View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19121_high_9 (Length: 250)

Name: NF19121_high_9
Description: NF19121
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19121_high_9
NF19121_high_9
[»] chr6 (33 HSPs)
chr6 (11-250)||(29424414-29424649)
chr6 (95-208)||(17867925-17868038)
chr6 (95-208)||(17877708-17877821)
chr6 (92-246)||(15276860-15277015)
chr6 (95-246)||(3259734-3259886)
chr6 (95-246)||(7396052-7396203)
chr6 (95-197)||(11382163-11382265)
chr6 (95-197)||(32860152-32860254)
chr6 (95-246)||(24203413-24203565)
chr6 (98-184)||(9200316-9200402)
chr6 (95-246)||(166849-167001)
chr6 (95-246)||(10324037-10324189)
chr6 (95-246)||(10960051-10960203)
chr6 (95-208)||(3379800-3379913)
chr6 (95-195)||(3932733-3932833)
chr6 (95-246)||(15277206-15277358)
chr6 (95-246)||(32409778-32409930)
chr6 (95-165)||(3290792-3290862)
chr6 (95-193)||(34176935-34177033)
chr6 (95-168)||(14925143-14925216)
chr6 (95-246)||(2614947-2615099)
chr6 (95-167)||(11212388-11212460)
chr6 (95-167)||(11613717-11613789)
chr6 (144-246)||(18597133-18597236)
chr6 (144-246)||(32132355-32132458)
chr6 (95-161)||(14807944-14808010)
chr6 (95-165)||(31870023-31870093)
chr6 (92-197)||(9614075-9614180)
chr6 (95-184)||(18057633-18057722)
chr6 (139-196)||(27824623-27824680)
chr6 (173-246)||(34683989-34684061)
chr6 (95-246)||(11279179-11279331)
chr6 (95-167)||(14925382-14925454)
[»] chr2 (33 HSPs)
chr2 (95-246)||(42365628-42365780)
chr2 (95-246)||(7258948-7259100)
chr2 (95-246)||(9732817-9732969)
chr2 (95-246)||(35114836-35114988)
chr2 (95-246)||(44284680-44284832)
chr2 (95-197)||(32498016-32498118)
chr2 (95-246)||(3913347-3913499)
chr2 (95-246)||(7761460-7761612)
chr2 (95-246)||(32766391-32766543)
chr2 (95-246)||(33366661-33366813)
chr2 (95-197)||(5278722-5278823)
chr2 (95-197)||(33889344-33889446)
chr2 (95-197)||(34338911-34339013)
chr2 (95-208)||(18685926-18686039)
chr2 (95-246)||(37308706-37308859)
chr2 (95-167)||(16177770-16177842)
chr2 (92-167)||(18793177-18793252)
chr2 (96-167)||(37863254-37863325)
chr2 (95-197)||(30798376-30798477)
chr2 (95-197)||(40692398-40692500)
chr2 (95-192)||(2086169-2086265)
chr2 (95-246)||(6896219-6896371)
chr2 (95-167)||(9717332-9717404)
chr2 (101-217)||(15303133-15303249)
chr2 (95-194)||(2644974-2645073)
chr2 (144-246)||(27462738-27462841)
chr2 (95-246)||(30326219-30326370)
chr2 (108-246)||(42706410-42706549)
chr2 (95-184)||(83384-83473)
chr2 (95-167)||(28824444-28824516)
chr2 (95-167)||(37003778-37003850)
chr2 (95-125)||(1247258-1247288)
chr2 (99-246)||(40832360-40832508)
[»] chr4 (55 HSPs)
chr4 (95-246)||(50727793-50727945)
chr4 (95-246)||(50735807-50735959)
chr4 (99-246)||(38812574-38812722)
chr4 (95-246)||(3649690-3649842)
chr4 (95-246)||(22318264-22318416)
chr4 (95-246)||(36885986-36886138)
chr4 (95-197)||(4325895-4325997)
chr4 (139-217)||(43189687-43189765)
chr4 (95-246)||(2725013-2725165)
chr4 (95-167)||(2787098-2787170)
chr4 (95-167)||(14296701-14296773)
chr4 (95-167)||(14314949-14315021)
chr4 (95-246)||(33176912-33177064)
chr4 (95-246)||(33552722-33552874)
chr4 (95-246)||(38486137-38486289)
chr4 (107-197)||(31445768-31445860)
chr4 (95-167)||(2629831-2629903)
chr4 (95-246)||(12600940-12601092)
chr4 (95-246)||(20694425-20694577)
chr4 (95-246)||(23521934-23522086)
chr4 (95-246)||(50186582-50186734)
chr4 (95-185)||(42870087-42870177)
chr4 (95-197)||(46680390-46680492)
chr4 (92-184)||(47741386-47741479)
chr4 (95-246)||(24002393-24002545)
chr4 (95-167)||(29616300-29616372)
chr4 (95-167)||(32181397-32181469)
chr4 (95-246)||(50729422-50729574)
chr4 (95-246)||(52949774-52949926)
chr4 (92-246)||(28115306-28115460)
chr4 (95-197)||(29785416-29785519)
chr4 (95-193)||(39078769-39078867)
chr4 (114-246)||(21202793-21202926)
chr4 (95-192)||(25978492-25978588)
chr4 (95-246)||(47361293-47361445)
chr4 (99-246)||(55065217-55065365)
chr4 (95-167)||(1231445-1231517)
chr4 (95-246)||(6776632-6776784)
chr4 (95-167)||(9512220-9512292)
chr4 (95-246)||(21580080-21580231)
chr4 (95-246)||(24210373-24210525)
chr4 (95-167)||(36497351-36497423)
chr4 (107-246)||(37865807-37865947)
chr4 (94-182)||(43739557-43739645)
chr4 (95-167)||(44324222-44324294)
chr4 (122-193)||(45577595-45577667)
chr4 (92-246)||(9947983-9948138)
chr4 (95-245)||(11056097-11056248)
chr4 (95-193)||(20517901-20518000)
chr4 (105-246)||(42772842-42772984)
chr4 (95-193)||(50178372-50178470)
chr4 (95-246)||(55593939-55594092)
chr4 (95-167)||(23328030-23328102)
chr4 (95-246)||(44649044-44649196)
chr4 (95-163)||(54543127-54543194)
[»] chr7 (33 HSPs)
chr7 (95-208)||(3922591-3922704)
chr7 (95-246)||(21784926-21785078)
chr7 (95-246)||(10932445-10932597)
chr7 (95-246)||(43213813-43213965)
chr7 (95-246)||(44748750-44748902)
chr7 (95-246)||(11250672-11250824)
chr7 (95-197)||(26994113-26994215)
chr7 (106-246)||(21408526-21408666)
chr7 (95-246)||(43158574-43158726)
chr7 (95-197)||(18386629-18386731)
chr7 (95-185)||(46633809-46633899)
chr7 (95-196)||(16963244-16963345)
chr7 (95-246)||(47316586-47316738)
chr7 (95-246)||(47953245-47953397)
chr7 (92-246)||(1870190-1870345)
chr7 (95-197)||(40753260-40753362)
chr7 (95-246)||(11822278-11822430)
chr7 (95-246)||(43189130-43189282)
chr7 (95-161)||(15035139-15035205)
chr7 (95-193)||(26700586-26700684)
chr7 (95-246)||(38301397-38301550)
chr7 (95-246)||(11321773-11321925)
chr7 (95-246)||(30849134-30849286)
chr7 (95-246)||(36769457-36769609)
chr7 (95-246)||(41211088-41211240)
chr7 (95-167)||(43368336-43368408)
chr7 (145-246)||(329525-329627)
chr7 (95-161)||(17237217-17237283)
chr7 (95-197)||(26371697-26371799)
chr7 (96-193)||(18470791-18470888)
chr7 (139-238)||(2049014-2049114)
chr7 (95-246)||(29661378-29661529)
chr7 (95-167)||(48894852-48894924)
[»] scaffold0027 (1 HSPs)
scaffold0027 (95-246)||(15223-15375)
[»] chr8 (42 HSPs)
chr8 (95-246)||(30542924-30543076)
chr8 (95-246)||(8672957-8673109)
chr8 (95-245)||(39642935-39643086)
chr8 (95-208)||(10467154-10467267)
chr8 (95-246)||(4052531-4052683)
chr8 (95-246)||(14004946-14005098)
chr8 (95-246)||(34101559-34101711)
chr8 (95-197)||(25478344-25478446)
chr8 (95-197)||(34063229-34063331)
chr8 (95-246)||(7394716-7394868)
chr8 (95-246)||(12753227-12753379)
chr8 (95-246)||(31513485-31513637)
chr8 (99-246)||(17520646-17520793)
chr8 (106-248)||(10932785-10932927)
chr8 (89-194)||(13406831-13406936)
chr8 (106-246)||(16595063-16595203)
chr8 (95-192)||(41709883-41709980)
chr8 (95-208)||(45446545-45446658)
chr8 (95-246)||(3251558-3251710)
chr8 (99-246)||(5968770-5968918)
chr8 (95-246)||(29610957-29611109)
chr8 (95-246)||(30501196-30501348)
chr8 (96-164)||(42110695-42110763)
chr8 (95-167)||(45114186-45114258)
chr8 (95-193)||(22999363-22999461)
chr8 (95-197)||(27104060-27104162)
chr8 (95-193)||(37474805-37474903)
chr8 (95-197)||(40389141-40389243)
chr8 (99-193)||(41548723-41548817)
chr8 (146-246)||(54221-54322)
chr8 (95-246)||(10656588-10656740)
chr8 (95-246)||(15001517-15001669)
chr8 (95-167)||(32019903-32019975)
chr8 (95-246)||(37618294-37618446)
chr8 (95-163)||(38047481-38047549)
chr8 (153-207)||(6460345-6460399)
chr8 (146-246)||(22756364-22756465)
chr8 (95-246)||(29672224-29672377)
chr8 (95-246)||(37664184-37664337)
chr8 (148-184)||(5892182-5892218)
chr8 (95-167)||(6386707-6386779)
chr8 (139-246)||(10320225-10320331)
[»] chr5 (27 HSPs)
chr5 (95-246)||(31770484-31770636)
chr5 (95-246)||(32528766-32528918)
chr5 (95-246)||(39918558-39918710)
chr5 (95-246)||(4689591-4689743)
chr5 (95-246)||(27838967-27839118)
chr5 (95-206)||(41459680-41459791)
chr5 (95-246)||(7770172-7770324)
chr5 (95-246)||(11963392-11963544)
chr5 (95-246)||(35701328-35701480)
chr5 (95-197)||(24181517-24181619)
chr5 (95-167)||(2351811-2351883)
chr5 (95-246)||(8136888-8137040)
chr5 (95-246)||(18470321-18470473)
chr5 (95-246)||(553448-553600)
chr5 (95-246)||(3735408-3735560)
chr5 (95-246)||(7523223-7523375)
chr5 (95-197)||(29241479-29241581)
chr5 (95-193)||(31879969-31880067)
chr5 (95-197)||(40489438-40489539)
chr5 (95-208)||(8560875-8560988)
chr5 (105-217)||(17031238-17031350)
chr5 (95-246)||(23091197-23091349)
chr5 (95-246)||(34794938-34795090)
chr5 (95-246)||(39788244-39788396)
chr5 (92-167)||(7208120-7208195)
chr5 (95-197)||(37148482-37148584)
chr5 (95-184)||(11090762-11090850)
[»] scaffold0077 (1 HSPs)
scaffold0077 (92-241)||(7348-7498)
[»] chr3 (36 HSPs)
chr3 (95-197)||(3695188-3695290)
chr3 (95-246)||(29584927-29585079)
chr3 (97-246)||(44000313-44000462)
chr3 (95-197)||(51259661-51259763)
chr3 (95-246)||(24571333-24571485)
chr3 (95-167)||(26847459-26847531)
chr3 (95-194)||(20255149-20255248)
chr3 (95-197)||(5442381-5442483)
chr3 (95-197)||(12349052-12349154)
chr3 (92-197)||(42636281-42636386)
chr3 (92-197)||(53557673-53557778)
chr3 (95-246)||(39052719-39052871)
chr3 (95-246)||(40094555-40094707)
chr3 (92-246)||(29646118-29646273)
chr3 (95-197)||(1344588-1344690)
chr3 (95-197)||(2135172-2135274)
chr3 (95-197)||(22484624-22484726)
chr3 (95-197)||(25927208-25927310)
chr3 (95-193)||(31882903-31883001)
chr3 (95-193)||(50386337-50386435)
chr3 (95-246)||(21221242-21221393)
chr3 (99-246)||(34026719-34026867)
chr3 (95-246)||(51925089-51925241)
chr3 (105-246)||(25860312-25860454)
chr3 (95-193)||(33364659-33364757)
chr3 (95-197)||(44117041-44117143)
chr3 (95-208)||(41682934-41683047)
chr3 (95-246)||(21373982-21374134)
chr3 (99-167)||(24721617-24721685)
chr3 (95-246)||(28675842-28675994)
chr3 (95-246)||(49748792-49748944)
chr3 (92-181)||(25395733-25395821)
chr3 (92-125)||(54622675-54622708)
chr3 (95-246)||(3964340-3964492)
chr3 (95-163)||(43175611-43175679)
chr3 (95-246)||(51296633-51296783)
[»] chr1 (47 HSPs)
chr1 (95-246)||(51264555-51264707)
chr1 (95-197)||(24339600-24339702)
chr1 (99-185)||(47242482-47242568)
chr1 (95-246)||(1351397-1351549)
chr1 (97-197)||(26118179-26118279)
chr1 (95-246)||(32289306-32289458)
chr1 (95-246)||(35387273-35387425)
chr1 (92-246)||(17888008-17888163)
chr1 (95-197)||(41973021-41973123)
chr1 (95-208)||(49303316-49303429)
chr1 (95-246)||(844686-844838)
chr1 (95-246)||(6711008-6711160)
chr1 (95-246)||(16451187-16451339)
chr1 (95-246)||(32270413-32270565)
chr1 (144-246)||(6029312-6029415)
chr1 (95-197)||(17327611-17327713)
chr1 (95-197)||(42510635-42510737)
chr1 (95-161)||(46155053-46155119)
chr1 (95-197)||(50540454-50540556)
chr1 (95-208)||(28340266-28340378)
chr1 (95-246)||(26764757-26764909)
chr1 (95-246)||(42705199-42705352)
chr1 (95-246)||(45490837-45490989)
chr1 (126-217)||(4895451-4895542)
chr1 (95-185)||(8839019-8839109)
chr1 (95-193)||(42512732-42512830)
chr1 (95-197)||(44738004-44738106)
chr1 (95-193)||(50304765-50304863)
chr1 (108-217)||(16704816-16704925)
chr1 (139-246)||(2761562-2761670)
chr1 (95-167)||(11772594-11772666)
chr1 (95-246)||(17291639-17291790)
chr1 (95-246)||(31004192-31004344)
chr1 (95-167)||(38663247-38663319)
chr1 (146-197)||(6143999-6144050)
chr1 (144-246)||(13994086-13994189)
chr1 (92-246)||(16437422-16437577)
chr1 (95-194)||(21071727-21071826)
chr1 (141-246)||(3560158-3560264)
chr1 (105-167)||(40856280-40856342)
chr1 (95-246)||(41967810-41967963)
chr1 (103-175)||(7146892-7146964)
chr1 (95-167)||(15539852-15539924)
chr1 (95-246)||(16386914-16387065)
chr1 (95-167)||(39282034-39282106)
chr1 (95-167)||(40811333-40811405)
chr1 (95-167)||(45658961-45659033)
[»] scaffold0957 (1 HSPs)
scaffold0957 (95-167)||(2389-2461)
[»] scaffold0054 (1 HSPs)
scaffold0054 (95-246)||(23626-23778)
[»] scaffold0014 (1 HSPs)
scaffold0014 (95-167)||(102080-102152)
[»] scaffold0650 (1 HSPs)
scaffold0650 (144-246)||(1585-1688)
[»] scaffold0360 (1 HSPs)
scaffold0360 (95-202)||(15266-15373)
[»] scaffold0729 (1 HSPs)
scaffold0729 (95-246)||(4472-4624)
[»] scaffold0169 (1 HSPs)
scaffold0169 (144-246)||(17996-18099)
[»] scaffold0050 (1 HSPs)
scaffold0050 (144-246)||(42892-42995)
[»] scaffold0062 (1 HSPs)
scaffold0062 (145-246)||(3565-3669)
[»] scaffold0098 (1 HSPs)
scaffold0098 (95-167)||(51569-51641)


Alignment Details
Target: chr6 (Bit Score: 161; Significance: 6e-86; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 11 - 250
Target Start/End: Original strand, 29424414 - 29424649
Alignment:
Q  11 cacagatgcacttgttagttttacaagtaagtgtgtttaatgatgactcatgannnnnnnnnnactctaatacatcaaaaagcatttgatttgctaaaaa 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||| |||    
T  29424414 cacagatgcacttgttagttttacaagtaagtgtgtttaatgatgactcatgattttttttttactctaatacatcaaaaagcatttgatttgctagaaa 29424513  T
Q  111 ataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagggaccagataaaaacat 210  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||||||      || |||||||||||    
T  29424514 ataaaggacatgacatgacaactctaattctatagtgttttatttgtaaaattgtttttgagacatgacaaactgaaggc----cccccgataaaaacat 29424609  T
Q  211 aaattttgtccatcactaaacgacaacacaacttttagac 250  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  29424610 aaattttgtccatcactaaacgacaacacaatttttagac 29424649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 95 - 208
Target Start/End: Complemental strand, 17868038 - 17867925
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||| ||||  ||||||||| ||||  ||||||| ||||||||||||||||  |  ||| ||||||||| ||||||||    
T  17868038 tttgatttgctaaaaaatgaaggacaggacagaacaactctagctgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagg 17867939  T
Q  195 gaccagataaaaac 208  Q
    ||| ||||||||||    
T  17867938 gacaagataaaaac 17867925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 95 - 208
Target Start/End: Complemental strand, 17877821 - 17877708
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||| ||||  ||||||||| ||||  ||||||| ||||||||||||||||  |  ||| ||||||||| ||||||||    
T  17877821 tttgatttgctaaaaaatgaaggacaggacagaacaactctagctgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagg 17877722  T
Q  195 gaccagataaaaac 208  Q
    ||| ||||||||||    
T  17877721 gacaagataaaaac 17877708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 92 - 246
Target Start/End: Original strand, 15276860 - 15277015
Alignment:
Q  92 gcatttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggca 191  Q
    ||||||||||||||||||||| ||||||||||||  |||||||||  ||| || ||||| ||||||||||||||||  |  ||| ||||||||| |||||    
T  15276860 gcatttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtctaatgtttgatttgtaaaactgtttcaggtacaggacaaactggaggca 15276959  T
Q  192 agggaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    ||||||  || ||||||  | | |||||||| |||| |||| ||| ||||||||||    
T  15276960 agggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttt 15277015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 95 - 246
Target Start/End: Complemental strand, 3259886 - 3259734
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||||||||  |||||||||  |||  ||||||| ||||||||||||||||  |  ||| ||||||||| |||||||     
T  3259886 tttgatttgctaaaaaatgaaggacatgacaaaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaga 3259787  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||||| |||| |||| ||||||||||||||    
T  3259786 gacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttt 3259734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 95 - 246
Target Start/End: Original strand, 7396052 - 7396203
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    ||||||||||||| |||| ||||||||||||  |||| |  |  ||||| |||||| ||||||||| |||||| || |||||||||| ||| | |||| |    
T  7396052 tttgatttgctaagaaatgaaggacatgacaaaacaatttcagttgtatggtgtttgatttgtaaagctgtttctgggacatgacaagctggaagcaatg 7396151  T
Q  195 gaccagataaaaacataaattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||| |||| |||||| ||||||||| || |||||||||||    
T  7396152 gacaggacaaaaacagaaatcttgtccctcactaaaccactacacaactttt 7396203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 95 - 197
Target Start/End: Complemental strand, 11382265 - 11382163
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||||||||  |||||||||  |||  ||||||| ||||||||||||||||  |  ||| ||||||||| ||||||||    
T  11382265 tttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtccagtgtttaatttgtaaaactgtttcaggtacaggacaaactggaggcaagg 11382166  T
Q  195 gac 197  Q
    |||    
T  11382165 gac 11382163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 95 - 197
Target Start/End: Complemental strand, 32860254 - 32860152
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    ||||||||| |||||||| ||||||||||||  ||||||| || |||  ||||||| ||||||||||| ||||  | |||||||||||||| ||||||||    
T  32860254 tttgatttgataaaaaatgaaggacatgacaaaacaactccaattgtccagtgtttgatttgtaaaacagtttcagggacatgacaaactggaggcaagg 32860155  T
Q  195 gac 197  Q
    |||    
T  32860154 gac 32860152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 95 - 246
Target Start/End: Complemental strand, 24203565 - 24203413
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||||||||  |||||| ||  |||  ||||||| ||||||||||||||||| |  ||| ||||||||| |||||||     
T  24203565 tttgatttgctaaaaaatgaaggacatgacagaacaactatagttgtccagtgtttgatttgtaaaactgttttaggtacaggacaaactggaggcaaga 24203466  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||||| |||| |||| ||| ||||||||||    
T  24203465 gacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttt 24203413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 184
Target Start/End: Original strand, 9200316 - 9200402
Alignment:
Q  98 gatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaact 184  Q
    ||||||||||||| | ||||||| ||||||||||||| |  |||| | ||||| |||||||||||||||||  ||||||||||||||    
T  9200316 gatttgctaaaaagttaaggacaagacatgacaactcaagttgtacaatgtttgatttgtaaaactgttttaaagacatgacaaact 9200402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 246
Target Start/End: Original strand, 166849 - 167001
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||| ||||||  |||||||||  |||  ||||||| ||||||||||||||||  |  ||| ||||||||  ||||||||    
T  166849 tttgatttgctaaaaaatgaaggatatgacagaacaactctacttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactagaggcaagg 166948  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||   | ||||||  | | |||||||| |||| |||| ||||||||||||||    
T  166949 gacataacaaaaactcatatttttgtccctcaccaaaccacaacacaactttt 167001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 246
Target Start/End: Original strand, 10324037 - 10324189
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| |||||||  |||  |||||||||  |||  ||||||| ||||||||||||||||  |  ||| ||||||||  ||||||||    
T  10324037 tttgatttgctaaaaaatgaaggacagaacagaacaactctagttgttcagtgtttaatttgtaaaactgtttcaggtacaggacaaactagaggcaagg 10324136  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||||| |||| |||| ||||||||||||||    
T  10324137 gacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttt 10324189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 246
Target Start/End: Complemental strand, 10960203 - 10960051
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||| | ||||  ||||||| |  |||  ||||||| ||||||||||||||||  |  ||| ||||||||||||||||||    
T  10960203 tttgatttgctaaaaaatgaaggataggacagaacaactccagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactgaaggcaagg 10960104  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||||| |||  |||| ||||||||||||||    
T  10960103 gacaggacaaaaactcatatttttgtccctcaacaaaccacaacacaactttt 10960051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 208
Target Start/End: Complemental strand, 3379913 - 3379800
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| |||||||||| |  |||||| ||  |||  ||||||| |||| |||||||||||  || ||| ||||||||| |||||||     
T  3379913 tttgatttgctaaaaaatgaaggacatgatagaacaactttagttgtccagtgtttgatttataaaactgtttcagatacaggacaaactggaggcaaga 3379814  T
Q  195 gaccagataaaaac 208  Q
    ||| ||| ||||||    
T  3379813 gacaagacaaaaac 3379800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 95 - 195
Target Start/End: Original strand, 3932733 - 3932833
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||| ||||  |||| ||||  |||  ||||||| ||||||||||||||||  |  ||| ||||||||| ||||||||    
T  3932733 tttgatttgctaaaaaatgaaggacaggacagaacaattctagttgttcagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagg 3932832  T
Q  195 g 195  Q
    |    
T  3932833 g 3932833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 95 - 246
Target Start/End: Original strand, 15277206 - 15277358
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| || |||| ||||  |||||||||  |||  ||||||| |||||||||| |||||  |  ||| ||||||||| ||||||||    
T  15277206 tttgatttgctaaaaaatgaaagacaagacaaaacaactctatttgtccagtgtttgatttgtaaaattgtttaaggtacaggacaaactggaggcaagg 15277305  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||||| |||| |||| ||| ||||||||||    
T  15277306 gacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttt 15277358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 95 - 246
Target Start/End: Original strand, 32409778 - 32409930
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||||||||  | |||||||  | |  ||||||| ||||||||||||||||  |  ||| ||||||||| || |||||    
T  32409778 tttgatttgctaaaaaatgaaggacatgacagaataactctagttatccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagacaagg 32409877  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||||| |||| |||| ||| ||||||||||    
T  32409878 gacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttt 32409930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 95 - 165
Target Start/End: Complemental strand, 3290862 - 3290792
