 tgaccggtccttatcaaggatacttaacgagcaagtttctgaatcatgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctca 20357115  T
Q  132 ctgc-ctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
    | || |  |   |||||||||||||  | |||||||| ||||||| ||||||||| ||| ||||||||||||||||||||    
T  20357114 cggcaccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 20357035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 18392563 - 18392773
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggat-gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgt 99  Q
    ||||||||||||| |||  | ||||| ||||  |||||||| ||||||  |||||||||| ||||||||||   ||||||||||||||| ||   |||||    
T  18392563 atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgt 18392662  T
Q  100 ggcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaat 199  Q
    | ||||| |||||  || |||| | |||||||| ||  |||| |||||||||||||| | |||||||| ||||||| | ||||||| |||||||||||||    
T  18392663 gtcacgaatttgcaccctgcaaccctagctcacggcacctccaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccaaaccacaaat 18392762  T
Q  200 ttgaagccaat 210  Q
    |||||| ||||    
T  18392763 ttgaagacaat 18392773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 12397289 - 12397390
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    ||||||||||||| |||||||| ||| |||  ||| |||| ||||||| |||||||||| |||||||||||||||||||||||||||||||| |||| ||    
T  12397289 atcgtgtcacgatttgcaacggacccaaggtagacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcatg 12397388  T
Q  101 gc 102  Q
    ||    
T  12397389 gc 12397390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 31 - 218
Target Start/End: Complemental strand, 24789613 - 24789426
Alignment:
Q  31 atgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctc 130  Q
    |||||||||| ||||||  |||||||||| ||||||||||  |||||||||||||||||||| ||||||| |||||||| ||  || |||||| ||||||    
T  24789613 atgaccagtccttatcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgccacgatttggcaccctgcaaac-tagctc 24789515  T
Q  131 actgcctctc-cgatcgtgtcacgattgccaaa-tcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 218  Q
    || ||  | |   |||||||||||| ||||||| ||||| ||||||| | ||||||| ||| ||||||||||||||| ||| | ||||||    
T  24789514 acggcaccacgaaatcgtgtcacga-tgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 24789426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 31 - 218
Target Start/End: Original strand, 21646456 - 21646643
Alignment:
Q  31 atgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctc 130  Q
    |||||||||  ||||||  |||||||||| |||||||||   |||||||||||||||| ||| ||||||| |||||||| ||  || ||||||  |||||    
T  21646456 atgaccagttcttatcaaggatacttaacgagcaagtttgaaaatcgtgtcacgattttccaagatcgtgtcacgatttggcaccctgcaaacc-agctc 21646554  T
Q  131 actgcctctccga-tcgtgtcacgattgccaaa-tcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 218  Q
    || || || |  | ||||||||||| ||||||| | ||| ||||||| ||||||||| ||||||||||||||||||||||| | ||||||    
T  21646555 acggcatcacgaaatcgtgtcacga-tgccaaatttgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatgtcaaca 21646643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 143 - 218
Target Start/End: Original strand, 21983792 - 21983867
Alignment:
Q  143 atcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 218  Q
    |||||||||||||    |||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  21983792 atcgtgtcacgatgatgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaattttcaaca 21983867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 6592704 - 6592914
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggat-gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgt 99  Q
    ||||||||||||| |||  | ||||| ||||  |||||||| ||||||  |||||||||| |||||||||||| ||||||||||||||| ||   |||||    
T  6592704 atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgt 6592803  T
Q  100 ggcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaat 199  Q
    | ||||||||     || |||| | |||||||| || ||    |||||||||||||  | |||||||| ||||||| | ||||||| ||| |||||||||    
T  6592804 gccacgatttgcacccctgcaaccctagctcacggcatccgaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaat 6592903  T
Q  200 ttgaagccaat 210  Q
    |||||| ||||    
T  6592904 ttgaagacaat 6592914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 33 - 210
Target Start/End: Complemental strand, 20343684 - 20343507
Alignment:
Q  33 gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctcac 132  Q
    |||||||| ||||||  |||||||||| ||||||||||   |||||||||||||||||||  |||||| ||||||||||| ||| || ||| ||||||||    
T  20343684 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgacacgattttgcatccggc-aacctagctcac 20343586  T
Q  133 tgcctctccg--atcgtgtcacgattgcca-aatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
     | | | |||  |||||||||||| ||||| ||||| | ||||||| | ||||||| ||| ||||||||||||||| ||||    
T  20343585 -ggcaccccgaaatcgtgtcacga-tgccacaatcgcgtcacgatttccctgttcttccagaccacaaatttgaagacaat 20343507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 143 - 228
Target Start/End: Original strand, 21989456 - 21989541
Alignment:
Q  143 atcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaacaaagaccaaga 228  Q
    |||||||||||||    ||||| || ||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||| ||||    
T  21989456 atcgtgtcacgatgatgaaatcttgtcacgatttctctgttcttccaaaccacaaatttgaagccaactttcaacaaagacaaaga 21989541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 33 - 220
Target Start/End: Complemental strand, 48408583 - 48408396
Alignment:
Q  33 gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctcac 132  Q
    |||||||| |||||  ||| ||||||| |||||||||   ||||||||||||||||| || ||||||| |||||||| ||  || ||||||  |||||||    
T  48408583 gaccagtccttatcctagaaacttaacgagcaagtttgcaaatcgtgtcacgatttctcaagatcgtgtcacgatttggcaccctgcaaacc-agctcac 48408485  T
Q  133 tgcctctccga-tcgtgtcacgattgccaaat-cgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaacaaa 220  Q
     || || |  | |||||||||||| ||||||| |||| ||||||| |||||||||  || ||||||||||||||||||| | ||||||||    
T  48408484 ggcatcacaaaatcgtgtcacgat-gccaaattcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaaatctcaacaaa 48408396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 33 - 218
Target Start/End: Complemental strand, 39731118 - 39730933
Alignment:
Q  33 gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctcac 132  Q
    |||||||| ||||||  || ||||||| |||||||||   ||||||||||||||| | || ||||||| |||||||| ||  || ||||||  |||||||    
T  39731118 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattcctcaagatcgtgtcacgatttggcaccctgcaaacc-agctcac 39731020  T
Q  133 tgcctctccga-tcgtgtcacgattgccaaat-cgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 218  Q
     || || |  | |||||||||||| ||||||| |||| ||||||| ||||||||| ||| ||||||||||||||||||| | ||||||    
T  39731019 ggcatcacaaaatcgtgtcacgat-gccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatctcaaca 39730933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 33 - 206
Target Start/End: Original strand, 43504536 - 43504709
Alignment:
Q  33 gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctcac 132  Q
    |||||||| ||||||  || ||||||| |||||||||   |||||||||||||||||||| ||||||| |||||||| ||  || ||||||  |||||||    
T  43504536 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacgatcgtgtcacgatttggcaccctgcaaac-cagctcac 43504634  T
Q  133 tgcctctc-cgatcgtgtcacgattgccaaa-tcgtgacacgattcctctgttctcccaaaccacaaatttgaagc 206  Q
     || || |   |||||||||||| ||||||| ||||| ||||||| | ||||||| ||| ||||||||||||||||    
T  43504635 ggcatcacgaaatcgtgtcacga-tgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagc 43504709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 143 - 218
Target Start/End: Original strand, 47264192 - 47264267
Alignment:
Q  143 atcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 218  Q
    |||||||||||||  | |||||||| ||||||| |||| |||| ||||||||||||||||||||||| ||||||||    
T  47264192 atcgtgtcacgatgccaaaatcgtgtcacgatttctctattcttccaaaccacaaatttgaagccaaatttcaaca 47264267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 6594920 - 6595130
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggat-gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgt 99  Q
    ||||||||||||| |||  | ||||| ||||  |||||||| ||||||  |||||||||| |||||||||||| ||||||||||||||| ||   |||||    
T  6594920 atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgt 6595019  T
Q  100 ggcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaat 199  Q
    | ||||||||     || |||| | |||||||| || ||    |||||||||||||  | |||||||| ||||||| | ||||| | ||| |||||||||    
T  6595020 gccacgatttgcacccctgcaaccctagctcacggcatccgaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgtttttccagaccacaaat 6595119  T
Q  200 ttgaagccaat 210  Q
    |||||| ||||    
T  6595120 ttgaagacaat 6595130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 32060671 - 32060881
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggat-gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgt 99  Q
    ||||||||||||| |||  | ||||| ||||  |||||||| ||||||  |||||||||| |||||||||||  ||||||||||||||| ||   |||||    
T  32060671 atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaatcgt 32060770  T
Q  100 ggcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaat 199  Q
    | ||||||||     || |||| | |||||||| || ||    |||||||||||||  | |||||||| ||||||| | ||||||| ||| |||||||||    
T  32060771 gccacgatttgcacccctgcaaccctagctcacggcatccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaat 32060870  T
Q  200 ttgaagccaat 210  Q
    |||||| ||||    
T  32060871 ttgaagacaat 32060881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 143 - 219
Target Start/End: Complemental strand, 44847694 - 44847618
Alignment:
Q  143 atcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaacaa 219  Q
    |||||||||||||  | |||||||| ||||||| |||||||||   ||||||||||||||||||||| |||||||||    
T  44847694 atcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttttaaaccacaaatttgaagccaaatttcaacaa 44847618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 34 - 109
Target Start/End: Complemental strand, 1533087 - 1533012
Alignment:
Q  34 accagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattt 109  Q
    ||||||| ||||||  |||||||||| || |||||||  |||||||||||||||||||| ||||||| ||||||||    
T  1533087 accagtccttatcaaggatacttaacgagtaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgattt 1533012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 143 - 218
