View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19118_high_2 (Length: 469)
Name: NF19118_high_2
Description: NF19118
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19118_high_2 |
 |  |
|
Alignment Details
Target: chr2 (Bit Score: 369; Significance: 0; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 369; E-Value: 0
Query Start/End: Original strand, 1 - 458
Target Start/End: Complemental strand, 3751419 - 3750957
Alignment:
| Q |
1 |
ttgttttagtattggtatctttttctgttgcgaaacaacccttgtaagttgttactttattggttttgatccataacgtcaacttctgttnnnnnnntga |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
3751419 |
ttgttttagtattggtatctttttctgttgcgaaacaacccttgtaagttgttaccttattggttttgatccataacgtcaacttctgttaaaaaaatga |
3751320 |
T |
 |
| Q |
101 |
tgtgctggcaaacagaggctgatgtggcgaaggctgagatgacgttagtggcttatgtggattgacagaatgataagttagtagtttgagagaccaaacc |
200 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||| |
|
|
| T |
3751319 |
tgtgctggcaaacagaggctgacgtggcgaaggctgagatgacgttagtggcttatgtggactaacagaatgatcagttagtagtttgagagaccaaacc |
3751220 |
T |
 |
| Q |
201 |
aaaaatgcaaatgtacatagagacgaaattgaaaaaccgcaaatatcaaaatttcaaattcaaaaacaagatcttcttcttcatccctcttttttctc-- |
298 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3751219 |
aaaaatgcaaatgtacatagagacgaaattgaaaaaccgcaaatatcaaaatttcaaattcaaaaacaagatcttcttcttcatccctcttttttctctt |
3751120 |
T |
 |
| Q |
299 |
---ttattcatctcccttcccttccaannnnnnngattctaggatgacgaaggcagcgaaggtaatatcattttcagcctttggttctaactctaatttt |
395 |
Q |
| |
|
|| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3751119 |
gcattgttcatctcccttcccttccaatttctttgattctaggatgacgaaggcagcgaaggtaatatcattttcagcctttggttctaactctaatttt |
3751020 |
T |
 |
| Q |
396 |
gaacttgttgtcactttagaaacaaaaagttcatagaattctcgggttccatttcatatttca |
458 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |
|
|
| T |
3751019 |
gaacttgttgtcactttagaaacaaaaagttcatagaattctcgagttacatttcatatttca |
3750957 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 196 - 313
Target Start/End: Complemental strand, 9662065 - 9661951
Alignment:
| Q |
196 |
aaaccaaaaatgcaaatgtacatagagacgaaattgaaaaaccgcaaatatcaaaatttcaaattcaaaaacaagatcttcttcttcatccctctttttt |
295 |
Q |
| |
|
||||||||||||||||| | ||||| ||||||| ||||||| | ||| |||||||||| ||||| |||||| | | |||||||||||||||| |||| |
|
|
| T |
9662065 |
aaaccaaaaatgcaaatttgcatagggacgaaaatgaaaaaacttaaacatcaaaatttgaaatttaaaaactata---tcttcttcatccctctgtttt |
9661969 |
T |
 |
| Q |
296 |
ctcttattcatctccctt |
313 |
Q |
| |
|
||||| |||||||||||| |
|
|
| T |
9661968 |
ctcttgttcatctccctt |
9661951 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 196 - 276
Target Start/End: Complemental strand, 18224687 - 18224607
Alignment:
| Q |
196 |
aaaccaaaaatgcaaatgtacatagagacgaaattgaaaaaccgcaaatatcaaaatttcaaattcaaaaacaagatcttc |
276 |
Q |
| |
|
|||||||||| ||||||| ||||| |||||||||||||| || |||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
18224687 |
aaaccaaaaactcaaatgtttatagaaacgaaattgaaaaaacgtaaatatcaaaattttaaatttaaaaacaagatcttc |
18224607 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 196 - 312
Target Start/End: Original strand, 6842910 - 6843023
