View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19122_low_26 (Length: 312)
Name: NF19122_low_26
Description: NF19122
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19122_low_26 |
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Alignment Details
Target: chr2 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 271
Target Start/End: Original strand, 4760248 - 4760518
Alignment:
| Q |
1 |
tgagagaaaatgaatcgatgaaactatttgaagggttatgtgaagtttaaatacaggggaaatacagagcacaataagcacatgcaaagaacagtgatgt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4760248 |
tgagagaaaatgaatcgatgaaactatttgaagggttatgtgaagtttaaatacaggggaaatacagagcacaataagcacatgcaaagaacagtgatgt |
4760347 |
T |
|
| Q |
101 |
cccttttataaagttaattgtggatattatgacacaagatctcaaattattcannnnnnnnnggttaagcaaattattcatttattagtagggttttatg |
200 |
Q |
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|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
4760348 |
cccttttataaagttaattgtggatattatgacacaagatctcaaattattcatttttttttggttaagcaaattattcatttattagtagggttttatg |
4760447 |
T |
|
| Q |
201 |
catcatttgttgcaagtaaaaatacttacgtatcttgtacccnnnnnnnntaatacttatgtatcttgtac |
271 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
4760448 |
catcatttgttgcaagtaaaaatacttacgtatcttgtacccaaaaaaaataatacttatgtatcttgtac |
4760518 |
T |
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