View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19127_low_27 (Length: 299)

Name: NF19127_low_27
Description: NF19127
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19127_low_27
NF19127_low_27
[»] chr3 (20 HSPs)
chr3 (1-113)||(19830390-19830502)
chr3 (1-113)||(27033655-27033767)
chr3 (1-113)||(34373835-34373947)
chr3 (1-113)||(2229987-2230099)
chr3 (1-113)||(43719906-43720018)
chr3 (1-114)||(46167397-46167510)
chr3 (13-113)||(24754673-24754773)
chr3 (13-113)||(24763670-24763770)
chr3 (8-113)||(40851785-40851890)
chr3 (1-98)||(34373559-34373656)
chr3 (1-111)||(48084823-48084934)
chr3 (10-99)||(550790-550878)
chr3 (64-113)||(24647905-24647954)
chr3 (1-77)||(31523663-31523739)
chr3 (12-100)||(566746-566834)
chr3 (1-77)||(42613084-42613160)
chr3 (1-77)||(49679265-49679341)
chr3 (1-92)||(12402970-12403061)
chr3 (24-111)||(33632849-33632935)
chr3 (24-110)||(28229365-28229450)
[»] chr2 (23 HSPs)
chr2 (1-116)||(13238685-13238800)
chr2 (1-113)||(35316829-35316941)
chr2 (1-118)||(23259441-23259558)
chr2 (1-113)||(28564896-28565008)
chr2 (27-113)||(45625038-45625124)
chr2 (41-113)||(11864913-11864985)
chr2 (3-111)||(2063359-2063467)
chr2 (2-70)||(30709115-30709183)
chr2 (1-105)||(36929720-36929823)
chr2 (34-110)||(40640706-40640783)
chr2 (1-77)||(374997-375073)
chr2 (8-77)||(13780509-13780579)
chr2 (22-111)||(35315527-35315615)
chr2 (1-77)||(8988859-8988935)
chr2 (1-77)||(23459841-23459917)
chr2 (1-109)||(30857642-30857749)
chr2 (1-104)||(15709772-15709874)
chr2 (1-92)||(21454476-21454565)
chr2 (1-111)||(19908784-19908892)
chr2 (1-111)||(38397085-38397194)
chr2 (8-77)||(40254144-40254214)
chr2 (28-108)||(4446860-4446940)
chr2 (31-111)||(36758823-36758902)
[»] chr1 (25 HSPs)
chr1 (1-119)||(50294016-50294134)
chr1 (1-113)||(50484390-50484502)
chr1 (1-118)||(48327108-48327224)
chr1 (1-113)||(12151771-12151883)
chr1 (42-113)||(12380836-12380907)
chr1 (42-113)||(12384903-12384974)
chr1 (1-113)||(23861911-23862026)
chr1 (1-111)||(18976265-18976376)
chr1 (23-113)||(7840638-7840728)
chr1 (8-112)||(40328289-40328390)
chr1 (33-113)||(45978041-45978121)
chr1 (2-113)||(32361266-32361377)
chr1 (1-77)||(52280034-52280110)
chr1 (161-256)||(52724266-52724361)
chr1 (1-60)||(24413294-24413353)
chr1 (1-111)||(32618805-32618913)
chr1 (1-58)||(12380924-12380981)
chr1 (1-58)||(12384991-12385048)
chr1 (22-67)||(24977265-24977310)
chr1 (1-70)||(39426214-39426283)
chr1 (8-77)||(6948825-6948896)
chr1 (8-77)||(18107316-18107386)
chr1 (47-113)||(30860728-30860794)
chr1 (24-120)||(27982079-27982174)
chr1 (1-77)||(30077639-30077715)
[»] chr8 (22 HSPs)
chr8 (1-118)||(28069723-28069840)
chr8 (1-113)||(30426628-30426740)
chr8 (1-113)||(36991360-36991472)
chr8 (1-113)||(10672473-10672583)
chr8 (1-113)||(10652576-10652688)
chr8 (22-113)||(40695207-40695297)
chr8 (1-115)||(44859126-44859238)
chr8 (28-111)||(37966405-37966487)
chr8 (16-116)||(6014213-6014314)
chr8 (1-108)||(41511266-41511373)
chr8 (1-111)||(45113274-45113385)
chr8 (55-113)||(5033310-5033368)
chr8 (1-77)||(26749543-26749619)
chr8 (27-78)||(12177575-12177626)
chr8 (27-78)||(12422003-12422054)
chr8 (22-60)||(5033109-5033147)
chr8 (8-77)||(17867654-17867724)
chr8 (1-78)||(24102020-24102097)
chr8 (1-70)||(36748494-36748562)
chr8 (1-104)||(18689495-18689597)
chr8 (1-67)||(34612568-34612634)
chr8 (8-52)||(11090512-11090556)
[»] chr7 (27 HSPs)
chr7 (1-118)||(4888471-4888588)
chr7 (1-113)||(9559013-9559125)
chr7 (1-113)||(21151156-21151268)
chr7 (1-113)||(45260386-45260498)
chr7 (1-113)||(12139330-12139443)
chr7 (1-113)||(18198260-18198372)
chr7 (1-113)||(16366522-16366634)
chr7 (22-118)||(44647989-44648085)
chr7 (1-113)||(47226035-47226145)
chr7 (1-105)||(7362572-7362676)
chr7 (1-108)||(25084690-25084799)
chr7 (1-108)||(989133-989239)
chr7 (1-111)||(33450510-33450621)
chr7 (39-115)||(47271105-47271180)
chr7 (1-111)||(47500243-47500354)
chr7 (1-108)||(29631052-29631156)
chr7 (8-76)||(32915967-32916035)
chr7 (1-77)||(47799895-47799971)
chr7 (8-70)||(19027685-19027748)
chr7 (8-70)||(20726888-20726951)
chr7 (34-108)||(34985909-34985984)
chr7 (2-76)||(7373872-7373946)
chr7 (8-77)||(14696752-14696822)
chr7 (11-67)||(46802336-46802392)
chr7 (8-77)||(30102504-30102574)
chr7 (47-104)||(33608845-33608901)
chr7 (33-77)||(35737149-35737193)
[»] chr5 (24 HSPs)
chr5 (1-113)||(18625380-18625492)
chr5 (1-113)||(35660568-35660680)
chr5 (1-118)||(37266735-37266852)
chr5 (1-116)||(11775797-11775912)
chr5 (1-113)||(13032122-13032234)
chr5 (1-113)||(32129576-32129688)
chr5 (1-108)||(4895699-4895806)
chr5 (1-118)||(14349807-14349924)
chr5 (1-118)||(40753116-40753233)
chr5 (9-113)||(34827204-34827308)
chr5 (1-113)||(39902419-39902531)
chr5 (1-111)||(29340999-29341108)
chr5 (2-113)||(43309113-43309224)
chr5 (1-77)||(36290606-36290682)
chr5 (1-100)||(8440943-8441042)
chr5 (22-109)||(18653386-18653472)
chr5 (1-60)||(43222130-43222189)
chr5 (22-92)||(3057135-3057204)
chr5 (1-55)||(4592804-4592858)
chr5 (22-76)||(27428877-27428931)
chr5 (1-111)||(31546490-31546599)
chr5 (27-87)||(1475640-1475700)
chr5 (34-111)||(10242889-10242965)
chr5 (1-77)||(41660110-41660186)
[»] chr6 (25 HSPs)
chr6 (1-113)||(4804452-4804564)
chr6 (1-118)||(21159323-21159440)
chr6 (1-113)||(13089708-13089820)
chr6 (1-116)||(27826542-27826657)
chr6 (1-111)||(12412641-12412751)
chr6 (1-113)||(17944166-17944278)
chr6 (1-113)||(1249107-1249217)
chr6 (1-113)||(7162088-7162200)
chr6 (8-114)||(227521-227628)
chr6 (35-113)||(32737895-32737973)
chr6 (27-111)||(1516168-1516251)
chr6 (27-111)||(1518257-1518340)
chr6 (1-77)||(24484883-24484959)
chr6 (1-111)||(13888483-13888594)
chr6 (8-109)||(2800574-2800675)
chr6 (1-54)||(29698167-29698220)
chr6 (1-108)||(7215816-7215923)
chr6 (37-111)||(1515503-1515576)
chr6 (1-77)||(2142288-2142364)
chr6 (8-77)||(7098190-7098260)
chr6 (8-77)||(7545648-7545718)
chr6 (47-104)||(28696624-28696680)
chr6 (24-60)||(20228516-20228552)
chr6 (24-60)||(22122500-22122536)
chr6 (48-104)||(30460875-30460930)
[»] chr4 (37 HSPs)
chr4 (1-113)||(19901877-19901989)
chr4 (1-113)||(56558283-56558395)
chr4 (1-113)||(34778425-34778537)
chr4 (1-113)||(3952129-3952241)
chr4 (1-113)||(24073620-24073732)
chr4 (8-113)||(23610653-23610758)
chr4 (1-113)||(5416425-5416536)
chr4 (1-113)||(5763121-5763233)
chr4 (1-113)||(33247089-33247201)
chr4 (27-113)||(12153184-12153270)
chr4 (1-113)||(12312434-12312547)
chr4 (1-113)||(18206999-18207111)
chr4 (1-113)||(33262511-33262623)
chr4 (1-104)||(30567905-30568008)
chr4 (1-113)||(38079679-38079791)
chr4 (24-113)||(52018790-52018879)
chr4 (9-111)||(47922327-47922430)
chr4 (1-111)||(23474115-23474224)
chr4 (48-113)||(33524313-33524378)
chr4 (31-113)||(39862551-39862633)
chr4 (1-77)||(56269071-56269147)
chr4 (8-76)||(56453816-56453884)
chr4 (21-107)||(34927509-34927596)
chr4 (1-77)||(5524451-5524527)
chr4 (1-77)||(1015849-1015925)
chr4 (1-77)||(36688183-36688259)
chr4 (27-77)||(5361456-5361506)
chr4 (8-77)||(17493013-17493083)
chr4 (8-77)||(32146513-32146583)
chr4 (8-77)||(46238977-46239047)
chr4 (8-77)||(53526099-53526169)
chr4 (8-77)||(55160365-55160435)
chr4 (8-70)||(25219006-25219070)
chr4 (12-56)||(25442190-25442234)
chr4 (28-87)||(26428999-26429059)
chr4 (1-77)||(37002246-37002322)
chr4 (1-77)||(42010121-42010197)
[»] scaffold0012 (1 HSPs)
scaffold0012 (1-113)||(208067-208179)
[»] scaffold0008 (1 HSPs)
scaffold0008 (1-113)||(9160-9272)
[»] scaffold0035 (1 HSPs)
scaffold0035 (1-118)||(16351-16468)
[»] scaffold0250 (1 HSPs)
scaffold0250 (1-113)||(7151-7267)
[»] scaffold0006 (1 HSPs)
scaffold0006 (33-112)||(73817-73896)
[»] scaffold0456 (1 HSPs)
scaffold0456 (27-113)||(13709-13796)
[»] scaffold0009 (1 HSPs)
scaffold0009 (30-111)||(6396-6477)
[»] scaffold0126 (1 HSPs)
scaffold0126 (22-111)||(22404-22492)
[»] scaffold0664 (1 HSPs)
scaffold0664 (8-77)||(4695-4765)
[»] scaffold0062 (1 HSPs)
scaffold0062 (1-104)||(58684-58786)
[»] scaffold0171 (1 HSPs)
scaffold0171 (1-67)||(17311-17377)


