View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19121_high_6 (Length: 368)

Name: NF19121_high_6
Description: NF19121
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19121_high_6
NF19121_high_6
[»] chr4 (10 HSPs)
chr4 (84-358)||(19469471-19469744)
chr4 (119-337)||(45068143-45068362)
chr4 (16-86)||(19469340-19469410)
chr4 (133-326)||(50655104-50655297)
chr4 (280-363)||(4866798-4866881)
chr4 (251-348)||(23012348-23012445)
chr4 (251-347)||(30251406-30251502)
chr4 (251-322)||(24065133-24065204)
chr4 (188-348)||(44616668-44616832)
chr4 (148-322)||(48309656-48309830)
[»] chr5 (5 HSPs)
chr5 (191-337)||(27639467-27639613)
chr5 (259-337)||(41650523-41650601)
chr5 (148-242)||(16154554-16154648)
chr5 (187-348)||(3465310-3465471)
chr5 (285-347)||(33861945-33862007)
[»] chr6 (3 HSPs)
chr6 (127-363)||(9557361-9557598)
chr6 (148-330)||(51879-52063)
chr6 (280-322)||(9755698-9755740)
[»] chr3 (7 HSPs)
chr3 (251-346)||(26982040-26982135)
chr3 (124-334)||(34213011-34213221)
chr3 (251-325)||(1045402-1045476)
chr3 (187-308)||(1762039-1762160)
chr3 (251-320)||(4778022-4778091)
chr3 (280-319)||(2833336-2833375)
chr3 (280-322)||(41640843-41640885)
[»] chr7 (7 HSPs)
chr7 (191-321)||(46028474-46028604)
chr7 (260-337)||(40188205-40188282)
chr7 (251-361)||(23176896-23177006)
chr7 (122-322)||(26557857-26558058)
chr7 (280-320)||(33743491-33743531)
chr7 (262-316)||(12258376-12258430)
chr7 (280-322)||(33888635-33888677)
[»] chr8 (6 HSPs)
chr8 (132-312)||(41926890-41927071)
chr8 (251-348)||(34152026-34152123)
chr8 (260-318)||(42032732-42032790)
chr8 (252-361)||(24604828-24604937)
chr8 (191-348)||(42241236-42241392)
chr8 (251-335)||(7656821-7656905)
[»] chr2 (4 HSPs)
chr2 (262-358)||(43411515-43411611)
chr2 (261-322)||(10994432-10994493)
chr2 (280-348)||(41074570-41074637)
chr2 (130-318)||(29682570-29682758)
[»] chr1 (9 HSPs)
chr1 (238-348)||(52372647-52372757)
chr1 (122-322)||(51871063-51871264)
chr1 (262-358)||(13297595-13297691)
chr1 (251-347)||(21926609-21926704)
chr1 (251-346)||(9644361-9644456)
chr1 (251-348)||(40799641-40799738)
chr1 (251-348)||(44503962-44504059)
chr1 (280-322)||(25410606-25410648)
chr1 (280-320)||(3227685-3227725)
[»] scaffold0329 (1 HSPs)
scaffold0329 (256-348)||(18433-18525)
[»] scaffold0042 (1 HSPs)
scaffold0042 (280-330)||(83243-83293)


