View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19127_low_38 (Length: 250)
Name: NF19127_low_38
Description: NF19127
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19127_low_38 |
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Alignment Details
Target: chr4 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 15 - 231
Target Start/End: Complemental strand, 6886857 - 6886641
Alignment:
| Q |
15 |
aatcatcggtggttggatatacttattgaatagaattgtctcttatagaattagacctagtttttaaaaccctatattactcacatgatgacaagtgatg |
114 |
Q |
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| T |
6886857 |
aatcatcggtggttggatatacttattgaatagaattgtctcttatagaattagacctagttttaaaaaccctatattactcacatgatgacaagtgatg |
6886758 |
T |
|
| Q |
115 |
aattataaagaatgttgaaacaatgaaaagtgagcactccaactcccctatgaactctaatatttaaccatataggttgtcaagttcaatgcataaattg |
214 |
Q |
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| T |
6886757 |
aattataaagaatgttgaaacaatgaaaagtgagcactccaactcccctatgaactctaatatttaaccatataggttgtcaagttcaatgcataaattg |
6886658 |
T |
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| Q |
215 |
ttgcagaacacaaggcg |
231 |
Q |
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||||||||||||||||| |
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| T |
6886657 |
ttgcagaacacaaggcg |
6886641 |
T |
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