Alignment Details
Target: chr3 (Bit Score: 89; Significance: 6e-43; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 19830502 - 19830390
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||    
T  19830502 taattaatgatggtgggacccacttaatggtaggacccaccatctattttttgtgtctatttctccccaacttgcaaaactccatttattttgccaaatg 19830403  T
Q  101 gagaggatcttca 113  Q
    |||||||||||||    
T  19830402 gagaggatcttca 19830390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 27033655 - 27033767
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| ||||||||||||| ||||| |||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||| ||||  ||||||    
T  27033655 taattaatgatggtgggatccacttagtggtaggacccaccatctatttcttgtgtctatctctctccaacttgcaaaactccatttattttatcaaatg 27033754  T
Q  101 gagaggatcttca 113  Q
    |||| ||||||||    
T  27033755 gagatgatcttca 27033767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 34373835 - 34373947
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| ||||||||||| ||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| | | |||| ||||||||||||    
T  34373835 taattaatgatggtgggacctaattagtggtaggacccaccatctattttttgtgtctatctctctccaacttgcaaaacacaatttattttgccaaatg 34373934  T
Q  101 gagaggatcttca 113  Q
    ||||| |||||||    
T  34373935 gagagaatcttca 34373947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 2229987 - 2230099
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| ||||||||| | | ||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||| || ||||||||||||    
T  2229987 taattaatgatggtggaaaccacttagtggtaggacccatcatctattttttgtgtctatctctctccaacttgcaaaactccaattattttgccaaatg 2230086  T
Q  101 gagaggatcttca 113  Q
    |||||||| ||||    
T  2230087 gagaggatgttca 2230099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 43720018 - 43719906
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| ||||||||||| | ||||| ||||||||||||| || |||||||||||||||| ||||||||||||||||| |||||||| |||||  |||||    
T  43720018 taattaatgatggtgggacccacttagtggtaggacccacaatttattttttgtgtctatctctctccaacttgcaaaactccatttattttgttaaatg 43719919  T
Q  101 gagaggatcttca 113  Q
    |||||||||||||    
T  43719918 gagaggatcttca 43719906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 46167397 - 46167510
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| | ||||| ||||| ||||| |||||||||||||||| |||||||||||||||| |||||||||||| |||| |||||||| |||||| |||||    
T  46167397 taattaataatggtaggatccacttagtggtaggacccaccatatattttttgtgtctatctctctccaacttacaaaactccatttattttgctaaatg 46167496  T
Q  101 gagaggatcttcat 114  Q
    |||||||| |||||    
T  46167497 gagaggatgttcat 46167510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 13 - 113
Target Start/End: Original strand, 24754673 - 24754773
Alignment:
Q  13 gtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatggagaggatcttc 112  Q
    |||||| | ||||| |||||||||  |||||||||||| ||||||||| ||||||||||||| ||| |||||||| ||||||||||||||||||||||||    
T  24754673 gtgggacccacttagtggtaggacataccatctattttgtgtgtctatctctctccaacttgtaaaactccatttattttgccaaatggagaggatcttc 24754772  T
Q  113 a 113  Q
    |    
T  24754773 a 24754773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 13 - 113
Target Start/End: Original strand, 24763670 - 24763770
Alignment:
Q  13 gtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatggagaggatcttc 112  Q
    |||||| | ||||| |||||||||  |||||||||||| ||||||||| ||||||||||||| ||| |||||||| ||||||||||||||||||||||||    
T  24763670 gtgggacccacttagtggtaggacataccatctattttgtgtgtctatctctctccaacttgtaaaactccatttattttgccaaatggagaggatcttc 24763769  T
Q  113 a 113  Q
    |    
T  24763770 a 24763770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 113
Target Start/End: Original strand, 40851785 - 40851890
Alignment:
Q  8 tgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatggagagga 107  Q
    ||||||| ||| | ||||| |||| | |||||||||||||||||||||||||| | ||||||||||||||| |||||||| ||||| ||||| |||||||    
T  40851785 tgatggtaggacccacttagtggttgaacccaccatctattttttgtgtctatctttctccaacttgcaaaactccatttattttgtcaaattgagagga 40851884  T
Q  108 tcttca 113  Q
    ||||||    
T  40851885 tcttca 40851890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 34373656 - 34373559
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaa 98  Q
    |||||| ||||||||||| | ||||| |||||||||||||||||||||||| |||||||| ||| |  |||||||||| ||| |||| ||||||||||    
T  34373656 taattaatgatggtgggacccacttagtggtaggacccaccatctatttttagtgtctatctctatggaacttgcaaaactctatttattttgccaaa 34373559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 48084823 - 48084934
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctatt-ttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaat 99  Q
    |||||| ||||| ||||| | ||||| |||| |||||||||||||||| |||||||||||| |||| |||| ||||||| ||| |||| ||||  |||||    
T  48084823 taattaatgatgatgggacccacttagtggttggacccaccatctattcttttgtgtctatctctccccaaattgcaaaactcaatttattttagcaaat 48084922  T
Q  100 ggagaggatctt 111  Q
    ||||||||||||    
T  48084923 ggagaggatctt 48084934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 10 - 99
Target Start/End: Complemental strand, 550878 - 550790
Alignment:
Q  10 atggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaat 99  Q
    ||||||||| | |||||||| ||||| |||||||||||||||||| | ||| | ||||||| ||||||| |||||||| |||||||||||    
T  550878 atggtgggacccacttaatgataggatccaccatctattttttgtatatatctttctccaaattgcaaa-ctccatttattttgccaaat 550790  T

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Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 113
Target Start/End: Original strand, 24647905 - 24647954
Alignment:
Q  64 tctccaacttgcaaatctccatttcttttgccaaatggagaggatcttca 113  Q
    ||||||||||||||| |||||||| ||||| |||||||||||||||||||    
T  24647905 tctccaacttgcaaaactccatttattttgtcaaatggagaggatcttca 24647954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 31523739 - 31523663
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaa 77  Q
    |||||| ||||||||||| | ||||| |  ||||||||||||  |||||||||||||||| ||||||||| ||||||    
T  31523739 taattaatgatggtgggacccacttagtaataggacccaccacttattttttgtgtctatctctctccaaattgcaa 31523663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 100
Target Start/End: Complemental strand, 566834 - 566746
Alignment:
Q  12 ggtgggatctacttaatggtaggacccaccatctatttttt-gtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    ||||||| | |||||||| ||||| || |||| |||||||| || ||||| ||||||||| ||||||| |||||||| ||||||||||||    
T  566834 ggtgggacccacttaatgataggatccgccatatatttttttgtatctatctctctccaaattgcaaa-ctccatttattttgccaaatg 566746  T

