View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19128_low_7 (Length: 632)

Name: NF19128_low_7
Description: NF19128
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19128_low_7
NF19128_low_7
[»] chr6 (29 HSPs)
chr6 (185-617)||(7978132-7978563)
chr6 (455-617)||(8042352-8042514)
chr6 (462-617)||(8032455-8032610)
chr6 (455-617)||(7971199-7971361)
chr6 (60-246)||(10187994-10188178)
chr6 (120-245)||(5863298-5863423)
chr6 (60-249)||(32853827-32854021)
chr6 (120-254)||(27534732-27534866)
chr6 (120-251)||(30986301-30986432)
chr6 (61-246)||(3483837-3484027)
chr6 (75-251)||(2367324-2367505)
chr6 (75-194)||(12678060-12678184)
chr6 (60-246)||(12141368-12141559)
chr6 (41-203)||(13769036-13769203)
chr6 (138-189)||(29341322-29341373)
chr6 (123-198)||(32054187-32054261)
chr6 (120-246)||(10142432-10142558)
chr6 (60-190)||(27738755-27738890)
chr6 (120-213)||(9442478-9442570)
chr6 (113-246)||(31496475-31496608)
chr6 (113-246)||(31501861-31501994)
chr6 (120-201)||(32532588-32532669)
chr6 (125-188)||(256464-256527)
chr6 (120-251)||(20349112-20349243)
chr6 (120-201)||(11762493-11762574)
chr6 (123-216)||(15498375-15498468)
chr6 (164-251)||(24225796-24225883)
chr6 (147-188)||(30816333-30816374)
chr6 (120-196)||(28079660-28079736)
[»] chr5 (31 HSPs)
chr5 (6-250)||(39422280-39422524)
chr5 (120-251)||(4583167-4583298)
chr5 (60-246)||(4920809-4921000)
chr5 (120-246)||(33727916-33728042)
chr5 (126-250)||(40187568-40187692)
chr5 (60-231)||(10127064-10127233)
chr5 (120-196)||(38972970-38973046)
chr5 (120-246)||(18207066-18207192)
chr5 (129-241)||(16311213-16311325)
chr5 (120-246)||(5908603-5908729)
chr5 (120-246)||(20973411-20973537)
chr5 (120-250)||(29245862-29245992)
chr5 (125-190)||(6092500-6092565)
chr5 (124-251)||(6155830-6155957)
chr5 (120-254)||(15890254-15890388)
chr5 (120-246)||(17853208-17853333)
chr5 (120-244)||(12866468-12866592)
chr5 (120-251)||(40517854-40517985)
chr5 (120-174)||(27900388-27900442)
chr5 (78-196)||(2681217-2681340)
chr5 (122-251)||(13401914-13402043)
chr5 (120-188)||(2412699-2412767)
chr5 (124-188)||(24207736-24207800)
chr5 (120-196)||(28568986-28569062)
chr5 (148-240)||(42717551-42717643)
chr5 (120-247)||(22694816-22694942)
chr5 (125-188)||(43523801-43523864)
chr5 (120-245)||(12834490-12834615)
chr5 (60-97)||(33420400-33420437)
chr5 (124-160)||(3573255-3573291)
chr5 (127-191)||(35167299-35167363)
[»] scaffold0531 (1 HSPs)
scaffold0531 (462-617)||(2497-2652)
[»] chr8 (36 HSPs)
chr8 (12-250)||(30481330-30481574)
chr8 (120-250)||(5858562-5858692)
chr8 (120-251)||(27932461-27932593)
chr8 (120-246)||(43113540-43113666)
chr8 (61-246)||(32303045-32303235)
chr8 (124-203)||(14155584-14155663)
chr8 (120-246)||(20399640-20399766)
chr8 (120-251)||(1063555-1063692)
chr8 (121-251)||(2075743-2075873)
chr8 (55-157)||(14186298-14186405)
chr8 (56-203)||(14687378-14687530)
chr8 (120-250)||(29108732-29108862)
chr8 (61-246)||(24927933-24928123)
chr8 (120-188)||(39445548-39445616)
chr8 (120-190)||(32392356-32392426)
chr8 (120-190)||(37960932-37961002)
chr8 (120-196)||(27056519-27056595)
chr8 (120-196)||(27777162-27777238)
chr8 (123-203)||(35215587-35215666)
chr8 (120-203)||(1012667-1012749)