Target Start/End: Original strand, 2479885 - 2479960
Alignment:
Q  143 atcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 218  Q
    |||||||||||||  | |||||||| ||| ||| |||||||||  |||||||||||||||||||||| ||||||||    
T  2479885 atcgtgtcacgatgccaaaatcgtgtcacaatttctctgttcttacaaaccacaaatttgaagccaaatttcaaca 2479960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 33 - 218
Target Start/End: Original strand, 18414090 - 18414275
Alignment:
Q  33 gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctcac 132  Q
    |||||||| ||||||  || ||||||| |||||||||  ||||||||| ||||||||||| ||||||| |||||||| ||  || ||||||  |||||||    
T  18414090 gaccagtccttatcatggaaacttaacaagcaagtttgagaatcgtgttacgatttcccaagatcgtgtcacgatttggcgccctgcaaac-cagctcac 18414188  T
Q  133 tgcctctc-cgatcgtgtcacgattgccaaa-tcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 218  Q
     ||  | |   |||||| ||||| ||||||| ||||| ||||||| ||||||||| ||| |||| |||||||||||||| | ||||||    
T  18414189 ggcaccacaaaatcgtgccacga-tgccaaattcgtgtcacgatttctctgttcttccagaccataaatttgaagccaaatctcaaca 18414275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 144 - 218
Target Start/End: Complemental strand, 1532958 - 1532884
Alignment:
Q  144 tcgtgtcacgattgccaaat-cgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 218  Q
    |||||||||||| ||||||| |||| ||||||| ||||||||| ||| ||||||||||||||||||| | ||||||    
T  1532958 tcgtgtcacgat-gccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatatcaaca 1532884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 12397418 - 12397485
Alignment:
Q  143 atcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
    |||||||||||||  | |||||||| | ||||| ||||||||| ||| ||||||||||||||||||||    
T  12397418 atcgtgtcacgataccaaaatcgtgtcgcgatttctctgttcttccagaccacaaatttgaagccaat 12397485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 33 - 218
Target Start/End: Original strand, 18409214 - 18409399
Alignment:
Q  33 gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctcac 132  Q
    |||||||| ||||||  || ||||||| |||||||||  |||||||||||||||||| || ||||||| || ||||| ||  || ||||||  |||||||    
T  18409214 gaccagtccttatcatggaaacttaacaagcaagtttgagaatcgtgtcacgatttctcaagatcgtgtcatgatttggcaccctgcaaac-cagctcac 18409312  T
Q  133 tgcctctc-cgatcgtgtcacgattgccaaa-tcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 218  Q
     ||  | |   |||||||||||| ||||||| |||||  |||||| ||||||||| ||| | ||||||||||||||||| | ||||||    
T  18409313 ggcaccacaaaatcgtgtcacga-tgccaaattcgtgttacgatttctctgttcttccagaacacaaatttgaagccaaatctcaaca 18409399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 160 - 210
Target Start/End: Original strand, 79955 - 80005
Alignment:
Q  160 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
    |||||||| ||||||| ||||||||| ||||| ||||||||||||||||||    
T  79955 aaatcgtgtcacgatttctctgttcttccaaatcacaaatttgaagccaat 80005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 33 - 109
Target Start/End: Original strand, 1562403 - 1562479
Alignment:
Q  33 gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattt 109  Q
    |||||||| ||||||  |||||||||| ||||||||||   ||||||||||||||| |||  |||||| ||||||||    
T  1562403 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttaccaaaatcgtgacacgattt 1562479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 1562513 - 1562580
Alignment:
Q  143 atcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
    |||||||||||||  | |||||||| ||||||| | ||||||| ||| ||||||||||||||| ||||    
T  1562513 atcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 1562580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 18389127 - 18389215
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggat-gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgattt 88  Q
    ||||||||||||| |||  | ||||| ||||  |||||||| ||||||  |||||||||| ||||||||||   |||||||||||||||    
T  18389127 atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattt 18389215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 53 - 109
Target Start/End: Original strand, 25767381 - 25767437
Alignment:
Q  53 acttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattt 109  Q
    ||||||| |||||||||   ||||||||||||||||||||  |||||| ||||||||    
T  25767381 acttaacgagcaagtttgaaaatcgtgtcacgatttcccaaaatcgtgtcacgattt 25767437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 160 - 211
Target Start/End: Complemental strand, 46515860 - 46515808
Alignment:
Q  160 aaatcgtgacacgattcctctgttctcccaaa-ccacaaatttgaagccaatt 211  Q
    |||||||| ||||||| ||||||||| ||||| ||| ||||||||||||||||    
T  46515860 aaatcgtgtcacgatttctctgttcttccaaaaccataaatttgaagccaatt 46515808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 167; Significance: 3e-89; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 2672635 - 2672417
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  2672635 atcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 2672536  T
Q  101 gcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatt 200  Q
    ||||||||||||||||||||||||| |||| | || |||||||||||||||||||| | |||||||||||||||||||||||||| ||| ||||||||||    
T  2672535 gcacgattttgcttccagcaaacttggctcccggcatctccgatcgtgtcacgattacaaaatcgtgacacgattcctctgttcttccagaccacaaatt 2672436  T
Q  201 tgaagccaattttcaacaa 219  Q
    ||||||||| || ||||||    
T  2672435 tgaagccaaattccaacaa 2672417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 8512611 - 8512821
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    |||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  8512611 atcgtgtcacgatctgcaacggtccccaagttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 8512710  T
Q  101 gcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatt 200  Q
     ||||||||||||||||||||||||||||||||||||| | ||||||||||||| ||| |||||||||||||||||||||||||||||||||||| ||||    
T  8512711 ccacgattttgcttccagcaaacttagctcactgcctccctgatcgtgtcacgactgcaaaatcgtgacacgattcctctgttctcccaaaccactaatt 8512810  T
Q  201 tgaagccaatt 211  Q
    ||||| |||||    
T  8512811 tgaagtcaatt 8512821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 32475855 - 32476072
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    ||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  32475855 atcgtgtcacgatatgcaacggtccccaagatgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 32475954  T
Q  101 gcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatt 200  Q
     ||||||||||||| |||  ||||| |||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  32475955 tcacgattttgctttcagagaacttggctcactgcctccctgatcgtgtcacgatggccaaatcgtgacacgattcctctgttctcccaaaccacaaatt 32476054  T
Q  201 tgaagccaattttcaaca 218  Q
    |||||||||| |||||||    
T  32476055 tgaagccaatcttcaaca 32476072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 32480713 - 32480930
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    ||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  32480713 atcgtgtcacgatatgcaacggtccccaagatgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 32480812  T
Q  101 gcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatt 200  Q
     ||||||||||||| |||  ||||| |||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  32480813 tcacgattttgctttcagagaacttggctcactgcctccctgatcgtgtcacgatggccaaatcgtgacacgattcctctgttctcccaaaccacaaatt 32480912  T
Q  201 tgaagccaattttcaaca 218  Q
    |||||||||| |||||||    
T  32480913 tgaagccaatcttcaaca 32480930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 163; E-Value: 8e-87
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 8517491 - 8517701
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    |||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  8517491 atcgtgtcacgatctgcaacggtccccaagttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 8517590  T
Q  101 gcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatt 200  Q
     ||||||||||||||||||||||||||||||||||||| | ||||||||||||| ||| |||||||||||||||||||||||||||| ||||||| ||||    
T  8517591 ccacgattttgcttccagcaaacttagctcactgcctccctgatcgtgtcacgactgcaaaatcgtgacacgattcctctgttctcctaaaccactaatt 8517690  T
Q  201 tgaagccaatt 211  Q
    ||||| |||||    
T  8517691 tgaagtcaatt 8517701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 24968488 - 24968698
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    |||||| |||||| |||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  24968488 atcgtggcacgatttgcaacggtccccaggttgaccagtccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 24968587  T
Q  101 gcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatt 200  Q
     |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||    
T  24968588 ccacgattttgcttccagcaaacttggctcactgcctccccgatcgtgtcacgattgccaaatcgtgacacgattcctttgttcttccaaaccactaatt 24968687  T
Q  201 tgaagccaatt 211  Q
    ||||| |||||    
T  24968688 tgaagtcaatt 24968698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 158; E-Value: 8e-84
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 2676791 - 2676574
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  2676791 atcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagagattcttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 2676692  T
Q  101 gcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatt 200  Q
    ||||||||||||||||||||||||| |||| |  | |||||||||||||||||||| | |||||||||||||||||||||||||| ||| ||||||||||    
T  2676691 gcacgattttgcttccagcaaacttggctcccgacatctccgatcgtgtcacgattacaaaatcgtgacacgattcctctgttcttccagaccacaaatt 2676592  T
Q  201 tgaagccaattttcaaca 218  Q
    ||||||||| || |||||    
T  2676591 tgaagccaaattccaaca 2676574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 18656812 - 18657022
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  18656812 atcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 18656911  T
Q  101 gcacgattttgcttccagcaaacttagctcactgcctctc-cgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaat 199  Q
     |||||||| || ||| ||||||||   |||| ||  | |   |||||||||||||  | |||||||| || |||| |||||||||  || |||||||||    
T  18656912 tcacgatttggcgtcctgcaaacttgcttcacggcaccacgaaatcgtgtcacgatgccaaaatcgtgtcatgatttctctgttctttcagaccacaaat 18657011  T
Q  200 ttgaagccaat 210  Q
    |||||||||||    
T  18657012 ttgaagccaat 18657022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 22172878 - 22172669
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    ||||||||||||| ||||||||  || ||| ||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||    
