View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19128_low_52 (Length: 259)
Name: NF19128_low_52
Description: NF19128
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19128_low_52 |
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Alignment Details
Target: chr2 (Bit Score: 141; Significance: 5e-74; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 41 - 221
Target Start/End: Original strand, 21972058 - 21972238
Alignment:
| Q |
41 |
tcatcttcaaataaccttcattattctattcttctcattttattacattattatatatagttaagcctctatgggagggtgctcagtgttggaaagagac |
140 |
Q |
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| T |
21972058 |
tcatcttcaaataacattcattattctattcttcttattttattacattattatatatagttaagcctctatgggagggtgctcagtgttgggaagagac |
21972157 |
T |
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| Q |
141 |
cattaaccttttcacaattgctcaacaagctactcaacatcatatcaaaccttttctgcctcaaagaaggtatttattttt |
221 |
Q |
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| T |
21972158 |
cataaaccttttcacaattgctcaacaagctactcaacatcacatcaaaccttttcttcctcataaaaggttttttttttt |
21972238 |
T |
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