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgt 165  Q
    |||||||||||||||||| ||||||||||||  |||||||||  |||  ||||||| ||||||| ||||||    
T  3290862 tttgatttgctaaaaaatgaaggacatgacagaacaactctagttgttcagtgtttgatttgtataactgt 3290792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 95 - 193
Target Start/End: Complemental strand, 34177033 - 34176935
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaag 193  Q
    |||||||||||||||||| ||||||| ||||  |||||||||  |||    ||||| ||||||||||||||||  |  ||||||||||||| |||||||    
T  34177033 tttgatttgctaaaaaatgaaggacaagacagaacaactctagttgtcacttgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaag 34176935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 168
Target Start/End: Original strand, 14925143 - 14925216
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttt 168  Q
    |||||||||||||||||| ||||||| ||||||||||||  |  |||  ||||||| |||||||||| ||||||    
T  14925143 tttgatttgctaaaaaatgaaggacaggacatgacaacttcagttgtccagtgtttgatttgtaaaattgtttt 14925216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 246
Target Start/End: Complemental strand, 2615099 - 2614947
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||| ||||  |||||||||  |||  | ||||| |||||||||| |||||  |  ||| |||||| || ||||||||    
T  2615099 tttgatttgctaaaaaatgaaggacaagacagaacaactctagttgtccactgtttgatttgtaaaattgtttcaggtacaggacaaattggaggcaagg 2615000  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||||| |||| |||| ||| ||||||||||    
T  2614999 gacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttt 2614947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 167
Target Start/End: Complemental strand, 11212460 - 11212388
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgttt 167  Q
    |||||||||||||||||| ||||||  ||||  |||||||||  |||  ||||||| ||||||||||||||||    
T  11212460 tttgatttgctaaaaaatgaaggacgggacagaacaactctagttgtccagtgtttgatttgtaaaactgttt 11212388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 167
Target Start/End: Original strand, 11613717 - 11613789
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgttt 167  Q
    |||||||||||||||||| ||||||| ||||  |||||| ||  |||  ||||||| ||||||||||||||||    
T  11613717 tttgatttgctaaaaaatgaaggacaggacagaacaactttagttgtccagtgtttgatttgtaaaactgttt 11613789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 246
Target Start/End: Original strand, 18597133 - 18597236
Alignment:
Q  144 agtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagggaccagataaaaacataaa-ttttgtccatcactaaacgacaacacaac 242  Q
    ||||||| ||||||||||||||||  | || ||||||||| | |||||||||||  || |||| |  ||| |||||||| |||| |||| ||||||||||    
T  18597133 agtgtttgatttgtaaaactgtttcagggatatgacaaaccggaggcaagggacatgacaaaatctgaaatttttgtccctcaccaaaccacaacacaac 18597232  T
Q  243 tttt 246  Q
    ||||    
T  18597233 tttt 18597236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 246
Target Start/End: Original strand, 32132355 - 32132458
Alignment:
Q  144 agtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagggaccagataaaaacata-aattttgtccatcactaaacgacaacacaac 242  Q
    ||||||| ||||||||||||||||| |  ||| ||||||||| |||||||||||  || ||||||  | | |||||||| |||| || | ||||||||||    
T  32132355 agtgtttgatttgtaaaactgttttaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaatccacaacacaac 32132454  T
Q  243 tttt 246  Q
    ||||    
T  32132455 tttt 32132458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 161
Target Start/End: Original strand, 14807944 - 14808010
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaa 161  Q
    |||||||||||||||||| ||||||||||||  ||||||| |  |||  ||||||| ||||||||||    
T  14807944 tttgatttgctaaaaaatgaaggacatgacagaacaactccagttgtccagtgtttgatttgtaaaa 14808010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 165
Target Start/End: Original strand, 31870023 - 31870093
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgt 165  Q
    |||||||||||||||||| ||||||  ||||| ||||||| |  |||  ||||||| ||||||||||||||    
T  31870023 tttgatttgctaaaaaatgaaggactggacataacaactccagttgtccagtgtttgatttgtaaaactgt 31870093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 197
Target Start/End: Complemental strand, 9614180 - 9614075
Alignment:
Q  92 gcatttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggca 191  Q
    ||||||||| ||||||||||| |||||||| ||| || ||||  |  |||| | ||||| ||||||||||||||||    |||| || |||||| |||||    
T  9614180 gcatttgatctgctaaaaaatgaaggacataacaagaaaacttcagttgtacaatgtttgatttgtaaaactgtttcaaggacaggataaactggaggca 9614081  T
Q  192 agggac 197  Q
    ||||||    
T  9614080 agggac 9614075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 184
Target Start/End: Complemental strand, 18057722 - 18057633
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaact 184  Q
    ||||||| |||||||||| ||||||| || | |||||||  || |||  | ||||| ||||||||||||||||  || ||||||||||||    
T  18057722 tttgattcgctaaaaaatgaaggacaggataggacaacttcaattgtccaatgtttgatttgtaaaactgtttgagatacatgacaaact 18057633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 196
Target Start/End: Original strand, 27824623 - 27824680
Alignment:
Q  139 tgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaaggga 196  Q
    |||| ||||||| ||||||||||||||||||| || | ||||||||  ||||||||||    
T  27824623 tgtacagtgtttgatttgtaaaactgtttttgggaaaggacaaactagaggcaaggga 27824680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 246
Target Start/End: Original strand, 34683989 - 34684061
Alignment:
Q  173 acatgacaaactgaaggcaagggaccagataaaaacataaattttgtccatcactaaacgacaacacaactttt 246  Q
    ||||||||||||| |||||||||||  || |||||| | | |||||||| |||| |||| ||||||||||||||    
T  34683989 acatgacaaactggaggcaagggacacgacaaaaac-tcatttttgtccctcaccaaaccacaacacaactttt 34684061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 246
Target Start/End: Complemental strand, 11279331 - 11279179
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| || |||  ||||  ||||||| |  |||  ||||||| ||||||||||||||||     ||| ||||||||| ||||| ||    
T  11279331 tttgatttgctaaaaaatgaaagacgggacagaacaactccagttgtccagtgtttgatttgtaaaactgtttcaagtacaggacaaactggaggcatgg 11279232  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||||| |||| |||| ||||||||||||||    
T  11279231 gacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttt 11279179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 167
Target Start/End: Original strand, 14925382 - 14925454
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgttt 167  Q
    ||||||| | |||||||| ||||||| ||||||||||||  |  |||  ||||||| ||||||||||||||||    
T  14925382 tttgattcgttaaaaaatgaaggacaggacatgacaacttcagttgtccagtgtttgatttgtaaaactgttt 14925454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 3e-26; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 95 - 246
Target Start/End: Complemental strand, 42365780 - 42365628
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||||||||| |||||||||  ||| |||||||| ||||||||||| ||||  |  ||||||||||||| ||||||||    
T  42365780 tttgatttgctaaaaaatgaaggacatgacataacaactctagttgtctagtgtttgatttgtaaaaccgtttcaggtacatgacaaactggaggcaagg 42365681  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    ||| ||| ||||||  | | |||||||| |||  |||| ||||||||||||||    
T  42365680 gacaagacaaaaactcatatttttgtccttcatcaaaccacaacacaactttt 42365628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 95 - 246
Target Start/End: Complemental strand, 7259100 - 7258948
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    ||||||||| |||||||| ||||||||||||  ||||||||| |||| |||||||| ||||||||||||||||  |  ||| ||||||||| ||||||||    
T  7259100 tttgatttgttaaaaaatgaaggacatgacagaacaactctagctgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagg 7259001  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||||| |||| |||| ||| ||||||||||    
T  7259000 gacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttt 7258948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 95 - 246
Target Start/End: Original strand, 9732817 - 9732969
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    ||||||||| |||||||| ||||||| ||||  |||||||||  |||  ||||||| ||||||||||||||||  |  ||| ||||||||| ||||||||    
T  9732817 tttgatttgttaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagg 9732916  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    ||| ||| ||||||  | | |||||||| |||| |||| ||||||||||||||    
T  9732917 gacaagacaaaaactcatatttttgtccctcaccaaaccacaacacaactttt 9732969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 95 - 246
Target Start/End: Complemental strand, 35114988 - 35114836
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||| |||| ||||||||||  ||| |||||||| ||||||||||||||||  |  ||| ||||||||  ||||||||    
T  35114988 tttgatttgctaaaaaatgaaggacaagacaggacaactctagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactagaggcaagg 35114889  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||||| |||| |||| ||||||||| ||||    
T  35114888 gacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaattttt 35114836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 95 - 246
Target Start/End: Complemental strand, 44284832 - 44284680
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||||||||  ||||||  |  |||  ||||||| ||||||||||||||||  |  ||| ||||||||| ||||||||    
T  44284832 tttgatttgctaaaaaatgaaggacatgacagaacaactagagttgttcagtgtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaagg 44284733  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    ||| ||| ||||||  | | |||||||| ||||||||| ||| ||||||||||    
T  44284732 gacaagacaaaaactcatatttttgtccctcactaaaccacagcacaactttt 44284680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 95 - 197
Target Start/End: Complemental strand, 32498118 - 32498016
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| |||| |||| ||  |||||||||  |||  ||||||| ||||||||||||||||  |  ||||||||||||||||||||||    
T  32498118 tttgatttgctaaaaaatgaagggcatggcagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaactgaaggcaagg 32498019  T
Q  195 gac 197  Q
    |||    
T  32498018 gac 32498016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 95 - 246
Target Start/End: Original strand, 3913347 - 3913499
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||||||||||||||||  |||| ||||  |||  ||||||| ||||||||||||||||  |  | ||||||||||| |||||||     
T  3913347 tttgatttgctaaaaaataaaggacatgacaaaacaattctagttgtccagtgtttgatttgtaaaactgtttcaggtatatgacaaactggaggcaaga 3913446  T
Q  195 gaccagataaaaacataaat-tttgtccatcactaaacgacaacacaactttt 246  Q
     ||  || ||||||  | || ||||||| |||| |||| ||||||||||||||    
T  3913447 aacaggacaaaaactcacatgtttgtccctcaccaaaccacaacacaactttt 3913499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 95 - 246
Target Start/End: Original strand, 7761460 - 7761612
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||| ||||  |||||||||  |||  ||||||| ||||||||||||||||  |  ||||||||||||  ||||||||    
T  7761460 tttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaactagaggcaagg 7761559  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||||| |||| |||| ||| ||||||||||    
T  7761560 gacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttt 7761612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 95 - 246
Target Start/End: Original strand, 32766391 - 32766543
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||  |||||||  |||  |||||| ||| |||  ||||||| ||||||||||||||||  |  ||||||||||||| ||||||||    
T  32766391 tttgatttgctaaaaaacgaaggacagaacagaacaactataattgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaagg 32766490  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||||| |||| |||| ||||||||||||||    
T  32766491 gacaggacaaaaactgatatttttgtccctcaccaaaccacaacacaactttt 32766543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 95 - 246
Target Start/End: Complemental strand, 33366813 - 33366661
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||| ||||||  |||| ||||| |||  ||||||| ||||||||||||||||  |  ||| ||||||||| ||||||||    
T  33366813 tttgatttgctaaaaaatgaaggatatgacagaacaattctaattgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagg 33366714  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||| | |||| |||| ||||||||||||||    
T  33366713 gacaggacaaaaactcatatttttgttcctcaccaaaccacaacacaactttt 33366661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 197
Target Start/End: Original strand, 5278722 - 5278823
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||||| ||| ||||||  |||||||||| |||   |||||| ||||||||||||||||  |  ||||||||||||| ||||||||    
T  5278722 tttgatttgctaaaaaataa-ggatatgacagaacaactctaattgttaggtgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaagg 5278820  T
Q  195 gac 197  Q
    |||    
T  5278821 gac 5278823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 197
Target Start/End: Complemental strand, 33889446 - 33889344
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||| ||||||||| ||||||| ||||  |||||||||  ||| |||||||| |||||||||| |||||  || ||| ||||||||| ||||||||    
T  33889446 tttgatttactaaaaaatgaaggacaggacagaacaactctagttgtctagtgtttgatttgtaaaattgtttcagatacaggacaaactggaggcaagg 33889347  T
Q  195 gac 197  Q
    |||    
T  33889346 gac 33889344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 197
Target Start/End: Complemental strand, 34339013 - 34338911
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||| ||||  |||||||||  |||  ||||||| ||||||||||||||||  |  ||| ||||||||| ||||||||    
T  34339013 tttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagg 34338914  T
Q  195 gac 197  Q
    |||    
T  34338913 gac 34338911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 95 - 208
Target Start/End: Complemental strand, 18686039 - 18685926
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||||||||  | |||||||  |||  ||||||| ||||||||||||||||  |  ||| ||||||||| |||||| |    
T  18686039 tttgatttgctaaaaaatgaaggacatgacagaataactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaag 18685940  T
Q  195 gaccagataaaaac 208  Q
    ||| ||| ||||||    
T  18685939 gacaagacaaaaac 18685926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 95 - 246
Target Start/End: Complemental strand, 37308859 - 37308706
Alignment:
Q  95 tttgatttgctaaaaaa-taaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaag 193  Q
    ||||||||||||||||| | ||||||| ||||  |||||||||  |||  ||||||| ||||||||||||||||  |  ||| ||||||||| |||||||    
T  37308859 tttgatttgctaaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 37308760  T
Q  194 ggaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    ||||  || ||||||  | | |||||||| |||| |||| ||||||||||||||    
T  37308759 ggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttt 37308706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 167
Target Start/End: Original strand, 16177770 - 16177842
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgttt 167  Q
    |||||||||||||||||| ||||| ||||||| ||||||| || |||  ||||||| ||||||||||||||||    
T  16177770 tttgatttgctaaaaaatgaaggatatgacataacaactccaattgtccagtgtttgatttgtaaaactgttt 16177842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 18793177 - 18793252
Alignment:
Q  92 gcatttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgttt 167  Q
    ||||||||||||||||||||| ||||||||||||  |||||||||  ||   ||||||| ||||||||||||||||    
T  18793177 gcatttgatttgctaaaaaatgaaggacatgacagaacaactctagttgctcagtgtttgatttgtaaaactgttt 18793252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 96 - 167
Target Start/End: Original strand, 37863254 - 37863325
Alignment:
Q  96 ttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgttt 167  Q
    ||||||||||||||||| ||||||||||||  |||||||||  |||  ||||||| ||||||||||||||||    
T  37863254 ttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtccagtgtttgatttgtaaaactgttt 37863325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 197
Target Start/End: Original strand, 30798376 - 30798477
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| |||| || ||||  |||||||||  |||  ||||||| ||||||||||||||||  |  ||||||||||||| ||||||||    
T  30798376 tttgatttgctaaaaaatgaagggca-gacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaagg 30798474  T
Q  195 gac 197  Q
    |||    
T  30798475 gac 30798477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 197
Target Start/End: Complemental strand, 40692500 - 40692398
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||| ||||  |||||||||  |||  ||||||| |||||| |||||||||| |  ||| ||||||||| || |||||    
T  40692500 tttgatttgctaaaaaatgaaggacaagacagaacaactctagttgtccagtgtttaatttgtgaaactgttttaggtacaagacaaactggagacaagg 40692401  T
Q  195 gac 197  Q
    |||    
T  40692400 gac 40692398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 192
Target Start/End: Complemental strand, 2086265 - 2086169
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaa 192  Q
    |||||||||||||||||| ||||||| |||| ||||||||||  |||  ||||||| ||||||||||||||||  |  ||| ||||||||| ||||||    
T  2086265 tttgatttgctaaaaaatgaaggacaagaca-gacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaa 2086169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 95 - 246
Target Start/End: Complemental strand, 6896371 - 6896219
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    ||||||||| |||||||| || |||| ||||  ||||||  |  |||  ||||||| ||||||||||||||||  | ||||  |||||||| ||||||||    
T  6896371 tttgatttgttaaaaaatgaaagacaggacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcagggacaaaacaaactggaggcaagg 6896272  T
Q  195 gaccagataaaaacataaa-ttttgtccatcactaaacgacaacacaactttt 246  Q
    |||  |||||||||  ||| |||||||| |||| |||| ||| ||||||||||    
T  6896271 gacaggataaaaactgaaatttttgtccctcaccaaacaacagcacaactttt 6896219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 95 - 167
Target Start/End: Complemental strand, 9717404 - 9717332
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgttt 167  Q
    |||||||||||||||||| ||||||| ||||  |||||||||  |||  ||||||| ||||||||||||||||    
T  9717404 tttgatttgctaaaaaatgaaggacaggacagaacaactctagttgttcagtgtttgatttgtaaaactgttt 9717332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 101 - 217
Target Start/End: Original strand, 15303133 - 15303249
Alignment:
Q  101 ttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagggaccag 200  Q
    |||||||||||||||||| |||||| ||||| |  || | |||||| ||| ||||||||||||| ||  |||||| ||||||||  |||||||  ||  |    
T  15303133 ttgctaaaaaataaaggatatgacaagacaatttaaattatatagtatttgatttgtaaaactgcttcagagacaggacaaactagaggcaagacacatg 15303232  T
Q  201 ataaaaacataaatttt 217  Q
    | |||||||||||||||    
T  15303233 acaaaaacataaatttt 15303249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 194
Target Start/End: Original strand, 2644974 - 2645073
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||| || |  |||||||||  |||  ||||||| ||||||||||||||||  |  ||| ||||||||| ||||||||    
T  2644974 tttgatttgctaaaaaatgaaggacaggatagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagg 2645073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 246
Target Start/End: Original strand, 27462738 - 27462841
Alignment:
Q  144 agtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagggaccagataaaaac-ataaattttgtccatcactaaacgacaacacaac 242  Q
    ||||||| ||||||||||||||||| |  ||||||||||||| || |||||||| ||| |||| |  | | |||||||| |||| |||| ||||||||||    
T  27462738 agtgtttgatttgtaaaactgttttaggtacatgacaaactgtagacaagggacaagacaaaagctgttatttttgtccctcaccaaaccacaacacaac 27462837  T
Q  243 tttt 246  Q
    ||||    
T  27462838 tttt 27462841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 246
Target Start/End: Original strand, 30326219 - 30326370
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||| ||||   ||||||||  |||  ||||||| ||||||||||||||||  |  ||| ||||||||| ||||| ||    
T  30326219 tttgatttgctaaaaaatgaaggacaggacagagcaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaggg 30326318  T
Q  195 gaccagataaaaacataaattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | ||||||||  || | |||| ||| ||||||||||    
T  30326319 gacaggacaaaaactcatattttgtctctcgccaaaccacagcacaactttt 30326370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 246
Target Start/End: Complemental strand, 42706549 - 42706410
Alignment:
Q  108 aaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagggaccagataaaaa 207  Q
    ||||||||||||| ||||  |||| ||||  |||  ||||||| ||||||||||||||||  |  ||| ||||||||| ||||||||||  ||| |||||    
T  42706549 aaaataaaggacaggacagaacaattctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggataagacaaaaa 42706450  T
Q  208 cata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |  | | |||||||| |||| |||| ||||||||||||||    
T  42706449 ctcatatttttgtccctcaccaaaccacaacacaactttt 42706410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 184
Target Start/End: Complemental strand, 83473 - 83384
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaact 184  Q
    |||||| || |||||||  |||||||||||| |||||||  |  || | ||||||| |||||||||||||||| || |||||||||||||    
T  83473 tttgatctgttaaaaaacgaaggacatgacaagacaacttcagttgcacagtgtttgatttgtaaaactgtttgtgggacatgacaaact 83384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 167
Target Start/End: Original strand, 28824444 - 28824516
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgttt 167  Q
    |||||||||||||||||| ||||||||||||  ||||||  |  |||  ||||||| ||||||||||||||||    