T  22172878 atcgtgtcacgatttgcaacggaaccaaggttgaccagtccttatcagagatccttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 22172779  T
Q  101 gcacgattttgcttccagcaaacttagctcactgcctctc-cgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaat 199  Q
     |||||||| || ||| |||||| | |||||| ||  |||   |||||||||||||  | |||||||| ||||||| ||||||||| ||| |||||||||    
T  22172778 ccacgatttggcgtcctgcaaac-tggctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaat 22172680  T
Q  200 ttgaagccaat 210  Q
    |||||||||||    
T  22172679 ttgaagccaat 22172669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 31 - 210
Target Start/End: Complemental strand, 40372442 - 40372263
Alignment:
Q  31 atgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctc 130  Q
    |||||||||| ||||||  |||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||| || ||| |||||| ||||||    
T  40372442 atgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctc 40372344  T
Q  131 actgcctctc-cgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
    || ||  |||   |||||||||||||  | |||||||| ||||||| ||||||||| ||| ||||||||||||||||||||    
T  40372343 acggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 40372263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 28503535 - 28503326
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    ||||||||||||| |||  | | ||| ||| |||| |||| ||||||| |||||||||| ||||||||||||||| |||||||||||||||| |||||||    
T  28503535 atcgtgtcacgatttgcgtctgacccaaggttgacaagtccttatcagggatacttaacgagcaagtttctgaattgtgtcacgatttcccaagatcgtg 28503436  T
Q  101 gcacgattttgcttccagcaaacttagctcactgcctc-tccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaat 199  Q
     |||||||| || |||||||||| |||||||| ||| | |   |||||||||||||  | |||||||| ||||||| ||||||||| |||  ||||||||    
T  28503435 ccacgatttggcgtccagcaaac-tagctcacggccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaggccacaaat 28503337  T
Q  200 ttgaagccaat 210  Q
    |||||||||||    
T  28503336 ttgaagccaat 28503326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 31 - 210
Target Start/End: Original strand, 8477816 - 8477995
Alignment:
Q  31 atgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctc 130  Q
    |||||||||| ||||||  |||||||||| ||||||||||| |||||||||||||||||||| ||||||| |||||||| || |||||||||| ||||||    
T  8477816 atgaccagtccttatcaaggatacttaacgagcaagtttctcaatcgtgtcacgatttcccaagatcgtgccacgatttggcatccagcaaac-tagctc 8477914  T
Q  131 actgcctctc-cgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
    || ||  |||   |||||||||||||  | |||||||| ||| ||| ||||||||| ||| ||||||||||||||||||||    
T  8477915 acggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacaatttctctgttcttccagaccacaaatttgaagccaat 8477995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 31 - 210
Target Start/End: Original strand, 7167696 - 7167875
Alignment:
Q  31 atgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctc 130  Q
    |||||||||| ||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||| || ||| |||||| ||||||    
T  7167696 atgaccagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctc 7167794  T
Q  131 actgc-ctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
    || || |  |   || ||||||||||  | |||||||| ||||||| ||||||||| ||| | ||||||||||||||||||    
T  7167795 acggcaccttgaaattgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaacacaaatttgaagccaat 7167875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 32 - 210
Target Start/End: Complemental strand, 28501337 - 28501159
Alignment:
Q  32 tgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctca 131  Q
    |||| |||| ||||||| |||||||||| |||||||||||||||||||||||||||| ||| ||||||| |||||||| |  ||| |||||| |||||||    
T  28501337 tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgatttggtgtcctgcaaac-tagctca 28501239  T
Q  132 ctgcctc-tccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
    | ||| | |   |||||||||||||  | |||||||| ||||||| ||||||||| |||  |||||||||||||||||||    
T  28501238 cggccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaggccacaaatttgaagccaat 28501159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 31 - 124
Target Start/End: Complemental strand, 8738709 - 8738616
Alignment:
Q  31 atgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaact 124  Q
    |||||||||| ||||||  |||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||| || ||| |||||||    
T  8738709 atgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttagcgtcctgcaaact 8738616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 31 - 124
Target Start/End: Complemental strand, 9090947 - 9090854
Alignment:
Q  31 atgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaact 124  Q
    |||||||||| ||||||  |||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||| || ||| |||||||    
T  9090947 atgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttagcgtcctgcaaact 9090854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 27352298 - 27352189
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccagg-atgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgt 99  Q
    ||||||||||||| |||  | ||||| ||| |||||||||| ||||||| |||| ||||| |||||||||||||||||||||||||||||||| ||||||    
T  27352298 atcgtgtcacgatttgcgtccgtcccaaggtatgaccagtccttatcagtgataattaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgt 27352199  T
Q  100 ggcacgattt 109  Q
    | ||||||||    
T  27352198 gccacgattt 27352189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 31 - 124
Target Start/End: Complemental strand, 2671251 - 2671158
Alignment:
Q  31 atgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaact 124  Q
    |||||||||| ||||||  |||||||||| ||||||||||| |||||||||||||||||||| ||||||| |||||||| || ||| |||||||    
T  2671251 atgaccagtccttatcaaggatacttaacgagcaagtttctaaatcgtgtcacgatttcccaagatcgtgccacgatttggcatcctgcaaact 2671158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 33 - 210
Target Start/End: Complemental strand, 54634894 - 54634717
Alignment:
Q  33 gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctcac 132  Q
    |||||||| ||||||  |||||||||| ||||||||||   |||||||||||||||||||  |||||| |||||||||||  || || ||||||||||||    
T  54634894 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgccacgattttgcaccctgc-aacttagctcac 54634796  T
Q  133 tgcctctccg--atcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
     | | | |||  |||||||||| ||  | |||||||| ||||||| | ||||||| ||| ||||||||||||||| ||||    
T  54634795 -ggcaccccgaaatcgtgtcacaatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 54634717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 4598889 - 4599100
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggat-gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccag-gatcg 98  Q
    ||||||||||||| |||  | ||||| ||||  |||||||| ||||||  |||||||||| |||||||||||  ||||||||||||||||||||  ||||    
T  4598889 atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgatttcccagaaatcg 4598988  T
Q  99 tggcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaa 198  Q
    || ||||||||     || |||| | |||||||| || ||    |||||||| ||||  | |||||||| ||||||| | ||||||| ||||||||||||    
T  4598989 tgccacgatttgcacccctgcaaccctagctcacggcatccgaaatcgtgtcgcgatcccaaaatcgtgtcacgatttccctgttcttccaaaccacaaa 4599088  T
Q  199 tttgaagccaat 210  Q
    ||||||| ||||    
T  4599089 tttgaagacaat 4599100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 4601110 - 4601321
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggat-gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccag-gatcg 98  Q
    ||||||||||||| |||  | ||||| ||||  |||||||| ||||||  |||||||||| |||||||||||  ||||||||||||||||||||  ||||    
T  4601110 atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgatttcccagaaatcg 4601209  T
Q  99 tggcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaa 198  Q
    || ||||||||     || |||| | |||||||| || ||    |||||||| ||||  | |||||||| ||||||| | ||||||| ||||||||||||    
T  4601210 tgccacgatttgcacccctgcaaccctagctcacggcatccgaaatcgtgtcgcgatcccaaaatcgtgtcacgatttccctgttcttccaaaccacaaa 4601309  T
Q  199 tttgaagccaat 210  Q
    ||||||| ||||    
T  4601310 tttgaagacaat 4601321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 160 - 221
Target Start/End: Original strand, 21711768 - 21711829
Alignment:
Q  160 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaacaaag 221  Q
    |||||||| ||||||| ||||||||| |||||||||||||||||||||||||| ||||||||    
T  21711768 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatttacaacaaag 21711829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 33 - 210
Target Start/End: Complemental strand, 6716269 - 6716092
Alignment:
Q  33 gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctcac 132  Q
    |||||||| ||||||  |||||||||| ||||||||||   |||||||||||||||||||  |||||| |||||||||||  || || ||| ||||||||    
T  6716269 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgacacgattttgcaccctgc-aacctagctcac 6716171  T
Q  133 tgcctctccg--atcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
     | | | |||  |||||||||||||  | |||||||| ||||||| | ||||||| ||| ||||||||||| ||| ||||    
T  6716170 -ggcaccccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttcaagacaat 6716092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 160 - 218
Target Start/End: Complemental strand, 27974491 - 27974433
Alignment:
Q  160 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 218  Q
    |||||||| ||||||| ||||||||| ||||||||||||||||||||||| ||||||||    
T  27974491 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatttcaaca 27974433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 160 - 218
Target Start/End: Complemental strand, 39032075 - 39032017
Alignment:
Q  160 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 218  Q
    |||||||| ||||||| ||||||||| |||||| |||||||||||||||||||||||||    
T  39032075 aaatcgtgtcacgatttctctgttcttccaaacaacaaatttgaagccaattttcaaca 39032017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 143 - 220
Target Start/End: Original strand, 37726224 - 37726301
Alignment:
Q  143 atcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaacaaa 220  Q
    |||||||||||||  | || ||||| ||||||| ||||||||| ||||||||||||||||||||||| | ||||||||    
T  37726224 atcgtgtcacgatatcaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaacaaa 37726301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 27027273 - 27027333
Alignment:
Q  160 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaacaaa 220  Q