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Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 42613084 - 42613160
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaa 77  Q
    |||||| ||||||||||| | ||||| || ||||||||||||  |||||||| ||||||| ||||| ||| ||||||    
T  42613084 taattaatgatggtgggacccacttagtgataggacccaccacttattttttttgtctatctctcttcaaattgcaa 42613160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 49679341 - 49679265
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaa 77  Q
    |||||| ||||||||||| | | ||| || |||||||| |||  |||||||||||||||| ||||||||| ||||||    
T  49679341 taattaatgatggtgggacccatttagtgataggacccgccacttattttttgtgtctatctctctccaaattgcaa 49679265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 12402970 - 12403061
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttctttt 92  Q
    |||||| | |||||||||   ||||| |||||| | |||||||||| ||||| | ||||| ||||||||||||||||| ||| |||| ||||    
T  12402970 taattaataatggtgggactcacttagtggtagaatccaccatctaatttttatatctatctctctccaacttgcaaaactctatttatttt 12403061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 111
Target Start/End: Original strand, 33632849 - 33632935
Alignment:
Q  24 ttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatggagaggatctt 111  Q
    ||||| |||||| |||| ||||||||| ||||||||| ||||||||| |||||   |||||||| || | ||||||||||| ||||||    
T  33632849 ttaatagtaggatccactatctattttatgtgtctatctctctccaaattgcatg-ctccatttattataccaaatggagaagatctt 33632935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 110
Target Start/End: Complemental strand, 28229450 - 28229365
Alignment:
Q  24 ttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatggagaggatct 110  Q
    |||||| |||||| ||||| ||||||||||||||||| ||| ||| | ||||| | |||||||| ||||   |||||||||||||||    
T  28229450 ttaatgataggactcaccacctattttttgtgtctatatctttcctaattgcaca-ctccatttattttaataaatggagaggatct 28229365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 88; Significance: 3e-42; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 13238685 - 13238800
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| ||||||||||| | ||||  ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  13238685 taattaatgatggtgggacccacttggtggtaggacccaccatctattttttgtgtctatctctctccaacttgcaaatctccatttattttgccaaatg 13238784  T
Q  101 gagaggatcttcatcc 116  Q
    ||||||||||||||||    
T  13238785 gagaggatcttcatcc 13238800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 35316829 - 35316941
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| ||||||||||| | ||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||    
T  35316829 taattaatgatggtgggacccacttagtggtaggatccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatg 35316928  T
Q  101 gagaggatcttca 113  Q
    |||||||||||||    
T  35316929 gagaggatcttca 35316941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 23259558 - 23259441
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| ||||||||||||| ||||| | ||||||||||||| ||||||||||||||||| ||||||||||||||||| | |||||| ||||||||||||    
T  23259558 taattaatgatggtgggatccacttagtagtaggacccaccagctattttttgtgtctatctctctccaacttgcaaaacaccatttattttgccaaatg 23259459  T
Q  101 gagaggatcttcatccca 118  Q
    ||||||||||||| ||||    
T  23259458 gagaggatcttcacccca 23259441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 28564896 - 28565008
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| ||||||||||| | ||||| ||||||||||||||||||||||||||||||||| ||||| ||||||  ||| |||||||| ||||||||||||    
T  28564896 taattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctatctctctacaacttaaaaaactccatttattttgccaaatg 28564995  T
Q  101 gagaggatcttca 113  Q
    |||||||||||||    
T  28564996 gagaggatcttca 28565008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 45625124 - 45625038
Alignment:
Q  27 atggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatggagaggatcttca 113  Q
    ||||| |||||||| || ||||| |||||||||| ||||||||||||| ||| |||||||| |||||||||||||||||||||||||    
T  45625124 atggtgggacccacaatttatttcttgtgtctatctctctccaacttgtaaaactccatttattttgccaaatggagaggatcttca 45625038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 41 - 113
Target Start/End: Original strand, 11864913 - 11864985
Alignment:
Q  41 catctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatggagaggatcttca 113  Q
    |||||||||||||||||||| ||||||||||||| ||| |||||||| |||||  ||||||||||||||||||    
T  11864913 catctattttttgtgtctatctctctccaacttgtaaaactccatttattttgataaatggagaggatcttca 11864985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 2063359 - 2063467
Alignment:
Q  3 attactgatggtgggatctacttaatggtaggaccca-ccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatgg 101  Q
    |||| ||||||||| | | ||||  |||||||||| | ||||||||||||||||||||| ||||||||| ||||||| ||| |||| ||||| ||||||     
T  2063359 attaatgatggtggaacccacttggtggtaggaccaaaccatctattttttgtgtctatctctctccaaattgcaaa-ctctatttattttgtcaaatga 2063457  T
Q  102 agaggatctt 111  Q
    ||||||||||    
T  2063458 agaggatctt 2063467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 30709115 - 30709183
Alignment:
Q  2 aattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaa 70  Q
    ||||| ||||||||||||| ||||| ||||||||||||  ||||||||| ||||||||| |||||||||    
T  30709115 aattaatgatggtgggatccacttagtggtaggacccaatatctattttatgtgtctatctctctccaa 30709183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 36929720 - 36929823
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| |||||| || ||| | ||||||||||||| ||| | ||||||| ||||||||| ||||||||| ||||| | |||||||| |||||| |||||    
T  36929720 taattaatgatggcggaatccatttaatggtaggacacactacctattttatgtgtctatctctctccaaattgcata-ctccatttattttgctaaatg 36929818  T
Q  101 gagag 105  Q
    |||||    
T  36929819 gagag 36929823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 40640706 - 40640783
Alignment:
Q  34 gacccaccatctatt-ttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatggagaggatct 110  Q
    ||||||||||||||| |||||| | ||| ||||||||| ||||||| |||||||| ||||  ||||||||||||||||    
T  40640706 gacccaccatctattcttttgtatatatctctctccaaattgcaaaactccatttattttaacaaatggagaggatct 40640783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 374997 - 375073
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaa 77  Q
    |||||| ||||||||||| | ||||| |  ||||||||||||  |||||||||||||||| ||||||||| ||||||    
T  374997 taattaatgatggtgggacccacttagtaataggacccaccacttattttttgtgtctatctctctccaaattgcaa 375073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 77
Target Start/End: Original strand, 13780509 - 13780579
Alignment:
Q  8 tgatggtgggatctacttaatggtaggacccaccatcta-ttttttgtgtctatttctctccaacttgcaa 77  Q
    ||||||||||||| ||||| || ||||||||||||  || |||||||||||||| ||||||||| ||||||    
T  13780509 tgatggtgggatccacttagtgataggacccaccacttatttttttgtgtctatctctctccaaattgcaa 13780579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 111
Target Start/End: Original strand, 35315527 - 35315615
Alignment:
Q  22 acttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatggagaggatctt 111  Q
    |||||||| |||||||||||| ||||| ||||||| ||| ||||||||| |||||  | ||||||| ||||   ||||||||||||||||    
T  35315527 acttaatgataggacccaccacctattgtttgtgtttatctctctccaaattgcatct-tccatttatttttataaatggagaggatctt 35315615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 8988859 - 8988935
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaa 77  Q
    |||||| ||||||||||| | ||||| || ||||||| | ||  |||||||||||||||| ||||||||| ||||||    
T  8988859 taattaatgatggtgggacccacttagtgataggacctatcacttattttttgtgtctatctctctccaaattgcaa 8988935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 23459917 - 23459841
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaa 77  Q
    |||||| ||||||||||| | | ||| || |||||||| |||  |||||||||||||||| ||||||||| ||||||    
T  23459917 taattaatgatggtgggacccatttagtgataggacccgccacttattttttgtgtctatctctctccaaattgcaa 23459841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 30857749 - 30857642
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| |||||||| |||| | ||||| |||||| |||  ||||||||||||||||||  ||||| ||| || || | |||||||| |||||  |||||    
T  30857749 taattaatgatggtgtgatccatttaatagtaggatccattatctattttttgtgtctacctctcttcaaattacata-ctccatttattttgtgaaatg 30857651  T
Q  101 gagaggatc 109  Q
    |||||||||    
T  30857650 gagaggatc 30857642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 15709772 - 15709874
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| ||||| ||| | | |||||||||||||| |||| ||||||||| | ||| ||| ||||||||| ||||| || ||||||| |||||| ||||     
T  15709772 taattaatgatgatggaacccacttaatggtaggatccactatctattttatatgtttatctctctccaaattgcatat-tccatttattttgctaaatc 15709870  T
Q  101 gaga 104  Q
    ||||    
T  15709871 gaga 15709874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 21454565 - 21454476
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttctttt 92  Q
    |||||| ||||||||| | | ||||||||||| ||||||| ||||| ||||||||||||| |||||| || || |||| |||||||| ||||    
T  21454565 taattaatgatggtggaacccacttaatggtatgacccacaatcta-tttttgtgtctatctctctctaaattacaaa-ctccatttatttt 21454476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 19908784 - 19908892
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| ||||||||||| | ||||||  ||||||| ||| ||||||||| ||||||||| || |||||| ||||| | |||||||| || |  ||||||    
T  19908784 taattaatgatggtgggacccacttaaaagtaggactcactatctattttatgtgtctatctc-ctccaaattgcata-ctccatttattatatcaaatg 19908881  T
Q  101 gagaggatctt 111  Q
     ||||||||||    
T  19908882 aagaggatctt 19908892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 38397085 - 38397194
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| |||||||||||   ||||||| |||| |||||| ||||||||| | ||||||| ||||| ||| ||||| | |||| ||| || | | |||||    
T  38397085 taattattgatggtgggactcacttaatagtagcacccactatctattttatttgtctatctctcttcaaattgcata-ctccgtttattatacaaaatg 38397183  T
Q  101 gagaggatctt 111  Q
    |||||||||||    
T  38397184 gagaggatctt 38397194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 77
Target Start/End: Complemental strand, 40254214 - 40254144
Alignment:
Q  8 tgatggtgggatctacttaatggtaggacccaccatctatt-ttttgtgtctatttctctccaacttgcaa 77  Q
    ||||||||||||| ||||| || ||||||||||||  |||| |||||||||||| |||| |||| ||||||    
T  40254214 tgatggtgggatccacttagtgataggacccaccacttattattttgtgtctatctctccccaaattgcaa 40254144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 108
Target Start/End: Complemental strand, 4446940 - 4446860
Alignment:
Q  28 tggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatggagaggat 108  Q
    |||||||| |||| ||||||||| ||||||||| ||||| ||| ||| | |  ||||||| ||||  ||||||||||||||    
T  4446940 tggtaggatccactatctattttatgtgtctatctctcttcaaattgtacacttccatttattttatcaaatggagaggat 4446860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 111
Target Start/End: Complemental strand, 36758902 - 36758823
Alignment:
Q  31 taggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatggagaggatctt 111  Q
    ||||| ||||||  || ||||||||||||| ||||||||| |||||| | ||||||| ||||   ||||||||||||||||    
T  36758902 taggatccaccacttactttttgtgtctatctctctccaaattgcaact-tccatttatttttataaatggagaggatctt 36758823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 87; Significance: 1e-41; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 50294134 - 50294016
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| ||||||| ||||| ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  50294134 taattaatgatggtaggatccacttagtggtaggacccaccatctattttttgtgtctatctctctccaacttgcaaatctccatttattttgccaaatg 50294035  T
Q  101 gagaggatcttcatcccac 119  Q
     |||||||||||| |||||    
T  50294034 aagaggatcttcaccccac 50294016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 50484390 - 50484502
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| ||| ||||||| | ||||| |||| | |||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||    
T  50484390 taattaatgacggtgggacccacttagtggttgtacccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatg 50484489  T
Q  101 gagaggatcttca 113  Q
    |||||||||||||    
T  50484490 gagaggatcttca 50484502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 48327224 - 48327108
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| ||||||||| | | ||||| ||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||    
T  48327224 taattaatgatggtgg-acccacttagtggtaggactcaccatctattttttttgtctatctctctccaacttgcaaatctccatttattttgccaaatg 48327126  T
Q  101 gagaggatcttcatccca 118  Q
    |||| |||||||| ||||    
T  48327125 gagatgatcttcacccca 48327108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 12151771 - 12151883
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| ||||||||||| | ||||| ||||||||||||| ||||||||||||||||| | ||||||||||| ||||| |||||||| ||||||||||||    
T  12151771 taattaatgatggtgggacccacttagtggtaggacccacaatctattttttgtgtctttctctctccaactggcaaaactccatttattttgccaaatg 12151870  T
Q  101 gagaggatcttca 113  Q
    |||| ||||||||    
T  12151871 gagaagatcttca 12151883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 42 - 113
Target Start/End: Complemental strand, 12380907 - 12380836
Alignment:
Q  42 atctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatggagaggatcttca 113  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  12380907 atctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttca 12380836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 42 - 113
Target Start/End: Complemental strand, 12384974 - 12384903
Alignment:
Q  42 atctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatggagaggatcttca 113  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  12384974 atctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttca 12384903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 23862026 - 23861911
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggac---ccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaa 97  Q
    |||||| ||||||||||||| ||||| ||||||||    |||||||||||||||||||||||| ||||||||||||||||| || ||||| |||||| ||    
T  23862026 taattaatgatggtgggatccacttagtggtaggattcaccaccatctattttttgtgtctatctctctccaacttgcaaaacttcatttattttgctaa 23861927  T
Q  98 atggagaggatcttca 113  Q
    || |||||||| ||||    
T  23861926 atagagaggatattca 23861911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 18976376 - 18976265
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctatt-ttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaat 99  Q
    |||||| ||||| ||||| |||||||||||| ||| |||||||||||| |||||||||||| ||||||||| ||||||| ||| |||| ||||  |||||    
T  18976376 taattaatgatgatgggacctacttaatggttggatccaccatctattcttttgtgtctatctctctccaaattgcaaaactcaatttattttagcaaat 18976277  T
Q  100 ggagaggatctt 111  Q
    ||||||||||||    
T  18976276 ggagaggatctt 18976265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 23 - 113
Target Start/End: Complemental strand, 7840728 - 7840638
Alignment:
Q  23 cttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatggagaggatcttca 113  Q
    ||||||||||||||||| ||||||||| |||||||||| |||||||||||| |||| |||||||| || ||||||||| | ||||||||||    
T  7840728 cttaatggtaggacccatcatctatttcttgtgtctatctctctccaacttacaaaactccatttattctgccaaatgaataggatcttca 7840638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 8 - 112
Target Start/End: Original strand, 40328289 - 40328390
Alignment:
Q  8 tgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatggagagga 107  Q
    ||||||||| | | ||||| |||| ||||||||||||||||||| ||||||||  |||||||| ||||||| |||||||| |||||||||||||||||||    
T  40328289 tgatggtggaacccacttagtggtgggacccaccatctattttt-gtgtctat--ctctccaatttgcaaaactccatttattttgccaaatggagagga 40328385  T
Q  108 tcttc 112  Q
    |||||    
T  40328386 tcttc 40328390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 33 - 113
Target Start/End: Original strand, 45978041 - 45978121
Alignment:
Q  33 ggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatggagaggatcttca 113  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||| |||||||| ||||  ||||| |||||||||||||    
T  45978041 ggacccaccatctattttttgtatctatctctctccaacttgcaaaactccatttattttatcaaatagagaggatcttca 45978121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 2 - 113
Target Start/End: Complemental strand, 32361377 - 32361266
Alignment:
Q  2 aattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatgg 101  Q
    ||||| ||||| ||||| ||||||| | |||||| ||||||||||| ||||||||| || |||||||||||| |||| ||| | || |||  ||||||||    
T  32361377 aattaatgatgatgggacctacttagtagtaggatccaccatctatcttttgtgtccatctctctccaacttacaaaactctaattatttcaccaaatgg 32361278  T
Q  102 agaggatcttca 113  Q
    ||||||| ||||    
T  32361277 agaggattttca 32361266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 52280110 - 52280034
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaa 77  Q
    |||||| ||||||||||||| ||||| || ||||||||||||  |||||||| ||||||| ||||||||| ||||||    
T  52280110 taattaatgatggtgggatccacttagtgataggacccaccacttattttttatgtctatctctctccaaattgcaa 52280034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 256
Target Start/End: Complemental strand, 52724361 - 52724266
Alignment:
Q  161 gataaatgtctttttgtatgtgcctaaatagtaaacgctacatttggtcatgcgaccataacattgactaatcattccaaatattaagatccattt 256  Q
    ||||| |||||||||||||||||||||| ||||||| ||| |||||||| || ||||  | ||  |||||||||||| |||||||| |||| ||||    
T  52724361 gataagtgtctttttgtatgtgcctaaagagtaaacactagatttggtcgtgtgaccgaagcaaagactaatcattcgaaatattatgatcaattt 52724266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 24413353 - 24413294
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctat 60  Q
    |||||| ||||||||||| | | |||||| |||||||||||||| |||||||||||||||    
T  24413353 taattaatgatggtgggacccatttaatgataggacccaccatccattttttgtgtctat 24413294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 32618805 - 32618913
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| ||||||||||| ||||||||| |||||| |||| ||||| ||| | |||| || ||||||||| ||| | | |||||||| || |||||||||    
T  32618805 taattaatgatggtgggacctacttaatagtaggatccactatcta-tttatatgtccatctctctccaaattggata-ctccatttattatgccaaatg 32618902  T
Q  101 gagaggatctt 111  Q
     ||||||||||    
T  32618903 aagaggatctt 32618913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 12380981 - 12380924
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtct 58  Q
    |||||| |||||||||||   ||||| |||||| ||||||||||||||||||||||||    
