View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19128_low_16 (Length: 510)
Name: NF19128_low_16
Description: NF19128
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19128_low_16 |
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Alignment Details
Target: chr7 (Bit Score: 430; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 430; E-Value: 0
Query Start/End: Original strand, 13 - 491
Target Start/End: Complemental strand, 46942681 - 46942201
Alignment:
| Q |
13 |
aatatcaagtatagcaatgagactacattcttattgagattataaacaactttcatcattgattgaaatgaagaggtttcgaacattcttcatgaatcat |
112 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
46942681 |
aatatcaagtatagcaatgagactacattcttattgagattataaacaactttcatcattgattgaaatgaagaggtttcaaacattcttcatgaatcat |
46942582 |
T |
|
| Q |
113 |
gatccatgtaannnnnnnn--atggaaggactttattccttttcttcgtacttgttaaaatgatctcctccgccttatcatttatgctaaccattttctt |
210 |
Q |
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| T |
46942581 |
gatccatgtaattttttttttatggaaggactttattccttttcttcgtacttgttaaaatgatctcctccgccatatcatttatgctaaccattttctt |
46942482 |
T |
|
| Q |
211 |
cgaagcttgatggcacaattcttcatcaacaatgttcctgcacagattattctcttcttcaacatgttctgtttgaggagaaagacgattatcacggaag |
310 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
46942481 |
cgaagcttgatggcacaattcttcatcaacaatgttcctgcacagattattctcttcttcaacatgttctgtttgaggagaaagacgattatcaccgaag |
46942382 |
T |
|
| Q |
311 |
aaatattgagattttcgaagctcattgctatttagacctatacaaggtgtcacatgccgaaccattttgtctgaaattggcacaccaagtgagcttgaac |
410 |
Q |
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||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46942381 |
aaatatttagattttcgaagctcattgctatttagacctatacaaggtgtcacatgccgaaccattttgtctgaaattggcacaccaagtgagcttgaac |
46942282 |
T |
|
| Q |
411 |
cgtaatttgaagatctccctaaagtcactgtcttcgatgcttgtgcagacagtattttcatgatgaaatcatagagcttat |
491 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46942281 |
cgtaatttgaagatctccctaaagtcactgtcttcgatgcttgtgcagacagtattttcatgatgaaatcatagagcttat |
46942201 |
T |
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