View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19127_high_26 (Length: 294)
Name: NF19127_high_26
Description: NF19127
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19127_high_26 |
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Alignment Details
Target: chr4 (Bit Score: 275; Significance: 1e-154; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 51755948 - 51755662
Alignment:
| Q |
1 |
aggtaaacttcatctttccctttgtaactccgtcatcgtcttcaacaacgctgttactaggaacacgcgctggacaagcatcatcatgacgaggttccaa |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
51755948 |
aggtaaacttcatctttccctttgtaactccgtcatcgtcttcaacaacgctgttactaggaacacgcgctggacaagcataatcatgacgaggttccaa |
51755849 |
T |
|
| Q |
101 |
cacttccagacctaggtgaggtttatcggaggaagtgtcgtgggaaggaggtaacaattcaggtttaggggttgggatcctccagaagattacggcgagc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
51755848 |
cacttccagacctaggtgaggtttatcggaggaagtgtcgtgggaaggaggtaacaattcaggtttaggggttgggatcctccagaagatgacggcgagc |
51755749 |
T |
|
| Q |
201 |
catgtccataaatggttgaagaaatcgaagctcaagtagttgaaagctagagtgtcaagtggagaattttctgacatgttcatctct |
287 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
51755748 |
catgtccataaatggttgaagaaatcgaagctcaagtagttgaaagctagagtgtcaagtggagaattttctaacatgttcatctct |
51755662 |
T |
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