Alignment Details
Target: chr4 (Bit Score: 199; Significance: 1e-108; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 84 - 358
Target Start/End: Original strand, 19469471 - 19469744
Alignment:
Q  84 tgggttgggtgtttgttccccccttagccttgctcagtagttccaggcctttacgagcttaggtgggggaagagagttaggtcaggtctgattcttattt 183  Q
    |||||||||||||||||||||| || | ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  19469471 tgggttgggtgtttgttccccctttggtcttgctcagcagttccaggcctttacgggcttaggtgggggaagagagttaggtcaggtctgattcttattt 19469570  T
Q  184 cgtatgttgttatttggaccatctggacttcctgaaatgacattttatttgctagtggcgcccattctgaggagcatgtggtggatagagcaaagttctt 283  Q
     |||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  19469571 tgtatgttgttatttggaccatctgaacttcctggaatgacattttatttgctggtggcgcccattctgaggagcatgtggtggatagagcaaagttctt 19469670  T
Q  284 agcttggaagtggttcctggctaagtgccctgctagttcttgcacttatcatgaatggaaggtgcggcctgtcct 358  Q
    |||||||||||||||||| | ||||||  |||||||||| |||||||||||||| ||| |||||  |||||||||    
T  19469671 agcttggaagtggttcctagttaagtg-tctgctagttcctgcacttatcatgagtgggaggtgtagcctgtcct 19469744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 119 - 337
Target Start/End: Complemental strand, 45068362 - 45068143
Alignment:
Q  119 agtagttccaggcctttacgagcttaggtggggg-aagagagttaggtcaggtctgattcttatttcgtatgttgttatttggaccatctggacttcctg 217  Q
    ||||||||| | | |||||| | ||||||||||| |||||||| |||| |||| || ||||| |||   ||||| ||||||||| ||||||||| |||      
T  45068362 agtagttcctgtcttttacgggtttaggtggggggaagagagtgaggttaggtttgcttcttgtttgacatgtttttatttggaacatctggacgtccct 45068263  T
Q  218 aaatgacattttatttgctagtggcgcccattctgaggagcatgtggtggatagagcaaagttcttagcttggaagtggttcctggctaagtgccctgct 317  Q
     || ||| |||| ||| ||||| || | | |  |||||||| ||| ||||||||||| ||  ||||||||||||||||||||||||||||||||||||      
T  45068262 gaacgaccttttgttttctagttgcactcttcatgaggagcctgtagtggatagagctaaactcttagcttggaagtggttcctggctaagtgccctggc 45068163  T
Q  318 agttcttgcacttatcatga 337  Q
    ||||| | ||||||||||||    
T  45068162 agttcctacacttatcatga 45068143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 16 - 86
Target Start/End: Original strand, 19469340 - 19469410
Alignment:
Q  16 aatacattttcttgaacaaacctaacaagggctagggcgtggcttttgttatgcgccgtcagagtccttgg 86  Q
    ||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||    
T  19469340 aatacattttcttgaacaaacctaacaagggctggggtgtggcttttgttatgcaccgtcagagtccttgg 19469410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 133 - 326
Target Start/End: Complemental strand, 50655297 - 50655104
Alignment:
Q  133 tttacgagcttaggtgggggaagagagttaggtcaggtctgattcttatttcgtatgttgttatttggaccatctggacttcctgaaatgacattttatt 232  Q
    |||||| ||||||| |||||||||||||||||| |||| || | ||  ||| | ||| ||||||||||||||||||||| ||| | |||||| || | ||    
T  50655297 tttacgggcttaggagggggaagagagttaggttaggtttgctcctggtttggcatgctgttatttggaccatctggacgtcccgtaatgaccttatctt 50655198  T
Q  233 tgctagtggcgcccattctgaggagcatgtggtggatagagcaaagttcttagcttggaagtggttcctggctaagtgccctgctagttcttgc 326  Q
    | || |||||||||     ||||||  |||| |||||   || ||  ||||||||||||||||||||||||||||||| |||||||||||||||    
T  50655197 ttctggtggcgccctcagagaggagtctgtgatggatcaggctaaactcttagcttggaagtggttcctggctaagtgtcctgctagttcttgc 50655104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 280 - 363
Target Start/End: Original strand, 4866798 - 4866881
Alignment:
Q  280 tcttagcttggaagtggttcctggctaagtgccctgctagttcttgcacttatcatgaatggaaggtgcggcctgtcctatgct 363  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||| ||||||  |||||||| ||||    
T  4866798 tcttagcttggaagtggttcctggctaagtgccttgctagtccttgcacttatcatgagtgggaggtgcaacctgtcctgtgct 4866881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 251 - 348
Target Start/End: Complemental strand, 23012445 - 23012348
Alignment:
Q  251 tgaggagcatgtggtggatagagcaaagttcttagcttggaagtggttcctggctaagtgccctgctagttcttgcacttatcatgaatggaaggtgc 348  Q
    ||||||||  |||||||||||||  ||  |||||| |||||| |||||| ||||||||||   ||||||||  |||||||||||||||||| ||||||    
T  23012445 tgaggagcccgtggtggatagagtgaaactcttagtttggaattggttcatggctaagtgttgtgctagtttctgcacttatcatgaatgggaggtgc 23012348  T

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Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 251 - 347
Target Start/End: Complemental strand, 30251502 - 30251406
Alignment:
Q  251 tgaggagcatgtggtggatagagcaaagttcttagcttggaagtggttcctggctaagtgccctgctagttcttgcacttatcatgaatggaaggtg 347  Q
    |||||||  ||||||||||||||  ||  |||| ||||| |||||||||||||||||||||||||  ||||||||| ||  |||||| ||| |||||    
T  30251502 tgaggagtctgtggtggatagagtgaaactcttggcttgaaagtggttcctggctaagtgccctggaagttcttgctctgttcatgagtgggaggtg 30251406  T