    |||||||| ||||||| ||||||||| ||||||||||||||||||| | ||||||||||||    
T  27027273 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagtctattttcaacaaa 27027333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 27038608 - 27038668
Alignment:
Q  160 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaacaaa 220  Q
    |||||||| ||||||| ||||||| | |||||||||||| |||||||||||||||||||||    
T  27038608 aaatcgtgtcacgatttctctgtttttccaaaccacaaacttgaagccaattttcaacaaa 27038668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 33 - 112
Target Start/End: Complemental strand, 6718453 - 6718374
Alignment:
Q  33 gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgc 112  Q
    |||||||| ||||||  |||||||||| ||||||||||   |||||||||||||||||||  |||||| |||||||||||    
T  6718453 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgacacgattttgc 6718374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 10056023 - 10055817
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggat-gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacga-tttcccaggatcg 98  Q
    ||||||||||||| |||  | ||||| ||||  |||||||| ||||||  |||||||||| |||||||||||  |||||||||||| |||||||  ||||    
T  10056023 atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcg 10055924  T
Q  99 tggcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaa 198  Q
    || ||||||||     || |||| | || ||||| || ||    |||| ||||||||  | |||||||| ||||||| | ||||||| ||||||||||||    
T  10055923 tgtcacgatttgcacccctgcaaccctaactcacggcatccgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaa 10055824  T
Q  199 tttgaag 205  Q
    |||||||    
T  10055823 tttgaag 10055817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 10067133 - 10066927
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggat-gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacga-tttcccaggatcg 98  Q
    ||||||||||||| |||  | ||||| ||||  |||||||| ||||||  |||||||||| |||||||||||  |||||||||||| |||||||  ||||    
T  10067133 atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcg 10067034  T
Q  99 tggcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaa 198  Q
    || ||||||||     || |||| | || ||||| || ||    |||| ||||||||  | |||||||| ||||||| | ||||||| ||||||||||||    
T  10067033 tgtcacgatttgcacccctgcaaccctaactcacggcatccgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaa 10066934  T
Q  199 tttgaag 205  Q
    |||||||    
T  10066933 tttgaag 10066927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 160 - 210
Target Start/End: Complemental strand, 30709316 - 30709266
Alignment:
Q  160 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
    |||||||| ||||||| ||||||||| ||||||||||||||||||||||||    
T  30709316 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 30709266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 160 - 210
Target Start/End: Original strand, 36029659 - 36029709
Alignment:
Q  160 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
    |||||||| ||||||| ||||||||| ||||||||||||||||||||||||    
T  36029659 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 36029709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 53 - 218
Target Start/End: Original strand, 1306439 - 1306604
Alignment:
Q  53 acttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctcactgcctctccg--atcgtgtc 150  Q
    ||||||| |||||||||  ||||||||||||||||||||| ||||||| |||||||| ||  || ||||||  ||||||| | | |  ||  ||||||||    
T  1306439 acttaacgagcaagtttgagaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaac-cagctcac-gacaccacgaaatcgtgtc 1306536  T
Q  151 acgattgccaaa-tcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 218  Q
    |||| ||||||| || || ||||||| ||||||||| ||| |||| |||||||||||||| | ||||||    
T  1306537 acga-tgccaaattcatgtcacgatttctctgttcttccagaccataaatttgaagccaaatctcaaca 1306604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 33 - 205
Target Start/End: Complemental strand, 10058212 - 10058039
Alignment:
Q  33 gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacga-tttcccaggatcgtggcacgattttgcttccagcaaacttagctca 131  Q
    |||||||| ||||||  |||||||||| |||||||||||  |||||||||||| |||||||  |||||| ||||||||     || |||| | || ||||    
T  10058212 gaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaaccctaactca 10058113  T
Q  132 ctgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaag 205  Q
    | || ||    |||| ||||||||  | |||||||| ||||||| | ||||||| |||||||||||||||||||    
T  10058112 cggcatccgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 10058039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 33 - 205
Target Start/End: Complemental strand, 10060434 - 10060261
Alignment:
Q  33 gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacga-tttcccaggatcgtggcacgattttgcttccagcaaacttagctca 131  Q
    |||||||| ||||||  |||||||||| |||||||||||  |||||||||||| |||||||  |||||| ||||||||     || |||| | || ||||    
T  10060434 gaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaaccctaactca 10060335  T
Q  132 ctgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaag 205  Q
    | || ||    |||| ||||||||  | |||||||| ||||||| | ||||||| |||||||||||||||||||    
T  10060334 cggcatccgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 10060261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 33 - 205
Target Start/End: Complemental strand, 10062656 - 10062483
Alignment:
Q  33 gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacga-tttcccaggatcgtggcacgattttgcttccagcaaacttagctca 131  Q
    |||||||| ||||||  |||||||||| |||||||||||  |||||||||||| |||||||  |||||| ||||||||     || |||| | || ||||    
T  10062656 gaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaaccctaactca 10062557  T
Q  132 ctgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaag 205  Q
    | || ||    |||| ||||||||  | |||||||| ||||||| | ||||||| |||||||||||||||||||    
T  10062556 cggcatccgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 10062483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 33 - 205
Target Start/End: Complemental strand, 10064878 - 10064705
Alignment:
Q  33 gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacga-tttcccaggatcgtggcacgattttgcttccagcaaacttagctca 131  Q
    |||||||| ||||||  |||||||||| |||||||||||  |||||||||||| |||||||  |||||| ||||||||     || |||| | || ||||    
T  10064878 gaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttgcacccctgcaaccctaactca 10064779  T
Q  132 ctgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaag 205  Q
    | || ||    |||| ||||||||  | |||||||| ||||||| | ||||||| |||||||||||||||||||    
T  10064778 cggcatccgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 10064705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 25637230 - 25637121
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggat-gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgt 99  Q
    ||||||||||||| |||  | ||||| ||||  |||||||| ||||||  |||||||||| ||||||||||   |||||||||||||||||||  |||||    
T  25637230 atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgt 25637131  T
Q  100 ggcacgattt 109  Q
    | ||||||||    
T  25637130 gccacgattt 25637121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 143 - 219
Target Start/End: Complemental strand, 26928155 - 26928079
Alignment:
Q  143 atcgtgtcacgattgccaaat-cgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaacaa 219  Q
    ||||||||||||| ||||||| |||| ||||||| ||||||||| ||| ||||||||||||||||||| | |||||||    
T  26928155 atcgtgtcacgat-gccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatctcaacaa 26928079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 143 - 218
Target Start/End: Original strand, 23200654 - 23200729
Alignment:
Q  143 atcgtgtcacgattgccaaa-tcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 218  Q
    |||||||||||| ||||||| ||||| ||||||| ||||||||| ||| ||||||||||||||||||| | ||||||    
T  23200654 atcgtgtcacga-tgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatctcaaca 23200729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 143 - 218
Target Start/End: Complemental strand, 37408111 - 37408036
Alignment:
Q  143 atcgtgtcacgattgcca-aatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 218  Q
    ||||||||||||| |||| ||||||| ||||||| || |||||| ||||||||||||||||||||||| | ||||||    
T  37408111 atcgtgtcacgat-gccacaatcgtgtcacgatttctttgttcttccaaaccacaaatttgaagccaaatctcaaca 37408036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 169 - 220
Target Start/End: Complemental strand, 1730957 - 1730906
Alignment:
Q  169 cacgattcctctgttctcccaaaccacaaatttgaagccaattttcaacaaa 220  Q
    ||||||| ||||||||| |||||||||||||||||||||||||  |||||||    
T  1730957 cacgatttctctgttcttccaaaccacaaatttgaagccaattaacaacaaa 1730906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 143 - 218
Target Start/End: Original strand, 23198455 - 23198530
Alignment:
Q  143 atcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 218  Q
    |||||||||||||  | || ||||| ||||||| ||||||||| ||| ||||||||||||||||||| | ||||||    
T  23198455 atcgtgtcacgatgtcaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatctcaaca 23198530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 3617251 - 3617041
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggat-gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgt 99  Q
    ||||||||||||| |||  | ||||| ||||  |||||| | ||||||  |||||||||| ||||||||||   ||||||||||||||| ||   |||||    
T  3617251 atcgtgtcacgatttgcgtccgtcccaaggaacgaccagccgttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgt 3617152  T
Q  100 ggcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaat 199  Q
    | ||||||||     || |||| | |||||||| || ||    |||||||||||||  | |||||||| ||||||| | ||||||| ||| |||||||||    
T  3617151 gacacgatttgcacccctgcaaccctagctcacggcatccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaat 3617052  T
Q  200 ttgaagccaat 210  Q
    |||||| ||||    
T  3617051 ttgaagacaat 3617041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 160 - 210
Target Start/End: Original strand, 16264896 - 16264946
Alignment:
Q  160 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
    |||||||| ||||||| | ||||||| ||||||||||||||||||||||||    
T  16264896 aaatcgtgtcacgatttcgctgttcttccaaaccacaaatttgaagccaat 16264946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 40734132 - 40734087
Alignment:
Q  160 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaag 205  Q
    |||||||| ||||||| ||||||||| |||||||||||||||||||    