chr8 (127-196)||(10297513-10297582)
chr8 (120-201)||(17220760-17220841)
chr8 (122-246)||(34777116-34777234)
chr8 (120-196)||(15068552-15068628)
chr8 (120-196)||(15173844-15173920)
chr8 (166-250)||(17084023-17084107)
chr8 (120-196)||(24568986-24569061)
chr8 (174-250)||(33631821-33631897)
chr8 (123-203)||(40248328-40248408)
chr8 (130-189)||(29918665-29918724)
chr8 (122-200)||(8545310-8545387)
chr8 (120-157)||(9642354-9642391)
chr8 (120-157)||(17469303-17469340)
chr8 (125-190)||(24189561-24189626)
chr8 (129-222)||(29416125-29416217)
chr8 (120-201)||(45236113-45236194)
[»] chr4 (45 HSPs)
chr4 (75-252)||(37349127-37349298)
chr4 (55-199)||(12505502-12505641)
chr4 (55-216)||(19883001-19883167)
chr4 (120-251)||(4741127-4741257)
chr4 (61-246)||(6382187-6382377)
chr4 (61-250)||(7608960-7609154)
chr4 (120-196)||(43309537-43309613)
chr4 (120-251)||(31918468-31918599)
chr4 (128-253)||(7334105-7334230)
chr4 (122-246)||(1724185-1724308)
chr4 (120-251)||(11028127-11028258)
chr4 (123-246)||(31752513-31752636)
chr4 (120-190)||(4737873-4737943)
chr4 (120-250)||(19548849-19548978)
chr4 (120-190)||(25941192-25941262)
chr4 (120-246)||(43893282-43893407)
chr4 (61-243)||(44317525-44317712)
chr4 (120-246)||(55826538-55826664)
chr4 (79-160)||(12825462-12825548)
chr4 (120-251)||(7985036-7985166)
chr4 (120-251)||(26564885-26565016)
chr4 (120-203)||(43553500-43553583)
chr4 (120-249)||(6481947-6482076)
chr4 (125-222)||(21956753-21956850)
chr4 (62-246)||(32585480-32585663)
chr4 (56-108)||(33516130-33516182)
chr4 (116-188)||(41914969-41915041)
chr4 (123-190)||(10302141-10302208)
chr4 (120-251)||(11122779-11122910)
chr4 (123-246)||(21423918-21424041)
chr4 (61-246)||(5902535-5902719)
chr4 (75-213)||(15987210-15987353)
chr4 (125-182)||(12075610-12075667)
chr4 (120-196)||(30673015-30673091)
chr4 (120-196)||(37107465-37107540)
chr4 (125-188)||(1866522-1866585)
chr4 (130-196)||(8843770-8843836)
chr4 (130-196)||(8856734-8856800)
chr4 (50-108)||(16575091-16575149)
chr4 (123-216)||(36306842-36306935)
chr4 (126-188)||(39086217-39086279)
chr4 (124-178)||(39375336-39375390)
chr4 (120-178)||(47239368-47239426)
chr4 (120-246)||(47550268-47550394)
chr4 (120-189)||(45065303-45065372)
[»] chr2 (33 HSPs)
chr2 (495-595)||(43854450-43854550)
chr2 (120-249)||(24414043-24414172)
chr2 (455-617)||(41381636-41381798)
chr2 (75-251)||(30846945-30847126)
chr2 (60-246)||(10920629-10920813)
chr2 (120-241)||(13830784-13830905)
chr2 (120-252)||(12341649-12341781)
chr2 (120-246)||(37106741-37106867)
chr2 (120-250)||(37472669-37472799)
chr2 (61-246)||(9632371-9632561)
chr2 (123-241)||(31942104-31942223)
chr2 (120-209)||(34214609-34214697)
chr2 (61-190)||(35248355-35248489)
chr2 (120-249)||(44746020-44746149)
chr2 (120-196)||(22900843-22900919)
chr2 (120-219)||(7314589-7314688)
chr2 (120-250)||(15546793-15546923)
chr2 (120-245)||(8915853-8915977)
chr2 (125-178)||(30978979-30979032)
chr2 (128-252)||(13954802-13954926)
chr2 (128-252)||(14096009-14096133)
chr2 (124-188)||(18106091-18106155)
chr2 (127-203)||(19104794-19104870)
chr2 (120-251)||(10208340-10208470)
chr2 (120-203)||(12193784-12193867)
chr2 (164-246)||(6027815-6027897)
