View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19122_low_21 (Length: 354)
Name: NF19122_low_21
Description: NF19122
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19122_low_21 |
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Alignment Details
Target: chr3 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 12 - 338
Target Start/End: Original strand, 26102673 - 26102978
Alignment:
| Q |
12 |
ataggacgttaattttgatagaactcgttggcatataaaataatatctgattatcgtcaaaatttgtagacataattcaaattcacattggccacaaact |
111 |
Q |
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| T |
26102673 |
ataggatgttaattttgatagaactcgttggcatataaaataatatatgattatcgtcaaaatttgtagacataattcaaattgacattggccacaaact |
26102772 |
T |
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| Q |
112 |
ctgtatatagggtatggttcccaatatacagaacaaaccgcatgcatgatgccttttctctcattctgaagagtagtgtataagacttttgaatttagat |
211 |
Q |
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| T |
26102773 |
ctgtatataggttatggtctgcaatatacagaacaaaccgcatgcatgttgccttttctctcattctgaagagtagtgtataggacttttgaatttagat |
26102872 |
T |
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| Q |
212 |
taagaaaaccacaggctaatggttgttcatcatccgcctcccactctctctcccaccgtccatccctttagatatgatgatgtcaataggctaccattaa |
311 |
Q |
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| T |
26102873 |
taagaaaaccacaggctaatggttgttca---------------------tcccaccgtccatccctttagatatgatgatgtcaataggctacgattaa |
26102951 |
T |
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| Q |
312 |
agtttatccaaacgtccaagtatttct |
338 |
Q |
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||||||||||||||||||||||||||| |
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| T |
26102952 |
agtttatccaaacgtccaagtatttct |
26102978 |
T |
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