T  12380981 taattaatgatggtgggactcacttagtggtagaacccaccatctattttttgtgtct 12380924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 12385048 - 12384991
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtct 58  Q
    |||||| |||||||||||   ||||| |||||| ||||||||||||||||||||||||    
T  12385048 taattaatgatggtgggactcacttagtggtagaacccaccatctattttttgtgtct 12384991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 24977265 - 24977310
Alignment:
Q  22 acttaatggtaggacccaccatctattttttgtgtctatttctctc 67  Q
    ||||| |||||||| |||||||||||||||||||||||| ||||||    
T  24977265 acttagtggtaggatccaccatctattttttgtgtctatctctctc 24977310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 39426214 - 39426283
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaa 70  Q
    |||||| |||| |||||| | | ||| ||||||||||||| ||||||||| ||||||||| |||||||||    
T  39426214 taattaatgatagtgggacccaattagtggtaggacccactatctattttatgtgtctatctctctccaa 39426283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 77
Target Start/End: Complemental strand, 6948896 - 6948825
Alignment:
Q  8 tgatggtgggatctacttaatggtaggacccacca--tctattttttgtgtctatttctctccaacttgcaa 77  Q
    ||||||||||||| ||||| || ||||||||||||  | |||||||| ||||||| ||||||||| ||||||    
T  6948896 tgatggtgggatccacttagtgataggacccaccacttatattttttttgtctatctctctccaaattgcaa 6948825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 77
Target Start/End: Complemental strand, 18107386 - 18107316
Alignment:
Q  8 tgatggtgggatctacttaatggtaggacccaccatctatttttt-gtgtctatttctctccaacttgcaa 77  Q
    ||||||||||||| | ||| || ||||||||||||  |||||||| |||||||| ||||||||| ||||||    
T  18107386 tgatggtgggatccatttagtgataggacccaccacttatttttttgtgtctatctctctccaaattgcaa 18107316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 113
Target Start/End: Complemental strand, 30860794 - 30860728
Alignment:
Q  47 ttttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatggagaggatcttca 113  Q
    |||||| ||||||| ||||||||||||||||| |||||||  |||||| |||||  || ||||||||    
T  30860794 ttttttatgtctatatctctccaacttgcaaaactccattcattttgctaaatgatgaagatcttca 30860728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 120
Target Start/End: Original strand, 27982079 - 27982174
Alignment:
Q  24 ttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatggagaggatcttcatcccacg 120  Q
    |||||| | ||||||| ||| |||||||| ||||||| ||||||||| |||||  | ||||||| ||||   |||||||||||||||| | ||||||    
T  27982079 ttaatgatgggacccaacatatattttttatgtctatatctctccaaattgcatct-tccatttatttttataaatggagaggatcttaaccccacg 27982174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 30077715 - 30077639
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaa 77  Q
    |||||| |||| ||||||   ||||| || ||| ||||||||  |||||||||||||||| ||||||||| ||||||    
T  30077715 taattaatgatagtgggactcacttagtgatagaacccaccacttattttttgtgtctatctctctccaaattgcaa 30077639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 86; Significance: 4e-41; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 28069723 - 28069840
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| ||||||||||| | ||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||    
T  28069723 taattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatg 28069822  T
Q  101 gagaggatcttcatccca 118  Q
    ||||||||||||| ||||    
T  28069823 gagaggatcttcacccca 28069840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 30426740 - 30426628
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| ||||||||||| | ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||| ||||||||||||    
T  30426740 taattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctatctctctccaacttgcaaaacaccatttattttgccaaatg 30426641  T
Q  101 gagaggatcttca 113  Q
    |||||| ||||||    
T  30426640 gagagggtcttca 30426628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 36991360 - 36991472
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| ||||||||||| | ||||| |||||||||||| ||||||||| || ||||||| ||||||||||||||||| |||||||| ||||||||||||    
T  36991360 taattaatgatggtgggacccacttagtggtaggacccatcatctatttcttatgtctatctctctccaacttgcaaaactccatttattttgccaaatg 36991459  T
Q  101 gagaggatcttca 113  Q
    |||||||||||||    
T  36991460 gagaggatcttca 36991472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 10672583 - 10672473
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| |||||||||||   ||||| |||||||| ||||||||||||||||||||||||  |||||||||||||||| |||||||| ||||||||||||    
T  10672583 taattaatgatggtgggactcacttagtggtaggatccaccatctattttttgtgtctat--ctctccaacttgcaaaactccatttattttgccaaatg 10672486  T
Q  101 gagaggatcttca 113  Q
    ||||| |||||||    
T  10672485 gagagaatcttca 10672473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 10652688 - 10652576
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| ||||||||||| | | ||| | ||| ||||||||||| ||||||||| ||||| ||||||||||||||||| | |||||| |||| |||||||    
T  10652688 taattaatgatggtgggacccaattagtagtatgacccaccatcaattttttgtatctatctctctccaacttgcaaaacaccatttattttaccaaatg 10652589  T
Q  101 gagaggatcttca 113  Q
    |||||||||||||    
T  10652588 gagaggatcttca 10652576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 22 - 113
Target Start/End: Complemental strand, 40695297 - 40695207
Alignment:
Q  22 acttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatggagaggatcttca 113  Q
    ||||| |||||||||| |||||||||||||||||||||| |||||||||||| |||| |||||||| |||||| ||||||||| ||||||||    
T  40695297 acttagtggtaggacctaccatctattttttgtgtctatctctctccaacttccaaa-ctccatttattttgctaaatggagaagatcttca 40695207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 44859238 - 44859126
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| ||||||||||| | ||||| |||||| ||||||||||||||||| ||  |||| |||||| |||||||||| |||||||| ||||| |||||     
T  44859238 taattaatgatggtgggacccacttagtggtagaacccaccatctatttttagt--ctatctctctctaacttgcaaaactccatttattttgtcaaata 44859141  T
Q  101 gagaggatcttcatc 115  Q
    |||||||||||||||    
T  44859140 gagaggatcttcatc 44859126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 111
Target Start/End: Complemental strand, 37966487 - 37966405
Alignment:
Q  28 tggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatggagaggatctt 111  Q
    |||||||||| || ||||||||||||||| ||| ||||| ||| |||||||| ||||||| |||||||||||||||||||||||    
T  37966487 tggtaggacctacaatctattttttgtgtttatctctcttcaaattgcaaat-tccatttattttgccaaatggagaggatctt 37966405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 116
Target Start/End: Original strand, 6014213 - 6014314
Alignment:
Q  16 ggatctacttaatggtaggacccaccatctatt-ttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatggagaggatcttcat 114  Q
    ||||| |||||||||||||||| | |||||||| |||||||||||| | ||||||| ||||||| ||| |||| ||||  ||||||||||||||||| ||    
T  6014213 ggatccacttaatggtaggacctatcatctattcttttgtgtctatctttctccaaattgcaaaactctatttattttagcaaatggagaggatcttaat 6014312  T
Q  115 cc 116  Q
    ||    
T  6014313 cc 6014314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 41511266 - 41511373
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| ||||||||| | | ||||| || |||||||||| ||||||||||| | ||||| ||| ||||||||||||| |||||||| |||||  ||| |    
T  41511266 taattaatgatggtggaaaccacttagtgataggacccactatctattttttatatctatctctttccaacttgcaaaactccatttattttgttaaacg 41511365  T
Q  101 gagaggat 108  Q
    ||||||||    
T  41511366 gagaggat 41511373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 45113274 - 45113385
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctatt-ttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaat 99  Q
    |||||| ||||| |||||   ||||| |||| |||||||||||||||| |||||||||||| ||||||||| ||||||| | | |||| ||||  |||||    
T  45113274 taattaatgatgatgggacacacttagtggttggacccaccatctattcttttgtgtctatgtctctccaaattgcaaaacacaatttattttagcaaat 45113373  T
Q  100 ggagaggatctt 111  Q
    ||||||||||||    
T  45113374 ggagaggatctt 45113385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 113
Target Start/End: Original strand, 5033310 - 5033368
Alignment:
Q  55 gtctatttctctccaacttgcaaatctccatttcttttgccaaatggagaggatcttca 113  Q
    |||||| ||||||||||||||||| |||||||| |||||||||||||| ||||||||||    
T  5033310 gtctatctctctccaacttgcaaaactccatttattttgccaaatggaaaggatcttca 5033368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 26749619 - 26749543
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaa 77  Q
    |||||| ||||||||||| | ||||| || ||||||||| ||  |||||||||||||||| ||||||||| ||||||    
T  26749619 taattaatgatggtgggacccacttagtgataggacccatcacttattttttgtgtctatctctctccaaattgcaa 26749543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 78
Target Start/End: Complemental strand, 12177626 - 12177575
Alignment:
Q  27 atggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaa 78  Q
    ||||| ||| |||||||||||||||||| ||||| |||||||||||||||||    
T  12177626 atggtgggatccaccatctattttttgtatctatctctctccaacttgcaaa 12177575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 78
Target Start/End: Complemental strand, 12422054 - 12422003
Alignment:
Q  27 atggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaa 78  Q
    ||||| ||| |||||||||||||||||| ||||| |||||||||||||||||    
T  12422054 atggtgggatccaccatctattttttgtatctatctctctccaacttgcaaa 12422003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 60
Target Start/End: Original strand, 5033109 - 5033147
Alignment:
Q  22 acttaatggtaggacccaccatctattttttgtgtctat 60  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  5033109 acttagtggtaggacccaccatctattttttgtgtctat 5033147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 77
Target Start/End: Complemental strand, 17867724 - 17867654
Alignment:
Q  8 tgatggtgggatctacttaatggtaggacccaccatcta-ttttttgtgtctatttctctccaacttgcaa 77  Q
    ||||||||||||| ||||| || ||||||||||||  || |||||||||||||| ||||||||| ||||||    
T  17867724 tgatggtgggatccacttagtgataggacccaccacttatttttttgtgtctatctctctccaaattgcaa 17867654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 24102020 - 24102097
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaa 78  Q
    |||||| ||||||||| |   ||||| |||||||| |||||||||||||||| ||||||| |||||  ||||||||||    
T  24102020 taattaatgatggtggaactcacttagtggtaggatccaccatctattttttatgtctatctctcttaaacttgcaaa 24102097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 36748562 - 36748494
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaa 70  Q
    |||||| ||||||||||||| ||||||||||||||||| |  |||| ||||||||||||| | |||||||    
T  36748562 taattaatgatggtgggatccacttaatggtaggacccgctgtcta-tttttgtgtctatctatctccaa 36748494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 18689495 - 18689597
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| ||||| ||| | | |||||||||||||| |||| ||||||||| | ||| ||| ||||||||| ||||| || ||||||| |||||| ||||     
T  18689495 taattaatgatgatggaacccacttaatggtaggatccactatctattttatatgtttatctctctccaaattgcatat-tccatttattttgctaaatc 18689593  T
Q  101 gaga 104  Q
    ||||    
T  18689594 gaga 18689597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 34612568 - 34612634
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctc 67  Q
    |||||| |||||||| || | ||||| || ||||||||||||  |||||||||||||||| ||||||    
T  34612568 taattaatgatggtgagacccacttagtgataggacccaccacttattttttgtgtctatctctctc 34612634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 11090512 - 11090556
Alignment:
Q  8 tgatggtgggatctacttaatggtaggacccaccatctatttttt 52  Q
    ||||||||||||| |||||||| ||||||||||||  ||||||||    
T  11090512 tgatggtgggatccacttaatgataggacccaccacttatttttt 11090556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 86; Significance: 4e-41; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 4888471 - 4888588
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| ||||||||||| ||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||    
T  4888471 taattaatgatggtgggacctacttagtggtaggacccactatctattttttgtgtctatctctctccaacttgcaaatctccatttattttgtcaaatg 4888570  T
Q  101 gagaggatcttcatccca 118  Q
    ||||||||||||| ||||    
T  4888571 gagaggatcttcacccca 4888588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 9559125 - 9559013
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| ||||||||||| | ||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||    
T  9559125 taattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtatctatctctctccaacttgcaaatctccatttattttgccaaatg 9559026  T
Q  101 gagaggatcttca 113  Q
    |||||||||||||    
T  9559025 gagaggatcttca 9559013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 21151156 - 21151268
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| ||||||||||| | ||||| |||||||| || |||||||||| |||||||||| ||||||||||||||||| |||||||| ||||||||||||    
T  21151156 taattaatgatggtgggacccacttagtggtaggatcctccatctatttcttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatg 21151255  T
Q  101 gagaggatcttca 113  Q
    |||||||||||||    
T  21151256 gagaggatcttca 21151268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 45260498 - 45260386
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| ||||| ||||||| ||||| |||||||| |||| ||||||||||||||||||| ||||||||||||||||| ||| |||| ||||||||||||    
T  45260498 taattaatgatgatgggatccacttagtggtaggatccacaatctattttttgtgtctatctctctccaacttgcaaaactcaatttattttgccaaatg 45260399  T
Q  101 gagaggatcttca 113  Q
    |||||||||||||    
T  45260398 gagaggatcttca 45260386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 12139330 - 12139443
Alignment:
Q  1 taattactgatggtgggatct-acttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaat 99  Q
    |||||| ||||||||||| |  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||| |||||||||||    
T  12139330 taattaatgatggtgggaccccacttaatggtaggacccaccatctattttttgtgtctatctctctccaacttgcaaaacttcatttattttgccaaat 12139429  T
Q  100 ggagaggatcttca 113  Q
    | |||| |||||||    
T  12139430 gaagagaatcttca 12139443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 18198260 - 18198372
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| |||||||||||   ||||| ||| || |||||||||||||||||||||||||||| ||||||| ||||||| |||||||| ||||||||||||    
T  18198260 taattaatgatggtgggactcacttagtggcagaacccaccatctattttttgtgtctatttatctccaatttgcaaaactccatttattttgccaaatg 18198359  T
Q  101 gagaggatcttca 113  Q
    |||||||||||||    
T  18198360 gagaggatcttca 18198372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 16366522 - 16366634
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| |||||||||||   ||||| |||||||| ||||||||||||| || ||||||| ||||||||||||||||| |||||||| ||||| ||||||    
T  16366522 taattaatgatggtgggacacacttagtggtaggatccaccatctatttcttatgtctatctctctccaacttgcaaaactccatttattttgtcaaatg 16366621  T
Q  101 gagaggatcttca 113  Q
    |||||||||||||    
T  16366622 gagaggatcttca 16366634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 118
Target Start/End: Original strand, 44647989 - 44648085
Alignment:
Q  22 acttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatggagaggatcttcatccca 118  Q
    ||||| |||| ||| |||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||| ||||||||||||||||||| ||||    
T  44647989 acttagtggtcggatccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcacccca 44648085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 47226145 - 47226035
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| ||||||||||| | | ||| |||| |||||||||||  ||||||||||| ||| ||||||||||||||||| |||||||| ||||||||||||    
T  47226145 taattaatgatggtgggacccatttagtggtgggacccaccat--attttttgtgtttatctctctccaacttgcaaaactccatttattttgccaaatg 47226048  T
Q  101 gagaggatcttca 113  Q
    |||||||||||||    
T  47226047 gagaggatcttca 47226035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 7362572 - 7362676
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| ||||||||| | | | ||| ||||| ||||||||||||||||||||||||||| ||||||||| ||||||| |||||||| ||||| ||||||    
T  7362572 taattaatgatggtggaacccatttagtggtacgacccaccatctattttttgtgtctatctctctccaatttgcaaaactccatttattttgtcaaatg 7362671  T
Q  101 gagag 105  Q
    |||||    
T  7362672 gagag 7362676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 25084799 - 25084690
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctcca--tttcttttgccaaa 98  Q
    |||||| ||||||||||| | ||||| ||||||||||||||||||||||||||||||||| |||||||||||| |||| ||  |  ||| |||| |||||    
T  25084799 taattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctatctctctccaacttacaaaactttatttttttttttccaaa 25084700  T
Q  99 tggagaggat 108  Q
    ||||||||||    
T  25084699 tggagaggat 25084690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 989133 - 989239
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| | ||||| ||| ||||||| ||||||||||||| || |||||||||||||||| ||||||||| ||||||| ||||||||  |||| ||||||    
T  989133 taattaattatggttggacctacttagtggtaggacccactatatattttttgtgtctatctctctccaaattgcaaa-ctccatttaatttgtcaaatg 989231  T
Q  101 gagaggat 108  Q
    ||||||||    
T  989232 gagaggat 989239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 33450510 - 33450621
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctatt-ttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaat 99  Q
    |||||| ||||| ||||| | ||||| |||| |||||||||||||||| |||||||||||| ||||||||| ||||||| ||| |||| ||||  |||||    
T  33450510 taattaatgatgatgggacccacttagtggttggacccaccatctattcttttgtgtctatctctctccaaattgcaaaactcaatttattttagcaaat 33450609  T
Q  100 ggagaggatctt 111  Q
    ||||||||||||    
T  33450610 ggagaggatctt 33450621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 39 - 115
Target Start/End: Complemental strand, 47271180 - 47271105
Alignment:
Q  39 accatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatggagaggatcttcatc 115  Q
    |||||| ||||||||||||||| ||||||||| ||||||| |||||||| |||||| ||||||||||||||||||||    
T  47271180 accatcaattttttgtgtctatctctctccaaattgcaaa-ctccatttattttgctaaatggagaggatcttcatc 47271105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 47500354 - 47500243
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctatt-ttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaat 99  Q
    |||||| ||||| ||||| | ||||| |||| |||||||||||||||| |||||||||||| ||||||||| || |||| ||| |||| ||||   ||||    
T  47500354 taattaatgatgatgggacccacttagtggttggacccaccatctattcttttgtgtctatctctctccaaattacaaaactcaatttattttagtaaat 47500255  T
Q  100 ggagaggatctt 111  Q
    ||||||||||||    
T  47500254 ggagaggatctt 47500243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 29631052 - 29631156