T  28824444 tttgatttgctaaaaaatgaaggacatgacagaacaacttcagttgtccagtgtttgatttgtaaaactgttt 28824516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 167
Target Start/End: Original strand, 37003778 - 37003850
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgttt 167  Q
    |||||||||||||||||| ||||||| ||||| ||||||| |  |||  ||||||| ||||||||| ||||||    
T  37003778 tttgatttgctaaaaaatgaaggacaggacataacaactcaagttgtccagtgtttgatttgtaaatctgttt 37003850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 125
Target Start/End: Complemental strand, 1247288 - 1247258
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgaca 125  Q
    |||||||||||||||||||||||||||||||    
T  1247288 tttgatttgctaaaaaataaaggacatgaca 1247258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 246
Target Start/End: Original strand, 40832360 - 40832508
Alignment:
Q  99 atttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagggacc 198  Q
    |||||||||||||  ||| ||||||||| ||||||  |  |||  ||||||| ||||||||| || |||  |  ||| ||||||||| |||||||||||     
T  40832360 atttgctaaaaaaggaagcacatgacataacaacttaagttgtccagtgtttgatttgtaaagctatttcaggtacaagacaaactggaggcaagggaca 40832459  T
Q  199 agataaaaacataaatttt-gtccatcactaaacgacaacacaactttt 246  Q
     || ||||||  | ||||| |||| |||| |||| ||||||||||||||    
T  40832460 ggacaaaaacggatatttttgtccctcaccaaaccacaacacaactttt 40832508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 7e-24; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 95 - 246
Target Start/End: Original strand, 50727793 - 50727945
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||||||||  |||||||||  |||  ||||||| ||||||||||||||||  |  ||||||||||||||||||||||    
T  50727793 tttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtcaagtgtttgatttgtaaaactgtttcaggtacatgacaaactgaaggcaagg 50727892  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||||| |||  |||| ||||||||||||||    
T  50727893 gacaggacaaaaactcatatttttgtccctcatcaaaccacaacacaactttt 50727945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 95 - 246
Target Start/End: Original strand, 50735807 - 50735959
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||||||||  |||||||||  |||  ||||||| ||||||||||||||||  |  ||||||||||||||||||||||    
T  50735807 tttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtcaagtgtttgatttgtaaaactgtttcaggtacatgacaaactgaaggcaagg 50735906  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||||| |||  |||| ||||||||||||||    
T  50735907 gacaggacaaaaactcatatttttgtccctcatcaaaccacaacacaactttt 50735959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 99 - 246
Target Start/End: Complemental strand, 38812722 - 38812574
Alignment:
Q  99 atttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagggacc 198  Q
    |||||||||||||||||||||| ||||| |||||||||  |||  ||||||| ||||||||||||||||  |  ||| ||||||||| |||||||||||     
T  38812722 atttgctaaaaaataaaggacaggacataacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggaca 38812623  T
Q  199 agataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
     || ||||||  | | |||||||| |||| |||| ||||||||||||||    
T  38812622 ggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttt 38812574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 95 - 246
Target Start/End: Complemental strand, 3649842 - 3649690
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    ||||||||| |||||||| ||||||| ||||  ||||||| |  ||| |||||||| ||||||||||||||||  | ||||  |||||||||||||||||    
T  3649842 tttgatttgttaaaaaatgaaggacaagacagaacaactccagttgtctagtgtttgatttgtaaaactgtttcagggacagaacaaactgaaggcaagg 3649743  T
Q  195 gaccagataaaaac-ataaattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || |||||| | || |||||||| |||| |||| ||| ||||||||||    
T  3649742 gacaggacaaaaactaaaatttttgtccctcaccaaaccacagcacaactttt 3649690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 95 - 246
Target Start/End: Original strand, 22318264 - 22318416
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    ||||||||| |||||||| ||||||||||||  ||||| | | |||| |||||||| ||||||||||||||||| | ||||  ||||||||||||||||     
T  22318264 tttgatttgttaaaaaatgaaggacatgacagaacaaccccagctgtctagtgtttgatttgtaaaactgttttagggacagaacaaactgaaggcaaga 22318363  T
Q  195 gaccagataaaaacataaa-ttttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||    ||| |||||||| |||| |||| ||||||||||||||    
T  22318364 gacaggacaaaatttgaaatttttgtccctcaccaaaccacaacacaactttt 22318416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 95 - 246
Target Start/End: Complemental strand, 36886138 - 36885986
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||||||||||| ||||  |||||||||  |||  ||||||| ||||||||||||||||  |  ||| ||||||||| ||||||||    
T  36886138 tttgatttgctaaaaaataaaggacaagacaaaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaagg 36886039  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||||| |||| |||| ||| ||||||||||    
T  36886038 gacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttt 36885986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 95 - 197
Target Start/End: Complemental strand, 4325997 - 4325895
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||||||| ||| ||||  |||||||||  |||  ||||||| ||||||||||||||||  |  ||||||||||||| ||||||||    
T  4325997 tttgatttgctaaaaaataaagtacaagacaaaacaactctagttgttcagtgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaagg 4325898  T
Q  195 gac 197  Q
    |||    
T  4325897 gac 4325895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 139 - 217
Target Start/End: Original strand, 43189687 - 43189765
Alignment:
Q  139 tgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagggaccagataaaaacataaatttt 217  Q
    |||| ||||||| |||||||||| ||||||||| | ||||||||||||||||||||||| ||| |||||||||| ||||    
T  43189687 tgtacagtgtttgatttgtaaaattgtttttgaaatatgacaaactgaaggcaagggacaagacaaaaacataattttt 43189765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 95 - 246
Target Start/End: Original strand, 2725013 - 2725165
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||| ||||  |||||||||  |||  ||||||| |||||||||||| |||| |  ||| ||||||||| ||||||||    
T  2725013 tttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactcttttaggtacaggacaaactggaggcaagg 2725112  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||||| |||| |||| ||| ||||||||||    
T  2725113 gacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttt 2725165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 95 - 167
Target Start/End: Complemental strand, 2787170 - 2787098
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgttt 167  Q
    |||||||||||||||||| ||||||||||||| |||||||||  ||| |||||||| |||||||||| |||||    
T  2787170 tttgatttgctaaaaaatgaaggacatgacataacaactctagttgtctagtgtttgatttgtaaaattgttt 2787098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 95 - 167
Target Start/End: Complemental strand, 14296773 - 14296701
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgttt 167  Q
    |||||||||||||||||||||||||| ||||| |||||||||| |||  ||||||| |||||||||| |||||    
T  14296773 tttgatttgctaaaaaataaaggacaggacataacaactctaattgtccagtgtttgatttgtaaaattgttt 14296701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 95 - 167
Target Start/End: Complemental strand, 14315021 - 14314949
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgttt 167  Q
    |||||||||||||||||||||||||| ||||| |||||||||| |||  ||||||| |||||||||| |||||    
T  14315021 tttgatttgctaaaaaataaaggacaggacataacaactctaattgtccagtgtttgatttgtaaaattgttt 14314949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 95 - 246
Target Start/End: Original strand, 33176912 - 33177064
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||||||||| ||||||  |||| | ||  |||  ||||||| ||||||||||||||||  |  ||| ||||||||| ||||||||    
T  33176912 tttgatttgctaaaaaataaaggatatgacagaacaattttagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagg 33177011  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||||| |||| |||| ||||||||||||||    
T  33177012 gacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttt 33177064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 95 - 246
Target Start/End: Original strand, 33552722 - 33552874
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||||||||||| ||||  |||||||||  |||  ||||||| ||||||||||||||||  |  ||| |||||| || | ||||||    
T  33552722 tttgatttgctaaaaaataaaggacaggacaaaacaactctagttgttcagtgtttgatttgtaaaactgtttcaggtacaggacaaattggatgcaagg 33552821  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    ||| ||| ||||||  | | |||||||| |||| |||| ||| ||||||||||    
T  33552822 gacaagacaaaaactcatatttttgtccctcaccaaaccacagcacaactttt 33552874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 95 - 246
Target Start/End: Original strand, 38486137 - 38486289
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||||||||  |||||||||  |||  ||||||| ||||||||||||||||  |  ||| || |||||| ||||||||    
T  38486137 tttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggataaactggaggcaagg 38486236  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||||| |||| |||| ||| ||||||||||    
T  38486237 gacatgacaaaaactcatatttttgtccctcaccaaaccacagcacaactttt 38486289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 107 - 197
Target Start/End: Original strand, 31445768 - 31445860
Alignment:
Q  107 aaaaataaaggacatgacatgacaactctaactgtatagtgtttt--atttgtaaaactgtttttgagacatgacaaactgaaggcaagggac 197  Q
    |||||| |||||||||||||||||||||||  |||| | ||| ||  |||||||||||||||||||||| ||||||||| | |||||| ||||    
T  31445768 aaaaatgaaggacatgacatgacaactctagttgtacaatgtctttgatttgtaaaactgtttttgagatatgacaaacgggaggcaaaggac 31445860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 167
Target Start/End: Original strand, 2629831 - 2629903
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgttt 167  Q
    |||||||||||||||||| ||||||||||||| |||||||||  |||   |||||| ||||||||||||||||    
T  2629831 tttgatttgctaaaaaatgaaggacatgacataacaactctagttgtcccgtgtttgatttgtaaaactgttt 2629903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 246
Target Start/End: Complemental strand, 12601092 - 12600940
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||||||||  |||||||||  |||  ||||||| ||||||||||| ||||  |  ||| ||||||||| ||  ||||    
T  12601092 tttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtccagtgtttgatttgtaaaacagtttcaggtacaggacaaactggagataagg 12600993  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    ||| ||| ||||||  | | |||||||| |||  |||| ||||||||||||||    
T  12600992 gacaagacaaaaactcatatttttgtccctcatcaaaccacaacacaactttt 12600940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 246
Target Start/End: Complemental strand, 20694577 - 20694425
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||| | |||||||  |||  |||||||||  |||  ||||||| ||||||||||||||||| |  ||| |||||||||||||||| |    
T  20694577 tttgatttgctaaaaactgaaggacaacacagaacaactctagttgtccagtgtttaatttgtaaaactgttttaggtacaggacaaactgaaggcaaag 20694478  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||||| |||| |||| ||||| ||||||||    
T  20694477 gacaggacaaaaactcatatttttgtccctcaccaaaccacaacgcaactttt 20694425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 246
Target Start/End: Complemental strand, 23522086 - 23521934
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||| ||||  |||||||||  |||  ||||||| ||||||||||||||||  |  ||| ||||||||| | ||||||    
T  23522086 tttgatttgctaaaaaatgaaggacaggacaaaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaagcaagg 23521987  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    ||   || ||||||  | | |||||||| |||| |||| ||||||||||||||    
T  23521986 gataggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttt 23521934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 246
Target Start/End: Complemental strand, 50186734 - 50186582
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||| || |  |||||||||  |||  ||||||| |||||||||| |||||| |   || ||||||||  ||||||||    
T  50186734 tttgatttgctaaaaaatgaaggacaagaaagaacaactctagttgttcagtgtttgatttgtaaaattgttttaggtgcaggacaaactagaggcaagg 50186635  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  |||||||||  | | |||||||| |||| |||| ||||||||||||||    
T  50186634 gacgggataaaaactcatatttttgtccctcaccaaaccacaacacaactttt 50186582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 185
Target Start/End: Complemental strand, 42870177 - 42870087
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactg 185  Q
    ||||||||||||| |||| ||||||||||||| |||||||||  |||   |||||| |||||||||||||||| ||  ||| |||||||||    
T  42870177 tttgatttgctaagaaatgaaggacatgacataacaactctagttgtccggtgtttgatttgtaaaactgtttctggtacaggacaaactg 42870087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 197
Target Start/End: Original strand, 46680390 - 46680492
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||| ||||  |||| ||||  |||  ||||||| ||||||||||||||||  |  ||| ||||||||| ||||||||    
T  46680390 tttgatttgctaaaaaatgaaggacaggacagaacaattctagttgttcagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagg 46680489  T
Q  195 gac 197  Q
    |||    
T  46680490 gac 46680492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 184
Target Start/End: Complemental strand, 47741479 - 47741386
Alignment:
Q  92 gcatttgatttgctaaaaaa-taaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaact 184  Q
    |||||||||||||||||||| ||||||| ||||||||||||||  || |||| | ||||| |||||||||||| ||| ||| |||  |||||||    
T  47741479 gcatttgatttgctaaaaaaataaaggatatgacatgacaacttcaattgtacaatgtttaatttgtaaaactatttctgaaacaacacaaact 47741386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 95 - 246
Target Start/End: Complemental strand, 24002545 - 24002393
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| |||||||  |||  |||||||||  |||  ||||||| ||||||||||| ||||  |  ||| ||||||||| ||||||||    
T  24002545 tttgatttgctaaaaaatgaaggacagtacagaacaactctagttgtccagtgtttgatttgtaaaacagtttcaggtacaggacaaactggaggcaagg 24002446  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||||| |||| |||| ||| ||||||||||    
T  24002445 gacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttt 24002393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 95 - 167
Target Start/End: Complemental strand, 29616372 - 29616300
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgttt 167  Q
    |||||||||||||||||| |||||||||| |  |||||||||  |||  ||||||| ||||||||||||||||    
T  29616372 tttgatttgctaaaaaatgaaggacatgatagaacaactctagttgtccagtgtttgatttgtaaaactgttt 29616300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 95 - 167
Target Start/End: Complemental strand, 32181469 - 32181397
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgttt 167  Q
    |||||||||||||||||| ||||| | |||||||||||| ||  |||  ||||||| ||||||||||||||||    
T  32181469 tttgatttgctaaaaaatgaaggataggacatgacaactttagttgtccagtgtttgatttgtaaaactgttt 32181397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 95 - 246
Target Start/End: Original strand, 50729422 - 50729574
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    ||||||||| |||||||| ||||||| ||||  ||||||  |  |||  ||||||| ||||||||||||||||  | ||||  |||||||| ||||||||    
T  50729422 tttgatttgttaaaaaatgaaggacaagacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcagggacagaacaaactggaggcaagg 50729521  T
Q  195 gaccagataaaaacataaa-ttttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  ||| ||||||| ||||| |||| ||| ||||||||||    
T  50729522 gacatgacaaaaactgaaatttttgtctatcaccaaaccacagcacaactttt 50729574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 95 - 246
Target Start/End: Complemental strand, 52949926 - 52949774
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    ||||||||| |||||||| ||||||| ||||  |||||||||  |||  ||||||| ||||||||||||||||  |  ||| ||||||||| |||||||     
T  52949926 tttgatttgttaaaaaatgaaggacacgacaaaacaactctagttgtccagtgtttcatttgtaaaactgtttcaggtacaggacaaactggaggcaaga 52949827  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||||| |||  |||| ||||||||||||||    
T  52949826 gacaggacaaaaactgatatttttgtccctcagcaaaccacaacacaactttt 52949774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 246
Target Start/End: Complemental strand, 28115460 - 28115306
Alignment:
Q  92 gcatttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggca 191  Q
    ||||||||||||||||||||| ||| | | | ||  ||||||| |  ||| |||||||| ||||||||||||| |||||  ||| ||||||||| |||||    
T  28115460 gcatttgatttgctaaaaaatgaagcaaagggcagaacaactcaagttgtctagtgtttgatttgtaaaactg-ttttggtacaagacaaactggaggca 28115362  T
Q  192 agggaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    ||||||  || |||||   | | |||||||| |||| |||| ||||||||||||||    
T  28115361 agggacaggagaaaaattgatatttttgtccctcaccaaaccacaacacaactttt 28115306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 197
Target Start/End: Original strand, 29785416 - 29785519
Alignment:
Q  95 tttgatttgctaaaaaa-taaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaag 193  Q
    ||||||||||||||||| | ||||||||||||  |||||||||  |||  ||||||| ||||||||||||||||  |  ||| ||||||||| || ||||    
T  29785416 tttgatttgctaaaaaaatgaaggacatgacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagacaag 29785515  T
Q  194 ggac 197  Q
    ||||    
T  29785516 ggac 29785519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 95 - 193
Target Start/End: Complemental strand, 39078867 - 39078769
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaag 193  Q
    ||||||||| |||||||| ||||||||||||  ||||||| |  |||  ||||||| ||||||||||||||||  | ||||  |||||||| |||||||    
T  39078867 tttgatttgttaaaaaatgaaggacatgacagaacaactccagttgtccagtgtttgatttgtaaaactgtttcagggacagaacaaactggaggcaag 39078769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 114 - 246
Target Start/End: Complemental strand, 21202926 - 21202793
Alignment:
Q  114 aaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagggaccagataaaaacata-a 212  Q
    ||||||| ||||  |||||||||  |||  ||||||| ||||||||||||||||  |  ||| ||||||||| ||||||| |||  || ||||||  | |    
T  21202926 aaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttaaggtacaggacaaactggaggcaagagacaggacaaaaactcata 21202827  T
Q  213 attttgtccatcactaaacgacaacacaactttt 246  Q
    ||||||||| |||| |||| ||||||||||||||    
T  21202826 attttgtccctcaccaaaccacaacacaactttt 21202793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 192
Target Start/End: Original strand, 25978492 - 25978588
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaa 192  Q
    ||||||||| |||||||||||||||||||||  ||||||  || | |  ||||||| ||||||||||||||||  | ||||||||||| || ||||||    
T  25978492 tttgatttgttaaaaaataaaggacatgacaaaacaacttcaattatccagtgtttgatttgtaaaactgtttcag-gacatgacaaattggaggcaa 25978588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 246
Target Start/End: Original strand, 47361293 - 47361445
Alignment:
Q  95 tttgatttgctaaaaaa-taaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaag 193  Q
    ||||||||||||||||| | ||||||| ||||  |||||| ||  |||  ||||||| ||||||||||||||||  |  ||| ||||||| | |||||||    
T  47361293 tttgatttgctaaaaaaatgaaggacaggacagaacaactttagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaaccggaggcaag 47361392  T
Q  194 ggaccagataaaa-acataaattttgtccatcactaaacgacaacacaactttt 246  Q
    |||| ||| ||||  ||| | |||||||| |||| |||| ||||||||||||||    
T  47361393 ggacaagacaaaattcat-atttttgtccctcaccaaaccacaacacaactttt 47361445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 246
Target Start/End: Original strand, 55065217 - 55065365
Alignment:
Q  99 atttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaact-gaaggcaagggac 197  Q
    |||||||||||||||| ||||||||||  |||||||||  | |  ||||||| ||||||||||||||||  |  ||| |||||||| || ||||||||||    
T  55065217 atttgctaaaaaataa-ggacatgacagaacaactctagttattcagtgtttgatttgtaaaactgtttcaggtacaagacaaactggagggcaagggac 55065315  T
Q  198 cagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
      || ||||||  | | |||||||| |||| |||| ||||||||||||||    
T  55065316 aggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttt 55065365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 167
Target Start/End: Complemental strand, 1231517 - 1231445
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgttt 167  Q
    |||||||||||||||||| ||||| | ||||  |||||||||  |||  ||||||| ||||||||||||||||    
T  1231517 tttgatttgctaaaaaatgaaggataggacagaacaactctagttgtccagtgtttgatttgtaaaactgttt 1231445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 246
Target Start/End: Complemental strand, 6776784 - 6776632
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||| ||||  |||||||||  |||  ||||||| |||||||||| || ||| |  | |  ||||| || ||||||||    
T  6776784 tttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaattgatttaggtatagcacaaattggaggcaagg 6776685  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||||| |||| |||| ||||||||||||||    
T  6776684 gacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttt 6776632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 167
Target Start/End: Original strand, 9512220 - 9512292
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgttt 167  Q
    |||||||||||||||||  |||||||||| |  |||||||||  |||  ||||||| ||||||||||||||||    
T  9512220 tttgatttgctaaaaaacgaaggacatgatagaacaactctagttgttcagtgtttgatttgtaaaactgttt 9512292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 246
Target Start/End: Complemental strand, 21580231 - 21580080
