View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1911_low_62 (Length: 243)
Name: NF1911_low_62
Description: NF1911
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1911_low_62 |
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Alignment Details
Target: chr7 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 11 - 239
Target Start/End: Original strand, 43356650 - 43356878
Alignment:
| Q |
11 |
atgataaaagatgatggatagtgggtatagctgcttttgcccccacaccatgcagtgatcattcaaaatgacttttgaattttgataaagcaactcaaca |
110 |
Q |
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| T |
43356650 |
atgataaaagatgatggatagtgggtatagctgcttttgcccccacaccatgcagtgatcattcaaaatgacttttgaattttgataaagcaactcaaca |
43356749 |
T |
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| Q |
111 |
caacaaagcctttcattttctactttatatagtcaatagaaactaaaagagaaaacttatctccaacccaattgatctagctcttaatctatactcacaa |
210 |
Q |
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| T |
43356750 |
caacaaagcctttcattttctactttatatagtcaatagaaactaaaagagaaaacttatctccaacccaattgatctagctcttaatctatactcacaa |
43356849 |
T |
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| Q |
211 |
tcctccatacacttcattctcaaaacctc |
239 |
Q |
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||||||||||| ||||||||||| |||| |
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| T |
43356850 |
tcctccatacaagtcattctcaaatcctc |
43356878 |
T |
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