View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19128_low_67 (Length: 222)
Name: NF19128_low_67
Description: NF19128
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19128_low_67 |
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Alignment Details
Target: chr5 (Bit Score: 181; Significance: 6e-98; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 16 - 204
Target Start/End: Original strand, 16385386 - 16385574
Alignment:
| Q |
16 |
gagaggaaaagaatcaatgaagtaaaagcgataacaatagcaaaaacagcgattttgctaggcttcattttgtggatccatggtggtgaaagagttgatt |
115 |
Q |
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| T |
16385386 |
gagaggaaaagaatcaatgaagtaaaagcgataacaatagcaaaaacagcgattttgctaggcttcattttgtggatccacggtggtgaaagagttgatt |
16385485 |
T |
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| Q |
116 |
tggaatggaaatgataacatacaaactgttttttcgtgtctgatgaattgaaaccacagaaaccattgttgttgttgatgcaatcttta |
204 |
Q |
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| T |
16385486 |
tggaatggaaatgataacatacaaactgttttttcgtgtctgatgaattgaaaccacagaaaccattgttgttgttgatgcattcttta |
16385574 |
T |
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