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||||| ||||| ||||  |||| ||||| |||  ||| ||| ||||||||||||||||  |  ||| |||||| || ||||||||    
T  21580231 tttgatttgctaaaaaataa-ggacaggacagaacaattctaattgtccagtatttgatttgtaaaactgtttcaggtacaggacaaattggaggcaagg 21580133  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||||| |||| |||| ||| ||||||||||    
T  21580132 gacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttt 21580080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 246
Target Start/End: Complemental strand, 24210525 - 24210373
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| || || | |||   |||||||||| |||   |||||| ||||||||||||||||  |  ||| ||||||||| ||||||||    
T  24210525 tttgatttgctaaaaaatgaaagataggacggaacaactctaattgtccggtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagg 24210426  T
Q  195 gaccagataaaaacataaatt-ttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | ||| |||||| |||| |||| ||| ||||||||||    
T  24210425 gacaggacaaaaactcatattattgtccctcaccaaaccacagcacaactttt 24210373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 167
Target Start/End: Complemental strand, 36497423 - 36497351
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgttt 167  Q
    |||||||||||||||||| ||||| | ||||  |||||||||  |||  ||||||| ||||||||||||||||    
T  36497423 tttgatttgctaaaaaatgaaggataggacaaaacaactctagttgtccagtgtttgatttgtaaaactgttt 36497351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 246
Target Start/End: Complemental strand, 37865947 - 37865807
Alignment:
Q  107 aaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagggaccagataaaa 206  Q
    |||||| ||||||| ||||| |||||||||  |||  ||||||| ||||||||||||||||  |  ||||||||| ||| ||||||| |||  || ||||    
T  37865947 aaaaatgaaggacacgacataacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaatctggaggcaagagacatgacaaaa 37865848  T
Q  207 acata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    ||  | | |||||||| |||| |||  ||||||||||||||    
T  37865847 actcatatttttgtccctcaccaaatcacaacacaactttt 37865807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 182
Target Start/End: Complemental strand, 43739645 - 43739557
Alignment:
Q  94 atttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaa 182  Q
    ||||||||||||||||||| |||||| ||| | |||||||  |  |||| | ||||| ||||||||||||||||  | |||||||||||    
T  43739645 atttgatttgctaaaaaatgaaggacgtgataagacaacttcagttgtaaaatgtttgatttgtaaaactgtttgagggacatgacaaa 43739557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 167
Target Start/End: Original strand, 44324222 - 44324294
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgttt 167  Q
    |||||||||||| ||||| ||||||||||||  ||||||| |  |||  ||||||| ||||||||||||||||    
T  44324222 tttgatttgctagaaaatgaaggacatgacagaacaactccagttgttcagtgtttgatttgtaaaactgttt 44324294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 193
Target Start/End: Original strand, 45577595 - 45577667
Alignment:
Q  122 gacatgacaactctaactgtatagtgttttatttgtaaaa-ctgtttttgagacatgacaaactgaaggcaag 193  Q
    ||||||||||||| ||| ||||| ||||| |||||||||| |||||||   |||||||||||||| |||||||    
T  45577595 gacatgacaactccaacggtataatgtttgatttgtaaaagctgttttatggacatgacaaactggaggcaag 45577667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 246
Target Start/End: Complemental strand, 9948138 - 9947983
Alignment:
Q  92 gcatttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggca 191  Q
    |||||||||||| |||||||   ||||||| | ||||||| |  || |||||| ||||| ||||||||||||||||  |  ||||||||||||  |||||    
T  9948138 gcatttgatttgttaaaaaacggaggacatcaaatgacaatttcaattgtataatgtttgatttgtaaaactgtttaaggaacatgacaaacttgaggca 9948039  T
Q  192 agggaccagataaaaacataaatt-ttgtccatcactaaacgacaacacaactttt 246  Q
    || |||  || ||||||  ||||| || ||| ||||||||| |||  |||||||||    
T  9948038 agagacatgacaaaaactaaaattcttatccctcactaaaccacattacaactttt 9947983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 245
Target Start/End: Complemental strand, 11056248 - 11056097
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| |||| || || |  ||||||  |  |||  ||||||| ||||||||||||||||  |  ||| ||||||||| ||||||||    
T  11056248 tttgatttgctaaaaaatgaaggtcaggataaaacaacttcagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagg 11056149  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaacttt 245  Q
    ||| ||| ||||||  | | |||||||| | || |||| |||||||||||||    
T  11056148 gacaagacaaaaactgatatttttgtcccttaccaaaccacaacacaacttt 11056097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 193
Target Start/End: Original strand, 20517901 - 20518000
Alignment:
Q  95 tttgatttgctaaaaaa-taaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaag 193  Q
    ||||||||||||||||| | ||||||| ||||  |||||||||  |||  ||||||| ||||||||||||||||  |  ||| ||||||||| |||||||    
T  20517901 tttgatttgctaaaaaaatgaaggacaggacagaacaactctagttgttcagtgtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaag 20518000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 246
Target Start/End: Complemental strand, 42772984 - 42772842
Alignment:
Q  105 taaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagggaccagataa 204  Q
    |||||||| || |||||||||| |||||| ||  | |  ||||||| |||||||||| |||||  |  ||||||||||||  ||||||| ||| ||| ||    
T  42772984 taaaaaatgaatgacatgacataacaactttagttttcaagtgtttgatttgtaaaattgtttcaggtacatgacaaacttgaggcaagagacaagacaa 42772885  T
Q  205 aaacataaatttt-gtccatcactaaacgacaacacaactttt 246  Q
    ||||  | ||||| |||| |||| |||| ||||||||||||||    
T  42772884 aaactcatatttttgtccttcaccaaaccacaacacaactttt 42772842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 193
Target Start/End: Original strand, 50178372 - 50178470
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaag 193  Q
    |||||||||||||||||| ||||||| ||||  ||||||  |  |||  ||||||| ||||||||||||||||  |  ||| ||||||||| |||||||    
T  50178372 tttgatttgctaaaaaatgaaggacaggacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 50178470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 246
Target Start/End: Complemental strand, 55594092 - 55593939
Alignment:
Q  95 tttgatttgctaaaaaa-taaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaag 193  Q
    ||||||||||||||||| | ||| ||| ||||  |||||||||  |||  ||| ||| ||||||||||||||||  |  |||||| |||||| |||||||    
T  55594092 tttgatttgctaaaaaaatgaagaacaggacagaacaactctagttgtccagtatttgatttgtaaaactgtttcaggtacatgataaactggaggcaag 55593993  T
Q  194 ggaccagataaaaacataaatttt-gtccatcactaaacgacaacacaactttt 246  Q
    ||||  || ||||||  | ||||| |||| |||| |||| ||| ||||||||||    
T  55593992 ggacaggacaaaaactcatattttagtccctcaccaaaccacagcacaactttt 55593939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 167
Target Start/End: Complemental strand, 23328102 - 23328030
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgttt 167  Q
    |||||||||||||||||| ||||| ||||||  |||||||||  |||   |||||| | ||||||||||||||    
T  23328102 tttgatttgctaaaaaatgaaggatatgacagaacaactctagttgtcatgtgtttgacttgtaaaactgttt 23328030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 246
Target Start/End: Original strand, 44649044 - 44649196
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||| ||||  ||||||| |  | |  ||| ||| ||||||||||||||||  |  ||| ||||||||| |||||||     
T  44649044 tttgatttgctaaaaaatgaaggacaggacagaacaactccagttatccagtttttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaga 44649143  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||||| |||  |||| ||||||||||||||    
T  44649144 gacaggacaaaaactgatatttttgtccctcagcaaaccacaacacaactttt 44649196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 163
Target Start/End: Complemental strand, 54543194 - 54543127
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaact 163  Q
    |||||||||||||||||| ||| ||||||||  |||||||||  |||  ||||||| ||||||||||||    
T  54543194 tttgatttgctaaaaaatgaag-acatgacagaacaactctagttgttcagtgtttgatttgtaaaact 54543127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 4e-22; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 95 - 208
Target Start/End: Original strand, 3922591 - 3922704
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||||||||  |||||||||  |||  ||||||||||||||||||||||||  |  ||| ||||||||| ||||||||    
T  3922591 tttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtccagtgttttatttgtaaaactgtttcaggtacaggacaaactggaggcaagg 3922690  T
Q  195 gaccagataaaaac 208  Q
    ||| ||| ||||||    
T  3922691 gacaagacaaaaac 3922704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 95 - 246
Target Start/End: Complemental strand, 21785078 - 21784926
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||||||||  |||||||||  |||  ||||||| ||||||||||||||||  |  ||||||||||||| |||||||     
T  21785078 tttgatttgctaaaaaatgaaggacatgacagaacaactctagttgttcagtgtttgatttgtaaaactgtttcaggcacatgacaaactggaggcaaga 21784979  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||||| |||| |||| ||||||||||||||    
T  21784978 gacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttt 21784926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 95 - 246
Target Start/End: Original strand, 10932445 - 10932597
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||| ||||  |||||||||  |||  ||||||| ||||||||||||||||  |  ||| ||||||||| ||||||||    
T  10932445 tttgatttgctaaaaaatgaaggacaggacagaacaactctagttgttcagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagg 10932544  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||||| |||| |||| ||||||||||||||    
T  10932545 gacaggacaaaaactcatatttttgtccctcaccaaactacaacacaactttt 10932597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 95 - 246
Target Start/End: Original strand, 43213813 - 43213965
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||| ||| ||||  ||||||  |  ||| |||||||| |||||||||||||||||    ||| ||||||||||||||||||    
T  43213813 tttgatttgctaaaaaatgaagaacaggacagaacaacttcagttgtctagtgtttgatttgtaaaactgttttcagtacaggacaaactgaaggcaagg 43213912  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    ||| |||||||| |  | | |||||||| |||| |||| ||||||||||||||    
T  43213913 gacaagataaaagctgatatttttgtccttcaccaaaccacaacacaactttt 43213965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 95 - 246
Target Start/End: Complemental strand, 44748902 - 44748750
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||||||||||| ||||  |||||||||  |||  ||||||| ||||||||||||||||  |  ||||||||||||  ||||||||    
T  44748902 tttgatttgctaaaaaataaaggacaggacaaaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaactagaggcaagg 44748803  T
Q  195 gaccagataaaaacataaa-ttttgtccatcactaaacgacaacacaactttt 246  Q
    |||   | ||||||  ||| |||||||| |||| |||| |||| |||||||||    
T  44748802 gacagaacaaaaactcaaatttttgtccctcaccaaaccacaatacaactttt 44748750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 95 - 246
Target Start/End: Complemental strand, 11250824 - 11250672
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||||||||  |||||||||  |||  ||||||| |||||||||| |||||  |  ||| ||||||||| ||||||||    
T  11250824 tttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtccagtgtttcatttgtaaaattgtttcaggtacaggacaaactggaggcaagg 11250725  T
Q  195 gaccagataaaaa--cataaattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || |||||  ||| | |||||||| |||| |||| ||||||||||||||    
T  11250724 gacaggacaaaaaatcat-atttttgtccctcaccaaaccacaacacaactttt 11250672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 95 - 197
Target Start/End: Original strand, 26994113 - 26994215
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||| ||||  |||||||||  |||  ||||||| ||||||||||||||||  |  ||||||||||||| ||||||||    
T  26994113 tttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaagg 26994212  T
Q  195 gac 197  Q
    |||    
T  26994213 gac 26994215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 106 - 246
Target Start/End: Original strand, 21408526 - 21408666
Alignment:
Q  106 aaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagggaccagataaa 205  Q
    ||||||| ||||||||||||||||| |||||  |||| | | ||| ||||||||| ||||||||| ||||  |||||||| |||||||||||  || |||    
T  21408526 aaaaaatgaaggacatgacatgacatctctagttgtacaatatttgatttgtaaagctgtttttgggacaacacaaactggaggcaagggacatgacaaa 21408625  T
Q  206 aacataaattttgtccatcactaaacgacaacacaactttt 246  Q
     ||| ||  ||||||| ||| ||||| |||||| |||||||    
T  21408626 gacaaaacatttgtccctcattaaaccacaacataactttt 21408666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 95 - 246
Target Start/End: Original strand, 43158574 - 43158726
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||| ||||  |||||||||  |||  ||||||| ||||||||||||||||  |  ||| ||||||||| ||||||||    
T  43158574 tttgatttgctaaaaaatgaaggacaagacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagg 43158673  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||||| | || |||| ||||||||||||||    
T  43158674 gacaggacaaaaactcatatttttgtcccttaccaaaccacaacacaactttt 43158726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 197
Target Start/End: Complemental strand, 18386731 - 18386629
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||| ||||  |||| ||||  |||  ||||||| ||||||||||||||||  |  ||||||||||||| ||||||||    
T  18386731 tttgatttgctaaaaaatgaaggacaggacagaacaattctagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaagg 18386632  T
Q  195 gac 197  Q
    |||    
T  18386631 gac 18386629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 185
Target Start/End: Complemental strand, 46633899 - 46633809
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactg 185  Q
    |||||||||||||||||| ||||||||||||  |||||||||  |||  ||||||| ||||||||||||||||  || ||| |||||||||    
T  46633899 tttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactg 46633809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 95 - 196
Target Start/End: Complemental strand, 16963345 - 16963244
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    ||||||||| |||||||| ||||||| ||||  |||||||||| |||  ||||||| ||||||||||||||||  |  ||||||||||||  ||||||||    
T  16963345 tttgatttgttaaaaaatgaaggacaggacagaacaactctaattgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaactagaggcaagg 16963246  T
Q  195 ga 196  Q
    ||    
T  16963245 ga 16963244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 246
Target Start/End: Original strand, 47316586 - 47316738
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||| ||||||  | |||||||  |||  ||||||| |||||||||| |||||  |  ||| ||||||||| ||||||||    
T  47316586 tttgatttgctaaaaaatgaaggatatgacagaataactctagttgtccagtgtttgatttgtaaaattgtttcaggtacaggacaaactggaggcaagg 47316685  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||||| |||| |||| ||||||||||||||    
T  47316686 gacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttt 47316738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 246
Target Start/End: Complemental strand, 47953397 - 47953245
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| || |||| ||||  |||||||||  |||  ||||||| ||||||||||||||||  |  ||| ||||||||| ||||||||    
T  47953397 tttgatttgctaaaaaatgaacgacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagg 47953298  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||||| |||| |||| ||| ||||||||||    
T  47953297 gacatgacaaaaactcatatttttgtccctcaccaaaccacagcacaactttt 47953245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 246
Target Start/End: Complemental strand, 1870345 - 1870190
Alignment:
Q  92 gcatttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggca 191  Q
    ||||||||||||||||||||| |||||||   ||  |||||||||  |||  ||||||| ||||||||||||||||  |  ||| || |||||| |||||    
T  1870345 gcatttgatttgctaaaaaatgaaggacagtgcagaacaactctagttgttcagtgtttgatttgtaaaactgtttcaggtacaagataaactggaggca 1870246  T
Q  192 agggaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    ||||||  || ||||||  | | |||||||| |||| |||| ||||||||||||||    
T  1870245 agggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttt 1870190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 197
Target Start/End: Complemental strand, 40753362 - 40753260
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||||| ||||||||||  ||||||||   |||  | ||||| ||||||||||||||||  |  ||| ||||||||| ||||||||    
T  40753362 tttgatttgctaaaaaataagggacatgacagaacaactctcgttgtccaatgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagg 40753263  T
Q  195 gac 197  Q
    |||    
T  40753262 gac 40753260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 95 - 246
Target Start/End: Complemental strand, 11822430 - 11822278
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||| ||||||||||||||||| ||||  ||||||  |  |||  ||||||| ||| ||||||||||||  |  ||| ||||||||| | ||||||    
T  11822430 tttgatttactaaaaaataaaggacaggacagaacaacttcacttgtccagtgtttgattcgtaaaactgtttgaggtacaggacaaactggatgcaagg 11822331  T
Q  195 gaccagataaaaacataaatttt-gtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | ||||| |||| ||||||||| ||||||||||||||    
T  11822330 gacatgacaaaaactcatatttttgtccttcactaaaccacaacacaactttt 11822278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 95 - 246
Target Start/End: Original strand, 43189130 - 43189282
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    ||||||||||||||||||  |||||||||||  |||||||||  |||  ||||||| |||| ||||| |||||  |  ||| ||||||||| ||| ||||    
T  43189130 tttgatttgctaaaaaatggaggacatgacaaaacaactctagttgtccagtgtttgatttataaaaatgtttcaggtacaggacaaactggaggtaagg 43189229  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||||| |||| |||| ||||||||||||||    
T  43189230 gacatgacaaaaactcatatttttgtccctcaccaaaccacaacacaactttt 43189282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 95 - 161
Target Start/End: Original strand, 15035139 - 15035205
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaa 161  Q
    |||||||||||||||||| ||  |||||||||||||||||||| | || | ||||| ||||||||||    
T  15035139 tttgatttgctaaaaaatgaaatacatgacatgacaactctaattatacaatgtttaatttgtaaaa 15035205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 95 - 193
Target Start/End: Complemental strand, 26700684 - 26700586
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaag 193  Q
    ||||||||| |||||||| ||||||||||||| |||| || |  |||  ||||||| ||||||| ||||||||  |  ||||||||||||| |||||||    
T  26700684 tttgatttggtaaaaaatgaaggacatgacataacaattccagttgtccagtgtttgatttgtataactgtttcaggtacatgacaaactggaggcaag 26700586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 246
Target Start/End: Complemental strand, 38301550 - 38301397
Alignment:
Q  95 tttgatttgctaaaaaa-taaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaag 193  Q
    ||||||||||||||||| | ||||||| ||||  ||||||| || |||  ||||||| ||||||||||||||||  |  ||| ||||||||| |||||||    
T  38301550 tttgatttgctaaaaaaatgaaggacaggacagaacaactccaattgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 38301451  T
Q  194 ggaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
     |||  || ||||||  | | |||||||| |||  |||| ||||||||||||||    
T  38301450 agacaggacaaaaactgatatttttgtccctcagcaaaccacaacacaactttt 38301397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 246
Target Start/End: Original strand, 11321773 - 11321925
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||| ||||||||  |||||||||  |||  | ||||| ||||||||||||| ||  |  ||| ||||||||| |||||| |    
T  11321773 tttgatttgctaaaaaatgaagaacatgacagaacaactctagttgtccaatgtttgatttgtaaaactgattcaggtacaggacaaactggaggcaacg 11321872  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||||| |||| |||| ||| ||||||||||    
T  11321873 gacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttt 11321925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 246
Target Start/End: Original strand, 30849134 - 30849286
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    ||||||||| |||||||| ||||||| ||||  |||| ||||  |||  | || || ||||||||||||||||| |  ||| |||||||||  |||||||    
T  30849134 tttgatttgttaaaaaatgaaggacaagacagaacaattctagttgtccaatgattgatttgtaaaactgttttaggtacaggacaaactggtggcaagg 30849233  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||||| |||| |||| ||||||||||||||    
T  30849234 gacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttt 30849286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 246
Target Start/End: Original strand, 36769457 - 36769609
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| |||||||  | |  |||||||||  |||  ||||||| ||||||||||||||||  |  ||| ||||||||  ||||||||    
T  36769457 tttgatttgctaaaaaatgaaggacagaatagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactagaggcaagg 36769556  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||||| |||| |||| ||| ||||||||||    
T  36769557 gacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttt 36769609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 246
Target Start/End: Original strand, 41211088 - 41211240
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||| ||||  ||||||| |  ||   ||||||| ||||||||||||||||  |  ||| ||||||||  ||||||||    
T  41211088 tttgatttgctaaaaaatgaaggacaggacagaacaactcaagttgcccagtgtttgatttgtaaaactgtttcaggtacaagacaaactagaggcaagg 41211187  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||||| |||| |||| ||| ||||||||||    
T  41211188 gacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttt 41211240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 167
Target Start/End: Complemental strand, 43368408 - 43368336