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| |||| |||||| |||| || |||| |||||||| |||||| |||||||||||  ||||| ||| ||||||| |||||||| |||| |||||||    
T  29631052 taattaatgatagtgggacctacatagtggttggacccactatctatgttttgtgtcta--tctcttcaaattgcaaa-ctccatttattttaccaaatg 29631148  T
Q  101 gagaggat 108  Q
    ||||||||    
T  29631149 gagaggat 29631156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 8 - 76
Target Start/End: Original strand, 32915967 - 32916035
Alignment:
Q  8 tgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgca 76  Q
    |||||||||||   ||||||||||||||||||| || |||||||||||||||| ||||| ||| |||||    
T  32915967 tgatggtgggactcacttaatggtaggacccactatttattttttgtgtctatctctcttcaaattgca 32916035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 47799971 - 47799895
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaa 77  Q
    |||||| ||||||||||| | ||||| || ||||||||| ||  |||||||||||||||| ||||||||| ||||||    
T  47799971 taattaatgatggtgggacccacttagtgataggacccatcacttattttttgtgtctatctctctccaaattgcaa 47799895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 70
Target Start/End: Complemental strand, 19027748 - 19027685
Alignment:
Q  8 tgatggtgggatctacttaatggtaggacccaccatcta-ttttttgtgtctatttctctccaa 70  Q
    ||||||||||||| ||||| || ||||||||||||| || |||||||||||||| |||||||||    
T  19027748 tgatggtgggatccacttagtgataggacccaccatttatttttttgtgtctatctctctccaa 19027685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 70
Target Start/End: Original strand, 20726888 - 20726951
Alignment:
Q  8 tgatggtgggatctacttaatggtaggacccaccatcta-ttttttgtgtctatttctctccaa 70  Q
    ||||||||||||| ||||| || ||||||||||||| || |||||||||||||| |||||||||    
T  20726888 tgatggtgggatccacttagtgataggacccaccatttatttttttgtgtctatctctctccaa 20726951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 108
Target Start/End: Complemental strand, 34985984 - 34985909
Alignment:
Q  34 gacccaccatctatt-ttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatggagaggat 108  Q
    ||||||||||||||| |||||||||||| ||||||||| ||||||| ||| |||| ||||  ||||| ||||||||    
T  34985984 gacccaccatctattcttttgtgtctatctctctccaaattgcaaaactcaatttattttagcaaattgagaggat 34985909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 7373872 - 7373946
Alignment:
Q  2 aattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgca 76  Q
    ||||| |||| |||||||||||||||| ||| |||||||  ||||||||||||  |||| ||||||||| |||||    
T  7373872 aattaatgatagtgggatctacttaatagtaagacccactgtctattttttgtacctatctctctccaaattgca 7373946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 77
Target Start/End: Complemental strand, 14696822 - 14696752
Alignment:
Q  8 tgatggtgggatctacttaatggtaggacccaccatcta-ttttttgtgtctatttctctccaacttgcaa 77  Q
    ||||||||||||| ||||| || ||||||||||||  || |||||||||||||| ||||||||| ||||||    
T  14696822 tgatggtgggatccacttagtgataggacccaccacttatttttttgtgtctatctctctccaaattgcaa 14696752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 46802392 - 46802336
Alignment:
Q  11 tggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctc 67  Q
    |||||||| | ||||| |||||||||||||| |||||||||| ||||||| ||||||    
T  46802392 tggtgggacccacttagtggtaggacccaccgtctattttttatgtctatctctctc 46802336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 77
Target Start/End: Original strand, 30102504 - 30102574
Alignment:
Q  8 tgatggtgggatctacttaatggtaggacccaccatcta-ttttttgtgtctatttctctccaacttgcaa 77  Q
    ||||||||||||| ||||| || ||||||||||||  || |||||| ||||||| ||||||||| ||||||    
T  30102504 tgatggtgggatccacttagtgataggacccaccacttatttttttttgtctatctctctccaaattgcaa 30102574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 104
Target Start/End: Complemental strand, 33608901 - 33608845
Alignment:
Q  47 ttttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatggaga 104  Q
    |||||||||| ||| ||||||||| ||||||| |||||||| |||| |||||||||||    
T  33608901 ttttttgtgtttatctctctccaaattgcaaa-ctccatttattttaccaaatggaga 33608845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 35737149 - 35737193
Alignment:
Q  33 ggacccaccatctattttttgtgtctatttctctccaacttgcaa 77  Q
    ||||||||||  |||||||||||||||| ||||||||| ||||||    
T  35737149 ggacccaccacttattttttgtgtctatctctctccaaattgcaa 35737193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 85; Significance: 2e-40; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 18625492 - 18625380
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| ||||||||||| | ||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||    
T  18625492 taattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatg 18625393  T
Q  101 gagaggatcttca 113  Q
    |||||||||||||    
T  18625392 gagaggatcttca 18625380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 35660680 - 35660568
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| ||||||||||| | ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||    
T  35660680 taattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatg 35660581  T
Q  101 gagaggatcttca 113  Q
    |||||||||||||    
T  35660580 gagaggatcttca 35660568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 37266735 - 37266852
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| ||||||||||| | ||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||    
T  37266735 taattaatgatggtgggacccacttagtggtatgacccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatg 37266834  T
Q  101 gagaggatcttcatccca 118  Q
    ||||||||||||| ||||    
T  37266835 gagaggatcttcacccca 37266852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 11775797 - 11775912
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| ||| ||||||| | ||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||| |||||||| |||| |||||||    
T  11775797 taattaatgacggtgggacccacttagtggtaggatccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttaccaaatg 11775896  T
Q  101 gagaggatcttcatcc 116  Q
    ||||||||||||||||    
T  11775897 gagaggatcttcatcc 11775912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 13032122 - 13032234
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| ||||||||||| | | ||| ||||||||| |||||||||||| |||||||||| ||||||||||||||||| |||||||| ||||||||||||    
T  13032122 taattaatgatggtgggacccatttagtggtaggactcaccatctatttcttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatg 13032221  T
Q  101 gagaggatcttca 113  Q
    |||||||||||||    
T  13032222 gagaggatcttca 13032234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 32129688 - 32129576
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| ||||||||||| | ||||| |||||||||||||||||||||||| |||||||| ||||||||||||  ||| |||||||| ||||||||||||    
T  32129688 taattaatgatggtgggacccacttagtggtaggacccaccatctatttttggtgtctatctctctccaacttataaaactccatttattttgccaaatg 32129589  T
Q  101 gagaggatcttca 113  Q
    |||||||||||||    
T  32129588 gagaggatcttca 32129576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 4895806 - 4895699
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| ||||||||||| | ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||     
T  4895806 taattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaata 4895707  T
Q  101 gagaggat 108  Q
     |||||||    
T  4895706 aagaggat 4895699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 14349807 - 14349924
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| ||||||||||| | ||||| ||||||||||||||||||||||||||||||| | |||||||||||| |||| |||||||| |||| ||||||     
T  14349807 taattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctgtctctctccaacttacaaaactccatttattttaccaaata 14349906  T
Q  101 gagaggatcttcatccca 118  Q
    ||||||||||||| ||||    
T  14349907 gagaggatcttcacccca 14349924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 40753233 - 40753116
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| ||||||||||| | ||||| |||||||||||||||| |||||||||||||||| | ||||||||||||||| ||  |||| |||||||||||     
T  40753233 taattaatgatggtgggacccacttagtggtaggacccaccatatattttttgtgtctatctttctccaacttgcaaaactttatttattttgccaaata 40753134  T
Q  101 gagaggatcttcatccca 118  Q
    ||||||||||||| ||||    
T  40753133 gagaggatcttcacccca 40753116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 9 - 113
Target Start/End: Original strand, 34827204 - 34827308
Alignment:
Q  9 gatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatggagaggat 108  Q
    |||||||||| | ||||| |||||||| |||||||||||||||| ||||||| ||||||||||||||| | |||||||| |||||| ||||||||| |||    
T  34827204 gatggtgggacccacttagtggtaggatccaccatctattttttttgtctatctctctccaacttgcataactccatttattttgctaaatggagatgat 34827303  T
Q  109 cttca 113  Q
    |||||    
T  34827304 cttca 34827308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 39902419 - 39902531
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| ||||||||| ||| | ||| |||||||||||||||||||||| |||||| ||| ||||||||||||| ||| |||||||| ||||| ||||||    
T  39902419 taattaatgatggtggaatccatttagtggtaggacccaccatctatttcttgtgtttatctctctccaacttgtaaaactccatttattttgtcaaatg 39902518  T
Q  101 gagaggatcttca 113  Q
    ||||||| |||||    
T  39902519 gagaggaacttca 39902531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 29340999 - 29341108
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| ||||||||||| | ||||||| ||||||||||| ||||||||| ||||||||| ||||||||| ||||| | |||||||| || | |||||||    
T  29340999 taattaatgatggtgggacccacttaatagtaggacccactatctattttctgtgtctatctctctccaaattgcata-ctccatttattataccaaatg 29341097  T
Q  101 gagaggatctt 111  Q
    |||||||||||    
T  29341098 gagaggatctt 29341108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 113
Target Start/End: Original strand, 43309113 - 43309224
Alignment:
Q  2 aattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatgg 101  Q
    ||||| ||||||||| | | | ||||||||| || |||| ||||||||||| ||||||| ||||||||||||||||| |||||||| ||||  |||||      
T  43309113 aattaatgatggtggaacccatttaatggtaagatccactatctattttttatgtctatctctctccaacttgcaaaactccatttattttatcaaataa 43309212  T
Q  102 agaggatcttca 113  Q
    ||||||||||||    
T  43309213 agaggatcttca 43309224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 36290606 - 36290682
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaa 77  Q
    |||||| ||||||||||||| ||||| || ||||||||||||  |||||||||||||||| ||||||||| ||||||    
T  36290606 taattaatgatggtgggatccacttagtgataggacccaccacttattttttgtgtctatctctctccaaattgcaa 36290682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 8441042 - 8440943
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| |||||||||||   ||||| ||||| | | |||||||||||||| |||||||| |  |||||||||||||| |||||||| ||||||||||||    
T  8441042 taattaatgatggtgggacacacttagtggtatgtcgcaccatctatttttggtgtctatctacctccaacttgcaaaactccatttattttgccaaatg 8440943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 109
Target Start/End: Original strand, 18653386 - 18653472
Alignment:
Q  22 acttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatggagaggatc 109  Q
    |||||||||||| || ||| ||||||||||||||||||| ||||| ||| ||||||| |||||||| ||||| ||| | |||||||||    
T  18653386 acttaatggtagaactcactatctattttttgtgtctatctctcttcaaattgcaaa-ctccatttattttgacaatttgagaggatc 18653472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 43222130 - 43222189
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctat 60  Q
    |||||| ||||||||||||| | |||||| || |||||||||||||||||||||||||||    
T  43222130 taattaatgatggtgggatccatttaatgataagacccaccatctattttttgtgtctat 43222189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 92
Target Start/End: Complemental strand, 3057204 - 3057135
Alignment:
Q  22 acttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttctttt 92  Q
    |||||||||||||| |||||||||||||||||||| ||| ||| ||||| |||||||| ||||||| ||||    
T  3057204 acttaatggtaggatccaccatctattttttgtgtttatctctatccaaattgcaaat-tccatttatttt 3057135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 4592804 - 4592858
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtg 55  Q
    |||||| ||||||||||| | ||||| ||||| ||||||||||||||||||||||    
T  4592804 taattaatgatggtgggacccacttagtggtaagacccaccatctattttttgtg 4592858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 76
Target Start/End: Complemental strand, 27428931 - 27428877
Alignment:
Q  22 acttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgca 76  Q
    ||||||||||||||  ||||||||||||||||||||||| ||| ||||| |||||    
T  27428931 acttaatggtaggattcaccatctattttttgtgtctatctctttccaaattgca 27428877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 31546490 - 31546599
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| | ||| ||||||| ||||||| ||||| ||||||||||||||| | ||||||  ||||| ||| ||||| | |||||||| || |||||||||    
T  31546490 taattaattatgatgggatccacttaatagtagggcccaccatctattttatatgtctacctctcttcaaattgcata-ctccatttattatgccaaatg 31546588  T
Q  101 gagaggatctt 111  Q
    | || ||||||    
T  31546589 gggatgatctt 31546599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 1475700 - 1475640
Alignment:
Q  27 atggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccattt 87  Q
    ||||| |||||||| | ||||||||||| |||||||||||| |||||||||| | ||||||    
T  1475700 atggtgggacccactagctattttttgtatctatttctctcaaacttgcaaaacaccattt 1475640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 111
Target Start/End: Original strand, 10242889 - 10242965
Alignment:
Q  34 gacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatggagaggatctt 111  Q
    |||||||||||||||||| |||| |||||||||||||  |||||| | |||  | |||||| ||||||||||| ||||    
T  10242889 gacccaccatctatttttcgtgtttatttctctccaaagtgcaaa-caccacctattttgctaaatggagaggttctt 10242965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 41660110 - 41660186
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaa 77  Q
    |||||| ||||||||||| | || || || |  |||||||||  |||||||||||||||| ||||||||| ||||||    
T  41660110 taattaatgatggtgggacccacctagtgatgagacccaccacttattttttgtgtctatctctctccaaattgcaa 41660186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 81; Significance: 4e-38; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 4804452 - 4804564
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| ||||||||||| | ||||| ||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||| ||||||||||||    
T  4804452 taattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctatctctctccaacttgtaaaactccatttattttgccaaatg 4804551  T
Q  101 gagaggatcttca 113  Q
    |||||||||||||    
T  4804552 gagaggatcttca 4804564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 21159440 - 21159323
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| ||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||  ||||||    
T  21159440 taattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaaacttcatttattttaacaaatg 21159341  T
Q  101 gagaggatcttcatccca 118  Q
    ||||||||||||| ||||    
T  21159340 gagaggatcttcacccca 21159323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 13089820 - 13089708
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| ||||||||||  | ||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||| | |||||| ||||||||||||    
T  13089820 taattaatgatggtggggcccacttagtggtaggacccaccatctatattttgtgtctatctctctccaacttgcaaaacaccatttattttgccaaatg 13089721  T
Q  101 gagaggatcttca 113  Q
    |||||||||||||    
T  13089720 gagaggatcttca 13089708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 27826542 - 27826657
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| ||||||||||| | ||||| ||||||||||||||||||||||||||||||||| |||||| | ||||||||||| || || |||| |||||||    
T  27826542 taattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctatctctctcaaccttgcaaatcttcagttattttaccaaatg 27826641  T
Q  101 gagaggatcttcatcc 116  Q
    ||||||||||||||||    
T  27826642 gagaggatcttcatcc 27826657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 12412641 - 12412751
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| ||||||||| | | ||||| |||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||| ||||||||||||    
T  12412641 taattaatgatggtggaacccacttagtggtaggacccaccatctatttcttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatg 12412740  T
Q  101 gagaggatctt 111  Q
    |||| ||||||    
T  12412741 gagaagatctt 12412751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 17944166 - 17944278
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| ||||||||||| | | ||| |||||||||| |||||||||||||||||||||| |||||||||||| |||| |||||||| ||||||||||||    
T  17944166 taattaatgatggtgggacccatttagtggtaggacctaccatctattttttgtgtctatctctctccaacttacaaaactccatttattttgccaaatg 17944265  T
Q  101 gagaggatcttca 113  Q
     ||||||||||||    
T  17944266 aagaggatcttca 17944278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 1249217 - 1249107
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| ||||||||||| | ||||| |||||||||||||||||||||||||||  || | |||||||||||| |||| |||||||| ||||||||||||    
T  1249217 taattaatgatggtgggacccacttagtggtaggacccaccatctattttttgt--ctgtctctctccaacttacaaaactccatttattttgccaaatg 1249120  T
Q  101 gagaggatcttca 113  Q
    |||||||||||||    
T  1249119 gagaggatcttca 1249107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 7162088 - 7162200
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| ||||||||||| | ||||| | |||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||| ||||  ||||||    
T  7162088 taattaatgatggtgggacccacttagtagtaggacccaccatctatttcttgtgtctatctctctccaacttgcaaaactccatttattttatcaaatg 7162187  T
Q  101 gagaggatcttca 113  Q
    |||| ||||||||    
T  7162188 gagatgatcttca 7162200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 114
Target Start/End: Complemental strand, 227628 - 227521
Alignment:
Q  8 tgatggtgggatctacttaatggtaggacccaccatctatt-ttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatggagagg 106  Q
    ||||| ||||||| ||||| ||||||||||||||||||||| |||||||||||| |||||||||  |||||| |||||||| ||||  ||||||||||||    
T  227628 tgatgatgggatccacttagtggtaggacccaccatctattcttttgtgtctatctctctccaaaatgcaaaactccatttattttagcaaatggagagg 227529  T
Q  107 atcttcat 114  Q
    ||||||||    
T  227528 atcttcat 227521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 32737895 - 32737973
Alignment:
Q  35 acccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatggagaggatcttca 113  Q
    |||||||||||||||||||||||||| |||||||||| |||||| ||| |||| |||||||||||||||||||||||||    
T  32737895 acccaccatctattttttgtgtctatctctctccaacctgcaaaactctatttattttgccaaatggagaggatcttca 32737973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 111