chr2 (123-246)||(13705269-13705398)
chr2 (123-201)||(45115610-45115690)
chr2 (123-188)||(45256875-45256940)
chr2 (49-108)||(17845448-17845508)
chr2 (124-196)||(26755793-26755865)
chr2 (120-251)||(36128015-36128146)
chr2 (123-196)||(40734548-40734621)
[»] chr3 (37 HSPs)
chr3 (120-251)||(39655182-39655313)
chr3 (120-251)||(29284384-29284515)
chr3 (120-251)||(52572657-52572788)
chr3 (60-246)||(39728654-39728845)
chr3 (120-253)||(4557212-4557345)
chr3 (123-203)||(42243438-42243518)
chr3 (120-251)||(49580112-49580243)
chr3 (125-251)||(6738314-6738440)
chr3 (120-246)||(7469692-7469818)
chr3 (120-246)||(42758422-42758548)
chr3 (120-246)||(44953349-44953475)
chr3 (123-242)||(34119707-34119826)
chr3 (120-246)||(4015958-4016084)
chr3 (120-251)||(44639322-44639453)
chr3 (120-251)||(48390726-48390857)
chr3 (120-178)||(19111782-19111840)
chr3 (120-246)||(34026002-34026128)
chr3 (120-213)||(3414484-3414577)
chr3 (48-247)||(4553161-4553365)
chr3 (120-246)||(22535755-22535881)
chr3 (120-246)||(44252795-44252921)
chr3 (55-231)||(30904747-30904925)
chr3 (125-201)||(20087050-20087126)
chr3 (130-246)||(54317202-54317318)
chr3 (120-202)||(10043240-10043322)
chr3 (120-246)||(44106708-44106832)
chr3 (123-188)||(34154465-34154530)
chr3 (131-188)||(38347625-38347682)
chr3 (122-251)||(48305550-48305679)
chr3 (476-608)||(360575-360707)
chr3 (120-216)||(3385800-3385896)
chr3 (123-250)||(23580878-23581005)
chr3 (123-178)||(23910234-23910289)
chr3 (123-162)||(26207318-26207357)
chr3 (164-246)||(29858489-29858571)
chr3 (125-178)||(2490358-2490411)
chr3 (154-251)||(23546857-23546954)
[»] chr7 (51 HSPs)
chr7 (456-594)||(14198106-14198244)
chr7 (120-251)||(16866222-16866353)
chr7 (120-246)||(39317048-39317174)
chr7 (122-246)||(10072521-10072645)
chr7 (75-251)||(12980380-12980561)
chr7 (120-246)||(17885518-17885644)
chr7 (120-246)||(25905681-25905807)
chr7 (120-246)||(35074523-35074649)
chr7 (120-251)||(21702712-21702843)
chr7 (120-246)||(27850246-27850366)
chr7 (120-246)||(44734273-44734397)
chr7 (120-246)||(30650684-30650810)
chr7 (62-255)||(7779998-7780196)
chr7 (120-212)||(45380160-45380251)
chr7 (120-215)||(18125173-18125268)
chr7 (61-216)||(38139736-38139896)
chr7 (120-251)||(45885674-45885805)
chr7 (120-246)||(18825780-18825912)
chr7 (120-196)||(37182327-37182403)
chr7 (120-216)||(39455959-39456055)
chr7 (120-251)||(24753217-24753347)
chr7 (120-246)||(3157136-3157261)
chr7 (116-178)||(37103109-37103171)
chr7 (120-178)||(42908023-42908081)
chr7 (124-214)||(44658413-44658503)
chr7 (120-188)||(5377138-5377206)
chr7 (128-216)||(37579322-37579410)
chr7 (123-203)||(43507501-43507581)
chr7 (125-188)||(27063196-27063259)
chr7 (120-183)||(29014929-29014992)
chr7 (123-246)||(41741364-41741487)
chr7 (120-190)||(27896445-27896515)
chr7 (120-246)||(37218058-37218184)
chr7 (123-196)||(8906553-8906626)
chr7 (120-184)||(22973441-22973505)
chr7 (164-240)||(23457156-23457232)
chr7 (120-196)||(33841131-33841206)
chr7 (120-251)||(3226855-3226986)
chr7 (121-196)||(3274648-3274722)
chr7 (50-190)||(4101520-4101665)
chr7 (147-246)||(17851932-17852031)
chr7 (120-162)||(10995832-10995874)
chr7 (164-246)||(26004400-26004482)