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgttt 167  Q
    |||||||||||||||||| ||||||| ||||  ||||||| |  |||  ||||||| ||||||||||||||||    
T  43368408 tttgatttgctaaaaaatgaaggacaggacagaacaactccagttgtccagtgtttgatttgtaaaactgttt 43368336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 246
Target Start/End: Complemental strand, 329627 - 329525
Alignment:
Q  145 gtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagggaccagataaaaacataaa-ttttgtccatcactaaacgacaacacaact 243  Q
    |||||| ||||||||||||||||  | ||||  |||||||| |||||| |||| ||| ||||||  ||| |||||||| |||| |||| ||| |||||||    
T  329627 gtgtttgatttgtaaaactgtttcagggacagaacaaactggaggcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaact 329528  T
Q  244 ttt 246  Q
    |||    
T  329527 ttt 329525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 161
Target Start/End: Complemental strand, 17237283 - 17237217
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaa 161  Q
    |||||||||||||||||| ||||||||||||  ||||||| |  |||  ||||||| ||||||||||    
T  17237283 tttgatttgctaaaaaatgaaggacatgacagaacaactccagttgtccagtgtttgatttgtaaaa 17237217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 197
Target Start/End: Original strand, 26371697 - 26371799
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||| | ||||  |||||||||  |||  ||||||| ||||| |||||| |||  |  ||| ||||||||| ||||||||    
T  26371697 tttgatttgctaaaaaatgaaggataggacagaacaactctagttgtccagtgtttgatttgcaaaactatttcaggtacaggacaaactggaggcaagg 26371796  T
Q  195 gac 197  Q
    |||    
T  26371797 gac 26371799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 193
Target Start/End: Complemental strand, 18470888 - 18470791
Alignment:
Q  96 ttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaag 193  Q
    ||||||||||| ||||| ||||||| || |  |||||||||  |||  ||||||| ||||||||||||||||  |  ||| ||||||||| |||||||    
T  18470888 ttgatttgctacaaaatgaaggacaggatagaacaactctagttgtcgagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 18470791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 238
Target Start/End: Complemental strand, 2049114 - 2049014
Alignment:
Q  139 tgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagggaccagataaaaacataaatttt-gtccatcactaaacgacaac 237  Q
    |||||| ||||| ||||| |||| |||||||| |||  ||||||||  |||||||| ||   | ||||| ||||||||| |||||||||||||| |||||    
T  2049114 tgtataatgtttgatttgaaaaattgtttttgggacgggacaaactagaggcaaggaacataacaaaaatataaatttttgtccatcactaaaccacaac 2049015  T
Q  238 a 238  Q
    |    
T  2049014 a 2049014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 246
Target Start/End: Complemental strand, 29661529 - 29661378
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||| | || |  |||||||||  |||  ||||||| ||||||| ||||| ||  |  ||||||||||||| ||||||||    
T  29661529 tttgatttgctaaaaaatgaaggata-gatagaacaactctagttgtccagtgtttgatttgtagaactgattcaggtacatgacaaactggaggcaagg 29661431  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||||| |||| |||| ||| ||||||||||    
T  29661430 gacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttt 29661378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 167
Target Start/End: Complemental strand, 48894924 - 48894852
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgttt 167  Q
    |||||||||||||||||| ||||||| ||||  ||||||| |  |||  ||||||| |||||||||| |||||    
T  48894924 tttgatttgctaaaaaatgaaggacaggacagaacaactccagttgtccagtgtttgatttgtaaaattgttt 48894852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 95 - 246
Target Start/End: Complemental strand, 15375 - 15223
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||| ||||  |||||||||| |||  ||||||| ||||||||||||||||  |  ||| ||||||||| ||||||||    
T  15375 tttgatttgctaaaaaatgaaggacaagacaaaacaactctaattgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagg 15276  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    ||| ||| ||||||  | | ||||||||  ||| |||| ||||||||||||||    
T  15275 gacaagacaaaaactcatatttttgtcccccaccaaaccacaacacaactttt 15223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 2e-21; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 95 - 246
Target Start/End: Original strand, 30542924 - 30543076
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||||||||| |||||| ||  |||  ||||||| ||||||||||||||||  |  ||||||||||||| |||||| |    
T  30542924 tttgatttgctaaaaaatgaaggacatgacataacaactttagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaatg 30543023  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||||| |||| |||| ||||||||||||||    
T  30543024 gacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttt 30543076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 95 - 246
Target Start/End: Original strand, 8672957 - 8673109
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||| ||||  |||||| ||  |||  ||||||| ||||||||||||||||  |  ||||||||||||| ||||||||    
T  8672957 tttgatttgctaaaaaatgaaggacaggacaaaacaactatagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaagg 8673056  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||||| |||| |||| ||||||||||||||    
T  8673057 gacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttt 8673109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 95 - 245
Target Start/End: Complemental strand, 39643086 - 39642935
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||||||||  ||||||  |  |||  ||||||| |||| |||||||||||  |  ||| ||||||||| ||||||||    
T  39643086 tttgatttgctaaaaaatgaaggacatgacagaacaacttcagttgtccagtgtttgatttttaaaactgtttcaggtacaggacaaactggaggcaagg 39642987  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaacttt 245  Q
    ||| ||||||||||  | | |||||||| |||| |||| |||||||||||||    
T  39642986 gacaagataaaaactgatatttttgtccctcaccaaaccacaacacaacttt 39642935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 95 - 208
Target Start/End: Complemental strand, 10467267 - 10467154
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||| ||||  |||||||||  |||  ||||||| ||||||||||||||||| |  ||| ||||||||| |||||||     
T  10467267 tttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgttttaggtacaggacaaactggaggcaaga 10467168  T
Q  195 gaccagataaaaac 208  Q
    ||| ||| ||||||    
T  10467167 gacaagacaaaaac 10467154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 95 - 246
Target Start/End: Complemental strand, 4052683 - 4052531
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||||||||||| ||||  |||||||||  |||  ||||||| ||||||||||||||||  |  ||| |||||| || ||||||||    
T  4052683 tttgatttgctaaaaaataaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaattggaggcaagg 4052584  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||||| |||| |||| ||| ||||||||||    
T  4052583 gacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttt 4052531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 95 - 246
Target Start/End: Original strand, 14004946 - 14005098
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||| | ||||| |||| | ||  |||  ||| ||| ||||||||||||||||  |  ||| ||||||||| ||||||||    
T  14004946 tttgatttgctaaaaaatgaaggataggacataacaattttagttgtccagtatttgatttgtaaaactgtttgaggtacaggacaaactggaggcaagg 14005045  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    ||| ||| ||||||  | | ||||||||||||| |||| ||||||||||||||    
T  14005046 gacaagacaaaaactcatatttttgtccatcaccaaaccacaacacaactttt 14005098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 95 - 246
Target Start/End: Complemental strand, 34101711 - 34101559
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||| ||||  |||||||||  |||  ||||||| ||||||||||||||||  |  ||| ||||||||| ||||||||    
T  34101711 tttgatttgctaaaaaatgaaggacaagacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagg 34101612  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    ||| | | ||||||  | | |||||||| |||| |||| |||||| |||||||    
T  34101611 gacaacacaaaaactcatatttttgtccctcaccaaaccacaacataactttt 34101559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 197
Target Start/End: Complemental strand, 25478446 - 25478344
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||| ||||| |||||||||  |||  ||||||| ||||||||||||||||  |  ||| ||||||||| || |||||    
T  25478446 tttgatttgctaaaaaatgaaggacaggacataacaactctagttgtccagtgtttaatttgtaaaactgtttcaggtacaggacaaactggagacaagg 25478347  T
Q  195 gac 197  Q
    |||    
T  25478346 gac 25478344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 197
Target Start/End: Complemental strand, 34063331 - 34063229
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||||||||  |||||||||  |||  ||||||| |||||||||||| |||  |  ||| ||||||||| ||||||||    
T  34063331 tttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtccagtgtttgatttgtaaaactctttcaggtacaggacaaactggaggcaagg 34063232  T
Q  195 gac 197  Q
    |||    
T  34063231 gac 34063229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 246
Target Start/End: Original strand, 7394716 - 7394868
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||||||||  |||||||||  |||  ||||||| ||||  ||||||||||  |  ||||||||||||  ||||||||    
T  7394716 tttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtccagtgtttgatttacaaaactgtttcaggtacatgacaaactagaggcaagg 7394815  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||||| |||| |||| | ||||||||||||    
T  7394816 gacatgacaaaaactcatatttttgtccctcaccaaaccataacacaactttt 7394868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 246
Target Start/End: Original strand, 12753227 - 12753379
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||| ||||  |||||||||  |||  ||||||| |||||||| |||||||  |  ||| ||||||||||||||||      
T  12753227 tttgatttgctaaaaaatgaaggacaggacaaaacaactctagttgtccagtgtttgatttgtaagactgtttcaggtacaggacaaactgaaggcaaat 12753326  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    ||| ||| ||||||  | | |||||| | |||| |||| ||||||||||||||    
T  12753327 gacaagacaaaaactcatatttttgttcctcaccaaaccacaacacaactttt 12753379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 246
Target Start/End: Original strand, 31513485 - 31513637
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||||||||  |||||||||  | |  ||||||| |||||||||| |||||  |  | ||||||||||| ||||||||    
T  31513485 tttgatttgctaaaaaatgaaggacatgacagaacaactctagttatccagtgtttgatttgtaaaattgtttcaggtagatgacaaactggaggcaagg 31513584  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||||| |||| |||| ||| ||||||||||    
T  31513585 gacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttt 31513637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 99 - 246
Target Start/End: Complemental strand, 17520793 - 17520646
Alignment:
Q  99 atttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagggacc 198  Q
    |||||||||||||| ||||||||||||  ||||||| |  |||   |||||| |||||||||| |||||| |   ||||| ||| || |||||||||||     
T  17520793 atttgctaaaaaatgaaggacatgacagaacaactccagttgtccggtgtttgatttgtaaaagtgttttaggtgcatgataaaatggaggcaagggaca 17520694  T
Q  199 agataaaaacataaattttgtccatcactaaacgacaacacaactttt 246  Q
     |  |||||| || ||||||||| |||| |||| ||||||||||||||    
T  17520693 gggcaaaaacttatattttgtccctcaccaaaccacaacacaactttt 17520646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 248
Target Start/End: Complemental strand, 10932927 - 10932785
Alignment:
Q  106 aaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagggaccagataaa 205  Q
    ||||||||||||||| |||   ||||||  |  ||||| |||||| |||| ||||| ||||| || |||| |||||| |  ||||||| |||  ||||||    
T  10932927 aaaaaataaaggacaagaccaaacaacttcagttgtatggtgtttgatttataaaattgtttatgggacaagacaaagtagaggcaagagacatgataaa 10932828  T
Q  206 aacataaattttgtccatcactaaacgacaacacaacttttag 248  Q
    |||  ||||||||||| ||||||||| ||| ||||||||||||    
T  10932827 aactaaaattttgtccctcactaaaccacatcacaacttttag 10932785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 194
Target Start/End: Original strand, 13406831 - 13406936
Alignment:
Q  89 aaagcatttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaag 188  Q
    ||||| |||||||||||||||||| ||||| | | ||  |||||||||  ||| |||||||| ||||||||||||||||  |  | ||||||||||| ||    
T  13406831 aaagcgtttgatttgctaaaaaatgaaggatagggcagaacaactctagttgtctagtgtttaatttgtaaaactgtttcaggtatatgacaaactggag 13406930  T
Q  189 gcaagg 194  Q
    ||||||    
T  13406931 gcaagg 13406936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 246
Target Start/End: Original strand, 16595063 - 16595203
Alignment:
Q  106 aaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagggaccagataaa 205  Q
    ||||||| |||||||||||| |||||| | |  |||||| ||||| |||||| ||| ||||| || ||||  |||||||| |||||||||||  || |||    
T  16595063 aaaaaatgaaggacatgacaggacaacaccagttgtatattgtttgatttgt-aaattgtttctgggacagaacaaactgtaggcaagggacaggacaaa 16595161  T
Q  206 aacat-aaattttgtccatcactaaacgacaacacaactttt 246  Q
    ||||| || |||||||| || |||| | ||||||||||||||    
T  16595162 aacatgaagttttgtccctcgctaatccacaacacaactttt 16595203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 192
Target Start/End: Complemental strand, 41709980 - 41709883
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaa 192  Q
    |||||||||||||||||| ||||||| ||||  |||||||||  |||  ||||||| ||||||||||||||||  |  ||| ||||||||| ||||||    
T  41709980 tttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaa 41709883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 208
Target Start/End: Complemental strand, 45446658 - 45446545
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||| | ||||  | |||||||  |||  ||||||| ||||||||||||||||  |  ||| ||||||||| ||||||||    
T  45446658 tttgatttgctaaaaaatgaaggataagacaaaataactctagttgtccagtgtttgatttgtaaaactgtttcaggtacacgacaaactggaggcaagg 45446559  T
Q  195 gaccagataaaaac 208  Q
    |||  |||||||||    
T  45446558 gacaggataaaaac 45446545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 95 - 246
Target Start/End: Original strand, 3251558 - 3251710
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||||||||| | ||||  |||||||||  |||  ||||||| |||| |||||||||||  |  ||| ||||||||| |||||||     
T  3251558 tttgatttgctaaaaaataaaggataagacagaacaactctagttgtccagtgtttgatttataaaactgtttcaggtacaggacaaactggaggcaagc 3251657  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||   | |||||| || | |||||||| |||| |||| ||| ||||||||||    
T  3251658 gacagaacaaaaacttatatttttgtccctcaccaaaccacatcacaactttt 3251710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 99 - 246
Target Start/End: Original strand, 5968770 - 5968918
Alignment:
Q  99 atttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagggacc 198  Q
    |||||||||||||| ||||| | ||||  |||||||||  |||  ||||||| ||||||||||||||||  |  ||||||||||||  |||||||||||     
T  5968770 atttgctaaaaaatgaaggataggacaaaacaactctagttgtccagtgtttgatttgtaaaactgtttaaggtacatgacaaactagaggcaagggaca 5968869  T
Q  199 agataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
     || ||||||  | | |||||||| |||| |||| ||| ||||||||||    
T  5968870 ggacaaaaactcatatttttgtccttcaccaaaccacagcacaactttt 5968918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 95 - 246
Target Start/End: Original strand, 29610957 - 29611109
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    ||||||||| |||||||| ||||||||||||  ||||||  |  |||  | ||||| ||||||||||||||||  | ||||  |||||||| ||||||||    
T  29610957 tttgatttgttaaaaaatgaaggacatgacagaacaacttcagttgtccaatgtttgatttgtaaaactgtttcagggacagaacaaactggaggcaagg 29611056  T
Q  195 gaccagataaaaacataaa-ttttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  ||| |||||||| || | |||| ||||||||||||||    
T  29611057 gacaggacaaaaactgaaatttttgtccctcgccaaaccacaacacaactttt 29611109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 95 - 246
Target Start/End: Complemental strand, 30501348 - 30501196
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||||| ||  ||||||  |  ||   ||||||| ||||||||||||||||  |  ||| ||||||||| ||||||||    
T  30501348 tttgatttgctaaaaaatgaaggacatggcagaacaacttcagttgcccagtgtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaagg 30501249  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||| | | |||||||| |||| |||| ||| ||||||||||    
T  30501248 gacaggacaaaaacacatatttttgtccctcaccaaaccacagcacaactttt 30501196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 96 - 164
Target Start/End: Complemental strand, 42110763 - 42110695
Alignment:
Q  96 ttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactg 164  Q
    ||||||||||||||| |||||||| | ||||||||| |  || |||||||||||| |||||||||||||    
T  42110763 ttgatttgctaaaaagtaaaggacgtaacatgacaaattcaattgtatagtgtttgatttgtaaaactg 42110695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 95 - 167
Target Start/End: Complemental strand, 45114258 - 45114186
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgttt 167  Q
    ||||||||||||||| || ||||||| ||||||||||||  || |||  ||||||| ||||||||||||||||    
T  45114258 tttgatttgctaaaacatgaaggacaggacatgacaacttcaattgttcagtgtttgatttgtaaaactgttt 45114186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 95 - 193
Target Start/End: Complemental strand, 22999461 - 22999363
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaag 193  Q
    |||||||||||||||||| ||||||||||||  |||||||    |||  ||||||| ||||||||||||||||  |  ||| ||||||||| |||||||    
T  22999461 tttgatttgctaaaaaatgaaggacatgacagaacaactccggttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 22999363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 95 - 197
Target Start/End: Complemental strand, 27104162 - 27104060
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| |||||||  |||  |||||||||  |||  | ||||| ||||||||||||||||  |  ||| ||||||||| ||||||||    
T  27104162 tttgatttgctaaaaaatgaaggacagaacagaacaactctagttgttcaatgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagg 27104063  T
Q  195 gac 197  Q
    |||    
T  27104062 gac 27104060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 95 - 193
Target Start/End: Complemental strand, 37474903 - 37474805
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaag 193  Q
    |||||||||||||||||| ||||| ||||||  ||||||| |  |||  ||||||| ||||||||||||||||  |  ||| ||||||||| |||||||    
T  37474903 tttgatttgctaaaaaatgaaggatatgacagaacaactccagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 37474805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 95 - 197
Target Start/End: Complemental strand, 40389243 - 40389141
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||| ||||| ||||||||||||  ||||||| |  |||  ||||||| ||||||||||||||||  |  ||| ||||||||| |||||| |    
T  40389243 tttgatttgctagaaaatgaaggacatgacagaacaactccagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaag 40389144  T
Q  195 gac 197  Q
    |||    
T  40389143 gac 40389141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 99 - 193
Target Start/End: Complemental strand, 41548817 - 41548723
Alignment:
Q  99 atttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaag 193  Q
    |||||||||||||| ||||||| ||||  ||||||  |  |||  ||||||| ||||||||||||||||  || ||||||||||||| |||||||    
T  41548817 atttgctaaaaaatgaaggacaggacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcagatacatgacaaactggaggcaag 41548723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 246
Target Start/End: Complemental strand, 54322 - 54221
Alignment:
Q  146 tgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagggaccagataaaaacataaa-ttttgtccatcactaaacgacaacacaactt 244  Q
    ||||| |||||||||||||||| ||||||||||||| | | |  ||||||||  || ||||||||||| |||||||| |  |||||| ||| ||||||||    
T  54322 tgtttgatttgtaaaactgtttctgagacatgacaatccggacacaagggacatgacaaaaacataaatttttgtcctttgctaaaccacatcacaactt 54223  T
Q  245 tt 246  Q
    ||    
T  54222 tt 54221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 246
Target Start/End: Original strand, 10656588 - 10656740
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||||| ||  |||||   || |||  ||| ||| ||||||||| || |||| |||||||||||||||  ||||||      
T  10656588 tttgatttgctaaaaaatgaaggacatgtcagaacaacctcaattgtccagtatttgatttgtaaatcttttttagagacatgacaaactagaggcaaaa 10656687  T
Q  195 gaccagataaaaacataa-attttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  ||  |||||||| |||| |||| ||||||||||||||    
T  10656688 gacaggacaaaaactgaattttttgtccttcacaaaaccacaacacaactttt 10656740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 246
Target Start/End: Complemental strand, 15001669 - 15001517
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    ||||||||| |||||||| ||||||| ||||  ||||||  |  |||  ||||||| ||||||||||||||||  | |||| ||||||||| ||||||      
T  15001669 tttgatttgataaaaaatgaaggacaggacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcagggacaggacaaactggaggcaata 15001570  T
Q  195 gaccagataaaaacataaa-ttttgtccatcactaaacgacaacacaactttt 246  Q
    |||   | ||||||  ||| |||||||| |||| |||| ||||||||||||||    
T  15001569 gacagaacaaaaactgaaatttttgtccctcaccaaaccacaacacaactttt 15001517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 167
Target Start/End: Original strand, 32019903 - 32019975
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgttt 167  Q
    |||||||||||||||| | ||||||| ||||  |||||||||  |||  ||||||| ||||||||||||||||    
T  32019903 tttgatttgctaaaaattgaaggacaggacagaacaactctagttgttcagtgtttgatttgtaaaactgttt 32019975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 246
Target Start/End: Original strand, 37618294 - 37618446