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Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 322
Target Start/End: Complemental strand, 24065204 - 24065133
Alignment:
Q  251 tgaggagcatgtggtggatagagcaaagttcttagcttggaagtggttcctggctaagtgccctgctagttc 322  Q
    |||||||| ||||||||||||||  ||  ||||| | |||||||||||| ||||||||| ||||||||||||    
T  24065204 tgaggagcctgtggtggatagagtgaaactcttaacctggaagtggttcatggctaagtaccctgctagttc 24065133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 188 - 348
Target Start/End: Complemental strand, 44616832 - 44616668
Alignment:
Q  188 tgttgttatttggaccatctggacttcctgaaatgac----attttatttgctagtggcgcccattctgaggagcatgtggtggatagagcaaagttctt 283  Q
    |||||||||||||| ||||||||| | ||| ||||||    ||||| ||| || |  |||||| |  |||||||| | ||| ||||||||  ||| ||||    
T  44616832 tgttgttatttggatcatctggacgtgctggaatgacctttatttttttttctggaagcgcccttcgtgaggagcctatggcggatagagagaagctctt 44616733  T
Q  284 agcttggaagtggttcctggctaagtgccctgctagttcttgcacttatcatgaatggaaggtgc 348  Q
    |||||| |||||| || |||||||| ||| ||||| ||||||||||||  |||| ||| ||||||    
T  44616732 agcttgtaagtggctcatggctaagggccttgctaattcttgcacttacgatgagtgggaggtgc 44616668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 148 - 322
Target Start/End: Complemental strand, 48309830 - 48309656
Alignment:
Q  148 gggggaagagagttaggtcaggtctgattcttatttcgtatgttgttatttggaccatctggacttcctgaaatgacattttatttgctagtggcgccca 247  Q
    |||||||||||||||||| |||| || ||||| ||| | || |||||||||||||||| ||  | |||   |||||| || | |||||| |||||   |     
T  48309830 gggggaagagagttaggttaggtttgcttcttgtttggcatattgttatttggaccatttgagcatcccagaatgaccttatctttgctggtggcttact 48309731  T
Q  248 ttctgaggagcatgtggtggatagagcaaagttcttagcttggaagtggttcctggctaagtgccctgctagttc 322  Q
        |||||||  |||||||||||||  ||  ||||||||||||||| ||||| ||||||||  |||||||||||    
T  48309730 ccgagaggagccagtggtggatagagtgaaactcttagcttggaagtcgttccgggctaagtttcctgctagttc 48309656  T

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Target: chr5 (Bit Score: 79; Significance: 7e-37; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 191 - 337
Target Start/End: Complemental strand, 27639613 - 27639467
Alignment:
Q  191 tgttatttggaccatctggacttcctgaaatgacattttatttgctagtggcgcccattctgaggagcatgtggtggatagagcaaagttcttagcttgg 290  Q
    ||||||||||||||||||||||| |  ||||||| || | |||||| ||||| |||||  |||| ||  |||||||||||||||||| ||||||||||||    
T  27639613 tgttatttggaccatctggacttacataaatgactttatgtttgctggtggcacccatagtgagcagactgtggtggatagagcaaaattcttagcttgg 27639514  T
Q  291 aagtggttcctggctaagtgccctgctagttcttgcacttatcatga 337  Q
    ||||||||| ||||||| || ||||||||||||||||||||||||||    
T  27639513 aagtggttcatggctaaatgtcctgctagttcttgcacttatcatga 27639467  T

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Target: chr5; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 259 - 337
Target Start/End: Original strand, 41650523 - 41650601
Alignment:
Q  259 atgtggtggatagagcaaagttcttagcttggaagtggttcctggctaagtgccctgctagttcttgcacttatcatga 337  Q
    |||||||||||||||| ||  |||||||||||||||||||||||||||||||| ||||||| || |||||||| |||||    
T  41650523 atgtggtggatagagcgaaactcttagcttggaagtggttcctggctaagtgctctgctagctcctgcacttaccatga 41650601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 242
Target Start/End: Complemental strand, 16154648 - 16154554
Alignment:
Q  148 gggggaagagagttaggtcaggtctgattcttatttcgtatgttgttatttggaccatctggacttcctgaaatgacattttatttgctagtggc 242  Q
    |||||||||||||||||| |||| || ||||||||| | ||| | ||||||||||||| ||||| || | ||||||| || | |||||| |||||    
T  16154648 gggggaagagagttaggttaggtttgcttcttatttggcatgctattatttggaccatttggacgtcttaaaatgaccttatctttgctggtggc 16154554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 187 - 348
Target Start/End: Complemental strand, 3465471 - 3465310
Alignment:
Q  187 atgttgttatttggaccatctggacttcctgaaatgacattttatttgctagtggcgcccattctgaggagcatgtggtggatagagcaaagttcttagc 286  Q
    ||||||||||||||||||||| ||| ||| |||| ||| || | ||| || ||||| ||  |   ||||||  | ||||||||||||| ||  |||||||    
T  3465471 atgttgttatttggaccatctagacatccagaaacgaccttattttttctggtggcacctttcgagaggagtctttggtggatagagcgaaactcttagc 3465372  T
Q  287 ttggaagtggttcctggctaagtgccctgctagttcttgcacttatcatgaatggaaggtgc 348  Q
    ||||||||| ||| |||| ||| |  || ||||||| |||||||| ||||| ||| ||||||    
T  3465371 ttggaagtgtttcttggcgaagcgttctactagttcctgcacttaccatgagtgggaggtgc 3465310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 347
Target Start/End: Original strand, 33861945 - 33862007
Alignment:
Q  285 gcttggaagtggttcctggctaagtgccctgctagttcttgcacttatcatgaatggaaggtg 347  Q
    |||||||||||| ||| |||||||||||||| |||||| ||| ||| |||||| ||| |||||    
T  33861945 gcttggaagtggctcccggctaagtgccctggtagttcctgctcttttcatgagtgggaggtg 33862007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 70; Significance: 2e-31; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 127 - 363
Target Start/End: Complemental strand, 9557598 - 9557361
Alignment:
Q  127 caggcctttacgagcttaggtgggg-gaagagagttaggtcaggtctgattcttatttcgtatgttgttatttggaccatctggacttcctgaaatgaca 225  Q
    |||| ||||||  |||||||||||  |||||||||||||| | || || ||||| ||| | ||||||||||||||||||||| ||| ||| ||||||||     
T  9557598 cagggctttacaggcttaggtgggaagaagagagttaggttatgtttggttcttgttttgcatgttgttatttggaccatcttgacgtcccgaaatgacc 9557499  T
Q  226 ttttatttgctagtggcgcccattctgaggagcatgtggtggatagagcaaagttcttagcttggaagtggttcctggctaagtgccctgctagttcttg 325  Q
    || | | |||| ||||| |||||| |||   |   ||||||||| | ||||| ||||||||||||||||| |||||| ||||||| |||||||| || ||    
T  9557498 ttatttctgctggtggcacccattgtgataggtcggtggtggatggggcaaaattcttagcttggaagtgattcctgactaagtgtcctgctagctcctg 9557399  T
Q  326 cacttatcatgaatggaaggtgcggcctgtcctatgct 363  Q
    |||||||||||| ||| |||||| ||| ||||| ||||    
T  9557398 cacttatcatgagtgggaggtgcagcccgtcctttgct 9557361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 148 - 330
Target Start/End: Original strand, 51879 - 52063
Alignment:
Q  148 gggggaagagagttaggtcaggtctgattcttatttcg--tatgttgttatttggaccatctggacttcctgaaatgacattttatttgctagtggcgcc 245  Q
    |||||||||||||||||| | ||||| | || |||| |  |||| ||||||||||||||||||||| ||| | |||||| || | ||| || ||||| ||    
T  51879 gggggaagagagttaggttaagtctgctcctgatttggcatatgctgttatttggaccatctggacgtcccgtaatgaccttatcttttctggtggctcc 51978  T
Q  246 cattctgaggagcatgtggtggatagagcaaagttcttagcttggaagtggttcctggctaagtgccctgctagttcttgcactt 330  Q
    |     ||||||| | |||||||| |||| ||  ||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  51979 ctcagagaggagcctatggtggatcgagctaaactcttagcttggaagtggttcctggctaagtgtcttgctagttcttgcactt 52063  T