Alignment:
| Q |
196 |
aaaccaaaaatgcaaatgtacatagagacgaaattgaaaaaccgcaaatatcaaaatttcaaattcaaaaacaagatcttcttcttcatccctctttttt |
295 |
Q |
| |
|
||||||||||| ||||| | ||||| ||||||| ||||||| | ||| |||||||||| ||||| |||||| | | |||||||||||||||| |||| |
|
|
| T |
6842910 |
aaaccaaaaatccaaatttgcatagggacgaaaatgaaaaaacttaaacatcaaaatttgaaatttaaaaactata---tcttcttcatccctctgtttt |
6843006 |
T |
 |
| Q |
296 |
ctcttattcatctccct |
312 |
Q |
| |
|
||||| ||||||||||| |
|
|
| T |
6843007 |
ctcttgttcatctccct |
6843023 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 308
Target Start/End: Original strand, 9661042 - 9661151
Alignment:
| Q |
196 |
aaaccaaaaatgcaaatgtacatagagacgaaattgaaaaaccgcaaatatcaaaatttcaaattcaaaaacaagatcttcttcttcatccctctttttt |
295 |
Q |
| |
|
||||||||| |||||| | ||||| ||||||| ||||||| || || |||||||||| ||||| |||||| | ||| ||| ||||||||||| |||| |
|
|
| T |
9661042 |
aaaccaaaatcgcaaatttgcatagggacgaaaatgaaaaaacgtaatcatcaaaatttaaaatttaaaaactatatc--ctt-ttcatccctctgtttt |
9661138 |
T |
 |
| Q |
296 |
ctcttattcatct |
308 |
Q |
| |
|
||||| ||||||| |
|
|
| T |
9661139 |
ctcttgttcatct |
9661151 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 96; Significance: 7e-47; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 43 - 282
Target Start/End: Complemental strand, 31017721 - 31017481
Alignment:
| Q |
43 |
tgtaagttgttactttattggttttgatccataacgtcaacttctgttnnnnnnntgatgtgctggcaaacagaggctgatgtggcgaaggctgagatga |
142 |
Q |
| |
|
|||||||||||| ||| ||| ||||| ||| ||||||||||||||||| ||||||||||||||| |||| |||||| | |||| ||||||| |
|
|
| T |
31017721 |
tgtaagttgttaattttttgattttggtccctaacgtcaacttctgttaaaaaaacgatgtgctggcaaacgaaggccgatgtgacaaaggttgagatgt |
31017622 |
T |
 |
| Q |
143 |
cgttagtggcttatgtggattgacagaatgataagttagtagtttgagagaccaaac-caaaaatgcaaatgtacatagagacgaaattgaaaaaccgca |
241 |
Q |
| |
|
|||| |||||||| ||||| ||| |||||||||||| |||||||||| ||||||| |||||| |||||||| |||| ||||||||||||||| | | |
|
|
| T |
31017621 |
cgtttgtggcttacgtggactgatagaatgataagtgggtagtttgagggaccaaaatcaaaaacgcaaatgttcataaggacgaaattgaaaaaaccta |
31017522 |
T |
 |
| Q |
242 |
aatatcaaaatttcaaattcaaaaacaagatcttcttcttc |
282 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
31017521 |
aatatcaaaatttcaaatttaaaaacaagatcttcttcttc |
31017481 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 124 - 279
Target Start/End: Complemental strand, 32615540 - 32615381
Alignment:
| Q |
124 |
gtggcgaaggctgagatgacgttagtggcttatgtggattgacaga--atgataagttagta-gtttgagagacc-aaaccaaaaatgcaaatgtacata |
219 |
Q |
| |
|
||||||||||||||| || ||||||||||||| |||| ||||||| ||||||||| | || ||| || |||| |||||||||| |||||| | |||| |
|
|
| T |
32615540 |
gtggcgaaggctgagttggcgttagtggcttacgtggcctgacagatgatgataagtgactactttttagggaccaaaaccaaaaacgcaaatttgcata |
32615441 |
T |
 |
| Q |
220 |
gagacgaaattgaaaaaccgcaaatatcaaaatttcaaattcaaaaacaagatcttcttc |
279 |
Q |
| |
|
| ||||||||||||||| || ||| | |||| ||| ||||| ||||| | ||||||||| |
|
|
| T |
32615440 |
gggacgaaattgaaaaaacgtaaacaccaaattttgaaatttaaaaattaaatcttcttc |
32615381 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 286 - 322