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||| ||||| ||||||||||||  ||||||| |  |||   |||||| ||||||||||||||||  |  ||| |||||| || |||||| |    
T  37618294 tttgatttgctagaaaatgaaggacatgacagaacaactccagttgtccggtgtttgatttgtaaaactgtttcaggtacaggacaaattggaggcaaag 37618393  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||||| |||| |||| ||||||||||||||    
T  37618394 gacaggacaaaaactgatatttttgtccctcaccaaaccacaacacaactttt 37618446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 163
Target Start/End: Complemental strand, 38047549 - 38047481
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaact 163  Q
    |||||||||||||||||| ||||||| ||||  |||||||||  |||  ||||||| ||||||||||||    
T  38047549 tttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaact 38047481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 207
Target Start/End: Complemental strand, 6460399 - 6460345
Alignment:
Q  153 tttgtaaaactgtttttgagacatgacaaactgaaggcaagggaccagataaaaa 207  Q
    |||||||| ||||||| |||||||||||| ||| ||||||||||| ||| |||||    
T  6460399 tttgtaaagctgttttagagacatgacaatctggaggcaagggacaagacaaaaa 6460345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 246
Target Start/End: Original strand, 22756364 - 22756465
Alignment:
Q  146 tgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagggaccagataaaaacataaa-ttttgtccatcactaaacgacaacacaactt 244  Q
    ||||| |||||||||||||||| || || | |||||| |  ||||||| ||| ||| ||||||||||| |||| ||| ||| || || ||||||||||||    
T  22756364 tgtttgatttgtaaaactgtttctgggataggacaaatttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 22756463  T
Q  245 tt 246  Q
    ||    
T  22756464 tt 22756465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 246
Target Start/End: Original strand, 29672224 - 29672377
Alignment:
Q  95 tttgatttgcta-aaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaag 193  Q
    |||||||||||  |||||| ||||||| ||||  |||||||||  |||  ||||||| ||| ||||||||||||  |  ||| ||||||||  |||||||    
T  29672224 tttgatttgctttaaaaatgaaggacaagacagaacaactctagttgtccagtgtttgattcgtaaaactgtttcaggtacaggacaaactagaggcaag 29672323  T
Q  194 ggaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    ||||  || ||||||  | | |||||||| |||| |||| ||||||||||||||    
T  29672324 ggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttt 29672377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 246
Target Start/End: Original strand, 37664184 - 37664337
Alignment:
Q  95 tttgatttgctaaaaaa-taaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaag 193  Q
    ||||||||||||||||| | ||||||| ||||  | |||||||  |||  ||||||| ||||||||||||||||  |  ||| ||||||||  |||||||    
T  37664184 tttgatttgctaaaaaaatgaaggacaggacagaataactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactagaggcaag 37664283  T
Q  194 ggaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    ||||  || ||||||  | | |||||||| |||| |||| ||| ||||||||||    
T  37664284 ggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttt 37664337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 184
Target Start/End: Complemental strand, 5892218 - 5892182
Alignment:
Q  148 ttttatttgtaaaactgtttttgagacatgacaaact 184  Q
    |||||||||||||||| |||| |||||||||||||||    
T  5892218 ttttatttgtaaaactattttagagacatgacaaact 5892182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 167
Target Start/End: Complemental strand, 6386779 - 6386707
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgttt 167  Q
    |||||||||||||||||| |||||||  |||| |||||| ||  |||  ||||||| |||| |||||||||||    
T  6386779 tttgatttgctaaaaaatgaaggacaaaacataacaactgtagttgtccagtgtttgatttataaaactgttt 6386707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 246
Target Start/End: Original strand, 10320225 - 10320331
Alignment:
Q  139 tgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagggaccagataaaaacataaatt-ttgtccatcactaaacgacaac 237  Q
    |||||| ||||| ||||||||||| ||||| | |||||||||||||  | ||||||||| | | ||||||| ||||| || ||| |||| |||| |||||    
T  10320225 tgtataatgtttgatttgtaaaaccgttttagggacatgacaaacttga-gcaagggacga-aaaaaaacagaaattcttatccctcaccaaaccacaac 10320322  T
Q  238 acaactttt 246  Q
    |||||||||    
T  10320323 acaactttt 10320331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 95 - 246
Target Start/End: Original strand, 31770484 - 31770636
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||||||||||||||||| |||||||||  |||  ||||||| ||||||||||||||||     ||| ||||||||| ||||||||    
T  31770484 tttgatttgctaaaaaataaaggacatgacataacaactctagttgttcagtgtttgatttgtaaaactgtttcatgtacaagacaaactggaggcaagg 31770583  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||| ||| |||| |||| ||||||||||||||    
T  31770584 gacaggacaaaaactcatatttttatccctcaccaaaccacaacacaactttt 31770636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 95 - 246
Target Start/End: Complemental strand, 32528918 - 32528766
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| |||||||||||| ||||||||||  |||  ||||||| ||||||||||||||||  |  ||| ||||||||| || |||||    
T  32528918 tttgatttgctaaaaaatgaaggacatgacaggacaactctagttgttcagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagacaagg 32528819  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||||| |||| |||| ||||||||||||||    
T  32528818 gacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttt 32528766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 95 - 246
Target Start/End: Complemental strand, 39918710 - 39918558
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||| |||| ||||||||||  |||  ||||||| ||||||||||||||||  || ||| ||||||||| ||||||||    
T  39918710 tttgatttgctaaaaaatgaaggacaggacaagacaactctagttgtccagtgtttgatttgtaaaactgtttcagatacaagacaaactggaggcaagg 39918611  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||||| |||| |||| ||| ||||||||||    
T  39918610 gacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttt 39918558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 95 - 246
Target Start/End: Original strand, 4689591 - 4689743
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||||||||  ||||||  |  |||  ||||||| ||||||||||||||||  |  ||| ||||||||| ||||||||    
T  4689591 tttgatttgctaaaaaatgaaggacatgacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaagg 4689690  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||| | | |||||||| |||| |||| ||||||||||||||    
T  4689691 gacaggacaaaaacacatatttttgtccctcaccaaaccacaacacaactttt 4689743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 95 - 246
Target Start/End: Original strand, 27838967 - 27839118
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    ||||||||| |||||||| ||||||||||||  ||||||| |  |||  ||||||| ||||||||||||||||  |  |||||||||||||||||||| |    
T  27838967 tttgatttgttaaaaaatgaaggacatgacagaacaactccagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaactgaaggcaatg 27839066  T
Q  195 gaccagataaaaacataaa-ttttgtccatcactaaacgacaacacaactttt 246  Q
    |||  ||| |||||||||| |||||||| |||| |||| | || |||||||||    
T  27839067 gacaggat-aaaacataaatttttgtccctcaccaaaccataaaacaactttt 27839118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 95 - 206
Target Start/End: Complemental strand, 41459791 - 41459680
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||||||||  |||||||||  ||| |||| ||| ||||||||||||||||  |  ||| ||||||||| ||||||||    
T  41459791 tttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtttagtatttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagg 41459692  T
Q  195 gaccagataaaa 206  Q
    ||| ||| ||||    
T  41459691 gacaagaaaaaa 41459680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 95 - 246
Target Start/End: Original strand, 7770172 - 7770324
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| |||||||||| |  |||||||||  |||  ||||||| |||||||||| |||||  |  ||| ||||||||| ||||||||    
T  7770172 tttgatttgctaaaaaatgaaggacatgatagaacaactctagttgtccagtgtttgatttgtaaaattgtttcaggtacaggacaaactggaggcaagg 7770271  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||| | | |||||||| |||| |||| ||| ||||||||||    
T  7770272 gacaggacaaaaacacatatttttgtccttcaccaaaccacagcacaactttt 7770324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 95 - 246
Target Start/End: Complemental strand, 11963544 - 11963392
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||| ||||  |||||||||  |||  ||||||| ||||||||||||||||  |  ||| ||||||||| ||||||||    
T  11963544 tttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagg 11963445  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||||| |||| |||| ||| ||||||||||    
T  11963444 gacatgacaaaaactcatatttttgtccctcaccaaaccacagcacaactttt 11963392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 95 - 246
Target Start/End: Complemental strand, 35701480 - 35701328
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||| || |  |||||||||  |||  ||||||| |||||||||||||||| ||  ||| ||||||||| ||||||||    
T  35701480 tttgatttgctaaaaaatgaaggacaagatagaacaactctagttgtccagtgtttgatttgtaaaactgtttctggtacaggacaaactggaggcaagg 35701381  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||||| |||| |||| |||||| |||||||    
T  35701380 gacaggacaaaaactcatatttttgtccctcaccaaaccacaacataactttt 35701328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 197
Target Start/End: Original strand, 24181517 - 24181619
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||||||||  |||||||||  |||  ||||||| ||||||||||||||||  |  ||| ||||||||| || |||||    
T  24181517 tttgatttgctaaaaaatgaaggacatgacaaaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagccaagg 24181616  T
Q  195 gac 197  Q
    |||    
T  24181617 gac 24181619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 167
Target Start/End: Complemental strand, 2351883 - 2351811
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgttt 167  Q
    |||||||||||||||||| ||||||| |||| ||||||||||  |||  ||||||| ||||||||||||||||    
T  2351883 tttgatttgctaaaaaatgaaggacaggacaggacaactctagttgttcagtgtttgatttgtaaaactgttt 2351811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 246
Target Start/End: Complemental strand, 8137040 - 8136888
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||| | ||||  |||||||||  |||  |||||||  |||||||||||||||  || ||| ||||||||| |||||||     
T  8137040 tttgatttgctaaaaaatgaaggataggacagaacaactctagttgtccagtgtttgttttgtaaaactgtttcagatacaggacaaactggaggcaaga 8136941  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||||| |||| |||| ||||||||||||||    
T  8136940 gacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttt 8136888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 246
Target Start/End: Original strand, 18470321 - 18470473
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    ||||||||| |||||||| ||||||| ||||  ||||||| |  | |  ||||||| ||||||||||||||||  | ||||  |||||||||||||||||    
T  18470321 tttgatttgttaaaaaatgaaggacaagacagaacaactccagttatccagtgtttgatttgtaaaactgtttcagggacagaacaaactgaaggcaagg 18470420  T
Q  195 gaccagataaaaacataaa-ttttgtccatcactaaacgacaacacaactttt 246  Q
    ||| ||| ||||||  ||| |||||||| | || |||| ||| ||||||||||    
T  18470421 gacaagacaaaaactgaaatttttgtcccttaccaaaccacagcacaactttt 18470473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 95 - 246
Target Start/End: Complemental strand, 553600 - 553448
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||| | ||||||  |||||| ||| ||| |||||||| |||| |||||||||||     ||| ||||||||| |||||||     
T  553600 tttgatttgctaaaaaatgaagaatatgacagaacaactttaattgtctagtgtttgatttataaaactgtttcaagtacaggacaaactggaggcaaga 553501  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    ||| ||| ||||||  | | |||||||  |||| |||| ||||||||||||||    
T  553500 gacaagacaaaaactcatatttttgtctctcaccaaaccacaacacaactttt 553448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 95 - 246
Target Start/End: Complemental strand, 3735560 - 3735408
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||| ||||||||  ||||||| |  |||  ||||||| ||||||||||| ||||  |  |||||||||| || |||||| |    
T  3735560 tttgatttgctaaaaaatgaagaacatgacagaacaactccagttgtccagtgtttgatttgtaaaaccgtttcaggtacatgacaaaatggaggcaatg 3735461  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | ||||||||||||| |||| ||| ||||||||||    
T  3735460 gacaggacaaaaactgatatttttgtccatcaccaaaccacagcacaactttt 3735408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 95 - 246
Target Start/End: Complemental strand, 7523375 - 7523223
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||| | ||||  |||| ||||  |||  ||||||| ||||||||||||||||  |  ||| ||||||||| ||||||||    
T  7523375 tttgatttgctaaaaaatgaaggataggacagaacaattctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagg 7523276  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||||| |||| |||| ||| ||||||||||    
T  7523275 gacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttt 7523223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 95 - 197
Target Start/End: Complemental strand, 29241581 - 29241479
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| |||| || | ||  |||||||||  |||  ||||||| ||||||||||||||||  |  |||||||||| || ||||||||    
T  29241581 tttgatttgctaaaaaatgaaggccaggccagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaattggaggcaagg 29241482  T
Q  195 gac 197  Q
    |||    
T  29241481 gac 29241479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 95 - 193
Target Start/End: Original strand, 31879969 - 31880067
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaag 193  Q
    |||||||||||||||||| ||||||| || || |||||||||  |||  ||||||| ||| ||||||||||||  |  ||| ||||||||| |||||||    
T  31879969 tttgatttgctaaaaaatgaaggacaagatataacaactctagttgttcagtgtttgattagtaaaactgtttcaggtacaggacaaactggaggcaag 31880067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 95 - 197
Target Start/End: Complemental strand, 40489539 - 40489438
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||||| ||||| ||||  | |||||||| |||  ||||||| ||||||||||||||||  |  | | ||||||||| ||||||||    
T  40489539 tttgatttgctaaaaaataa-ggacaggacagaataactctaattgttcagtgtttgatttgtaaaactgtttcaggtagaagacaaactggaggcaagg 40489441  T
Q  195 gac 197  Q
    |||    
T  40489440 gac 40489438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 208
Target Start/End: Original strand, 8560875 - 8560988
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||  |||||| |||||| ||||||  |  | |  ||||||| ||||||||||||||||  || ||| ||||||||||| |||| |    
T  8560875 tttgatttgctaaaaaacgaaggacgtgacataacaacttcagttattcagtgtttgatttgtaaaactgtttcagatacaggacaaactgaaagcaaag 8560974  T
Q  195 gaccagataaaaac 208  Q
    ||| ||| ||||||    
T  8560975 gacaagacaaaaac 8560988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 217
Target Start/End: Complemental strand, 17031350 - 17031238
Alignment:
Q  105 taaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagggaccagataa 204  Q
    |||||||| ||||||| ||||  ||||||| |  |||||| ||||| ||||||||||||||||  | ||||  ||||| || |||||| ||||  || ||    
T  17031350 taaaaaatgaaggacaagacaacacaactccacttgtataatgtttgatttgtaaaactgtttcagggacagtacaaattggaggcaaaggacaggacaa 17031251  T
Q  205 aaacataaatttt 217  Q
    |||||||||||||    
T  17031250 aaacataaatttt 17031238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 246
Target Start/End: Original strand, 23091197 - 23091349
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| || |||| || || || |||| |  |||  ||||||| ||||||||||||||||  |  ||| || |||||| ||||||||    
T  23091197 tttgatttgctaaaaaatgaatgacaagatataactactcaagttgtccagtgtttgatttgtaaaactgtttcaggtacaggataaactggaggcaagg 23091296  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    ||| ||| ||||||  | | |||||||| |||  |||| ||||||||||||||    
T  23091297 gacaagacaaaaactcatatttttgtccgtcatcaaaccacaacacaactttt 23091349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 246
Target Start/End: Complemental strand, 34795090 - 34794938
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    ||||||||| |||||||| ||||||||||||  |||||||||  |||  | | ||| ||||||||||||||||  |  ||| ||||||||  ||||||||    
T  34795090 tttgatttgttaaaaaatgaaggacatgacagaacaactctagttgtccaatatttgatttgtaaaactgtttcaggtacaggacaaactagaggcaagg 34794991  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||||| |||| |||| ||| ||||||||||    
T  34794990 gacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttt 34794938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 246
Target Start/End: Complemental strand, 39788396 - 39788244
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    ||||||||| |||||||||||||||| ||||  |||| ||||  |||  ||| ||| ||||||||||||||||  |  ||| ||||||||| |||||| |    
T  39788396 tttgatttgttaaaaaataaaggacaggacagaacaattctagttgtccagtatttgatttgtaaaactgtttcaggtacaggacaaactgtaggcaaag 39788297  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||||| |||| |||| ||| ||||||||||    
T  39788296 gacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttt 39788244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 7208120 - 7208195
Alignment:
Q  92 gcatttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgttt 167  Q
    ||||||||||||||||||||| |||||||  |||  |||||| ||  |||  ||||||| ||||||||||||||||    
T  7208120 gcatttgatttgctaaaaaatgaaggacagaacagaacaactttagttgtccagtgtttgatttgtaaaactgttt 7208195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 197
Target Start/End: Original strand, 37148482 - 37148584
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    ||||||||| |||||||| ||||| ||||||  ||||||| |  |||  | ||||| ||||||||||||||||  | ||||  |||||||| ||||||||    
T  37148482 tttgatttgttaaaaaatgaaggatatgacagaacaactccagttgtcaattgtttgatttgtaaaactgtttcagggacagaacaaactggaggcaagg 37148581  T
Q  195 gac 197  Q
    |||    
T  37148582 gac 37148584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 184
Target Start/End: Original strand, 11090762 - 11090850
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaact 184  Q
    ||||||||| |||||||||| ||| | || |||||||||  || ||||  |||||| |||||||||| ||||||||  ||||||||||||    
T  11090762 tttgatttgttaaaaaataa-ggataggatatgacaacttcaattgtaaggtgtttaatttgtaaaattgtttttggaacatgacaaact 11090850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 92 - 241
Target Start/End: Original strand, 7348 - 7498
Alignment:
Q  92 gcatttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggca 191  Q
    ||||||||| |||||||| ||||||||||||||||||  |||| |  |||||| | |||||||||||||||| |||| |||| |||| |||| |||||||    
T  7348 gcatttgatctgctaaaacataaaggacatgacatgatgactccagttgtataattttttatttgtaaaactcttttagagatatgagaaaccgaaggca 7447  T
Q  192 agggaccagataaaaacataaatt-ttgtccatcactaaacgacaacacaa 241  Q
    || ||| ||| ||||||  ||||| |||||  ||||||||  |||||||||    
T  7448 agtgactagacaaaaactgaaattcttgtctctcactaaatcacaacacaa 7498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 2e-20; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 95 - 197
Target Start/End: Original strand, 3695188 - 3695290
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||| ||||  |||||||||  |||  ||||||| ||||||||||||||||| |  ||||||||||||| ||||||||    
T  3695188 tttgatttgctaaaaaatgaaggacaggacaaaacaactctagttgtccagtgtttgatttgtaaaactgttttaggtacatgacaaactggaggcaagg 3695287  T
Q  195 gac 197  Q
    |||    
T  3695288 gac 3695290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 95 - 246
Target Start/End: Complemental strand, 29585079 - 29584927
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||||||||||| ||||  |||||||||  |||  ||||||| ||||||||||||||||  |  ||| ||||||||| |||||||     
T  29585079 tttgatttgctaaaaaataaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagt 29584980  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||||| |||| |||| ||||||||||||||    
T  29584979 gacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttt 29584927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 97 - 246
Target Start/End: Complemental strand, 44000462 - 44000313
Alignment:
Q  97 tgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaaggga 196  Q
    |||||||||||||| | || ||||||||||||||||||||  ||||  |||||| ||||||||||||||||||| || |||| ||||| ||||||| |||    
T  44000462 tgatttgctaaaaa-tgaatgacatgacatgacaactctagttgtaccgtgtttcatttgtaaaactgtttttgggaaatgataaactcaaggcaaagga 44000364  T
Q  197 ccagataaaaacataa-attttgtccatcactaaacgacaacacaactttt 246  Q
    |  || ||||||| ||  |||| ||| ||||||||| ||| ||||| ||||    
T  44000363 catgacaaaaacagaattttttttccctcactaaaccacatcacaattttt 44000313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 95 - 197
Target Start/End: Original strand, 51259661 - 51259763
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||||||||  |||||||||  |||  ||||||| ||||||||||||||||  |  ||| ||||||||| ||||||||    
T  51259661 tttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagg 51259760  T
Q  195 gac 197  Q
    |||    
T  51259761 gac 51259763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 95 - 246
Target Start/End: Complemental strand, 24571485 - 24571333
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||| ||||  |||||||||  |||  ||||||| ||||||||||||||||  |  ||| ||||||||| ||||||||    
T  24571485 tttgatttgctaaaaaatgaaggacaggacaaaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaagg 24571386  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||||| |||| |||| ||| ||||||||||    
T  24571385 gacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttt 24571333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 95 - 167
Target Start/End: Complemental strand, 26847531 - 26847459