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Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 322
Target Start/End: Complemental strand, 9755740 - 9755698
Alignment:
Q  280 tcttagcttggaagtggttcctggctaagtgccctgctagttc 322  Q
    |||||| |||||||||||| | |||||||||||||||||||||    
T  9755740 tcttagtttggaagtggtttcgggctaagtgccctgctagttc 9755698  T

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Target: chr3 (Bit Score: 56; Significance: 4e-23; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 251 - 346
Target Start/End: Complemental strand, 26982135 - 26982040
Alignment:
Q  251 tgaggagcatgtggtggatagagcaaagttcttagcttggaagtggttcctggctaagtgccctgctagttcttgcacttatcatgaatggaaggt 346  Q
    |||||||| |||||||||||||| |||  |||||||||||||||||||| |||||||||||||||| ||||| ||||| |||||||| ||| ||||    
T  26982135 tgaggagcctgtggtggatagagtaaaactcttagcttggaagtggttcttggctaagtgccctgcaagttcctgcacctatcatgagtgggaggt 26982040  T

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Target: chr3; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 124 - 334
Target Start/End: Original strand, 34213011 - 34213221
Alignment:
Q  124 ttccaggcctttacgagcttaggtgggggaagagagttaggtcaggtctgattcttatttcgtatgttgttatttggaccatctggacttcctgaaatga 223  Q
    ||||| ||||||||||||||||| ||||||| |||||||| | ||||||  ||||  |||   ||| |||||| |||||||| ||||| |||  ||| ||    
T  34213011 ttccacgcctttacgagcttaggagggggaacagagttagattaggtctatttctagtttgccatgatgttatatggaccatttggacgtcccaaaacga 34213110  T
Q  224 cattttatttgctagtggcgcccattctgaggagcatgtggtggatagagcaaagttcttagcttggaagtggttcctggctaagtgccctgctagttct 323  Q
    | || | ||  || ||||||| |    |||||| | ||| ||||||||||  ||  |||||||||||||||||||| |||||||||||| |||||||||     
T  34213111 ccttattttctctggtggcgctctccgtgaggaacctgttgtggatagagtgaaactcttagcttggaagtggttcatggctaagtgccatgctagttca 34213210  T
Q  324 tgcacttatca 334  Q
    |||||||||||    
T  34213211 tgcacttatca 34213221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 251 - 325
Target Start/End: Complemental strand, 1045476 - 1045402
Alignment:
Q  251 tgaggagcatgtggtggatagagcaaagttcttagcttggaagtggttcctggctaagtgccctgctagttcttg 325  Q
    ||||||||  ||||||||||| |  ||  ||| ||||||||||||||||||||||||||||||||||||||||||    
T  1045476 tgaggagccagtggtggatagggttaaactctcagcttggaagtggttcctggctaagtgccctgctagttcttg 1045402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 187 - 308
Target Start/End: Complemental strand, 1762160 - 1762039
Alignment:
Q  187 atgttgttatttggaccatctggacttcctgaaatgacattttatttgctagtggcgcccattctgaggagcatgtggtggatagagcaaagttcttagc 286  Q
    ||||||||||||||||||||||||| ||||| |||||  || | |||  | |||||| ||||  ||||| |||| || | |||||||| ||  |||||||    
T  1762160 atgttgttatttggaccatctggacgtcctggaatgagcttattttttttggtggcgtccatagtgaggtgcatttgatagatagagcgaaactcttagc 1762061  T
Q  287 ttggaagtggttcctggctaag 308  Q
    ||||||||||||| ||||||||    
T  1762060 ttggaagtggttcatggctaag 1762039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 251 - 320
Target Start/End: Original strand, 4778022 - 4778091
Alignment:
Q  251 tgaggagcatgtggtggatagagcaaagttcttagcttggaagtggttcctggctaagtgccctgctagt 320  Q
    |||||||| ||||||||||||||  ||  |||||| |||||||||||||| ||||| |||||||||||||    
T  4778022 tgaggagcctgtggtggatagagttaaactcttagtttggaagtggttccaggctaggtgccctgctagt 4778091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 280 - 319
Target Start/End: Complemental strand, 2833375 - 2833336
Alignment:
Q  280 tcttagcttggaagtggttcctggctaagtgccctgctag 319  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  2833375 tcttagcttggaagtggttcatggctaagtgccctgctag 2833336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 322
Target Start/End: Original strand, 41640843 - 41640885
Alignment:
Q  280 tcttagcttggaagtggttcctggctaagtgccctgctagttc 322  Q
    ||||| ||||||||||||| | |||||||||||||||||||||    
T  41640843 tcttaacttggaagtggtttcgggctaagtgccctgctagttc 41640885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 2e-22; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 191 - 321
