View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19123_low_17 (Length: 302)
Name: NF19123_low_17
Description: NF19123
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19123_low_17 |
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Alignment Details
Target: chr5 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 1 - 269
Target Start/End: Original strand, 26511543 - 26511811
Alignment:
| Q |
1 |
aagataatagaaatattgaaaaagctacatagcataaaaaagttgtggctgcaaattctctacaaattttcatgtatcccccactcaaccaatcctcgtc |
100 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26511543 |
aagataatagaaatattgaaaaatctacatagcataaaaaagttgtggctgcaaattctctacaaattttcatgtatcccccactcaaccaatcctcgtc |
26511642 |
T |
|
| Q |
101 |
atttgttctaatctctctctccttggacctttgtctcagtgtcactattttctcattgcaacttgagtgnnnnnnnnnnnnncaaccaaatttagaattt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
26511643 |
atttgttctaatctctctctccttggacctttgtctcagtgtcactattttctcattgcaacttgagtgaaaaatcaaaaaacaaccaaatttagaattt |
26511742 |
T |
|
| Q |
201 |
cttggaaaacaaaactactcttaaagttatgctatatttttggaaaaggataatttattaaactctgca |
269 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26511743 |
cttggaaaacaaaactactcttaaagttatgctatatttttggaaaaggataatttattaaactctgca |
26511811 |
T |
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