View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19127_high_8 (Length: 456)
Name: NF19127_high_8
Description: NF19127
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19127_high_8 |
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Alignment Details
Target: chr8 (Bit Score: 405; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 405; E-Value: 0
Query Start/End: Original strand, 1 - 447
Target Start/End: Complemental strand, 4571339 - 4570889
Alignment:
| Q |
1 |
atggatggagttcctattgggagaaaaatagacatcgatgcttatgatagctatgaaaaactttcatctgctgttgatgacctatttagaggtctccttg |
100 |
Q |
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| T |
4571339 |
atggatggagttcctattgggagaaaaatagacatcaatgcttatgatagctatgaaaaactttcatctgctgttgatgacctatttagaggtctccttg |
4571240 |
T |
|
| Q |
101 |
aaggtaatatactaatattcggatcctgattgactgcagtc--actatagttggtaaacattgatcgatagatagagattagaatgtttgtgttttaact |
198 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| |
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| T |
4571239 |
aaggtaatatactaatattcggatcctgattgactgcagtctcactatagttggtaaacgttgatcgatagatagagatcagaatgtttgtgttttaact |
4571140 |
T |
|
| Q |
199 |
tcaacaatttgattgacaatacaacttgaattcacaatcatctccggtcttaaacatacgactaagattacaactgcaagaactattgactgcatgcggt |
298 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4571139 |
tcaacaatttgattgacaatacaacttgaattcacaatcatctccggtcttaaacatacgactaagattacaactgcaagaactattgactgcatgcggt |
4571040 |
T |
|
| Q |
299 |
ccatttctgtaatattcatgaaccttgcatagtctatttaatttcaattgtttatttatttgctcttgacataaacttttgttgtgtggaaatgtttttc |
398 |
Q |
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|||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4571039 |
ccatttctgtaatattcatggaccttgcgtagtctatttaatttcaattgtttatttatttgctcttgacataaacttttgttgtgtggaaatgtttttc |
4570940 |
T |
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| Q |
399 |
tttgttgggaaat--aaaagcttgtatagttagacatgttttctccctttg |
447 |
Q |
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||||||||||||| ||||||||||||||||||||||||||||||| |||| |
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| T |
4570939 |
tttgttgggaaataaaaaagcttgtatagttagacatgttttctccttttg |
4570889 |
T |
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