Target Start/End: Complemental strand, 31017286 - 31017250
Alignment:
| Q |
286 |
cctcttttttctcttattcatctcccttcccttccaa |
322 |
Q |
| |
|
||||||||||||||| ||||||| ||||||||||||| |
|
|
| T |
31017286 |
cctcttttttctcttgttcatcttccttcccttccaa |
31017250 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 94; Significance: 1e-45; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 33 - 282
Target Start/End: Original strand, 38157093 - 38157343
Alignment:
| Q |
33 |
aaacaacccttgtaagttgttactttattggttttgatccataacgtcaacttctgttnnnnnnntgatgtgctggcaaacagaggctgatgtggcgaag |
132 |
Q |
| |
|
|||||| ||||||||||||||| ||| ||||||||| || |||| |||||||||||| |||||||||||||||| ||||| || ||||| ||| |
|
|
| T |
38157093 |
aaacaaaccttgtaagttgttaattttttggttttggtctctaacatcaacttctgttaaaaaaatgatgtgctggcaaacggaggccgacgtggcaaag |
38157192 |
T |
 |
| Q |
133 |
gctgagatgacgttagtggcttatgtggattgacagaatgataagttagtagtttgagagaccaaa-ccaaaaatgcaaatgtacatagagacgaaattg |
231 |
Q |
| |
|
||||| ||| |||| |||||||| ||||| ||||||||||||| | |||| |||||| || ||| ||||||| |||||||| ||||| |||||||||| |
|
|
| T |
38157193 |
gctgatatggcgtttgtggcttacgtggaaagacagaatgataaatgagtaatttgagggattaaaaccaaaaacgcaaatgttcatagggacgaaattg |
38157292 |
T |
 |
| Q |
232 |
aaaaaccgcaaatatcaaaatttcaaattcaaaaacaagatcttcttcttc |
282 |
Q |
| |
|
|||| || |||||||||||||||||||| |||| |||||| ||||||||| |
|
|
| T |
38157293 |
aaaatacgtaaatatcaaaatttcaaatttaaaatcaagatattcttcttc |
38157343 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 40 - 282
Target Start/End: Original strand, 55017821 - 55018058
Alignment:
| Q |
40 |
ccttgtaagttgttactttattggttttgatccataacgtcaacttctgttnnnnnnntgatgtgctggcaaacagaggctgatgtggcgaaggctgaga |
139 |
Q |
| |
|
||||||||||||||| ||||||||||||| ||| ||||||| |||| |||||||||||||||| || || || ||||| |||||||| | |
|
|
| T |
55017821 |
ccttgtaagttgttaatttattggttttggtccctaacgtc------tgttaaaaaaatgatgtgctggcaaacggacgccgacgtggcaaaggctgata |
55017914 |
T |
 |
| Q |
140 |
tgacgttagtggcttatgtggattgacagaatgataagttagtagtttgagagaccaaa-ccaaaaatgcaaatgtacatagagacgaaattgaaaaacc |
238 |
Q |
| |
|
|| ||| |||||||| ||||| ||||||||||||| | |||| |||||| || ||| ||||||| ||| |||| ||||| |||||||||||||| | |
|
|
| T |
55017915 |
tggtgtttgtggcttacgtggaaagacagaatgataaatgagtaatttgagggattaaaaccaaaaacgcacatgttcatagggacgaaattgaaaatac |
55018014 |
T |
 |
| Q |
239 |
gcaaatatcaaaatttcaaattcaaaaacaagatcttcttcttc |
282 |
Q |
| |
|
| |||||||||||||||||||| |||| |||||| ||||||||| |
|
|
| T |
55018015 |
gtaaatatcaaaatttcaaatttaaaatcaagatattcttcttc |
55018058 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 80; Significance: 2e-37; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 196 - 322
Target Start/End: Original strand, 28556462 - 28556591
Alignment:
| Q |
196 |
aaaccaaaaatgcaaatgtacatagagacgaaattgaaaaaccgcaaatatcaaaatttcaaattcaaaaacaaga---tcttcttcttcatccctcttt |
292 |
Q |
| |
|
|||||||||| |||||||| || || ||||||||||||||| | |||||||||||||||||||| |||||||||| ||||||||||||||||||||| |
|
|
| T |
28556462 |
aaaccaaaaacgcaaatgttcagagggacgaaattgaaaaaatgtaaatatcaaaatttcaaatttaaaaacaagatcttcttcttcttcatccctcttt |
28556561 |
T |
 |
| Q |
293 |