T  40734132 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 40734087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 492
Target Start/End: Original strand, 6060700 - 6060792
Alignment:
Q  400 tcagctatatagagagcatctttgaggtcatcaagccagttgttaacagcagagtctttgacttgtttctgttcagcatcattaaggacagct 492  Q
    ||||||| ||||| |||||||||||| ||||  ||||||||||| ||| |||| ||  ||  ||||||||  |||||||||||||| ||||||    
T  6060700 tcagctacatagacagcatctttgagatcattgagccagttgttgacatcagaatccctggtttgtttcttctcagcatcattaagcacagct 6060792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 218
Target Start/End: Complemental strand, 800850 - 800685
Alignment:
Q  53 acttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctcactgcctctc-cgatcgtgtca 151  Q
    ||||||| |||||||||   ||||||||||||||||||||  |||||| |||||||| ||  || ||||||  ||||||| || || |   |||||||||    
T  800850 acttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccccgcaaac-cagctcacggcatcacgaaatcgtgtca 800752  T
Q  152 cgattgccaaa-tcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 218  Q
    ||| ||||||| ||||| ||||||| | ||||||| ||| |||||||||| |||| ||| | ||||||    
T  800751 cga-tgccaaattcgtgtcacgatttccctgttcttccagaccacaaattcgaagacaaatctcaaca 800685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 10208996 - 10208785
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggat-gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacga-tttcccaggatcg 98  Q
    ||||||||||||| |||  | ||||| ||||  |||||||| ||||||  |||| ||||| |||||||||||  |||||||||||| |||||||  ||||    
T  10208996 atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatatttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcg 10208897  T
Q  99 tggcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaa 198  Q
    || ||||||||     || |||| | || ||||| || ||    |||| ||||||||  | |||||||| || |||| | ||||||| ||||||||||||    
T  10208896 tgccacgatttgcacccctgcaaccctaactcacggcatccgaaatcgcgtcacgataccaaaatcgtgtcatgatttccctgttcttccaaaccacaaa 10208797  T
Q  199 tttgaagccaat 210  Q
    ||||||| ||||    
T  10208796 tttgaagacaat 10208785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 10211196 - 10210985
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggat-gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacga-tttcccaggatcg 98  Q
    ||||||||||||| |||  | ||||| ||||  |||||||| ||||||  |||||||||| |||||||||||  ||||||||| || |||||||  ||||    
T  10211196 atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcatgattttcccaaaatcg 10211097  T
Q  99 tggcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaa 198  Q
    || ||||||||     || |||| | || ||||| || ||    |||| ||||||||  | |||||||| ||||||| | ||||||| ||||||||||||    
T  10211096 tgccacgatttgcacccctgcaaccctaactcacggcatcctaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaa 10210997  T
Q  199 tttgaagccaat 210  Q
    ||| ||| ||||    
T  10210996 tttaaagacaat 10210985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 218
Target Start/End: Complemental strand, 33386302 - 33386137
Alignment:
Q  53 acttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctcactgcctctccga-tcgtgtca 151  Q
    |||||||||||||||||   ||||||||||||||| | ||  |||||| |||||||| ||  || ||||||  ||||||| || || |  | ||||||||    
T  33386302 acttaaccagcaagtttgaaaatcgtgtcacgattccacaaaatcgtgtcacgatttggcaccctgcaaacc-agctcacggcatcacaaaatcgtgtca 33386204  T
Q  152 cgattgccaaat-cgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 218  Q
    |||| ||||||| |||| ||||||| |||||||||  |  ||||||||||||||||||| | ||||||    
T  33386203 cgat-gccaaattcgtgtcacgatttctctgttctttcggaccacaaatttgaagccaaatctcaaca 33386137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 160 - 211
Target Start/End: Complemental strand, 40592302 - 40592251
Alignment:
Q  160 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaatt 211  Q
    ||||| || ||||||| ||| ||||| |||||||||||||||||||||||||    
T  40592302 aaatcatgtcacgatttctccgttcttccaaaccacaaatttgaagccaatt 40592251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 160 - 210
Target Start/End: Complemental strand, 8738599 - 8738549
Alignment:
Q  160 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
    ||||| || ||||||| ||||||||| ||| ||||||||||||||||||||    
T  8738599 aaatcatgtcacgatttctctgttcttccagaccacaaatttgaagccaat 8738549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 160 - 210
Target Start/End: Complemental strand, 9090837 - 9090787
Alignment:
Q  160 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
    ||||| || ||||||| ||||||||| ||| ||||||||||||||||||||    
T  9090837 aaatcatgtcacgatttctctgttcttccagaccacaaatttgaagccaat 9090787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 143 - 181
Target Start/End: Original strand, 9634818 - 9634856
Alignment:
Q  143 atcgtgtcacgattgccaaatcgtgacacgattcctctg 181  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  9634818 atcgtgtcacgattgccaaatcgtgtcacgatttctctg 9634856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 160 - 218
Target Start/End: Original strand, 32143870 - 32143928
Alignment:
Q  160 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 218  Q
    |||||||| ||||||| |||||||||  || ||||||||||||||||||| | ||||||    
T  32143870 aaatcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaaatctcaaca 32143928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 160 - 210
Target Start/End: Original strand, 35926057 - 35926106
Alignment:
Q  160 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
    |||||||| ||||||| ||||||||| ||||||| ||||||||||||||||    
T  35926057 aaatcgtgtcacgatttctctgttcttccaaacc-caaatttgaagccaat 35926106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 160 - 218
Target Start/End: Original strand, 40845221 - 40845279
Alignment:
Q  160 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 218  Q
    |||||||| ||||||| ||||||||||||||| || |||||||||| ||| | ||||||    
T  40845221 aaatcgtgtcacgatttctctgttctcccaaaacataaatttgaagacaaatctcaaca 40845279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 160 - 210
Target Start/End: Original strand, 48438782 - 48438832
Alignment:
Q  160 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
    |||||||| ||||||| |||||||||  |||||||||||||| ||||||||    
T  48438782 aaatcgtgtcacgatttctctgttcttacaaaccacaaatttaaagccaat 48438832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 143 - 218
Target Start/End: Original strand, 7782637 - 7782712
Alignment:
Q  143 atcgtgtcacgattgccaaa-tcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 218  Q
    |||||||||||| ||||||| ||||| ||||||| | ||||||| | | ||||||||||||||||||| | ||||||    
T  7782637 atcgtgtcacga-tgccaaattcgtgtcacgatttccctgttcttctagaccacaaatttgaagccaaatctcaaca 7782712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 160 - 204
Target Start/End: Complemental strand, 27986015 - 27985971
Alignment:
Q  160 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaa 204  Q
    |||||||| ||||||| ||||||| | ||||||||||||||||||    
T  27986015 aaatcgtgtcacgatttctctgttattccaaaccacaaatttgaa 27985971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 158; Significance: 8e-84; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 158; E-Value: 8e-84
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 176666 - 176457
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    |||||||||||||||||||||| ||| | | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  176666 atcgtgtcacgatctgcaacggacccaaagttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 176567  T
Q  101 gcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatt 200  Q
     ||||||||||||||||||||||||||||||||||||| | ||||||||||||| ||| |||||||||||||||||||||||||||||||||||| ||||    
T  176566 ccacgattttgcttccagcaaacttagctcactgcctccctgatcgtgtcacgactgcaaaatcgtgacacgattcctctgttctcccaaaccactaatt 176467  T
Q  201 tgaagccaat 210  Q
    ||||| ||||    
T  176466 tgaagtcaat 176457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 137; Significance: 3e-71; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 45347533 - 45347321
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    ||||||||||||||||||||||| |||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  45347533 atcgtgtcacgatctgcaacggttcccaggttgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 45347434  T
Q  101 gcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatt 200  Q
     ||||||||||| |||||||||||| |||||| || ||||  |||||||||||||| | |||||||| ||||||| || |||||| ||| ||||||||||    
T  45347433 ccacgattttgcatccagcaaacttggctcacggcatctctaatcgtgtcacgattccaaaatcgtgtcacgatttctttgttcttccagaccacaaatt 45347334  T
Q  201 tgaagccaatttt 213  Q
    |||||||||||||    
T  45347333 tgaagccaatttt 45347321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 5 - 212
Target Start/End: Original strand, 18856097 - 18856304
Alignment:
Q  5 tgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcac 104  Q
    ||||||||||||||||||| |||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| || |||    
T  18856097 tgtcacgatctgcaacggttcccaggttgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcttgccac 18856196  T
Q  105 gattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaa 204  Q
    |||||||| |||||||||||| |||||| ||  |||| |||||||||||||| | |||||||| ||||||| ||||||||| ||| ||||||||||||||    
T  18856197 gattttgcatccagcaaacttggctcacggcacctccaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaa 18856296  T
Q  205 gccaattt 212  Q
    ||||||||    
T  18856297 gccaattt 18856304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 45357014 - 45356861
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    ||||||||||||||||||||||| |||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  45357014 atcgtgtcacgatctgcaacggttcccaggttgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 45356915  T
Q  101 gcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacga 154  Q
     ||||||||||| |||||||||||| |||||| || ||||  ||||||||||||    
T  45356914 ccacgattttgcatccagcaaacttggctcacggcatctcaaatcgtgtcacga 45356861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 5733030 - 5733240
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  5733030 atcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 5733129  T
Q  101 gcacgattttgcttccagcaaacttagctcactgcctctc-cgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaat 199  Q
     |||||||| || ||| ||||||||   |||| ||  | |   |||||||||||||  | |||||||| || |||| |||||||||  || |||||||||    