Target Start/End: Complemental strand, 46028604 - 46028474
Alignment:
Q  191 tgttatttggaccatctggacttcctgaaatgacattttatttgctagtggcgcccattctgaggagcatgtggtggatagagcaaagttcttagcttgg 290  Q
    |||||||||||||||||| |||||| | |||||| || | ||| ||  ||| ||||||  ||||| |  ||||||||||||||| ||  |||||||||||    
T  46028604 tgttatttggaccatctgaacttcccggaatgaccttgttttttctgatggtgcccatagtgaggggtctgtggtggatagagcgaaactcttagcttgg 46028505  T
Q  291 aagtggttcctggctaagtgccctgctagtt 321  Q
    |||||||||||||||||||| ||||||||||    
T  46028504 aagtggttcctggctaagtgtcctgctagtt 46028474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 260 - 337
Target Start/End: Complemental strand, 40188282 - 40188205
Alignment:
Q  260 tgtggtggatagagcaaagttcttagcttggaagtggttcctggctaagtgccctgctagttcttgcacttatcatga 337  Q
    ||||||||||| ||||||  || ||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  40188282 tgtggtggataaagcaaaactcatagcttggaagtggttcttgcctaagtgccctgctagttcttgcacttatcatga 40188205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 251 - 361
Target Start/End: Complemental strand, 23177006 - 23176896
Alignment:
Q  251 tgaggagcatgtggtggatagagcaaagttcttagcttggaagtggttcctggctaagtgccctgctagttcttgcacttatcatgaatggaaggtgcgg 350  Q
    |||||||| ||||||| ||||||  ||  |||||||||||||| ||||||| || ||||| | ||||||||| |||||||||||||| | | |||||| |    
T  23177006 tgaggagcctgtggtgtatagagtgaaactcttagcttggaagcggttccttgccaagtgtcatgctagttcatgcacttatcatgagttggaggtgcag 23176907  T
Q  351 cctgtcctatg 361  Q
    || ||||||||    
T  23176906 cccgtcctatg 23176896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 122 - 322
Target Start/End: Complemental strand, 26558058 - 26557857
Alignment:
Q  122 agttccaggcctttacgagcttaggtgggggaag-agagttaggtcaggtctgattcttatttcgtatgttgttatttggaccatctggacttcctgaaa 220  Q
    |||| |||||||||||| | ||||| ||||| || |||||||||| |||| || ||||| ||| | ||||||||||||||||||| ||| | ||||  ||    
T  26558058 agtttcaggcctttacgggtttaggaggggggaggagagttaggttaggtttgcttcttgtttggcatgttgttatttggaccatttgggcatcctagaa 26557959  T
Q  221 tgacattttatttgctagtggcgcccattctgaggagcatgtggtggatagagcaaagttcttagcttggaagtggttcctggctaagtgccctgctagt 320  Q
     |||  | | |||||| |||||   |    |||||||| ||||||||| ||||  ||  | ||||||||| ||||| |||||||||||||||||||||||    
T  26557958 cgaccgtatctttgctggtggcttactccgtgaggagcctgtggtggacagagttaaacttttagcttggtagtggctcctggctaagtgccctgctagt 26557859  T
Q  321 tc 322  Q
    ||    
T  26557858 tc 26557857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 320
Target Start/End: Original strand, 33743491 - 33743531
Alignment:
Q  280 tcttagcttggaagtggttcctggctaagtgccctgctagt 320  Q
    |||||||||| ||||||||| ||||||||||||||||||||    
T  33743491 tcttagcttgaaagtggttcttggctaagtgccctgctagt 33743531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 316
Target Start/End: Original strand, 12258376 - 12258430
Alignment:
Q  262 tggtggatagagcaaagttcttagcttggaagtggttcctggctaagtgccctgc 316  Q
    ||||||||||||  ||  |||||||||| |||||||||||||||||||| |||||    
T  12258376 tggtggatagagttaaactcttagcttgaaagtggttcctggctaagtgtcctgc 12258430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 322
Target Start/End: Original strand, 33888635 - 33888677
Alignment:
Q  280 tcttagcttggaagtggttcctggctaagtgccctgctagttc 322  Q
    |||||| |||||||||||| | |||||||||||||||||||||    
T  33888635 tcttagattggaagtggtttcgggctaagtgccctgctagttc 33888677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 6e-22; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 132 - 312
Target Start/End: Original strand, 41926890 - 41927071
Alignment:
Q  132 ctttacgagcttaggtgg-gggaagagagttaggtcaggtctgattcttatttcgtatgttgttatttggaccatctggacttcctgaaatgacatttta 230  Q
    ||||||| |||||||||| |||| ||||| ||||| ||||||| ||||  ||| | ||| ||||||||||||||| ||||||||  | |||||  || |     
T  41926890 ctttacgggcttaggtggtgggaggagagctaggttaggtctgcttctggtttggcatgctgttatttggaccatttggacttctcggaatgatcttatt 41926989  T