tttctcttattcatctcccttcccttccaa |
322 |
Q |
| |
|
|||||||| ||||||||||||||||||||| |
|
|
| T |
28556562 |
tttctcttgttcatctcccttcccttccaa |
28556591 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 196 - 322
Target Start/End: Original strand, 706960 - 707089
Alignment:
| Q |
196 |
aaaccaaaaatgcaaatgtacatagagacgaaattgaaaaaccgcaaatatcaaaatttcaaattcaaaaacaaga---tcttcttcttcatccctcttt |
292 |
Q |
| |
|
|||||||||| |||||||| || || ||||||||||||||| | |||||||||||||| ||||| |||||||||| ||||||||||||||||||||| |
|
|
| T |
706960 |
aaaccaaaaacgcaaatgttcagagggacgaaattgaaaaaatgtaaatatcaaaattttaaatttaaaaacaagatcttcttcttcttcatccctcttt |
707059 |
T |
 |
| Q |
293 |
tttctcttattcatctcccttcccttccaa |
322 |
Q |
| |
|
|||||||| ||||||||||||||||||||| |
|
|
| T |
707060 |
tttctcttgttcatctcccttcccttccaa |
707089 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 208 - 322
Target Start/End: Original strand, 33823991 - 33824108
Alignment:
| Q |
208 |
caaatgtacatagagacgaaattgaaaaaccgcaaatatcaaaatttcaaattcaaaaacaaga---tcttcttcttcatccctcttttttctcttattc |
304 |
Q |
| |
|
||||||| || || ||||||||||||||| || |||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||| ||| |
|
|
| T |
33823991 |
caaatgttcagagggacgaaattgaaaaaacgtaaatatcaaaatttcaaatttaaaaacaagaccttcttcttcttcatccctcctttttctcttgttc |
33824090 |
T |
 |
| Q |
305 |
atctcccttcccttccaa |
322 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
33824091 |
atctcccttcccttccaa |
33824108 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 196 - 322
Target Start/End: Complemental strand, 707994 - 707858
Alignment:
| Q |
196 |
aaaccaaaaatgcaaatgtacatagagacgaaattgaaaaac---cgcaaatatcaaaatttcaaattcaaaaacaaga------tcttcttcttcatcc |
286 |
Q |
| |
|
|||||||||| |||||||| ||||| || |||||||||||| || |||| ||||||||||||||| |||||||| | ||||||||||||||| |
|
|
| T |
707994 |
aaaccaaaaacgcaaatgttcatagggatgaaattgaaaaaaaaacgtaaatgtcaaaatttcaaatttaaaaacaataaattattcttcttcttcatcc |
707895 |
T |
 |
| Q |
287 |
ctctttttt-ctcttattcatctcccttcccttccaa |
322 |
Q |
| |
|
|| |||||| ||||| |||||||||||||||| |||| |
|
|
| T |
707894 |
ctatttttttctcttcttcatctcccttccctgccaa |
707858 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 76; Significance: 6e-35; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 196 - 322
Target Start/End: Original strand, 17706382 - 17706511
Alignment:
| Q |
196 |
aaaccaaaaatgcaaatgtacatagagacgaaattgaaaaaccgcaaatatcaaaatttcaaattcaaaaacaaga---tcttcttcttcatccctcttt |
292 |
Q |
| |
|
|||||||||| |||||||| || || ||||||||||||||| | |||||||||||||| ||||| |||||||||| ||||||||||||||||||||| |
|
|
| T |
17706382 |
aaaccaaaaacgcaaatgttcagagggacgaaattgaaaaaatgtaaatatcaaaattttaaatttaaaaacaagatcttcttcttcttcatccctcttt |
17706481 |
T |
 |
| Q |
293 |
tttctcttattcatctcccttcccttccaa |
322 |
Q |
| |
|
|||||||| ||||||||||||||||||||| |
|
|
| T |
17706482 |
tttctcttgttcatctcccttcccttccaa |
17706511 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 196 - 322
Target Start/End: Complemental strand, 36901019 - 36900890
Alignment:
| Q |
196 |
aaaccaaaaatgcaaatgtacatagagacgaaattgaaaaaccgcaaatatcaaaatttcaaattcaaaaacaagatcttcttctt---catccctcttt |