chr7 (120-178)||(30839116-30839174)
chr7 (122-216)||(38152942-38153035)
chr7 (125-178)||(2472041-2472094)
chr7 (125-178)||(3909255-3909308)
chr7 (120-157)||(23475266-23475303)
chr7 (165-246)||(24425466-24425547)
chr7 (120-204)||(10990817-10990901)
chr7 (120-160)||(42005957-42005997)
[»] chr1 (38 HSPs)
chr1 (120-246)||(19572426-19572552)
chr1 (120-196)||(34085284-34085360)
chr1 (62-246)||(36187134-36187323)
chr1 (120-246)||(23968628-23968754)
chr1 (120-178)||(33293513-33293571)
chr1 (123-203)||(13798290-13798370)
chr1 (120-196)||(24710896-24710972)
chr1 (120-250)||(44615385-44615515)
chr1 (120-250)||(44793054-44793184)
chr1 (120-196)||(10778531-10778607)
chr1 (122-246)||(24236675-24236799)
chr1 (120-216)||(51421907-51422003)
chr1 (120-203)||(16408991-16409074)
chr1 (120-231)||(34611122-34611233)
chr1 (123-246)||(34673196-34673319)
chr1 (61-251)||(49250682-49250877)
chr1 (125-224)||(2514811-2514911)
chr1 (123-246)||(17134999-17135122)
chr1 (120-246)||(5181088-5181214)
chr1 (120-246)||(12495059-12495185)
chr1 (124-216)||(39616345-39616437)
chr1 (120-251)||(9982799-9982930)
chr1 (133-251)||(5293315-5293432)
chr1 (60-246)||(29936400-29936597)
chr1 (120-196)||(18354044-18354120)
chr1 (120-196)||(19003630-19003706)
chr1 (120-216)||(23490715-23490811)
chr1 (120-196)||(29871249-29871325)
chr1 (159-246)||(20774654-20774741)
chr1 (139-190)||(41476922-41476973)
chr1 (123-246)||(45866100-45866222)
chr1 (120-178)||(16237286-16237344)
chr1 (120-170)||(35936819-35936869)
chr1 (133-190)||(36617423-36617481)
chr1 (120-178)||(42707819-42707877)
chr1 (125-183)||(42728922-42728979)
chr1 (164-250)||(47644782-47644868)
chr1 (130-246)||(13390456-13390571)
[»] scaffold0157 (1 HSPs)
scaffold0157 (55-199)||(14836-14975)
[»] scaffold0198 (1 HSPs)
scaffold0198 (14-159)||(20740-20890)
[»] scaffold0009 (1 HSPs)
scaffold0009 (120-190)||(107361-107431)
[»] scaffold0036 (1 HSPs)
scaffold0036 (120-173)||(33441-33494)
[»] scaffold0022 (1 HSPs)
scaffold0022 (123-233)||(90648-90752)
[»] scaffold0184 (1 HSPs)
scaffold0184 (125-178)||(3022-3075)
[»] scaffold0189 (1 HSPs)
scaffold0189 (123-153)||(4309-4339)
[»] scaffold0008 (2 HSPs)
scaffold0008 (128-196)||(67805-67873)
scaffold0008 (128-196)||(75648-75716)


Alignment Details
Target: chr6 (Bit Score: 389; Significance: 0; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 389; E-Value: 0
Query Start/End: Original strand, 185 - 617
Target Start/End: Complemental strand, 7978563 - 7978132
Alignment:
Q  185 aaaacctgtcaatttgggtgtagttcgggcggttacccacaggtatgagctttgttgccatgtctaagagatgtataccatatttagaaatcaagtttga 284  Q
    ||||||||||||||| ||| |  |||||||||| | |||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  7978563 aaaacctgtcaatttaggtttgattcgggcggt-atccacgggtatgaactttgttgccatgtctaagagctgtataccatatttagaaatcaagtttga 7978465  T
Q  285 aatactacttgaaatatgagcattttgatcttcatatagtactagacaacatgttaattgaaactttggtatttgaattttcctacagttactctacaat 384  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7978464 aatactacttgaaatatgagcattttgatcttcatatagtactagacaacatgttaattgaaactttggtatttgaattttcctacagttactctacaat 7978365  T
