View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19128_low_45 (Length: 322)
Name: NF19128_low_45
Description: NF19128
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19128_low_45 |
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Alignment Details
Target: chr7 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 13 - 302
Target Start/End: Original strand, 2432059 - 2432347
Alignment:
| Q |
13 |
aatatctggatcgaaaacttgatgaacaaggtatgcttcggcacataaaacttggtttgtgaccaagcttcaattatagcaaagtactttaagggaaata |
112 |
Q |
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| T |
2432059 |
aatatctggatcgaaaacttgatgaacaagg-atgcttcggcacataaaacttggtttgtgaccaagcttcaattatagcaaagtactttgagggaaata |
2432157 |
T |
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| Q |
113 |
acctgctttgaaaagccttgataccaatgaatcaatctgtgtttggaatttccaccgttgactataactaagcttcaccaaattaaaggtcgtgaggtct |
212 |
Q |
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||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |
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| T |
2432158 |
acctgctttgaaaagccctgatacaaatgaatcaatctgtgtttggaatttccaccgttgaatataactaagcctcaccaaattaaaggtcgtgaggtct |
2432257 |
T |
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| Q |
213 |
ttaaaaccaatgccaccataattttcatgagtattaaggttgtatcaagatagctaatacattcctttattcgtagacgctctacgacac |
302 |
Q |
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||||||||||| ||||||||||||||||||| |||||| || |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2432258 |
ttaaaaccaataccaccataattttcatgagcattaagcttctatcaagatagctaatacattcctttattcgtagacgctctacgacac |
2432347 |
T |
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