View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19128_low_68 (Length: 212)
Name: NF19128_low_68
Description: NF19128
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19128_low_68 |
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Alignment Details
Target: chr1 (Bit Score: 120; Significance: 1e-61; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 42 - 185
Target Start/End: Original strand, 18787417 - 18787559
Alignment:
| Q |
42 |
aaggaagtcaacaattagagcggtagcgtaaacggaacaaactcaaaaaagaagagtgttgtgaatcttacaactagtcacaggctattataggaatctc |
141 |
Q |
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| T |
18787417 |
aaggaagtcaacaattagagcagtagcgtaaacagaacaaactcaaaa-agaagagtgttgtgaatcttacaactagtcataggctattataggaatctc |
18787515 |
T |
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| Q |
142 |
catgtgggttgatgtgggatcattgtatatattgtgaatcattt |
185 |
Q |
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| T |
18787516 |
catgtgggtagatgtgggatcattgtatatattgtgaatcattt |
18787559 |
T |
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