T  5733130 tcacgatttggcgtcctgcaaacttgcttcacggcaccacgaaatcgtgtcacgatgccaaaatcgtgtcatgatttctctgttctttcagaccacaaat 5733229  T
Q  200 ttgaagccaat 210  Q
    |||||||||||    
T  5733230 ttgaagccaat 5733240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 9224115 - 9223906
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    |||||||||||||||||||||| ||| |||  ||| |||| ||||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  9224115 atcgtgtcacgatctgcaacggacccaaggtagacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 9224016  T
Q  101 gcacgattttgcttccagcaaacttagctcactgcctc-tccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaat 199  Q
     |||||||| || ||| |||||| |||||||| ||| | |   |||||||||||||  | |||||||| ||||||| ||||||||| ||| |||||||||    
T  9224015 ccacgatttggcgtcctgcaaac-tagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaat 9223917  T
Q  200 ttgaagccaat 210  Q
    |||||||||||    
T  9223916 ttgaagccaat 9223906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 9228902 - 9228693
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    |||||||||||||||||||||| ||| |||  ||| |||| ||||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  9228902 atcgtgtcacgatctgcaacggacccaaggtagacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 9228803  T
Q  101 gcacgattttgcttccagcaaacttagctcactgcctc-tccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaat 199  Q
     |||||||| || ||| ||||||  ||||||| ||| | |   |||||||||||||  | |||||||| ||||||| ||||||||| ||| |||||||||    
T  9228802 ccacgatttggcgtcctgcaaac-gagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaat 9228704  T
Q  200 ttgaagccaat 210  Q
    |||||||||||    
T  9228703 ttgaagccaat 9228693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 56141728 - 56141518
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    ||||||||||||| |||| | | ||| |||  |||||||| ||||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  56141728 atcgtgtcacgatttgcatctgacccaaggtagaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 56141629  T
Q  101 gcacgatttt-gcttccagcaaacttagctcactgcctctcc-gatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaa 198  Q
     ||||||||| || ||| |||||| ||||||||  || ||||  |||||||||||||  | |||||||| ||||||| ||||||||| ||| ||||||||    
T  56141628 ccacgattttggcgtcctgcaaac-tagctcacgacccctccaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaa 56141530  T
Q  199 tttgaagccaat 210  Q
    ||||||||||||    
T  56141529 tttgaagccaat 56141518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 5 - 210
Target Start/End: Original strand, 3814394 - 3814598
Alignment:
Q  5 tgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcac 104  Q
    ||||||||||||||||||| | |||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||  |||||| |||    
T  3814394 tgtcacgatctgcaacggttctcaggttgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttccca-aatcgtgacac 3814492  T
Q  105 gattttgcttccagcaaacttagctcactgcctc-tccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttga 203  Q
    ||||| || ||  |||||||| ||| || | | | |   |||||||||||||  | |||||||| ||||||| ||||||||| ||| |||||||||||||    
T  3814493 gatttggcgtcttgcaaactt-gcttacggtcacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttga 3814591  T
Q  204 agccaat 210  Q
    |||||||    
T  3814592 agccaat 3814598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 31 - 210
Target Start/End: Original strand, 24742391 - 24742570
Alignment:
Q  31 atgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctc 130  Q
    |||||||||| ||||||  |||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||| || ||| |||||| ||||||    
T  24742391 atgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctc 24742489  T
Q  131 actgcctctc-cgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
    || ||  |||   |||||||||||||  | |||||||| ||||||| ||||||||| ||| ||||||||||||||||||||    
T  24742490 acggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 24742570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 36 - 210
Target Start/End: Original strand, 51520869 - 51521043
Alignment:
Q  36 cagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctcactgc 135  Q
    ||||| ||||||| |||||||||| |||||||||||||||||||||| ||||||||| ||||||| |||||||| || ||| |||||| |||||||| ||    
T  51520869 cagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcatgatttcccaagatcgtgccacgatttggcgtcctgcaaac-tagctcacggc 51520967  T
Q  136 ctc-tccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
    | | |   |||||||||||||  | |||||||| ||||||| ||||||||| ||| ||||||||||||||||||||    
T  51520968 cccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 51521043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 4 - 124
Target Start/End: Complemental strand, 18712468 - 18712348
Alignment:
Q  4 gtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggca 103  Q
    |||||||||||| |||||| ||| ||| |||| |||| ||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||| ||    
T  18712468 gtgtcacgatcttcaacggacccaaggttgacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgcca 18712369  T
Q  104 cgattttgcttccagcaaact 124  Q
    |||||| || ||| |||||||    
T  18712368 cgatttggcgtcctgcaaact 18712348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 102 - 212
Target Start/End: Original strand, 18860406 - 18860516
Alignment:
Q  102 cacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaattt 201  Q
    ||||||||||| |||||||||||| |||||| ||  |||| |||||||||||||| | |||||||| ||||||| ||||||||| ||| |||||||||||    
T  18860406 cacgattttgcatccagcaaacttggctcacggcacctccaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaattt 18860505  T
Q  202 gaagccaattt 212  Q
    |||||||||||    
T  18860506 gaagccaattt 18860516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 31 - 124
Target Start/End: Original strand, 29761072 - 29761165
Alignment:
Q  31 atgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaact 124  Q
    |||||||||| ||||||  |||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||| || ||| |||||||    
T  29761072 atgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaact 29761165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 7122484 - 7122279
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggat-gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgt 99  Q
    ||||||||||||| |||  | ||||| ||||  |||||||| ||||||  |||||||||| |||||||||||| |||||||||||||||||||  |||||    
T  7122484 atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgt 7122385  T
Q  100 ggcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaat 199  Q
    | ||||||||     || |||| | |||||||| || ||    |||||||||||||  | |||||||| ||||||| | ||||||| ||| |||||||||    
T  7122384 gccacgatttgcacccctgcaaccctagctcacggcatccgaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccacaccacaaat 7122285  T
Q  200 ttgaag 205  Q
    ||||||    
T  7122284 ttgaag 7122279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 33 - 205
Target Start/End: Complemental strand, 7124673 - 7124501
Alignment:
Q  33 gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctcac 132  Q
    |||||||| ||||||  |||||||||| |||||||||||| |||||||||||||||||||  |||||| ||||||||     || |||| | ||||||||    
T  7124673 gaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgatttgcacccctgcaaccctagctcac 7124574  T
Q  133 tgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaag 205  Q
     || ||    |||||||||||||  | |||||||| ||||||| | ||||||| ||| |||||||||||||||    
T  7124573 ggcatccgaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccacaccacaaatttgaag 7124501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 154 - 218
Target Start/End: Original strand, 5143803 - 5143867
Alignment:
Q  154 attgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 218  Q
    ||||| |||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  5143803 attgcaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaattttcaaca 5143867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 33 - 218
Target Start/End: Complemental strand, 28468162 - 28467977
Alignment:
Q  33 gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctcac 132  Q
    |||||||| |||||| ||| ||||||| |||||||||   |||||||||||||||| ||| ||||||| |||||||| ||  || ||||||  |||||||    
T  28468162 gaccagtccttatcatagaaacttaacgagcaagtttgaaaatcgtgtcacgattttccaagatcgtgtcacgatttggcaccctgcaaac-cagctcac 28468064  T
Q  133 tgcctctc-cgatcgtgtcacgattgccaaa-tcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 218  Q
     || || |   ||||||| |||| ||||||| ||||| ||||||| ||||||||| ||| ||||||||||||||||||| | ||||||    
T  28468063 ggcatcacaaaatcgtgttacga-tgccaaattcgtgtcacgatttctctgttcttccataccacaaatttgaagccaaatctcaaca 28467977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 33 - 210
Target Start/End: Complemental strand, 8393166 - 8392989
Alignment:
Q  33 gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctcac 132  Q
    |||||||| ||||||  |||||||||| |||||||||||| ||||||||||||||| ||   |||||| ||||||||     || |||| | ||||||||    
T  8393166 gaccagtccttatcacggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgccacgatttgcacccctgcaaccctagctcac 8393067  T
Q  133 tgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
     || ||    |||||||||||||  | |||||||| ||||||| | ||||||| ||| ||||||||||||||| ||||    
T  8393066 ggcatccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 8392989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 8689094 - 8689038
Alignment:
Q  160 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaa 216  Q
    |||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  8689094 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaattttcaa 8689038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 160 - 219
Target Start/End: Original strand, 5148244 - 5148303
Alignment:
Q  160 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaacaa 219  Q
    |||||||| ||||||| |||| |||| |||||||||||||||||||||||||||||||||    
T  5148244 aaatcgtgtcacgatttctctattcttccaaaccacaaatttgaagccaattttcaacaa 5148303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 31 - 218
Target Start/End: Original strand, 13992692 - 13992879
Alignment:
Q  31 atgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctc 130  Q
    |||||||||| ||||||   | ||||||| |||||||||   ||||||||||||||||||||  |||||| |||||||| ||  || ||||||  |||||    
T  13992692 atgaccagtccttatcatgaaaacttaacgagcaagtttgaaaatcgtgtcacgatttcccaaaatcgtgtcacgatttggcaccctgcaaacc-agctc 13992790  T
