View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19128_low_61 (Length: 237)
Name: NF19128_low_61
Description: NF19128
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19128_low_61 |
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Alignment Details
Target: chr3 (Bit Score: 180; Significance: 2e-97; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 8 - 218
Target Start/End: Original strand, 36263264 - 36263474
Alignment:
| Q |
8 |
tacttgtgttggtatttgagacttcctcagtggtggttttggtagctgcagaagacaannnnnnnnngttcttatgctcctgacaaaagcagaataacaa |
107 |
Q |
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| T |
36263264 |
tacttgtgttggtatttgagacttcctcagtggtggttttggtagctgcagaagacaatttttttttgttcttatgctgctgacaaaagcagaataacaa |
36263363 |
T |
|
| Q |
108 |
cacaaaaaagataagaagcaggaatgcagctccaacagcaattccaacaaccacccatttcttagaagagcttgaatctttattcctagctagattttcc |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36263364 |
cacaaaaaagataagaagcaggaatgcagctccaacagcaattccaacaaccacccatttcttagaagagcttgaatctttattcctagctagattttcc |
36263463 |
T |
|
| Q |
208 |
acatgaggttt |
218 |
Q |
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||||||||||| |
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| T |
36263464 |
acatgaggttt |
36263474 |
T |
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