View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19127_high_29 (Length: 276)
Name: NF19127_high_29
Description: NF19127
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19127_high_29 |
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Alignment Details
Target: chr4 (Bit Score: 243; Significance: 1e-135; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 18 - 260
Target Start/End: Original strand, 34966363 - 34966605
Alignment:
| Q |
18 |
aaatagctcttaaaactattatcaaagctgtattcataatcttaatgcacacaacaacacacatgaatgtagtctctggctttcaaaacatggttattcc |
117 |
Q |
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| T |
34966363 |
aaatagctcttaaaactattatcaaagctgtattcataatcttaatgcacacaacaacacacatgaatgtagtctctggctttcaaaacatggttattcc |
34966462 |
T |
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| Q |
118 |
aagacatataaacctcttagttggttgttgagtctcaacaccatctcatgaactaagcacattaggaatttaaaatctttggtaactttccaagttattt |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34966463 |
aagacatataaacctcttagttggttgttgagtctcaacaccatctcatgaactaagcacattaggaatttaaaatctttggtaactttccaagttattt |
34966562 |
T |
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| Q |
218 |
ttgggacttgagacataatttccccaagttttttgctcttcat |
260 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34966563 |
ttgggacttgagacataatttccccaagttttttgctcttcat |
34966605 |
T |
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