View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19127_high_40 (Length: 232)
Name: NF19127_high_40
Description: NF19127
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19127_high_40 |
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Alignment Details
Target: chr7 (Bit Score: 129; Significance: 7e-67; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 46410429 - 46410197
Alignment:
| Q |
1 |
aatgagattaaatgaaaggataacaaaatatttcgaatagaaaaaattgataagcaatatctaatgaaaaaacttgttttgagagggnnnnnnnnctaaa |
100 |
Q |
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| T |
46410429 |
aatgagattaaatgaaaggataacaaaatatttcgaatagaaaaaatggataagcaatatctaatgaaaaaacttgttttgagaggg-tttttttctaaa |
46410331 |
T |
|
| Q |
101 |
ccatcatgttaaatgaatgtatgaga-----------------acctccagatgctgacatgcacatcgtaatgacgaacctccatcacaccactattgt |
183 |
Q |
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|||||||||||||||||||||||||| || |||||||||||||||||||||||| | |||||||||||||||||||||||||| |
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| T |
46410330 |
ccatcatgttaaatgaatgtatgagattcttcctcgtcttctcgccaccagatgctgacatgcacatcgtattaacgaacctccatcacaccactattgt |
46410231 |
T |
|
| Q |
184 |
gtccctctcttttgcttttgctgggcatttatgt |
217 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
46410230 |
gtccctctcttttgcttttgctgggcatttatgt |
46410197 |
T |
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