View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19123_high_22 (Length: 249)
Name: NF19123_high_22
Description: NF19123
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19123_high_22 |
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Alignment Details
Target: chr5 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 74 - 239
Target Start/End: Complemental strand, 40562735 - 40562573
Alignment:
| Q |
74 |
atagatataataataatcaaggatcccatcaatatcaaaataactcaacttgagacttatttcattcttctccctcctttctcttcttcaaacaccttca |
173 |
Q |
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| T |
40562735 |
atagatataataataatcaaggatcccatcaatatcaaaataactcaacttgagacttatttcattcttctccctcctttctcttcttca---accttca |
40562639 |
T |
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| Q |
174 |
cctcannnnnnnnccaatatggttactacaacttcatacgtcacaaatgttaaatccaccgttcat |
239 |
Q |
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||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40562638 |
cctcattttttttccaatatggttactacaacttcatacgtcacaaatgttaaatccaccgttcat |
40562573 |
T |
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