Target Start/End: Complemental strand, 1516251 - 1516168
Alignment:
Q  27 atggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatggagaggatctt 111  Q
    ||||| ||| |||||||||||||||||| || || ||||||||| ||||||| |||||||| |||||||||||||| ||||||||    
T  1516251 atggtgggatccaccatctattttttgtatccatctctctccaaattgcaaa-ctccatttattttgccaaatggataggatctt 1516168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 111
Target Start/End: Complemental strand, 1518340 - 1518257
Alignment:
Q  27 atggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatggagaggatctt 111  Q
    ||||| ||| |||||||||||||||||| || || ||||||||| ||||||| |||||||| |||||||||||||| ||||||||    
T  1518340 atggtgggatccaccatctattttttgtatccatctctctccaaattgcaaa-ctccatttattttgccaaatggataggatctt 1518257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 24484883 - 24484959
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaa 77  Q
    |||||| ||||||||||| | ||||| || ||||||||||||  |||||||||||||||| ||||||||| ||||||    
T  24484883 taattaatgatggtgggacccacttagtgataggacccaccacttattttttgtgtctatctctctccaaattgcaa 24484959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 13888594 - 13888483
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctatt-ttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaat 99  Q
    |||||| ||||| ||||| | | |||||||||||| |||||||||||| |||||||| ||| ||||||||| ||||||| ||| |||| ||||  || ||    
T  13888594 taattaatgatgatgggacccagttaatggtaggaaccaccatctattattttgtgtatatctctctccaaattgcaaaactctatttattttagcatat 13888495  T
Q  100 ggagaggatctt 111  Q
     |||||||||||    
T  13888494 tgagaggatctt 13888483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 2800675 - 2800574
Alignment:
Q  8 tgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatggagagga 107  Q
    ||||||||||| | ||||||||||| || |||| ||||||||| ||||||||| ||||||||| |||   || ||||||  ||||  |||||||||||||    
T  2800675 tgatggtgggacccacttaatggtatgatccactatctattttatgtgtctatctctctccaaattgtgtatttccattaattttatcaaatggagagga 2800576  T
Q  108 tc 109  Q
    ||    
T  2800575 tc 2800574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 29698167 - 29698220
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgt 54  Q
    |||||| ||||||||||| | |||||||||||||| ||||||||||||||||||    
T  29698167 taattaatgatggtgggacccacttaatggtaggatccaccatctattttttgt 29698220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 7215923 - 7215816
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| |||| |||||| | | ||| ||||||||||||| ||||||||| ||||||||| ||||||||| |||   |  ||||||| ||||  ||||||    
T  7215923 taattaatgatagtgggacccaattagtggtaggacccactatctattttatgtgtctatctctctccaaattgtgcacttccatttattttatcaaatg 7215824  T
Q  101 gagaggat 108  Q
    ||||||||    
T  7215823 gagaggat 7215816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 111
Target Start/End: Complemental strand, 1515576 - 1515503
Alignment:
Q  37 ccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatggagaggatctt 111  Q
    |||||||||||||||| | || || ||||||||| ||||||| |||||||| ||||||||||| || ||||||||    
T  1515576 ccaccatctattttttttatccatctctctccaaattgcaaa-ctccatttattttgccaaattgataggatctt 1515503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 2142364 - 2142288
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaa 77  Q
    |||||| ||||||||| | | || ||||| | ||||||||||  |||||||||||||||| ||||||||| ||||||    
T  2142364 taattaatgatggtggaacccacctaatgatgggacccaccacttattttttgtgtctatctctctccaaattgcaa 2142288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 77
Target Start/End: Complemental strand, 7098260 - 7098190
Alignment:
Q  8 tgatggtgggatctacttaatggtaggacccaccatcta-ttttttgtgtctatttctctccaacttgcaa 77  Q
    ||||||||||||| ||||| || ||||||||||||  || |||||| ||||||| ||||||||| ||||||    
T  7098260 tgatggtgggatccacttagtgataggacccaccacttatttttttttgtctatctctctccaaattgcaa 7098190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 77
Target Start/End: Original strand, 7545648 - 7545718
Alignment:
Q  8 tgatggtgggatctacttaatggtaggacccaccatctatttttt-gtgtctatttctctccaacttgcaa 77  Q
    |||| |||||||| ||||| || ||||||||||||  |||||||| |||||||| ||||||||| ||||||    
T  7545648 tgatagtgggatccacttagtgataggacccaccacttattttttggtgtctatctctctccaaattgcaa 7545718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 104
Target Start/End: Complemental strand, 28696680 - 28696624
Alignment:
Q  47 ttttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatggaga 104  Q
    |||||| ||||||| ||||||||| ||||||| ||| |||| ||||||||||||||||    
T  28696680 ttttttttgtctatctctctccaaattgcaaa-ctcaatttattttgccaaatggaga 28696624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 60
Target Start/End: Complemental strand, 20228552 - 20228516
Alignment:
Q  24 ttaatggtaggacccaccatctattttttgtgtctat 60  Q
    |||||| | ||||||||||||||||||||||||||||    
T  20228552 ttaatgatgggacccaccatctattttttgtgtctat 20228516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 60
Target Start/End: Complemental strand, 22122536 - 22122500
Alignment:
Q  24 ttaatggtaggacccaccatctattttttgtgtctat 60  Q
    |||||| | ||||||||||||||||||||||||||||    
T  22122536 ttaatgatgggacccaccatctattttttgtgtctat 22122500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 104
Target Start/End: Original strand, 30460875 - 30460930
Alignment:
Q  48 tttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatggaga 104  Q
    ||||||||||||| | ||||||| ||||||| |||||||| ||||| ||||||||||    
T  30460875 tttttgtgtctatctttctccaaattgcaaa-ctccatttattttgtcaaatggaga 30460930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 4e-38; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 19901989 - 19901877
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| ||||||||||| | ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||| |||||||    
T  19901989 taattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttaccaaatg 19901890  T
Q  101 gagaggatcttca 113  Q
    |||||||||||||    
T  19901889 gagaggatcttca 19901877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 56558283 - 56558395
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| ||||||||||| | ||||| || |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||    
T  56558283 taattaatgatggtgggacccacttagtgataggacccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatg 56558382  T
Q  101 gagaggatcttca 113  Q
    |||||||||||||    
T  56558383 gagaggatcttca 56558395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 34778425 - 34778537
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| ||||||||||| | ||||| |||||||| |||||||||||||||||||||||| ||||| ||||||||||| |||||||| ||||||||||||    
T  34778425 taattaatgatggtgggacccacttagtggtaggatccaccatctattttttgtgtctatctctcttcaacttgcaaaactccatttattttgccaaatg 34778524  T
Q  101 gagaggatcttca 113  Q
    |||||||||||||    
T  34778525 gagaggatcttca 34778537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 3952241 - 3952129
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| |||||||| || | ||||| ||||||||||||||||||||||||| ||||||| |||||||||||||| || |||||||| ||||||||||||    
T  3952241 taattaatgatggtgagacccacttagtggtaggacccaccatctattttttttgtctatctctctccaacttgccaaactccatttattttgccaaatg 3952142  T
Q  101 gagaggatcttca 113  Q
    |||||||||||||    
T  3952141 gagaggatcttca 3952129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 24073620 - 24073732
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| |||||| |||| | ||||| |||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||||| ||||||||||||    
T  24073620 taattaatgatggcgggacccacttagtggtaggacccaccatctatttgttgtgtctatctctctccaacttacaaatctccatttattttgccaaatg 24073719  T
Q  101 gagaggatcttca 113  Q
    | |||||||||||    
T  24073720 gggaggatcttca 24073732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 8 - 113
Target Start/End: Original strand, 23610653 - 23610758
Alignment:
Q  8 tgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatggagagga 107  Q
    ||||||||||| | ||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||  |||||||||||||    
T  23610653 tgatggtgggacccacttagtggtatgacccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttatcaaatggagagga 23610752  T
Q  108 tcttca 113  Q
    ||||||    
T  23610753 tcttca 23610758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 5416536 - 5416425
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| ||||||||||| | ||||| ||||||||||||| |||||||||| |||||||| ||||||||||||||||| |||||||| ||||| ||||||    
T  5416536 taattaatgatggtgggacccacttagtggtaggacccacaatctattttt-gtgtctatctctctccaacttgcaaaactccatttattttgtcaaatg 5416438  T
Q  101 gagaggatcttca 113  Q
    |||||||||||||    
T  5416437 gagaggatcttca 5416425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 5763233 - 5763121
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| ||||||||||| | ||||| ||||||||||||||||||||||||||| ||||| ||||||||||||| ||| |||||| | |||||||||||     
T  5763233 taattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtttctatctctctccaacttgtaaaactccatatattttgccaaatt 5763134  T
Q  101 gagaggatcttca 113  Q
    |||||||||||||    
T  5763133 gagaggatcttca 5763121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 33247201 - 33247089
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| ||||||||| | | | ||| |||||| ||||||||||||||| |||||||||| ||||||||||||||||| |||||||| ||||||||||||    
T  33247201 taattaatgatggtggaacccatttagtggtagaacccaccatctatttcttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatg 33247102  T
Q  101 gagaggatcttca 113  Q
    |||||||||||||    
T  33247101 gagaggatcttca 33247089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 27 - 113
Target Start/End: Original strand, 12153184 - 12153270
Alignment:
Q  27 atggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatggagaggatcttca 113  Q
    ||||| |||||||||||||| ||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  12153184 atggtgggacccaccatctaatttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttca 12153270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 12312547 - 12312434
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgt-gtctatttctctccaacttgcaaatctccatttcttttgccaaat 99  Q
    |||||| ||||| ||||| | ||||| |||||||| |||||||||||||||| | |||||| ||||||||||||||||| |||||||| |||||||||||    
T  12312547 taattaatgatgatgggacccacttagtggtaggatccaccatctatttttttttgtctatctctctccaacttgcaaaactccatttattttgccaaat 12312448  T
Q  100 ggagaggatcttca 113  Q
    ||||||||||||||    
T  12312447 ggagaggatcttca 12312434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 18207111 - 18206999
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| ||||| ||||| | ||||| ||||||||||||||||||||||||| ||||||| |||||| |||||||||| || ||||| ||||| ||||||    
T  18207111 taattaatgatgatgggacccacttagtggtaggacccaccatctattttttttgtctatctctctctaacttgcaaaactacatttattttgtcaaatg 18207012  T
Q  101 gagaggatcttca 113  Q
    |||||||||||||    
T  18207011 gagaggatcttca 18206999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 33262623 - 33262511
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| ||||||||||| ||| ||| |||||||| |||||||||||||||||||||||| |||||| |||||||||| | | |||| |||||||||||     
T  33262623 taattaatgatggtgggacctatttagtggtaggatccaccatctattttttgtgtctatctctctctaacttgcaaaacacaatttattttgccaaata 33262524  T
Q  101 gagaggatcttca 113  Q
    |||||||||||||    
T  33262523 gagaggatcttca 33262511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 30567905 - 30568008
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| ||||| ||| | | ||||| ||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||| ||||||||||||    
T  30567905 taattaatgatgatggaacccacttagtggtaggacccaccatctattttttgtgtctatctctcttcaacttgcaaaactccatttattttgccaaatg 30568004  T
Q  101 gaga 104  Q
    ||||    
T  30568005 gaga 30568008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 38079791 - 38079679
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| ||||||||| ||| ||||| | |||||||||||||||||||| |||||||||| |||||| |||| ||||| |||||||| |||||  |||||    
T  38079791 taattaatgatggtggaatccacttagtagtaggacccaccatctatttcttgtgtctatctctctcaaactagcaaaactccatttattttgttaaatg 38079692  T
Q  101 gagaggatcttca 113  Q
    |||||||||||||    
T  38079691 gagaggatcttca 38079679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 24 - 113
Target Start/End: Original strand, 52018790 - 52018879
Alignment:
Q  24 ttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatggagaggatcttca 113  Q
    |||||||| ||| |||| || |||||||||| ||||| ||||||||||||||||| |||||||| |||||| ||||||||||||||||||    
T  52018790 ttaatggtgggatccactatttattttttgtatctatctctctccaacttgcaaaactccatttattttgctaaatggagaggatcttca 52018879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 9 - 111
Target Start/End: Complemental strand, 47922430 - 47922327
Alignment:
Q  9 gatggtgggatctacttaatggtaggacccaccatctatt-ttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatggagagga 107  Q
    |||| ||||| | ||||| ||||||||||||||||||||| |||||||||||| ||||||||| ||||||| ||| |||| ||||  |||||||||||||    
T  47922430 gatgatgggacccacttagtggtaggacccaccatctattcttttgtgtctatatctctccaaattgcaaaactcaatttattttagcaaatggagagga 47922331  T
Q  108 tctt 111  Q
    ||||    
T  47922330 tctt 47922327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 23474115 - 23474224
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| ||||||||||||  ||| ||| ||||||||||||||||||||| ||||||||| |||| |||| ||||| | |||||||| || ||| |||||    
T  23474115 taattaatgatggtgggattcactcaatagtaggacccaccatctattttatgtgtctatctctccccaaattgcata-ctccatttattatgctaaatg 23474213  T
Q  101 gagaggatctt 111  Q
    |||||||||||    
T  23474214 gagaggatctt 23474224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 48 - 113
Target Start/End: Original strand, 33524313 - 33524378
Alignment:
Q  48 tttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatggagaggatcttca 113  Q
    ||||||| ||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  33524313 tttttgtatctatctctctccaacttccaaatctccatttattttgccaaatggagaggatcttca 33524378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 31 - 113
Target Start/End: Original strand, 39862551 - 39862633
Alignment:
Q  31 taggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatggagaggatcttca 113  Q
    |||||| ||||||||||||||||||||||| |||||| ||||||||||  || |||| ||||  |||||||||||||||||||    
T  39862551 taggacacaccatctattttttgtgtctatctctctcaaacttgcaaaattctatttattttatcaaatggagaggatcttca 39862633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 56269147 - 56269071
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaa 77  Q
    |||||| ||||||||||| | ||||| |||||||||||||||  |||||||||||||||| ||||||||| ||||||    
T  56269147 taattaatgatggtgggacccacttagtggtaggacccaccacttattttttgtgtctatctctctccaaattgcaa 56269071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 76
Target Start/End: Complemental strand, 56453884 - 56453816
Alignment:
Q  8 tgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgca 76  Q
    ||||||||||| | |||||||| |||||||||||| ||||||||||||||||| ||||||||| |||||    
T  56453884 tgatggtgggacccacttaatgataggacccaccacctattttttgtgtctatctctctccaaattgca 56453816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 107
Target Start/End: Original strand, 34927509 - 34927596
Alignment:
Q  21 tacttaatggtaggacccaccatctatt-ttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatggagagga 107  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||  || ||||||| | |||||| ||||   ||||||||||||    
T  34927509 tacttaatggtaggacccaccatctattcttttgtgtctatctctctttaaattgcaaaaccccatttattttagtaaatggagagga 34927596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 5524451 - 5524527
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaa 77  Q
    |||||| ||||||||||| | ||||| || ||||||||||||  |||||||| ||||||| ||||||||| ||||||    
T  5524451 taattaatgatggtgggacccacttactgataggacccaccacttattttttatgtctatctctctccaaattgcaa 5524527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 1015925 - 1015849
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaa 77  Q
    |||||| ||||||||||| | || ||||| | ||||||||||  |||||||||||||||| |||||| || ||||||    
T  1015925 taattaatgatggtgggacccacctaatgatgggacccaccacttattttttgtgtctatctctctctaaattgcaa 1015849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 36688259 - 36688183
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaa 77  Q
    |||||| ||||||||||| | ||||| || |||||| || ||  |||||||||||||||| ||||||||| ||||||    
T  36688259 taattaatgatggtgggacccacttagtgataggactcaacacttattttttgtgtctatctctctccaaattgcaa 36688183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 77
Target Start/End: Original strand, 5361456 - 5361506
Alignment:
Q  27 atggtaggacccaccatctattttttgtgtctatttctctccaacttgcaa 77  Q
    ||||| ||||||||||  |||||||||||||||| ||||||||| ||||||    
T  5361456 atggtgggacccaccacttattttttgtgtctatctctctccaaattgcaa 5361506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 77
Target Start/End: Original strand, 17493013 - 17493083
Alignment:
Q  8 tgatggtgggatctacttaatggtaggacccaccatctatttt-ttgtgtctatttctctccaacttgcaa 77  Q
    ||||||||| ||| ||||| || ||||||||||||  |||||| |||||||||| ||||||||| ||||||    
T  17493013 tgatggtggaatccacttagtgataggacccaccacttatttttttgtgtctatctctctccaaattgcaa 17493083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 77
Target Start/End: Original strand, 32146513 - 32146583
Alignment:
Q  8 tgatggtgggatctacttaatggtaggacccaccatcta-ttttttgtgtctatttctctccaacttgcaa 77  Q
    ||||||||||||| ||||| || ||||||||||||  || |||||||| ||||| ||||||||| ||||||    
T  32146513 tgatggtgggatccacttagtgataggacccaccacttatttttttgtatctatctctctccaaattgcaa 32146583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 77
Target Start/End: Original strand, 46238977 - 46239047
Alignment:
Q  8 tgatggtgggatctacttaatggtaggacccaccatcta-ttttttgtgtctatttctctccaacttgcaa 77  Q
    ||||||||||||| ||||| || ||||||||||||  || |||||||||||||| ||||| ||| ||||||    
T  46238977 tgatggtgggatccacttagtgataggacccaccacttatttttttgtgtctatctctcttcaaattgcaa 46239047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 77
Target Start/End: Original strand, 53526099 - 53526169
Alignment:
Q  8 tgatggtgggatctacttaatggtaggacccaccatcta-ttttttgtgtctatttctctccaacttgcaa 77  Q
    ||||||||||||| ||||| || ||||||||||||  || |||||| ||||||| ||||||||| ||||||    
T  53526099 tgatggtgggatccacttagtgataggacccaccacttatttttttttgtctatctctctccaaattgcaa 53526169  T

