View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19127_high_20 (Length: 334)
Name: NF19127_high_20
Description: NF19127
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19127_high_20 |
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Alignment Details
Target: chr4 (Bit Score: 270; Significance: 1e-151; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 18 - 321
Target Start/End: Original strand, 45280892 - 45281188
Alignment:
| Q |
18 |
aaaaactattgaaaaaatggtgatgtttcaaattcaatcactacgtaatgcgagatctgatctgtggttcactatgttatgacgcatgacactcaaacaa |
117 |
Q |
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| T |
45280892 |
aaaaactattgaaaaaatggtgatgtttcaaattcaatcactacgtaatgcgagatctgatctgtgattcactatgttatgacacatgacactcaaacaa |
45280991 |
T |
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| Q |
118 |
caagaccacactagctatagctagctagctttgtgttgtaaattaaattaaatcgaactaactatggccaaccaataaaatcaaatttataaaatttata |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
45280992 |
caagaccacactagctatagctagctagctttgtgttgtaaattaaattaaatcgaactaactatggccaaccaataaaatcaaattta-------tata |
45281084 |
T |
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| Q |
218 |
ccggcccaacacatgttaatacgacctaatatccctggcctgagtggttgttatgggatgaaggtggtgagcgttgaacaactcctctgattacatgatg |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45281085 |
ccggcccaacacatgttaatacgacctaatatccctggcctgagtggttgttatgggatgaaggtggtgagcgttgaacaactcctctgattacatgatg |
45281184 |
T |
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