View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1911_low_77 (Length: 235)
Name: NF1911_low_77
Description: NF1911
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1911_low_77 |
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Alignment Details
Target: chr7 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 3 - 221
Target Start/End: Original strand, 43357063 - 43357281
Alignment:
| Q |
3 |
agatatgttctgcatccaaaaatgccccacttcaccgttcttcgacgaccacaaagtaaatgattcgaggtggacctcagcccattctggaacagtaaat |
102 |
Q |
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| T |
43357063 |
agatatgttctgcatccaaaaatgccccacttcaccgttcttcgacgaccacaaagtaaatgattcgaggtggacctcagcccattccggaacagtaaat |
43357162 |
T |
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| Q |
103 |
aaccttactgagctcgagtttagccttgaccgaagtgagaacgatgatgatgataagatacatcattttgaggaattacaagaattcaatttcaaattag |
202 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43357163 |
aaccttactgagctcgagtttagccttgaccgaagtgagaacgatgatgatgataagatacatcattttgaggaattacaagaattcaatttcaaattag |
43357262 |
T |
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| Q |
203 |
ctacaacaaaacaagtagc |
221 |
Q |
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||||||||||||||||||| |
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| T |
43357263 |
ctacaacaaaacaagtagc |
43357281 |
T |
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