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Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 77
Target Start/End: Complemental strand, 55160435 - 55160365
Alignment:
Q  8 tgatggtgggatctacttaatggtaggacccaccatcta-ttttttgtgtctatttctctccaacttgcaa 77  Q
    ||||||||||||| ||||| || ||||||||||||  || |||||||||||||| ||| ||||| ||||||    
T  55160435 tgatggtgggatccacttagtgataggacccaccacttatttttttgtgtctatctctttccaaattgcaa 55160365  T

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Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 70
Target Start/End: Original strand, 25219006 - 25219070
Alignment:
Q  8 tgatggtgggatctacttaatggtaggacccacca--tctattttttgtgtctatttctctccaa 70  Q
    ||||||||||||| ||||| || ||||||||||||  | | |||||||||||||| |||||||||    
T  25219006 tgatggtgggatccacttagtgataggacccaccacttattttttttgtgtctatctctctccaa 25219070  T

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Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 25442234 - 25442190
Alignment:
Q  12 ggtgggatctacttaatggtaggacccaccatctattttttgtgt 56  Q
    |||| |||| ||||| ||||||||||||| |||||||||||||||    
T  25442234 ggtgagatccacttagtggtaggacccacaatctattttttgtgt 25442190  T

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Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 26428999 - 26429059
Alignment:
Q  28 tggtaggacccaccatctatt-ttttgtgtctatttctctccaacttgcaaatctccattt 87  Q
    ||||||||| ||||||||||| |||||||||||| | ||||||| ||||||| || |||||    
T  26428999 tggtaggactcaccatctattcttttgtgtctatctttctccaaattgcaaaacttcattt 26429059  T