292 |
Q |
| |
|
|||||||||| |||||||| ||||| ||||||||||||||| | |||||||||||||||||||| ||||||||||| ||||||| ||||||||||| |
|
|
| T |
36901019 |
aaaccaaaaacgcaaatgttcatagggacgaaattgaaaaaatgtaaatatcaaaatttcaaatttaaaaacaagatgatcttcttcatcatccctcttt |
36900920 |
T |
 |
| Q |
293 |
tttctcttattcatctcccttcccttccaa |
322 |
Q |
| |
|
|||||||| ||||||||||||||||||||| |
|
|
| T |
36900919 |
tttctcttgttcatctcccttcccttccaa |
36900890 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 200 - 322
Target Start/End: Complemental strand, 17707286 - 17707157
Alignment:
| Q |
200 |
caaaaatgcaaatgtacatagagacgaaattgaaaaac-cgcaaatatcaaaatttcaaattcaaaaacaagat------cttcttcttcatccctcttt |
292 |
Q |
| |
|
|||||| |||||||| ||||| || |||||||||||| || |||| ||||||||||||||| |||||||| || |||||||||||||||| ||| |
|
|
| T |
17707286 |
caaaaacgcaaatgttcatagggatgaaattgaaaaaaacgtaaatgtcaaaatttcaaatttaaaaacaatatattcttcttcttcttcatccctattt |
17707187 |
T |
 |
| Q |
293 |
tttctcttattcatctcccttcccttccaa |
322 |
Q |
| |
|
|||||||| |||||||||||||||| |||| |
|
|
| T |
17707186 |
tttctcttcttcatctcccttccctgccaa |
17707157 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 196 - 282
Target Start/End: Original strand, 36900116 - 36900203
Alignment:
| Q |
196 |
aaaccaaaaatgcaaatgtacatagagacgaaattgaaaaac-cgcaaatatcaaaatttcaaattcaaaaacaagatcttcttcttc |
282 |
Q |
| |
|
|||||||||| |||||||| ||||| || |||||||||||| || |||| ||||||||||||||| |||||||| || ||||||||| |
|
|
| T |
36900116 |
aaaccaaaaacgcaaatgttcatagggatgaaattgaaaaaaacgtaaatgtcaaaatttcaaatttaaaaacaatatattcttcttc |
36900203 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 157 - 322
Target Start/End: Complemental strand, 7384757 - 7384588
Alignment:
| Q |
157 |
gtggattgacagaatgataagttagtagtttgagagaccaaa-ccaaaaatgcaaatgtacatagagacgaaattgaaa-aaccgcaaatatcaaaattt |
254 |
Q |
| |
|
||||| || |||||| |||||| ||||||||||| ||||||| ||||||| ||||||| |||| |||||||||||||| || | |||||||||||||| |
|
|
| T |
7384757 |
gtggactggcagaataataagtgagtagtttgagggaccaaaaccaaaaacacaaatgttcataaagacgaaattgaaagaaacttaaatatcaaaattt |
7384658 |
T |
 |
| Q |
255 |
caaattcaaaaacaagatcttcttcttcatccctcttttttctcttattc--atctcccttcccttccaa |
322 |
Q |
| |
|
|||||| ||||||||||||||||| ||||| ||||||||||||||| ||| ||||||||||||| |||| |
|
|
| T |
7384657 |
caaatttaaaaacaagatcttctttttcattcctcttttttctcttgttcatatctcccttccctgccaa |
7384588 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 185 - 310
Target Start/End: Original strand, 46604663 - 46604786
Alignment:
| Q |
185 |
tttgagagaccaaa-ccaaaaatgcaaatgtacatagagacgaaattgaaaaaccgcaaatatcaaaatttcaaattcaaaaacaagatcttcttcttca |
283 |
Q |
| |
|
|||||||||||||| ||||||| | ||| || || || || |||||||||||| | ||| |||||||||| ||||| ||||| ||| ||||||||| |
|
|
| T |
46604663 |
tttgagagaccaaaaccaaaaacgtaaaagtgcaaagggatgaaattgaaaaaacataaaaatcaaaatttaaaatttaaaaagtaga---tcttcttca |
46604759 |
T |
 |
| Q |
284 |
tccctcttttttctcttattcatctcc |
310 |
Q |
| |
|
|| |||| |||| |||| ||||||||| |
|
|
| T |
46604760 |
tctctctgttttttcttcttcatctcc |
46604786 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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