Q  231 tttgctagtggcgcccattctgaggagcatgtggtggatagagcaaagttcttagcttggaagtggttcctggctaagtgcc 312  Q
    ||| || |||| || | |   ||||||| ||||||||||||||| ||  |||||||||||||||||||||||||||||||||    
T  41926990 ttttctggtggtgctcttcgagaggagcctgtggtggatagagcgaatctcttagcttggaagtggttcctggctaagtgcc 41927071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 251 - 348
Target Start/End: Complemental strand, 34152123 - 34152026
Alignment:
Q  251 tgaggagcatgtggtggatagagcaaagttcttagcttggaagtggttcctggctaagtgccctgctagttcttgcacttatcatgaatggaaggtgc 348  Q
    |||||||| ||| ||||||||||| ||  ||||||||||||||||||||||||||||| |||||   ||||| ||||||| |||||| ||| ||||||    
T  34152123 tgaggagcctgttgtggatagagctaaactcttagcttggaagtggttcctggctaagcgccctagcagttcctgcacttttcatgagtgggaggtgc 34152026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 318
Target Start/End: Original strand, 42032732 - 42032790
Alignment:
Q  260 tgtggtggatagagcaaagttcttagcttggaagtggttcctggctaagtgccctgcta 318  Q
    ||||||| ||||||| ||  |||||||||||||||||||||||||||||||||||||||    
T  42032732 tgtggtgaatagagcgaaactcttagcttggaagtggttcctggctaagtgccctgcta 42032790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 252 - 361
Target Start/End: Original strand, 24604828 - 24604937
Alignment:
Q  252 gaggagcatgtggtggatagagcaaagttcttagcttggaagtggttcctggctaagtgccctgctagttcttgcacttatcatgaatggaaggtgcggc 351  Q
    |||||||  |||||||||||||| ||  |||||| ||| ||||||||| |||||||||| |||||||||| || | |||||||||| ||| |||||| ||    
T  24604828 gaggagctggtggtggatagagcgaaactcttagattgaaagtggttcttggctaagtggcctgctagttttttctcttatcatgagtgggaggtgcagc 24604927  T
Q  352 ctgtcctatg 361  Q
    |  |||||||    
T  24604928 ccatcctatg 24604937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 191 - 348
Target Start/End: Complemental strand, 42241392 - 42241236
Alignment:
Q  191 tgttatttggaccatctggacttcctgaaatgacattttatttgctagtggcgcccattctgaggagcatgtggtggatagagcaaagttcttagcttgg 290  Q
    ||||||||| ||||||||||| ||| |||| ||| || | ||| || |||||||||    |||||||| | ||||||||| ||| ||  |||||||||||    
T  42241392 tgttatttgaaccatctggacatccagaaacgaccttattttt-ctggtggcgccctccgtgaggagcctttggtggataaagcgaaactcttagcttgg 42241294  T
Q  291 aagtggttcctggctaagtgccctgctagttcttgcacttatcatgaatggaaggtgc 348  Q
    |||||||||||||| ||| || || ||||||| |||||||| | ||| ||| ||||||    
T  42241293 aagtggttcctggcgaagcgctctactagttcctgcacttaccttgagtgggaggtgc 42241236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 251 - 335
Target Start/End: Complemental strand, 7656905 - 7656821
Alignment:
Q  251 tgaggagcatgtggtggatagagcaaagttcttagcttggaagtggttcctggctaagtgccctgctagttcttgcacttatcat 335  Q
    |||||||| ||||||||||||||  ||  |||||  |||||||||||||||  ||||||| ||| ||| ||||||||||||||||    
T  7656905 tgaggagcctgtggtggatagagtgaaactcttaatttggaagtggttcctaactaagtgtcctactaattcttgcacttatcat 7656821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 6e-19; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 262 - 358
Target Start/End: Original strand, 43411515 - 43411611
Alignment:
Q  262 tggtggatagagcaaagttcttagcttggaagtggttcctggctaagtgccctgctagttcttgcacttatcatgaatggaaggtgcggcctgtcct 358  Q
    ||||||||||||| ||  |||||||||| ||||| |||||||||||||| |||||||| || |||||||||||||| ||| |||||| ||| |||||    
T  43411515 tggtggatagagcgaaactcttagcttgaaagtgtttcctggctaagtgtcctgctagctcctgcacttatcatgagtgggaggtgcagcccgtcct 43411611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 261 - 322
Target Start/End: Original strand, 10994432 - 10994493
Alignment:
Q  261 gtggtggatagagcaaagttcttagcttggaagtggttcctggctaagtgccctgctagttc 322  Q
    |||||||||||||  ||  |||||||||||||||||||||||||||||||||||||||||||    
T  10994432 gtggtggatagagttaaactcttagcttggaagtggttcctggctaagtgccctgctagttc 10994493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 280 - 348
Target Start/End: Complemental strand, 41074637 - 41074570
Alignment:
Q  280 tcttagcttggaagtggttcctggctaagtgccctgctagttcttgcacttatcatgaatggaaggtgc 348  Q
    |||||||||| |||||||||||||||||||||||||||||| ||| ||||| |||||| ||||||||||    
T  41074637 tcttagcttgaaagtggttcctggctaagtgccctgctagtcctt-cacttttcatgagtggaaggtgc 41074570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 130 - 318
Target Start/End: Original strand, 29682570 - 29682758
Alignment:
Q  130 gcctttacgagcttaggtgggggaagagagttaggtcaggtctgattcttatttcgtatgttgttatttggaccatctggacttcctgaaatgacatttt 229  Q
    ||||||||| | || || |||||| ||||||||||| |||| || ||||| ||| | ||||||||||||||||||| ||| | ||| | |||||| || |    
T  29682570 gcctttacggggttgggagggggaggagagttaggttaggtttgcttcttgtttggcatgttgttatttggaccatttgggcgtcccggaatgaccttat 29682669  T
Q  230 atttgctagtggcgcccattctgaggagcatgtggtggatagagcaaagttcttagcttggaagtggttcctggctaagtgccctgcta 318  Q
     |||||| |||| || |     || ||||  |||||||||||||  ||  ||||||||| ||||||||||| |||||||  ||||||||    
T  29682670 ctttgctggtggtgctctccgagatgagctagtggtggatagagttaaactcttagcttagaagtggttccaggctaagcaccctgcta 29682758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 9e-18; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 238 - 348
Target Start/End: Original strand, 52372647 - 52372757
Alignment:
Q  238 gtggcgcccattctgaggagcatgtggtggatagagcaaagttcttagcttggaagtggttcctggctaagtgccctgctagttcttgcacttatcatga 337  Q
    |||||||||||  ||||| |  ||||||||||||||| ||  ||||||||| ||||||||||||||||| ||||||||||||||| ||| ||| | ||||    
T  52372647 gtggcgcccatagtgaggggtctgtggtggatagagcgaaactcttagcttagaagtggttcctggctaggtgccctgctagttcctgctctttttatga 52372746  T
Q  338 atggaaggtgc 348  Q
     ||| ||||||    
T  52372747 gtgggaggtgc 52372757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 122 - 322
Target Start/End: Original strand, 51871063 - 51871264
Alignment:
Q  122 agttccaggcctttacgagcttaggtgggggaa-gagagttaggtcaggtctgattcttatttcgtatgttgttatttggaccatctggacttcctgaaa 220  Q
    |||| |||||||||||| | ||||||||||| | ||||||||||| |||| || ||||| ||| | ||| |||||| |||||||| |||||  || ||||    
T  51871063 agtttcaggcctttacgggtttaggtggggggacgagagttaggttaggtttgcttcttgtttggcatgctgttatctggaccatttggacgacccgaaa 51871162  T
Q  221 tgacattttatttgctagtggcgcccattctgaggagcatgtggtggatagagcaaagttcttagcttggaagtggttcctggctaagtgccctgctagt 320  Q
    |||| || | |||| |  ||| |  |    ||||||||  ||||||||||||   ||  ||||||||||||||||||||||| |||||||||||||||||    
T  51871163 tgaccttatctttgttgttggtgttctccgtgaggagccagtggtggatagaattaaactcttagcttggaagtggttcctgactaagtgccctgctagt 51871262  T
Q  321 tc 322  Q
    ||    
T  51871263 tc 51871264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 262 - 358
Target Start/End: Original strand, 13297595 - 13297691
Alignment:
Q  262 tggtggatagagcaaagttcttagcttggaagtggttcctggctaagtgccctgctagttcttgcacttatcatgaatggaaggtgcggcctgtcct 358  Q
    ||||||||||||  ||  |||||||||| || |||||| |||||||||| ||||||||||| |||||||||||||| ||| |||||| |||| ||||    
T  13297595 tggtggatagagtgaaactcttagcttgaaattggttcatggctaagtgtcctgctagttcctgcacttatcatgagtgggaggtgcagcctctcct 13297691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 347
Target Start/End: Original strand, 21926609 - 21926704
Alignment:
Q  251 tgaggagcatgtggtggatagagcaaagttcttagcttggaagtggttcctggctaagtgccctgctagttcttgcacttatcatgaatggaaggtg 347  Q
    |||||||  ||||||||||||||  ||  ||||||| |||||||||||| |||||||||||||||||||||| ||  |||||||||| ||| |||||    
T  21926609 tgaggagtctgtggtggatagagtgaaactcttagcctggaagtggttc-tggctaagtgccctgctagttcatgttcttatcatgagtgggaggtg 21926704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 251 - 346
Target Start/End: Original strand, 9644361 - 9644456
Alignment:
Q  251 tgaggagcatgtggtggatagagcaaagttcttagcttggaagtggttcctggctaagtgccctgctagttcttgcacttatcatgaatggaaggt 346  Q
    |||||||| | ||||||||||||| ||  |||| | ||||||||||||||| |||||||| ||| ||||||||||| | | |||||||||| ||||    
T  9644361 tgaggagcctatggtggatagagcgaaactcttgggttggaagtggttcctagctaagtgtcctactagttcttgctcctttcatgaatgggaggt 9644456  T