Q  385 ttcctgggcagctagtctagataaaggaaaacaagaaaatgtagaatatggatataaggcacatagtacagcaggaacagtctttgacttctttaatgca 484  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7978364 ttcctgggcagctagtctagataaaggaaaacaagaaaatgtacaatatggatataaggcacatagtacagcaggaacagtctttgacttctttaatgca 7978265  T
Q  485 cttggcactattgcttttgcctatgctggacacaatgtggtgttagagatccaagcaacaattccgtcgacaccggagaaaccatccaaggttccaatgt 584  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7978264 cttggcactattgcttttgcctatgctggacacaatgtggtgttagagatccaagcaacaattccgtcgacaccggagaaaccatccaaggttccaatgt 7978165  T
Q  585 ggagaggagttgttgttgcatacattgttgttg 617  Q
    |||||||||||||||||||||||||||||||||    
T  7978164 ggagaggagttgttgttgcatacattgttgttg 7978132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 455 - 617
Target Start/End: Original strand, 8042352 - 8042514
Alignment:
Q  455 gcaggaacagtctttgacttctttaatgcacttggcactattgcttttgcctatgctggacacaatgtggtgttagagatccaagcaacaattccgtcga 554  Q
    |||||| | |||||| | |||||||||||||||||| || |||| ||||||| ||||||||||| ||||||| | ||||||||||||||||||||||| |    
T  8042352 gcaggatctgtcttttatttctttaatgcacttggctctgttgcatttgcctttgctggacacattgtggtgctggagatccaagcaacaattccgtcta 8042451  T
Q  555 caccggagaaaccatccaaggttccaatgtggagaggagttgttgttgcatacattgttgttg 617  Q
    |||||||||||||||| |||| ||||||||||| ||||||||||||||| |||||| ||||||    
T  8042452 caccggagaaaccatctaagggtccaatgtggaaaggagttgttgttgcctacattattgttg 8042514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 462 - 617
Target Start/End: Original strand, 8032455 - 8032610
Alignment:
Q  462 cagtctttgacttctttaatgcacttggcactattgcttttgcctatgctggacacaatgtggtgttagagatccaagcaacaattccgtcgacaccgga 561  Q
    |||||||| | |||||||||||||| ||| || |||| ||||||||||||||||| ||||||||| | |||||||||||||||||||| || ||||| ||    
T  8032455 cagtctttaatttctttaatgcactcggctctgttgcatttgcctatgctggacataatgtggtgctcgagatccaagcaacaattccatctacacctga 8032554  T
Q  562 gaaaccatccaaggttccaatgtggagaggagttgttgttgcatacattgttgttg 617  Q
    ||||||||| |||| ||||||||||||||| ||||||||||| |||||||||||||    
T  8032555 gaaaccatctaagggtccaatgtggagaggtgttgttgttgcctacattgttgttg 8032610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 455 - 617
Target Start/End: Complemental strand, 7971361 - 7971199
Alignment:
Q  455 gcaggaacagtctttgacttctttaatgcacttggcactattgcttttgcctatgctggacacaatgtggtgttagagatccaagcaacaattccgtcga 554  Q
    |||||| | |||||| | |||||||||||||||||| || |||| ||||||| ||| |||||||| |||||| | ||||||||||||||||||||||| |    
T  7971361 gcaggatctgtctttaatttctttaatgcacttggctctgttgcatttgcctttgccggacacaacgtggtgctggagatccaagcaacaattccgtcta 7971262  T
Q  555 caccggagaaaccatccaaggttccaatgtggagaggagttgttgttgcatacattgttgttg 617  Q
    |||| ||||||||||| |||| ||||||||||| ||||||| |||||||||||||||||||||    
T  7971261 cacctgagaaaccatctaagggtccaatgtggaaaggagttattgttgcatacattgttgttg 7971199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 60 - 246
Target Start/End: Complemental strand, 10188178 - 10187994
Alignment:
Q  60 attttttacattcaagacgggtttgggtataggttcagggtggatactttatatcccccttcccatacccgtgttttgaaatcgagaaaaacccaaactc 159  Q
    ||||||||||||   || |||||||||||| ||||| |||||| ||| | |||| ||| | |||||||||||||||||| |||| | |||||||| || |    