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgttt 167  Q
    |||||||||||||||||| ||| | ||||||||||||||| |  |||||||||||| ||||||||||||||||    
T  26847531 tttgatttgctaaaaaatgaagcatatgacatgacaactccacttgtatagtgtttaatttgtaaaactgttt 26847459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 95 - 194
Target Start/End: Complemental strand, 20255248 - 20255149
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||||||||  |||||||||  |||  ||||||| ||||||||||||||||  |  ||| ||||||||| ||||||||    
T  20255248 tttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagg 20255149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 197
Target Start/End: Complemental strand, 5442483 - 5442381
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||||||||  |||||||||  |||  ||||||| ||||||||| ||||||  |  ||| ||||||||| ||||||||    
T  5442483 tttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtccagtgtttgatttgtaaagctgtttcaggtacaagacaaactggaggcaagg 5442384  T
Q  195 gac 197  Q
    |||    
T  5442383 gac 5442381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 197
Target Start/End: Original strand, 12349052 - 12349154
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||| ||||| ||||||| |  |||  ||||||| ||||||||||||||||  |  ||| ||||||||| ||||||||    
T  12349052 tttgatttgctaaaaaatgaaggacaggacataacaactccagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagg 12349151  T
Q  195 gac 197  Q
    |||    
T  12349152 gac 12349154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 92 - 197
Target Start/End: Original strand, 42636281 - 42636386
Alignment:
Q  92 gcatttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggca 191  Q
    ||||||||||||||||||||| ||||||| ||||  |||| ||||  |||  ||||||| ||||||||||||||||| |  | | ||||||||| |||||    
T  42636281 gcatttgatttgctaaaaaatgaaggacaggacagaacaattctagttgtccagtgtttgatttgtaaaactgttttaggtataggacaaactggaggca 42636380  T
Q  192 agggac 197  Q
    ||||||    
T  42636381 agggac 42636386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 92 - 197
Target Start/End: Original strand, 53557673 - 53557778
Alignment:
Q  92 gcatttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggca 191  Q
    ||||||||||||||||||||||||||| ||||||   ||||||||  |||  | ||||| ||||||||||||||||| |  ||| ||||||||| |||||    
T  53557673 gcatttgatttgctaaaaaataaaggatatgacagagcaactctagttgttcaatgtttgatttgtaaaactgttttaggtacaggacaaactggaggca 53557772  T
Q  192 agggac 197  Q
    | ||||    
T  53557773 atggac 53557778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 246
Target Start/End: Original strand, 39052719 - 39052871
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| || |||| ||||  |||||||||  ||| |||||||| ||||||||||||||||  |  ||| ||||||||| |||||| |    
T  39052719 tttgatttgctaaaaaatgaaagacaagacaaaacaactctagttgtctagtgtttgatttgtaaaactgtttcaggcacaggacaaactggaggcaatg 39052818  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||||  |||| |||| ||||||||||||||    
T  39052819 gacaggacaaaaactcatatttttgtctctcaccaaaccacaacacaactttt 39052871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 246
Target Start/End: Complemental strand, 40094707 - 40094555
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||| ||||  |||||||||  |||  ||||||| ||||||||||||||||  |  |||  |||||||| ||||||||    
T  40094707 tttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacagaacaaactggaggcaagg 40094608  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||||| |||| |||| ||| ||||||||||    
T  40094607 gacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttt 40094555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 246
Target Start/End: Complemental strand, 29646273 - 29646118
Alignment:
Q  92 gcatttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggca 191  Q
    ||||||||||| ||||||||| ||||||| ||||  |||| || |  |||  ||||||| ||||||||||||||||| |  ||| || |||||| |||||    
T  29646273 gcatttgattttctaaaaaatgaaggacaagacaaaacaattccagttgttcagtgtttgatttgtaaaactgttttaggtacacgataaactggaggca 29646174  T
Q  192 agggaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||||   || ||||||||| | |||||||| |||| |||| ||| ||||||||||    
T  29646173 agggataggacaaaaacatatatttttgtccctcaccaaaccacatcacaactttt 29646118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 197
Target Start/End: Original strand, 1344588 - 1344690
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||| ||||  |||||||||  |||  ||||||| |||||||||||| |||  |  ||| ||||||||| ||||||||    
T  1344588 tttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactatttcaggtacaggacaaactggaggcaagg 1344687  T
Q  195 gac 197  Q
    |||    
T  1344688 gac 1344690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 197
Target Start/End: Complemental strand, 2135274 - 2135172
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||| ||||  |||||||||  |||  ||||||| ||||||||||||||||  |  ||| ||||||||  ||||||||    
T  2135274 tttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactagaggcaagg 2135175  T
Q  195 gac 197  Q
    |||    
T  2135174 gac 2135172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 197
Target Start/End: Original strand, 22484624 - 22484726
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    ||||||||| |||||||| ||||||| ||||  ||||||| || |||  |||| || ||||||||||| ||||  | |||||||||||||| ||||||||    
T  22484624 tttgatttgataaaaaatgaaggacaggacagaacaactccaattgtccagtgattgatttgtaaaacagtttcagggacatgacaaactggaggcaagg 22484723  T
Q  195 gac 197  Q
    |||    
T  22484724 gac 22484726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 197
Target Start/End: Original strand, 25927208 - 25927310
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| | ||||| ||||  |||||||||  ||| || ||||| ||||||||||||||||   | ||| ||||||||| ||||||||    
T  25927208 tttgatttgctaaaaaatgatggacaggacagaacaactctagttgtctaatgtttgatttgtaaaactgtttcaaatacaggacaaactggaggcaagg 25927307  T
Q  195 gac 197  Q
    |||    
T  25927308 gac 25927310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 193
Target Start/End: Original strand, 31882903 - 31883001
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaag 193  Q
    |||||||||||||||||| ||||||||||||  ||||||| |  |||  ||||||| ||||||||||||||||  |  ||| ||||||||| |||||||    
T  31882903 tttgatttgctaaaaaatgaaggacatgacagaacaactccagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 31883001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 193
Target Start/End: Original strand, 50386337 - 50386435
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaag 193  Q
    |||||||||||||||||| ||||||| ||||  ||||||| |  ||| |||||||| ||||||||||||||||  |  ||| ||||||||| |||||||    
T  50386337 tttgatttgctaaaaaatgaaggacaggacagaacaactccagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 50386435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 95 - 246
Target Start/End: Original strand, 21221242 - 21221393
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||||||||||| ||||  |||||||||  |||  | | ||| ||||||||||||||||  |  ||| ||| ||||| ||||||||    
T  21221242 tttgatttgctaaaaaataaaggacaggacagaacaactctagttgtccaatatttgatttgtaaaactgtttcaggtacaggac-aactggaggcaagg 21221340  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||||| |||| |||| ||||||||||||||    
T  21221341 gacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttt 21221393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 99 - 246
Target Start/End: Complemental strand, 34026867 - 34026719
Alignment:
Q  99 atttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagggacc 198  Q
    |||||||||||||| ||||||| ||||  |||||||||  |||  ||||||| ||||||||||||||||  |  | | ||||||||| |||||||||||     
T  34026867 atttgctaaaaaatgaaggacaggacagaacaactctatttgttcagtgtttgatttgtaaaactgtttcaggtataggacaaactggaggcaagggaca 34026768  T
Q  199 agataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
     || ||||||  | | |||||||| |||| |||| ||||||||| ||||    
T  34026767 tgacaaaaactcatatttttgtccctcaccaaaccacaacacaattttt 34026719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 95 - 246
Target Start/End: Original strand, 51925089 - 51925241
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||| ||||| ||||| | ||||  ||||||| |  |||  ||||||| ||||||||||||||||  |  ||||||||||||| |||||| |    
T  51925089 tttgatttgctagaaaatgaaggataggacagaacaactccagttgtccagtgtttaatttgtaaaactgtttcaggtacatgacaaactggaggcaaag 51925188  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||||| |||| |||| ||||||||||||||    
T  51925189 gacaggacaaaaactgatatttttgtccctcaccaaaccacaacacaactttt 51925241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 105 - 246
Target Start/End: Original strand, 25860312 - 25860454
Alignment:
Q  105 taaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagggaccagataa 204  Q
    |||||||| |||||| |||||  |||||||||  |||  ||||||| ||||||||||||||||  |  ||| ||||||||| |||||||||||  || ||    
T  25860312 taaaaaatgaaggacttgacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacatgacaa 25860411  T
Q  205 aaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    ||||  | | |||||||| |||| |||| ||| ||||||||||    
T  25860412 aaactcatatttttgtccctcaccaaaccacatcacaactttt 25860454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 95 - 193
Target Start/End: Original strand, 33364659 - 33364757
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaag 193  Q
    |||||||||||||||||| ||||||| ||||  ||||||  |  |||  ||||||||||||||||||||||||  |  ||| ||||||||| |||||||    
T  33364659 tttgatttgctaaaaaatgaaggacaagacagaacaacttcagttgtccagtgttttatttgtaaaactgtttcaggtacaggacaaactggaggcaag 33364757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 95 - 197
Target Start/End: Complemental strand, 44117143 - 44117041
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||  ||||  |||||||||  |||  ||||||| ||||||||||| ||||  |  ||| ||||||||| ||||||||    
T  44117143 tttgatttgctaaaaaatgaaggactggacagaacaactctagttgtccagtgtttgatttgtaaaaccgtttcaggtacaggacaaactggaggcaagg 44117044  T
Q  195 gac 197  Q
    |||    
T  44117043 gac 44117041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 208
Target Start/End: Original strand, 41682934 - 41683047
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||| ||||  ||||||  |  |||  ||||||| ||||||||||||||||  |  ||| ||||||||| |||||||     
T  41682934 tttgatttgctaaaaaatgaaggacaggacaaaacaacttcagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaga 41683033  T
Q  195 gaccagataaaaac 208  Q
    ||| ||| ||||||    
T  41683034 gacaagacaaaaac 41683047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 246
Target Start/End: Complemental strand, 21374134 - 21373982
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||| ||||||||||||| ||| | ||||||| ||||||  |  ||| |||||||| ||||||||||||||||  |  ||| ||||||||  ||||||||    
T  21374134 tttggtttgctaaaaaatgaagaaaatgacataacaacttcagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaacttgaggcaagg 21374035  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || |||| |  | | |||||||| |||| |||| ||||||||||||||    
T  21374034 gacaggacaaaatctcatatttttgtccctcaccaaaccacaacacaactttt 21373982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 167
Target Start/End: Complemental strand, 24721685 - 24721617
Alignment:
Q  99 atttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgttt 167  Q
    ||||| |||||||| ||||||||||||  |||||||||  |||  ||||||| ||||||||||||||||    
T  24721685 atttgttaaaaaatgaaggacatgacagaacaactctagttgttcagtgtttgatttgtaaaactgttt 24721617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 246
Target Start/End: Complemental strand, 28675994 - 28675842
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    ||||||||| |||||||| ||| ||| ||||  |||| ||||  |||  ||||||| ||||||||||||||||  |  ||| ||||||||| ||||||||    
T  28675994 tttgatttgttaaaaaatgaagaacaggacagaacaattctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagg 28675895  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    ||   || ||||||  | | |||||||| |||| |||| ||||||||||||||    
T  28675894 gataggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttt 28675842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 246
Target Start/End: Original strand, 49748792 - 49748944
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||| ||||| ||||| | || |  ||||||| |  ||| |||||||| ||||||||||||||||  |  ||| ||||||||| |||||| |    
T  49748792 tttgatttgctagaaaatgaaggataggatagaacaactcaagttgtttagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaag 49748891  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||||| |||| |||| ||||||||||||||    
T  49748892 gacatgacaaaaactgatatttttgtccctcaccaaaccacaacacaactttt 49748944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 181
Target Start/End: Complemental strand, 25395821 - 25395733
Alignment:
Q  92 gcatttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaa 181  Q
    |||||||||||||||| |||||||  |||||| || ||||||| |  |||| |  |||||| ||||||||||||||| | ||||||||||    
T  25395821 gcatttgatttgctaagaaataaatcacatgatataacaactccagttgtacatcgtttta-ttgtaaaactgttttagggacatgacaa 25395733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 125
Target Start/End: Original strand, 54622675 - 54622708
Alignment:
Q  92 gcatttgatttgctaaaaaataaaggacatgaca 125  Q
    ||||||||||||||||||||| ||||||||||||    
T  54622675 gcatttgatttgctaaaaaatgaaggacatgaca 54622708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 246
Target Start/End: Complemental strand, 3964492 - 3964340
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    ||||||||| |||||||| ||||| | ||||  ||||||  |  |||  ||||||| ||||||||||||||||    ||||||||||| || ||||||||    
T  3964492 tttgatttgataaaaaatgaaggataggacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcatggacatgacaaattggaggcaagg 3964393  T
Q  195 gaccagataaaaacataaa-ttttgtccatcactaaacgacaacacaactttt 246  Q
     ||  || ||||||  ||| |||||||| |||| |||| ||| ||||||||||    
T  3964392 aactggacaaaaactgaaatttttgtccctcaccaaaccacagcacaactttt 3964340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 163
Target Start/End: Complemental strand, 43175679 - 43175611
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaact 163  Q
    |||||||||||||||||| |||||||  |||  |||||||||  |||  ||||||| ||||||||||||    
T  43175679 tttgatttgctaaaaaatgaaggacagaacagaacaactctagttgtccagtgtttgatttgtaaaact 43175611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 246
Target Start/End: Complemental strand, 51296783 - 51296633
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||| ||||| |||  |||  |||||||||| |||  ||||||| ||||||||||||||||  |  ||| ||||||||| |||||| |    
T  51296783 tttgatttgctaaaaa-taaag-acagaacagaacaactctaattgtccagtgtttaatttgtaaaactgtttcaggtacaggacaaactggaggcaaag 51296686  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||||| |||| |||| ||||||||| ||||    
T  51296685 gacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaattttt 51296633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 4e-19; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 95 - 246
Target Start/End: Complemental strand, 51264707 - 51264555
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||| ||||  | |||||||  |||  ||||||| ||||||||||||||||  |  ||| ||||||||| ||||||||    
T  51264707 tttgatttgctaaaaaatgaaggacaagacagaataactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagg 51264608  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    ||| ||| ||||||  | | |||||||| |||| |||| ||||||||||||||    
T  51264607 gacaagacaaaaactcatatttttgtccctcaccaaaccacaacacaactttt 51264555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 95 - 197
Target Start/End: Original strand, 24339600 - 24339702
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||||||||||| ||||  |||||||||  |||  ||||||| ||||||| ||||||||  |  ||||||||||||| ||||||||    
T  24339600 tttgatttgctaaaaaataaaggacaggacagaacaactctagttgttcagtgtttgatttgtataactgtttcaggtacatgacaaactggaggcaagg 24339699  T
Q  195 gac 197  Q
    |||    
T  24339700 gac 24339702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 99 - 185
Target Start/End: Original strand, 47242482 - 47242568
Alignment:
Q  99 atttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactg 185  Q
    ||||||||||||||||| |||||||||||||||||  |  ||||| |||||| |||||||||| ||||| || ||||||||||||||    
T  47242482 atttgctaaaaaataaatgacatgacatgacaacttcagttgtatggtgtttaatttgtaaaattgtttatgggacatgacaaactg 47242568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 95 - 246
Target Start/End: Original strand, 1351397 - 1351549
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||| ||||  |||||||||  |||  ||||||| ||||||||||||||||  |  ||| ||||||||| ||||||||    
T  1351397 tttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagg 1351496  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
     ||  || ||||||  | | |||||||| |||| |||| ||||||||||||||    
T  1351497 aacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttt 1351549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 97 - 197
Target Start/End: Original strand, 26118179 - 26118279
Alignment:
Q  97 tgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaaggga 196  Q
    |||||||||||||||| ||||||||||||| |||||||||  |||  ||||||| ||||||||||||||||  |  ||| ||||||||| |||||| |||    
T  26118179 tgatttgctaaaaaatgaaggacatgacataacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaagga 26118278  T
Q  197 c 197  Q
    |    
T  26118279 c 26118279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 95 - 246
Target Start/End: Original strand, 32289306 - 32289458
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||| ||||  |||||||||  |||  ||||||| ||||||||||||||||  |  ||| |||||| || ||||||||    
T  32289306 tttgatttgctaaaaaatgaaggacaagacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaattggaggcaagg 32289405  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    ||| ||| ||||||  | | |||||||| |||| |||| ||| ||||||||||    
T  32289406 gacaagacaaaaactcatatttttgtccctcaccaaaccacagcacaactttt 32289458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 95 - 246
Target Start/End: Original strand, 35387273 - 35387425
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||||||||  |||||||||  |||  ||||||| ||||||||||||||||  |  ||| ||||||||| ||| ||||    
T  35387273 tttgatttgctaaaaaatgaaggacatgacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggtaagg 35387372  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||||| |||| |||| ||| ||||||||||    
T  35387373 gacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttt 35387425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 246
Target Start/End: Complemental strand, 17888163 - 17888008
Alignment:
Q  92 gcatttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggca 191  Q
    ||||||||||||||||||||| || |||||||||  |||||||||  |||   |||||| ||||||||||||||||  |  ||| ||||||||| |||||    
T  17888163 gcatttgatttgctaaaaaatgaatgacatgacaaaacaactctagttgtccggtgtttgatttgtaaaactgtttcaggtacaagacaaactggaggca 17888064  T
Q  192 agggaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    ||||||  || ||||||  | | |||||||| || | |||| ||||||||||||||    
T  17888063 agggacaggacaaaaactcatatttttgtccctcgccaaaccacaacacaactttt 17888008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 197
Target Start/End: Complemental strand, 41973123 - 41973021
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||| || |  |||||||||  |||  ||||||| ||||||||||||||||  || ||| ||||||||| ||||||||    
T  41973123 tttgatttgctaaaaaatgaaggacaggatagaacaactctagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaagg 41973024  T
Q  195 gac 197  Q
    |||    
T  41973023 gac 41973021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 95 - 208
Target Start/End: Original strand, 49303316 - 49303429
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||||||| ||| ||||  |||||||||| |||  ||||||| ||||||||||||||||  |  | | ||||||||| || |||||    
T  49303316 tttgatttgctaaaaaataaagtacaagacaaaacaactctaattgtccagtgtttgatttgtaaaactgtttcaggtataagacaaactggagacaagg 49303415  T
Q  195 gaccagataaaaac 208  Q
    ||| ||| ||||||    
T  49303416 gacaagagaaaaac 49303429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 246
Target Start/End: Original strand, 844686 - 844838
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||| ||||  |||||||||  |||  ||||||| ||||||||||||||||  |  ||| ||||||||  ||||||||    
T  844686 tttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactagaggcaagg 844785  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||||| |||| |||| ||| ||||||||||    
T  844786 gacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttt 844838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 246
Target Start/End: Original strand, 6711008 - 6711160
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||| ||||  |||||||||  |||  ||||||| ||||||||||||||||  |  ||| ||||||||  ||||||||    
T  6711008 tttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactagaggcaagg 6711107  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||||| |||| |||| ||||||||| ||||    
T  6711108 gacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaattttt 6711160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 246
Target Start/End: Complemental strand, 16451339 - 16451187
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    ||||||||| |||||||| ||||||| ||||| |||||||||  |||  | ||||| ||||||||||||||||  |  ||| ||||||||| ||||||||    
