View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19122_low_28 (Length: 285)
Name: NF19122_low_28
Description: NF19122
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19122_low_28 |
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Alignment Details
Target: chr3 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 18 - 270
Target Start/End: Complemental strand, 53096054 - 53095802
Alignment:
| Q |
18 |
gattatatttcatattctgtagaatttcaacttcttgtccttgtccttgtcggctggaggtaacgggttaaaggttgaagactgttttaccaaaggtgga |
117 |
Q |
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| T |
53096054 |
gattatatttcatattctgtagaatttcaacttcttgtccttgtccttgtcggctggaggtaacgggttaaaggttgaagactgttttaccaaaggtgga |
53095955 |
T |
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| Q |
118 |
agtaggaggttagaacagttctcaaaatgtcaagtgccttattttcggtctatacagcagcagcatgggctcatgccaataccaacaactccaccaaatc |
217 |
Q |
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| T |
53095954 |
attaggaggttagaacagttctcaaaatctcaagtgccttattttcggtctatacaacagcagcatgggctcatgccaataccaacaactccaccaaatc |
53095855 |
T |
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| Q |
218 |
agtatacctcaacttcttacattgatcagcttcctgctgcaggaccacaggtt |
270 |
Q |
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| T |
53095854 |
agtatacctcaacttcttacattgatcagcttcctgctgcaggaccacaggtt |
53095802 |
T |
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