View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19122_high_31 (Length: 258)
Name: NF19122_high_31
Description: NF19122
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19122_high_31 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 249; Significance: 1e-138; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 10 - 258
Target Start/End: Complemental strand, 1594875 - 1594627
Alignment:
| Q |
10 |
agcaaaggcaataaattagggtgtctaagatcagcaatcattttcactatctttgcaaattcctccttagtgaatggtttcaagtcccttaacctcttta |
109 |
Q |
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| T |
1594875 |
agcaaaggcaataaattagggtgtctaagatcagcaatcattttcactatctttgcaaattcctccttagtgaatggtttcaagtcccttaacctcttta |
1594776 |
T |
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| Q |
110 |
caacaatggtaggtccattattcaacattgccttataactatttcccataattccatgacctaatgcctcagcagaagctctaagaagttctcccatttg |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1594775 |
caacaatggtaggtccattattcaacattgccttataactatttcccataattccatgacctaatgcctcagcagaagctctaagaagttctcccatttg |
1594676 |
T |
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| Q |
210 |
aaattttgtctcatctttaaagaacattaactcctttctctcttctact |
258 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1594675 |
aaattttgtctcatctttaaagaacattaactcctttctctcttctact |
1594627 |
T |
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