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Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 251 - 348
Target Start/End: Original strand, 40799641 - 40799738
Alignment:
Q  251 tgaggagcatgtggtggatagagcaaagttcttagcttggaagtggttcctggctaagtgccctgctagttcttgcacttatcatgaatggaaggtgc 348  Q
    |||||||| ||||||||||||||  ||  |||| ||||| |||| |||||| |||||||||  ||||||||||||| ||| |||||| ||| ||||||    
T  40799641 tgaggagcctgtggtggatagagtgaaactcttggcttgaaagttgttcctagctaagtgcattgctagttcttgctcttttcatgagtgggaggtgc 40799738  T

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Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 251 - 348
Target Start/End: Complemental strand, 44504059 - 44503962
Alignment:
Q  251 tgaggagcatgtggtggatagagcaaagttcttagcttggaagtggttcctggctaagtgccctgctagttcttgcacttatcatgaatggaaggtgc 348  Q
    |||||||| ||||||||||| ||  ||| |||||||||||||||||||| || ||||||| | || |||||| ||| ||| |||||| ||| ||||||    
T  44504059 tgaggagcctgtggtggataaagtgaagctcttagcttggaagtggttcatgactaagtgtcgtggtagttcctgctcttttcatgagtgggaggtgc 44503962  T

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Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 280 - 322
Target Start/End: Complemental strand, 25410648 - 25410606
Alignment:
Q  280 tcttagcttggaagtggttcctggctaagtgccctgctagttc 322  Q
    |||||||||||||||||||||||||||||| || |||||||||    
T  25410648 tcttagcttggaagtggttcctggctaagtaccttgctagttc 25410606  T

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Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 320
Target Start/End: Complemental strand, 3227725 - 3227685
Alignment:
Q  280 tcttagcttggaagtggttcctggctaagtgccctgctagt 320  Q
    |||||||||| ||||| ||||||| ||||||||||||||||    
T  3227725 tcttagcttgaaagtgattcctggttaagtgccctgctagt 3227685  T

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Target: scaffold0329 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0329
Description:

Target: scaffold0329; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 256 - 348
Target Start/End: Complemental strand, 18525 - 18433
Alignment:
Q  256 agcatgtggtggatagagcaaagttcttagcttggaagtggttcctggctaagtgccctgctagttcttgcacttatcatgaatggaaggtgc 348  Q
    ||||||||||||||||||| ||  || ||| ||| ||||| |||  ||||||||||||||||||||| |||||||||||||| ||| ||||||    
T  18525 agcatgtggtggatagagcgaaactcatagtttgaaagtgattctgggctaagtgccctgctagttcctgcacttatcatgagtgggaggtgc 18433  T

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Target: scaffold0042 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 83293 - 83243
Alignment:
Q  280 tcttagcttggaagtggttcctggctaagtgccctgctagttcttgcactt 330  Q
    |||||||||||||||||||| || | ||||| |||||||||||||||||||    
T  83293 tcttagcttggaagtggttcatgccgaagtgtcctgctagttcttgcactt 83243  T

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