View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19122_high_36 (Length: 238)
Name: NF19122_high_36
Description: NF19122
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19122_high_36 |
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Alignment Details
Target: chr4 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 1416209 - 1416433
Alignment:
| Q |
1 |
agccttaaacgtagggagttgctcataaacaatgaatttgccacaaacataacccattctaccattagagagagaaagaaata--aagaggataaatgaa |
98 |
Q |
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| T |
1416209 |
agccttaaacgtagggagttgctcataaacaatgaatttgccacaaacataacccattctaccattagagagagaaagaaatataaagagaataaatgaa |
1416308 |
T |
|
| Q |
99 |
agaagtgataggttgatgatatgagtgtgtaaaaagcaagggtgtacaaatataattgtttcaaattataacggtaagagtggtttattactattttgtt |
198 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| |
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| T |
1416309 |
agaagtgataggttgatgatatgagtgtgtaaaaagcaagggtgtacaaatataattgtttccaattataacggtaagagtagtttattactattttgtt |
1416408 |
T |
|
| Q |
199 |
agtagaaaaatgatttatgatattt |
223 |
Q |
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||||||||||||||||||||||||| |
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| T |
1416409 |
agtagaaaaatgatttatgatattt |
1416433 |
T |
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