View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19120_low_10 (Length: 242)
Name: NF19120_low_10
Description: NF19120
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19120_low_10 |
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Alignment Details
Target: chr4 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 23606660 - 23606865
Alignment:
| Q |
1 |
tttaatttctatatatcgatgatggtttannnnnnnacatatctttttagatatgttatgtgtaggtgtaaaagcattttatcgtaagtgcatataaatt |
100 |
Q |
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| T |
23606660 |
tttaatttctatatatcgatgatggtttatttttttacatatctttttagatatgttaagtgtaggtgtaaaagcattttaccgtaagtgcatagaaatt |
23606759 |
T |
|
| Q |
101 |
aacctcaatatataaattaaaatctttatgcaaataaccttttcctatgtggaacttttgtttttgaatatttctttttgagattatagaaccgagtcta |
200 |
Q |
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|
|||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
23606760 |
aacctctatatataaattaaaatctttatgataataaccttttcctatgtggaacttttgtttttgaatatttctttttgagattataaaaccgagtcta |
23606859 |
T |
|
| Q |
201 |
taacca |
206 |
Q |
| |
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|||||| |
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|
| T |
23606860 |
taacca |
23606865 |
T |
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