T  10188178 attttttacatttgggatgggtttgggtatgggttcggggtgggtacct-atatacccgt-cccatacccgtgttttgagatcggggaaaacccataccc 10188081  T
Q  160 atatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttacccacaggtatgagctttgttgccatg 246  Q
    ||| ||||||||| ||||| ||||||||||| ||||| |||||| | |||||||||| || |||| |||||| | ||||||||||||    
T  10188080 atacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacgggtatgggttttgttgccatg 10187994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 120 - 245
Target Start/End: Complemental strand, 5863423 - 5863298
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    |||||||||||||||||||||||| | |||||||| || |||| ||||||||| ||||| ||||||||||| ||||| |||||| | |||||||| | ||    
T  5863423 tcccatacccgtgttttgaaatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgggcaggta 5863324  T
Q  220 cccacaggtatgagctttgttgccat 245  Q
     |||| |||||| | |||||||||||    
T  5863323 accacgggtatgggttttgttgccat 5863298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 60 - 249
Target Start/End: Original strand, 32853827 - 32854021
Alignment:
Q  60 attttttacattcaagacgggtttgggtataggttcagggtggatactt-tatatcc----cccttcccatacccgtgttttgaaatcgagaaaaaccca 154  Q
    ||||||||||||   ||||||||||||||| ||||| |||||| ||| | |||| ||    ||| ||||||||||||||||||| |||| | ||||||||    
T  32853827 attttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaaccca 32853926  T
Q  155 aactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttacccacaggtatgagctttgttgccatgtct 249  Q
     || |||| ||||||||| ||||| ||| ||||||| ||||| |||||| | |||||| ||| || |||| |||||| | |||||||||||||||    
T  32853927 tacccataaccaaacccagtcaaaacggagaaaacccgtcaaattgggtttggttcggtcggataaccacgggtatgggttttgttgccatgtct 32854021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 120 - 254
Target Start/End: Original strand, 27534732 - 27534866
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    |||||||||||||||| || |||| | ||||| || || |||| ||||||||||||||| ||||||||||| ||||| ||| || | |||||| ||||||    
T  27534732 tcccatacccgtgtttcgagatcggggaaaactcatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattgagtttggttcggacggtta 27534831  T
Q  220 cccacaggtatgagctttgttgccatgtctaagag 254  Q
     |||| |||||| | |||||||||||| |||||||    
T  27534832 accacgggtatgggttttgttgccatgcctaagag 27534866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 120 - 251
Target Start/End: Original strand, 30986301 - 30986432
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    ||||||||||||||||||| |||| | |||||||| || |||| |||||| || ||||| ||||||||||| ||||| ||| || | |||||||||| ||    
T  30986301 tcccatacccgtgttttgagatcggggaaaacccatacccatacccaaactcagtcaaaacggggaaaacccgtcaaattgagtttggttcgggcgggta 30986400  T
Q  220 cccacaggtatgagctttgttgccatgtctaa 251  Q
     |||| |||||| | |||||||||||| ||||    
T  30986401 accacgggtatgggttttgttgccatgcctaa 30986432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 61 - 246
Target Start/End: Complemental strand, 3484027 - 3483837
Alignment:
Q  61 ttttttacattcaagacgggtttgggtataggttcagggtggatactt-tatatcc----cccttcccatacccgtgttttgaaatcgagaaaaacccaa 155  Q
    |||||||||||   ||||||||||||||| ||||| |||||| ||| | |||| ||    ||| |||||||||||||||| || |||| | ||||||||     