Q  131 actgcctctccga-tcgtgtcacgattgccaaa-tcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 218  Q
    ||  | || |  | ||||||||||| ||||||| ||||| ||||||| ||||||||| ||| ||||||||||||||||||| | ||||||    
T  13992791 acgacatcacgaaatcgtgtcacga-tgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatctcaaca 13992879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 33 - 218
Target Start/End: Original strand, 31495717 - 31495902
Alignment:
Q  33 gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctcac 132  Q
    |||||||| ||||||  || ||||||| |||||||||   ||||||||||||||||||||  |||||| |||||||| ||  || ||||||  |||||||    
T  31495717 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcaaac-cagctcac 31495815  T
Q  133 tgcctctc-cgatcgtgtcacgattgccaaa-tcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 218  Q
     || || |   |||||||||||| ||||||| ||||| ||||||| | ||||||| ||| ||||||||||||||| ||| | ||||||    
T  31495816 ggcatcacgaaatcgtgtcacga-tgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 31495902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 38151968 - 38151909
Alignment:
Q  160 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaacaa 219  Q
    |||||||| ||||||| ||||||||| |||||||||||||||||||||||| | ||||||    
T  38151968 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatatacaacaa 38151909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 160 - 218
Target Start/End: Complemental strand, 6742946 - 6742888
Alignment:
Q  160 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 218  Q
    |||||||| ||||||| ||||||||| |||||||| ||||||||||||||||| |||||    
T  6742946 aaatcgtgtcacgatttctctgttcttccaaaccataaatttgaagccaatttacaaca 6742888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 160 - 210
Target Start/End: Complemental strand, 16628403 - 16628353
Alignment:
Q  160 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
    |||||||| ||||||| ||||||||| ||||||||||||||||||||||||    
T  16628403 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 16628353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 161 - 210
Target Start/End: Original strand, 3778116 - 3778165
Alignment:
Q  161 aatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
    ||||||| ||||||| ||||||||| ||||||||||||||||||||||||    
T  3778116 aatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 3778165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 33 - 210
Target Start/End: Complemental strand, 8395375 - 8395198
Alignment:
Q  33 gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctcac 132  Q
    |||||||| ||||||  |||||||||| |||||||||||| || |||||||||||| ||   ||||||  |||||||     || |||| | ||||||||    
T  8395375 gaccagtccttatcacggatacttaacgagcaagtttctggattgtgtcacgattttcccaaatcgtgctacgatttgcacccctgcaaccctagctcac 8395276  T
Q  133 tgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
     || ||    |||||||||||||  | |||||||| ||||||| | ||||||| ||| ||||||||||||||| ||||    
T  8395275 ggcatccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 8395198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 160 - 211
Target Start/End: Complemental strand, 5268749 - 5268698
Alignment:
Q  160 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaatt 211  Q
    ||||| || ||||||| ||||||||| |||||||||||||||||||||||||    
T  5268749 aaatcctgtcacgatttctctgttcttccaaaccacaaatttgaagccaatt 5268698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 160 - 218
Target Start/End: Complemental strand, 5396221 - 5396164
Alignment:
Q  160 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 218  Q
    |||||||| ||||||| |||||||||  ||||||||||||||||||| |||||||||||    
T  5396221 aaatcgtg-cacgatttctctgttctttcaaaccacaaatttgaagctaattttcaaca 5396164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 160 - 210
Target Start/End: Original strand, 10047932 - 10047982
Alignment:
Q  160 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
    |||||||| |||||||  |||||||| ||||||||||||||||||||||||    
T  10047932 aaatcgtgtcacgatttatctgttcttccaaaccacaaatttgaagccaat 10047982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 160 - 210
Target Start/End: Complemental strand, 16622824 - 16622774
Alignment:
Q  160 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
    |||||||| ||||||| ||||||||| ||||||||||||||| ||||||||    
T  16622824 aaatcgtgtcacgatttctctgttcttccaaaccacaaattttaagccaat 16622774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 36314761 - 36314701
Alignment:
Q  160 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaacaaa 220  Q
    |||||||| ||||||| |||| |||| | |||||||||||||||||| ||||| |||||||    
T  36314761 aaatcgtgtcacgatttctctattcttcgaaaccacaaatttgaagctaatttacaacaaa 36314701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 36328970 - 36328910
Alignment:
Q  160 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaacaaa 220  Q
    |||||||| ||||||| |||| |||| | |||||||||||||||||| ||||| |||||||    
T  36328970 aaatcgtgtcacgatttctctattcttcgaaaccacaaatttgaagctaatttacaacaaa 36328910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 5135867 - 5135656
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggat-gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacga-tttcccaggatcg 98  Q
    ||||||||||||| |||  | ||||| ||||  |||| ||| ||||||  |||||||||| |||||||||||  |||||||||||| |||||||  ||||    
T  5135867 atcgtgtcacgatttgcgtccgtcccaaggaacgaccggtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcg 5135768  T
Q  99 tggcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaa 198  Q
    || ||||||||     || |||| | || ||||| || ||    |||| ||||||||  | |||||||| ||||||| | ||||||| |||| |||||||    
T  5135767 tgacacgatttgcacccctgcaaccctaactcacggcatccgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaagccacaaa 5135668  T
Q  199 tttgaagccaat 210  Q
    ||||||| ||||    
T  5135667 tttgaagacaat 5135656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 5138093 - 5137882
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggat-gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacga-tttcccaggatcg 98  Q
    ||||||||||||| |||  | ||||| ||||  |||| ||| ||||||  |||||||||| |||||||||||  |||||||||||| |||||||  ||||    
T  5138093 atcgtgtcacgatttgcgtccgtcccaaggaacgaccggtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcg 5137994  T
Q  99 tggcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaa 198  Q
    || ||||||||     || |||| | || ||||| || ||    |||| ||||||||  | |||||||| ||||||| | ||||||| |||| |||||||    
T  5137993 tgacacgatttgcacccctgcaaccctaactcacggcatccgaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaagccacaaa 5137894  T
Q  199 tttgaagccaat 210  Q
    ||||||| ||||    
T  5137893 tttgaagacaat 5137882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 31985202 - 31985124
Alignment:
Q  143 atcgtgtcacgattgccaaat-cgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaacaaag 221  Q
    ||||||||||||| ||||||| |||| ||||||| |||||||||  || | ||||||||||||||||| | |||||||||    
T  31985202 atcgtgtcacgat-gccaaattcgtgtcacgatttctctgttctttcagatcacaaatttgaagccaaatctcaacaaag 31985124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 160 - 211
Target Start/End: Original strand, 54867745 - 54867796
Alignment:
Q  160 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaatt 211  Q
    |||||||| ||||| | |||| |||| |||||||||||||||||||||||||    
T  54867745 aaatcgtgtcacgacttctctattcttccaaaccacaaatttgaagccaatt 54867796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 160 - 206
Target Start/End: Original strand, 29761182 - 29761228
Alignment:
Q  160 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagc 206  Q
    |||||||| ||||||| ||||||||| ||| ||||||||||||||||    
T  29761182 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagc 29761228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 133; Significance: 7e-69; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 729 - 948
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    ||||||||||||||||||||||  || | | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  729 atcgtgtcacgatctgcaacggaaccaaagttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 828  T
Q  101 gcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatt 200  Q
     ||||||||||| |||||||||||| |||||| ||  |||| |||||||||||||| | |||||||| ||||||| ||||||||| ||| ||||||||||    
T  829 ccacgattttgcatccagcaaacttggctcacggcacctccaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccataccacaaatt 928  T
Q  201 tgaagccaattttcaacaaag 221  Q
    ||||||||| |||||||||||    
T  929 tgaagccaa-tttcaacaaag 948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 95; Significance: 3e-46; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 3553 - 3344
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    |||||||||||||||||||||||||||||| |||| |||| ||||||  |||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  3553 atcgtgtcacgatctgcaacggtccccaggttgactagtccttatcattgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 3454  T
Q  101 gcacgattttgcttccagcaaacttagctcactgcctc-tccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaat 199  Q
     |||||||| || |||  ||||| |||||||| ||| | |   |||||||||||||  | |||||||| ||||||| |||| |||| ||| |||||||||    
T  3453 ccacgatttggcgtccttcaaac-tagctcacggccacttgaaatcgtgtcacgatgtcaaaatcgtgtcacgatttctcttttcttccagaccacaaat 3355  T
Q  200 ttgaagccaat 210  Q
    |||||||||||    
T  3354 ttgaagccaat 3344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 75; Significance: 3e-34; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 34770 - 34561
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtg 100  Q
    |||||||||||||||||||||| ||| |||  ||| |||| ||||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  34770 atcgtgtcacgatctgcaacggacccaaggtagacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 34671  T
Q  101 gcacgattttgcttccagcaaacttagctcactgcctc-tccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaat 199  Q
     |||||||| || ||  ||||||  | || || ||| | |   || ||||||||||  | |||||||| ||||||| ||||||||| ||| |||||||||    
T  34670 ccacgatttggcgtcatgcaaac-aaactaacggccacttgaaatagtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaat 34572  T
Q  200 ttgaagccaat 210  Q
    |||||||||||    
T  34571 ttgaagccaat 34561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 33 - 210
Target Start/End: Original strand, 4126 - 4303
Alignment:
Q  33 gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctcac 132  Q
    |||||||| ||||||  |||||||||| |||||||||||| |||||||||||||||||||  |||||| ||||||||     || |||| | ||||||||    