T  16451339 tttgatttgttaaaaaatgaaggacaggacataacaactctagttgtccaatgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagg 16451240  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||||  |||| |||| ||||||||||||||    
T  16451239 gacaggacaaaaactcatatttttgtctctcaccaaaccacaacacaactttt 16451187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 246
Target Start/End: Complemental strand, 32270565 - 32270413
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||| ||||  |||||||||  |||  ||||||| ||||||||||||||||  |  | | ||||||||| ||||||||    
T  32270565 tttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtagaggacaaactggaggcaagg 32270466  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||||| |||| |||| ||| ||||||||||    
T  32270465 gacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttt 32270413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 144 - 246
Target Start/End: Original strand, 6029312 - 6029415
Alignment:
Q  144 agtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagggaccagataaaaacataaa-ttttgtccatcactaaacgacaacacaac 242  Q
    ||||||| ||||||||||||||||  | ||||  ||||||||||||||||||||  || ||||||  ||| |||||||| |||| |||| ||||||||||    
T  6029312 agtgtttgatttgtaaaactgtttcagggacagaacaaactgaaggcaagggacaggacaaaaactgaaatttttgtccctcaccaaaccacaacacaac 6029411  T
Q  243 tttt 246  Q
    ||||    
T  6029412 tttt 6029415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 197
Target Start/End: Original strand, 17327611 - 17327713
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||| ||||  |||||||||  |||  ||||||| ||||||||||||||||  |  ||| ||||||||| || |||||    
T  17327611 tttgatttgctaaaaaatgaaggacaagacaaaacaactctagttgtccagtgtttaatttgtaaaactgtttcaggtacaggacaaactggagtcaagg 17327710  T
Q  195 gac 197  Q
    |||    
T  17327711 gac 17327713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 197
Target Start/End: Complemental strand, 42510737 - 42510635
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||| |||| ||||||||||  |||  ||||||| ||| ||||||||||||  |  ||| ||||||||| || |||||    
T  42510737 tttgatttgctaaaaaatgaaggacaggacaggacaactctagttgtccagtgtttgattcgtaaaactgtttcaggtacaggacaaactggagacaagg 42510638  T
Q  195 gac 197  Q
    |||    
T  42510637 gac 42510635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 161
Target Start/End: Complemental strand, 46155119 - 46155053
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaa 161  Q
    |||||||||||||||||| ||||||||||||  |||||||||| |||  ||||||| ||||||||||    
T  46155119 tttgatttgctaaaaaatgaaggacatgacagaacaactctaattgttcagtgtttgatttgtaaaa 46155053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 197
Target Start/End: Complemental strand, 50540556 - 50540454
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    ||||||||||||||||| ||||||||  |||  ||| |||||  |||  ||||||| ||||||||||||||||| |  ||| ||||||||| ||||||||    
T  50540556 tttgatttgctaaaaaagaaaggacagaacaaaacagctctagttgtccagtgtttgatttgtaaaactgttttaggtacaggacaaactggaggcaagg 50540457  T
Q  195 gac 197  Q
    |||    
T  50540456 gac 50540454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 208
Target Start/End: Original strand, 28340266 - 28340378
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||||| ||||| || |  |||||||||  |||  ||||||| ||||||||||||||||  |  ||| ||||||||| ||||||||    
T  28340266 tttgatttgctaaaaaataa-ggacaggatagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaagg 28340364  T
Q  195 gaccagataaaaac 208  Q
    ||| ||| ||||||    
T  28340365 gacaagacaaaaac 28340378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 95 - 246
Target Start/End: Original strand, 26764757 - 26764909
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    ||||||||||||||||||||| |||||||||  ||||||| |  |||  ||||||| ||||||| || |||||| |  ||| || |||||| |||||| |    
T  26764757 tttgatttgctaaaaaataaaagacatgacagaacaactccagttgtccagtgtttgatttgtacaattgttttaggtacaagataaactggaggcaaag 26764856  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || |||||| || | |||||||| ||||  ||| ||||||||||||||    
T  26764857 gacaggacaaaaacttatatttttgtccctcaccgaaccacaacacaactttt 26764909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 95 - 246
Target Start/End: Original strand, 42705199 - 42705352
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||| ||||||||||| | ||| ||| |||||||| | |||  ||||||| ||||||||||||||||  |  ||| ||||||||| || |||||    
T  42705199 tttgatttgcgaaaaaataaagaatatgtcataacaactctgattgttcagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagacaagg 42705298  T
Q  195 gaccagataaaaa---cataaattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || |||||   ||| | |||||||| |||| |||| ||||||||||||||    
T  42705299 gacgggaaaaaaaactcat-atttttgtccctcaccaaaccacaacacaactttt 42705352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 95 - 246
Target Start/End: Original strand, 45490837 - 45490989
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| || |||| ||||  |||| ||||  |||  ||||||| ||||||||||||||||     ||| ||||||||| ||||||||    
T  45490837 tttgatttgctaaaaaatgaaagacaggacagaacaattctagttgtccagtgtttgatttgtaaaactgtttcaagtacaggacaaactggaggcaagg 45490936  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||||| |||| |||| ||||||||||||||    
T  45490937 gacatgacaaaaactcatatttttgtccctcaccaaaccacaacacaactttt 45490989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 217
Target Start/End: Complemental strand, 4895542 - 4895451
Alignment:
Q  126 tgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagggaccagataaaaacataaatttt 217  Q
    ||||||||  ||||||| | ||||| ||||||||||||||||||  |||  ||||||| ||||||||| ||| ||| |||||||||| ||||    
T  4895542 tgacaacttcaactgtacaatgtttgatttgtaaaactgtttttaggacgagacaaacggaaggcaagagacaagacaaaaacataattttt 4895451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 95 - 185
Target Start/End: Complemental strand, 8839109 - 8839019
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactg 185  Q
    |||||||||||||||||| ||||||| ||||  ||||||| || |||  | ||||| |||||||||||||||| ||  ||| |||||||||    
T  8839109 tttgatttgctaaaaaatgaaggacaagacagaacaactccaattgtccaatgtttgatttgtaaaactgtttctggtacaagacaaactg 8839019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 95 - 193
Target Start/End: Original strand, 42512732 - 42512830
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaag 193  Q
    |||||||||||||||||||||||||| ||||  ||||||  |  |||  ||||||| ||||||||||||||||  |  ||| ||||||||| |||||||    
T  42512732 tttgatttgctaaaaaataaaggacaggacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 42512830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 95 - 197
Target Start/End: Original strand, 44738004 - 44738106
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||| ||||||||||||| || |||| ||||  |||||||||| |||  ||||||| ||||||||||||||||  |  |||||||||  || ||||||||    
T  44738004 tttgttttgctaaaaaatgaaagacaagacagaacaactctaattgtccagtgtttaatttgtaaaactgtttcaggtacatgacaacttggaggcaagg 44738103  T
Q  195 gac 197  Q
    |||    
T  44738104 gac 44738106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 95 - 193
Target Start/End: Complemental strand, 50304863 - 50304765
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaag 193  Q
    |||||||||||||||||| ||||||| ||||  ||||||| |  |||  ||||||| ||||||||||||||||  |  ||| ||||||||| |||||||    
T  50304863 tttgatttgctaaaaaatgaaggacaggacagaacaactccagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag 50304765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 217
Target Start/End: Complemental strand, 16704925 - 16704816
Alignment:
Q  108 aaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagggaccagataaaaa 207  Q
    ||||||||||||| ||||  ||||||  || |||  | ||||| ||||||||||||||||  |  ||||||||||||| |||||||||||  || |||||    
T  16704925 aaaataaaggacaggacagaacaacttcaattgtccaatgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaagggacacgacaaaaa 16704826  T
Q  208 cataaatttt 217  Q
    |||| |||||    
T  16704825 catatatttt 16704816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 246
Target Start/End: Original strand, 2761562 - 2761670
Alignment:
Q  139 tgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagggaccagataaaaacataaattt-tgtccatcactaaacgacaac 237  Q
    ||||| |||||| |||||||||| ||||| || ||||||| |||||  ||||||||||| | | ||||||| || ||| | ||| ||||||||| |||||    
T  2761562 tgtatggtgtttaatttgtaaaattgtttatgcgacatgataaactagaggcaagggacaaaacaaaaacaaaattttatatccctcactaaaccacaac 2761661  T
Q  238 acaactttt 246  Q
    |||| ||||    
T  2761662 acaattttt 2761670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 167
Target Start/End: Original strand, 11772594 - 11772666
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgttt 167  Q
    |||||||||||| ||||| ||||||| ||||| ||||||| |  |||  ||||||| ||||||||||||||||    
T  11772594 tttgatttgctagaaaatgaaggacaggacataacaactccagttgtccagtgtttgatttgtaaaactgttt 11772666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 246
Target Start/End: Complemental strand, 17291790 - 17291639
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||| |||||||||||  || |||||||| |||||||| |  ||||  || ||| ||||||||||||||||||  |||| || ||  ||||| ||||     
T  17291790 tttgatctgctaaaaaattgagaacatgacaggacaactccagttgtacggtatttgatttgtaaaactgtttttaggacaggataagttgaagtcaaga 17291691  T
Q  195 gaccagataaaaacataaa-ttttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||||||| ||||||||  |||||||| |||||| |||||||    
T  17291690 gacaggacaaaaacataaatttttgtcc-ccactaaaccacaacaaaactttt 17291639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 246
Target Start/End: Complemental strand, 31004344 - 31004192
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||| ||||  ||||||  |  |||  ||||||| ||||||||||||||||  |  ||| ||||||||| ||||| ||    
T  31004344 tttgatttgctaaaaaatgaaggacaggacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcacgg 31004245  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  |   |||||||| |||| |||| ||||||||||||||    
T  31004244 gacaggacaaaaactgatgtttttgtccctcaccaaaccacaacacaactttt 31004192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 167
Target Start/End: Complemental strand, 38663319 - 38663247
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgttt 167  Q
    |||||||||||||||||| ||||||| ||||  ||||||| |  |||  ||||||| ||||||||||||||||    
T  38663319 tttgatttgctaaaaaatgaaggacaagacagaacaactccagttgtccagtgtttgatttgtaaaactgttt 38663247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 197
Target Start/End: Original strand, 6143999 - 6144050
Alignment:
Q  146 tgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagggac 197  Q
    ||||| ||||||||||| ||||  |||||||||||||||| |||||||||||    
T  6143999 tgtttgatttgtaaaacagtttcagagacatgacaaactggaggcaagggac 6144050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 246
Target Start/End: Original strand, 13994086 - 13994189
Alignment:
Q  144 agtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagggaccagataaaaacataaatttt-gtccatcactaaacgacaacacaac 242  Q
    ||||||| ||||||||||||||||    ||||||||||| || |||||||| ||  || ||||||  ||||||| |||| |||| |||| ||||||||||    
T  13994086 agtgtttgatttgtaaaactgtttcatggacatgacaaattggaggcaaggaactggacaaaaactgaaatttttgtccctcaccaaaccacaacacaac 13994185  T
Q  243 tttt 246  Q
    ||||    
T  13994186 tttt 13994189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 246
Target Start/End: Complemental strand, 16437577 - 16437422
Alignment:
Q  92 gcatttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggca 191  Q
    ||||||||||||||||||||| |||||||  | |  |||||||||  |||  | ||||| ||||||||||||||||  |  ||| ||||||||  |||||    
T  16437577 gcatttgatttgctaaaaaatgaaggacagaatagaacaactctagttgtccaatgtttgatttgtaaaactgtttcagctacaggacaaactagaggca 16437478  T
Q  192 agggaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    | ||||  || ||||||  | | |||||||| |||| |||| ||||||||||||||    
T  16437477 aaggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttt 16437422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 194
Target Start/End: Complemental strand, 21071826 - 21071727
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||| ||| ||| ||||||||  ||||||  || |||  ||||||| |||||||||| |||||  |  ||||||||||||| ||||||||    
T  21071826 tttgatttgctaaagaatgaagtacatgacagaacaacttcaattgtccagtgtttgatttgtaaaattgtttcaggtacatgacaaactggaggcaagg 21071727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 246
Target Start/End: Original strand, 3560158 - 3560264
Alignment:
Q  141 tatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagggaccagataaaaacataaa-ttttgtccatcactaaacgacaacac 239  Q
    |||| ||||| ||||||||| |||| || |||| | ||||||||||| |||| |||| | | |||||  |||| |||||||| | ||||||| |||||||    
T  3560158 tataatgtttgatttgtaaatctgtcttagagataggacaaactgaaagcaatggacaaaacaaaaatttaaagttttgtcccttactaaaccacaacac 3560257  T
Q  240 aactttt 246  Q
    |||||||    
T  3560258 aactttt 3560264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 167
Target Start/End: Complemental strand, 40856342 - 40856280
Alignment:
Q  105 taaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgttt 167  Q
    |||||||| || ||||||||||| ||||||||| |||||| ||||| ||| ||| ||||||||    
T  40856342 taaaaaatgaatgacatgacatggcaactctaattgtataatgtttaattcgtacaactgttt 40856280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 246
Target Start/End: Original strand, 41967810 - 41967963
Alignment:
Q  95 tttgatttg-ctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaag 193  Q
    ||||||||| ||||||||| ||||||| ||||  |||||||||  |||  ||| ||| ||||||||||||||||  |  ||| ||||||||  |||||||    
T  41967810 tttgatttgactaaaaaatgaaggacaggacagaacaactctagttgtccagtatttgatttgtaaaactgtttcaggtacaggacaaactagaggcaag 41967909  T
Q  194 ggaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
     ||| ||| ||||||  | | |||||||| | || |||| ||||||||||||||    
T  41967910 agacaagacaaaaactcatatttttgtcccttaccaaaccacaacacaactttt 41967963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 175
Target Start/End: Complemental strand, 7146964 - 7146892
Alignment:
Q  103 gctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagaca 175  Q
    |||||||| ||||||| | ||||| ||||||  |  |||||||||||| |||||||||| |||||||| ||||    
T  7146964 gctaaaaattaaaggataagacataacaacttcagttgtatagtgtttgatttgtaaaattgtttttgggaca 7146892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 167
Target Start/End: Original strand, 15539852 - 15539924
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgttt 167  Q
    ||||||||| |||||||| ||||||| ||||  ||||||| |  |||  ||||||| ||||||||||||||||    
T  15539852 tttgatttgttaaaaaatgaaggacaggacagaacaactccagttgtccagtgtttgatttgtaaaactgttt 15539924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 246
Target Start/End: Complemental strand, 16387065 - 16386914
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||| ||||||||| ||||||||||||  |||  ||||  |||  ||||||| ||||||||||||||||  |  ||| ||||||||  ||||||||    
T  16387065 tttgattt-ctaaaaaatgaaggacatgacagaacagttctagttgttcagtgtttgatttgtaaaactgtttcaggtacaggacaaactagaggcaagg 16386967  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||||| |||| |||| ||| ||||||||||    
T  16386966 gacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttt 16386914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 167
Target Start/End: Complemental strand, 39282106 - 39282034
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgttt 167  Q
    ||||||||||||||| || |||||||||||| || ||||  |  |||  ||||||| ||||||||||||||||    
T  39282106 tttgatttgctaaaacatgaaggacatgacaagataacttcagttgttcagtgtttgatttgtaaaactgttt 39282034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 167
Target Start/End: Original strand, 40811333 - 40811405
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgttt 167  Q
    |||||||||||||||||| ||||||||||||  |||||| ||  |||  || |||| |||| |||||||||||    
T  40811333 tttgatttgctaaaaaatgaaggacatgacaaaacaactttagttgtccagcgtttgatttataaaactgttt 40811405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 167
Target Start/End: Complemental strand, 45659033 - 45658961
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgttt 167  Q
    |||||||||||| ||||| ||||||| ||||  ||||||| |  ||| |||||| | ||||||||||||||||    
T  45659033 tttgatttgctagaaaatgaaggacaggacaaaacaactccagttgtctagtgtctgatttgtaaaactgttt 45658961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0957 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 95 - 167
Target Start/End: Original strand, 2389 - 2461
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgttt 167  Q
    |||||||||||||||| | ||||||| ||||| |||||||||  |||  ||||||| ||||||||||||||||    
T  2389 tttgatttgctaaaaattgaaggacaagacataacaactctagttgttcagtgtttgatttgtaaaactgttt 2461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 95 - 246
Target Start/End: Complemental strand, 23778 - 23626
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| |||| || ||||  |||||||||  |||  ||||||| ||||||||||||||||  |  ||| ||||||||  ||||||||    
T  23778 tttgatttgctaaaaaatgaagggcaggacagaacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaacttgaggcaagg 23679  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||||| |||| |||| ||| ||||||||||    
T  23678 gacatgacaaaaactcatatttttgtccttcaccaaaccacagcacaactttt 23626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 95 - 167
Target Start/End: Complemental strand, 102152 - 102080
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgttt 167  Q
    |||||||||||||||||| ||||||||||||  |||||||||  | |  ||||||| ||||||||||||||||    
T  102152 tttgatttgctaaaaaatgaaggacatgacagaacaactctagttatccagtgtttgatttgtaaaactgttt 102080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 246
Target Start/End: Original strand, 1585 - 1688
Alignment:
Q  144 agtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagggaccagataaaaacataaa-ttttgtccatcactaaacgacaacacaac 242  Q
    ||||||| ||||||||||||||||    || | ||||||||| ||||||||||| ||| ||||||  ||| |||||||| |||| |||| ||||||||||    
T  1585 agtgtttgatttgtaaaactgtttcaaggataggacaaactggaggcaagggacaagacaaaaactgaaatttttgtccctcaccaaaccacaacacaac 1684  T
Q  243 tttt 246  Q
    ||||    
T  1685 tttt 1688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 202
Target Start/End: Original strand, 15266 - 15373
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||| |||||| |  |||||||||  |||  ||||||| ||||||||||||||||  |  ||| || |||||| ||||||||    
T  15266 tttgatttgctaaaaaatgaagaacatgatagaacaactctagttgttcagtgtttgatttgtaaaactgtttcaggtacaggataaactggaggcaagg 15365  T
Q  195 gaccagat 202  Q
    ||| ||||    
T  15366 gacaagat 15373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0729 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0729
Description:

Target: scaffold0729; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 246
Target Start/End: Original strand, 4472 - 4624
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagg 194  Q
    |||||||||||||||||| ||||||| ||||  |||||||||  |||  ||||||| |||||||||| || ||| |  | |  ||||| || ||||||||    
T  4472 tttgatttgctaaaaaatgaaggacaggacagaacaactctagttgtccagtgtttgatttgtaaaattgatttaggtatagcacaaattggaggcaagg 4571  T
Q  195 gaccagataaaaacata-aattttgtccatcactaaacgacaacacaactttt 246  Q
    |||  || ||||||  | | |||||||| |||| |||| ||||||||||||||    
T  4572 gacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttt 4624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 246
Target Start/End: Original strand, 17996 - 18099
Alignment:
Q  144 agtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagggaccagataaaaacata-aattttgtccatcactaaacgacaacacaac 242  Q
    ||||||| ||||||||||||||||  |  |||||||||| || |||||||||||  || ||||||  | | |||||||| |||| |||| ||||||||||    
T  17996 agtgtttgatttgtaaaactgtttcaggtacatgacaaattggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaac 18095  T
Q  243 tttt 246  Q
    ||||    
T  18096 tttt 18099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 246
Target Start/End: Original strand, 42892 - 42995
Alignment:
Q  144 agtgttttatttgtaaaactgtttttgagacatgacaaactgaaggcaagggaccagataaaaacataaattt-tgtccatcactaaacgacaacacaac 242  Q
    ||||||| ||||||||||||||||  | ||||  |||||||| |||||||||||   | ||||||  |||||| ||||| |||| |||| ||||||||||    
T  42892 agtgtttgatttgtaaaactgtttcagggacagaacaaactggaggcaagggacagaacaaaaactgaaatttgtgtccctcaccaaaccacaacacaac 42991  T
Q  243 tttt 246  Q
    ||||    
T  42992 tttt 42995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 246
Target Start/End: Original strand, 3565 - 3669
Alignment:
Q  145 gtgttttatttgtaaaactgtttttgagacatgacaaac---tgaaggcaagggaccagataaaaacataaattttgtccatcactaaacgacaacacaa 241  Q
    |||||| |||||||||| |||||||   |||||||||||   |  | ||||||||| | | ||||||||||||||||||| | ||||||| |||||| ||    
T  3565 gtgtttgatttgtaaaattgtttttagaacatgacaaacaacttgatgcaagggacaaaacaaaaacataaattttgtcccttactaaaccacaacataa 3664  T
Q  242 ctttt 246  Q
    |||||    
T  3665 ctttt 3669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 167
Target Start/End: Complemental strand, 51641 - 51569
Alignment:
Q  95 tttgatttgctaaaaaataaaggacatgacatgacaactctaactgtatagtgttttatttgtaaaactgttt 167  Q
    ||||||||| |||||||| |||||||  |||  |||||| ||| |||  ||||||| ||||||||||||||||    
T  51641 tttgatttgataaaaaatgaaggacaaaacagaacaactttaattgtccagtgtttgatttgtaaaactgttt 51569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University