T  3484027 ttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccatcccatacccgtgtttcgagatcggggaaaacccat 3483928  T
Q  156 actcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttacccacaggtatgagctttgttgccatg 246  Q
    || |||| ||||||||| ||||| ||||||||||| ||||| |||||| | |||||||||| || |||   ||||| | ||||||||||||    
T  3483927 acacatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgggcgggtaaccatgagtatgggttttgttgccatg 3483837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 75 - 251
Target Start/End: Original strand, 2367324 - 2367505
Alignment:
Q  75 gacgggtttgggtataggttcagggtggatactt-tatatcc----cccttcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaac 169  Q
    ||||||||||||||| ||||| |||||| ||||| |||| ||    ||| ||||||||||||||||||| |||| | |||||||| || |||| ||||||    
T  2367324 gacgggtttgggtatgggttcggggtgggtacttatatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccatacccatacccaaac 2367423  T
Q  170 ccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttacccacaggtatgagctttgttgccatgtctaa 251  Q
    | | ||||| |||| ||||||  |||| |||||| | |||||| ||| || |||| | |||| | |||||||||||| ||||    
T  2367424 ctagtcaaaacgggaaaaacccatcaaattgggtttggttcggacgggtaaccacggatatgggttttgttgccatgcctaa 2367505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 75 - 194
Target Start/End: Complemental strand, 12678184 - 12678060
Alignment:
Q  75 gacgggtttgggtataggttcagggtggatactt-tatatcc----cccttcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaac 169  Q
    ||||||||||||||| |||||||||||| ||| | |||| ||    ||| ||||||||| |||| ||||||||| | ||||| |||||||||| ||||||    
T  12678184 gacgggtttgggtatgggttcagggtgggtacctatataccctttacccgtcccatacctgtgtcttgaaatcggggaaaacgcaaactcatacccaaac 12678085  T
Q  170 ccaatcaaagcggggaaaacctgtc 194  Q
    ||| ||||| ||| |||||||||||    
T  12678084 ccagtcaaaacggcgaaaacctgtc 12678060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 60 - 246
Target Start/End: Original strand, 12141368 - 12141559
Alignment:
Q  60 attttttacattcaagacgggtttgggtataggttcagggtggatactt-tatatcc----cccttcccatacccgtgttttgaaatcgagaaaaaccca 154  Q
    ||||||||||||   ||||||||||||||| ||||| |||||| ||| | |||| ||    ||| ||||||| ||||||||||| || | | ||||||||    
T  12141368 attttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgtcacccgtcccatatccgtgttttgagattggggaaaaccca 12141467  T
Q  155 aactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttacccacaggtatgagctttgttgccatg 246  Q
     || | || ||||||||| ||||| ||||||||||| ||||| |||  | | |||||||||| || ||| ||||||| | ||||||||||||    
T  12141468 tacccgtacccaaacccagtcaaaacggggaaaacccgtcaaattgaatttggttcgggcgggtaaccataggtatgggttttgttgccatg 12141559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 41 - 203
Target Start/End: Original strand, 13769036 - 13769203
Alignment:
Q  41 taaaaggaataatgaattgattttttacattcaagacgggtttgggtataggttcagggtggata-ctttatatcc----cccttcccatacccgtgttt 135  Q
    |||||||| |||| |||||||||| |||||||| ||||||||||| ||| ||||| |||||| || || ||| |||    ||| |||||||||| |||||    
T  13769036 taaaaggagtaataaattgattttctacattcaggacgggtttggatatgggttctgggtgggtacctatatgtccgttacccgtcccatacccatgttt 13769135  T
Q  136 tgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 203  Q