T  4126 gaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgatttgcacccctgcaaccctagctcac 4225  T
Q  133 tgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
     ||  ||   |||||||||||||| | |||||||| ||||||| | ||||||| ||| ||||||||||||||| ||||    
T  4226 ggcacctaaaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaat 4303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 8091 - 8199
Alignment:
Q  16 gcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttc 115  Q
    ||||||| ||| ||| |||| |||| ||||||| |||||||||| |||||||||||||||||||||||||||| ||| ||||||| |||||||| || ||    
T  8091 gcaacggacccaaggttgacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgatttggcgtc 8190  T
Q  116 cagcaaact 124  Q
    | |||||||    
T  8191 ctgcaaact 8199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 160 - 210
Target Start/End: Original strand, 8216 - 8266
Alignment:
Q  160 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 210  Q
    |||||||| ||||||| ||||||||| ||| ||||||||||||||||||||    
T  8216 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 8266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 33 - 218
Target Start/End: Complemental strand, 22124 - 21939
Alignment:
Q  33 gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctcac 132  Q
    |||| ||| ||||||| |||||||||| |||||||||   |||||||||||||||||||| ||||||| |||||||| || ||| |||||| ||||||||    
T  22124 gacctgtccttatcagtgatacttaacgagcaagttttacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaaac-tagctcac 22026  T
Q  133 tgcctctc-cgatcgtgtcacgattgccaaa-tcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 218  Q
     ||  |||   |||||||||||| ||||||| || || | ||||| ||||||||| ||| |||||||||||||| |||| | ||||||    
T  22025 ggcacctcgaaatcgtgtcacga-tgccaaattcatgtcccgatttctctgttcttccagaccacaaatttgaaaccaaatctcaaca 21939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 6077 - 5866
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggat-gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttc-ccaggatcg 98  Q
    ||||||||||||| |||  | ||||| ||||  |||||||| ||||||  |||||||||| ||||||||||   |||||||||||||||  |||  ||||    
T  6077 atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttgccacaatcg 5978  T
Q  99 tggcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaa 198  Q
    || ||||| |||||  || |||| | |||||||| ||  |||| |||||||||||| | | |||||||| ||||||| | ||||||| ||| ||||||||    
T  5977 tgacacgaatttgcaccctgcaaccctagctcacggcacctccaatcgtgtcacgactccaaaatcgtggcacgatttccctgttcttccagaccacaaa 5878  T
Q  199 tttgaagccaat 210  Q
    ||||||| ||||    
T  5877 tttgaagacaat 5866  T

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Target: scaffold0565 (Bit Score: 51; Significance: 6e-20; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 2968 - 3178
Alignment:
Q  1 atcgtgtcacgatctgcaacggtccccaggat-gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgt 99  Q
    ||||||||||||| |||  | ||||| ||||  |||||||| ||||||   ||||||||| |||||||||||| |||||||||||||||||||  |||||    
T  2968 atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaagaatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgt 3067  T
Q  100 ggcacgattttgcttccagcaaacttagctcactgcctctccgatcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaat 199  Q
    | ||||||||     || |||| | |||||||| || ||    |||||||||||||  | |||||||| ||||||| | ||||||| ||| |||||||||    
T  3068 gccacgatttgcacccctgcaaccctagctcacggcatccgaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaat 3167  T
Q  200 ttgaagccaat 210  Q
    |||||| ||||    
T  3168 ttgaagacaat 3178  T

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Target: scaffold0188 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 33 - 219
Target Start/End: Complemental strand, 17616 - 17430
Alignment:
Q  33 gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctcac 132  Q
    ||||| || ||||||  |||||||||| |||||||||   |||| ||||||||||||||| ||||||| |||||||| ||  || ||||||  |||||||    
T  17616 gaccaatccttatcaaggatacttaacgagcaagtttgaaaatcatgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacc-agctcac 17518  T
Q  133 tgcctctccga-tcgtgtcacgattgccaaat-cgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaacaa 219  Q
     || || |  | |||||||||||| ||||||| |||| ||||||| ||||||||| ||| ||||||||||||||||||| | |||||||    
T  17517 ggcatcacgaaatcgtgtcacgat-gccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatctcaacaa 17430  T

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Target: scaffold1455 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold1455
Description:

Target: scaffold1455; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 143 - 212
Target Start/End: Complemental strand, 1783 - 1714
Alignment:
Q  143 atcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattt 212  Q
    |||||||||||||| | |||||||| ||||||| ||||||||| ||| ||||||||||||||||||||||    
T  1783 atcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaattt 1714  T

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Target: scaffold0491 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 33 - 219
Target Start/End: Original strand, 11569 - 11754
Alignment:
Q  33 gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctcac 132  Q
    |||||||| ||||||  || ||||||| |||||||||   ||||||||||||||||||||  |||||| |||||||| ||  || ||||||  |||||||    
T  11569 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccaa-atcgtgtcacgatttggcaccctgcaaacc-agctcac 11666  T
Q  133 tgcctc-tccgatcgtgtcacgattgccaaa-tcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaacaa 219  Q
     || || |   |||||||||||| ||||||| ||||| ||||||| ||||||||| ||| ||||||| ||||||||||| | |||||||    
T  11667 ggcatcatgaaatcgtgtcacga-tgccaaattcgtgtcacgatttctctgttcttccagaccacaattttgaagccaaatctcaacaa 11754  T

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Target: scaffold0491; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 33 - 218
Target Start/End: Original strand, 9124 - 9308
Alignment:
Q  33 gaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattttgcttccagcaaacttagctcac 132  Q
    |||||||| ||||||  || ||||||| |||||||||   ||||||||||||||||||||  ||| || |||||||| ||  || ||||||  |||||||    
T  9124 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccaa-atcatgtcacgatttggcaccctgcaaacc-agctcac 9221  T
Q  133 tgcctctccga-tcgtgtcacgattgccaaa-tcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 218  Q
     || || |  | ||||||||||| ||||||| ||||| ||||||| ||||||||| ||| ||||||||||||||||||| | ||||||    
T  9222 ggcatcacgaaatcgtgtcacga-tgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatctcaaca 9308  T

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Target: scaffold0087 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 36370 - 36323
Alignment:
Q  172 gattcctctgttctcccaaaccacaaatttgaagccaattttcaacaa 219  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||    
T  36370 gatttctctgttcttccaaaccacaaatttgaagccaattttcaacaa 36323  T

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Target: scaffold0087; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 143 - 220
Target Start/End: Complemental strand, 43509 - 43432
Alignment:
Q  143 atcgtgtcacgattgcca-aatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaacaaa 220  Q
    ||||||||||||| |||| ||||||| ||||||| |||| |||| |||||||| |||||||||||||| || |||||||    
T  43509 atcgtgtcacgat-gccacaatcgtgtcacgatttctctattcttccaaaccataaatttgaagccaaattccaacaaa 43432  T

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Target: scaffold0006 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 160 - 211
Target Start/End: Original strand, 6252 - 6303
Alignment:
Q  160 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaatt 211  Q
    |||||||| ||||||| ||||||||| |||||||||||||||||||||||||    
T  6252 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatt 6303  T

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Target: scaffold0006; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 160 - 211
Target Start/End: Original strand, 3060 - 3111
Alignment:
Q  160 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaatt 211  Q
    |||||||| || |||| ||||||||| |||||||||||||||||||||||||    
T  3060 aaatcgtgtcatgatttctctgttcttccaaaccacaaatttgaagccaatt 3111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 132809 - 132752
Alignment:
Q  161 aatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 218  Q
    ||||||| ||||||| ||||||||| ||||||||||||||||||| ||| | ||||||    
T  132809 aatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagacaaatctcaaca 132752  T

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Target: scaffold0098 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 45746 - 45806
Alignment:
Q  160 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaacaaa 220  Q
    |||| ||| ||||||| ||||||||| ||||||||||||||||||||||| | ||||||||    
T  45746 aaattgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaacaaa 45806  T

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Target: scaffold0098; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 53 - 109
Target Start/End: Original strand, 45658 - 45714
Alignment:
Q  53 acttaaccagcaagtttctgaatcgtgtcacgatttcccaggatcgtggcacgattt 109  Q
    ||||| |||||||||||   ||||||||||||||||| ||| |||||| ||||||||    
T  45658 acttagccagcaagtttgaaaatcgtgtcacgatttcacagaatcgtgccacgattt 45714  T

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Target: scaffold0510 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 143 - 218
Target Start/End: Complemental strand, 1158 - 1083
Alignment:
Q  143 atcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 218  Q
    |||||||||||||  | |||||||| |||||||  ||||||||  |||||||||||||||||| ||| ||||||||    
T  1158 atcgtgtcacgatgccaaaatcgtgtcacgatttttctgttctttcaaaccacaaatttgaaggcaaatttcaaca 1083  T

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Target: scaffold0140 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 143 - 218
Target Start/End: Complemental strand, 7986 - 7911
Alignment:
Q  143 atcgtgtcacgattgccaaat-cgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 218  Q
    ||||||||||||| ||||||| |||| ||||||| |||||||||  || ||||||||||||||||||| | ||||||    
T  7986 atcgtgtcacgat-gccaaattcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaaatctcaaca 7911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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