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Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 37002322 - 37002246
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaa 77  Q
    |||||| ||||||||||| | ||||| |  ||||| ||||||  |||||||||||||||| ||| ||||| ||||||    
T  37002322 taattaatgatggtgggacccacttagtaataggatccaccacttattttttgtgtctatctctttccaaattgcaa 37002246  T

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Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 42010121 - 42010197
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaa 77  Q
    |||||| ||||||||||| | | ||| || |||||||| |||  |||||||||| ||||| ||||||||| ||||||    
T  42010121 taattaatgatggtgggacccatttagtgataggacccgccacttattttttgtatctatctctctccaaattgcaa 42010197  T

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Target: scaffold0012 (Bit Score: 77; Significance: 9e-36; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 208067 - 208179
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| ||||| ||||| | ||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||| ||||||||||||    
T  208067 taattaatgatgatgggacccacttagtggtaggacccaccatctattttttgtgtttatctctctccaacttgcaaaactccatttattttgccaaatg 208166  T
Q  101 gagaggatcttca 113  Q
    |||||||||||||    
T  208167 gagaggatcttca 208179  T

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Target: scaffold0008 (Bit Score: 77; Significance: 9e-36; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 9272 - 9160
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| ||||||||| ||| ||||| |||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  9272 taattaatgatggtggaatccacttagtggttggacccaccatctattttctgtgtctatctctctccaacttgcaaatctccatttattttgccaaatg 9173  T
Q  101 gagaggatcttca 113  Q
    |||| ||||||||    
T  9172 gagatgatcttca 9160  T

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Target: scaffold0035 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 16468 - 16351
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| ||||| ||||| | ||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||| ||||||| || |    
T  16468 taattaatgatgatgggacccacttagtggtaggacccaccatttattttttgtgtctatctctctccaacttgcaaaactccatttattttgcctaacg 16369  T
Q  101 gagaggatcttcatccca 118  Q
    ||||||||||||| ||||    
T  16368 gagaggatcttcacccca 16351  T

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Target: scaffold0250 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 7151 - 7267
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctcc----atttcttttgcca 96  Q
    |||||| ||||||||| | | ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||    |||| ||||||||    
T  7151 taattaatgatggtggaacccacttaatagtaggacccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttatttattttgcca 7250  T
Q  97 aatggagaggatcttca 113  Q
    |||||||||||||||||    
T  7251 aatggagaggatcttca 7267  T

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Target: scaffold0006 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 33 - 112
Target Start/End: Complemental strand, 73896 - 73817
Alignment:
Q  33 ggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatggagaggatcttc 112  Q
    ||||||||||||||| ||||| |||||| ||||||||||||||||| | |||||| ||||||||||| ||||||||||||    
T  73896 ggacccaccatctatattttgcgtctatctctctccaacttgcaaaacaccatttattttgccaaatagagaggatcttc 73817  T

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Target: scaffold0456 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 113
Target Start/End: Original strand, 13709 - 13796
Alignment:
Q  27 atggtaggacccaccatctattttttgt-gtctatttctctccaacttgcaaatctccatttcttttgccaaatggagaggatcttca 113  Q
    ||||| |||||||||||||||||||| | |||||| ||||||||||| ||||| ||| |||| |||||||||||||||| ||||||||    
T  13709 atggtgggacccaccatctatttttttttgtctatctctctccaactagcaaaactctatttattttgccaaatggagaagatcttca 13796  T

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Target: scaffold0009 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 30 - 111
Target Start/End: Complemental strand, 6477 - 6396
Alignment:
Q  30 gtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatggagaggatctt 111  Q
    ||||||||||||||||||||||||||||| | ||| |||||||||||||   |||||| |||| | |||| |||||||||||    
T  6477 gtaggacccaccatctattttttgtgtctgtctctttccaacttgcaaaatcccatttattttacgaaatagagaggatctt 6396  T

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Target: scaffold0126 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 111
Target Start/End: Complemental strand, 22492 - 22404
Alignment:
Q  22 acttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatggagaggatctt 111  Q
    ||||| |||||||| |||| ||||||||||||||||||| ||| |  || ||||||| |||||||| |||||| ||||| ||||||||||    
T  22492 acttagtggtaggatccactatctattttttgtgtctatctctttgtaaattgcaaa-ctccatttattttgctaaatgcagaggatctt 22404  T

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Target: scaffold0664 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 77
Target Start/End: Complemental strand, 4765 - 4695
Alignment:
Q  8 tgatggtgggatctacttaatggtaggacccaccatcta-ttttttgtgtctatttctctccaacttgcaa 77  Q
    ||||||||||||| ||||| || ||||||||||||  || |||||||||||||| ||||||||| ||||||    
T  4765 tgatggtgggatccacttagtgataggacccaccacttatttttttgtgtctatctctctccaaattgcaa 4695  T

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Target: scaffold0062 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 58684 - 58786
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaatctccatttcttttgccaaatg 100  Q
    |||||| ||||| ||| | | |||||||||||||| |||| ||||||||| | ||| ||| ||||||||| ||||| || ||||||| |||||| ||||     
T  58684 taattaatgatgatggaacccacttaatggtaggatccactatctattttatatgtttatctctctccaaattgcatat-tccatttattttgctaaatc 58782  T
Q  101 gaga 104  Q
    ||||    
T  58783 gaga 58786  T

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Target: scaffold0171 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 17377 - 17311
Alignment:
Q  1 taattactgatggtgggatctacttaatggtaggacccaccatctattttttgtgtctatttctctc 67  Q
    |||||| ||||||||||| | ||||| || ||||||||| ||  |||||||||||||||| ||||||    
T  17377 taattaatgatggtgggacccacttagtgataggacccagcacttattttttgtgtctatctctctc 17311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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