View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19128_high_60 (Length: 231)
Name: NF19128_high_60
Description: NF19128
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19128_high_60 |
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Alignment Details
Target: chr2 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 29098362 - 29098306
Alignment:
| Q |
19 |
aatatagcactaacaaaaatatagactcaagttagtaaagcaaatctatttttgttaa |
76 |
Q |
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| T |
29098362 |
aatatagcactaacaaaa-tatagactcaagttagtaaagcaaatcaatttttgttaa |
29098306 |
T |
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