    |||| ||| | |||||| |||| |||| | ||||||| |||||||| | |||||| || || ||||||    
T  13769136 tgaagtcggggaaaaccgaaacccatacctaaacccagtcaaagcgagtaaaacccgtgaaattgggt 13769203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 138 - 189
Target Start/End: Original strand, 29341322 - 29341373
Alignment:
Q  138 aaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaac 189  Q
    |||||| |||||||||||||||||||||||||||||||||| ||| ||||||    
T  29341322 aaatcgggaaaaacccaaactcatatccaaacccaatcaaaacggagaaaac 29341373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 123 - 198
Target Start/End: Complemental strand, 32054261 - 32054187
Alignment:
Q  123 catacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatt 198  Q
    ||||||| |||||||||||| ||||||||||||||||||| || |||||| | |||||||| |||||| |||||||    
T  32054261 catacccatgttttgaaatcaagaaaaacccaaactcata-cctaacccagtaaaagcgggaaaaacccgtcaatt 32054187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 246
Target Start/End: Complemental strand, 10142558 - 10142432
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    |||||||||||| |||||| |||| | |||||||| || |||| ||||||||| ||||| || |||||||| | ||| ||| || | ||||| |||| ||    
T  10142558 tcccatacccgttttttgagatcggggaaaacccatacccatacccaaacccagtcaaaacgaggaaaacccgccaaattgagtttggttcgagcggata 10142459  T
Q  220 cccacaggtatgagctttgttgccatg 246  Q
     ||||| ||||| | ||||||||||||    
T  10142458 accacaagtatgggttttgttgccatg 10142432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 190
Target Start/End: Original strand, 27738755 - 27738890
Alignment:
Q  60 attttttacattcaagacgggtttgggtataggttcagggtggatactt-tatatcc----cccttcccatacccgtgttttgaaatcgagaaaaaccca 154  Q
    ||||||||||||   ||||||||||||||| ||||| |||||| ||| | ||||||     ||| |||||||||||||||||||||||| | ||||||||    
T  27738755 attttttacatttgggacgggtttgggtatgggttcggggtgggtacatatatatctgttacccgtcccatacccgtgttttgaaatcggggaaaaccca 27738854  T
Q  155 aactcatatccaaacccaatcaaagcggggaaaacc 190  Q
     || |||| | ||||||| ||||| |||| ||||||    
T  27738855 tacccatacctaaacccagtcaaaacgggaaaaacc 27738890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 120 - 213
Target Start/End: Original strand, 9442478 - 9442570
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcggg 213  Q
    |||||||||||||||||||||||| ||||| |||| || |||| ||||| ||| ||||| ||||||||||| ||||| ||| || | |||||||    
T  9442478 tcccatacccgtgttttgaaatcgggaaaatcccatacccatacccaaa-ccagtcaaaacggggaaaacccgtcaaattgagtttggttcggg 9442570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 113 - 246
Target Start/End: Original strand, 31496475 - 31496608
Alignment:
Q  113 tcccccttcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgg 212  Q
    |||||| |||||||||| ||||| || |||| | ||||| || || |||| ||||||||| ||||| ||||||||||| ||||| ||| || | ||| ||    
T  31496475 tcccccgtcccatacccatgtttcgagatcggggaaaactcatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgagtttggtttgg 31496574  T
Q  213 gcggttacccacaggtatgagctttgttgccatg 246  Q
     ||| || |||| |||||| | ||||||||||||    
T  31496575 acgggtaaccacgggtatgggttttgttgccatg 31496608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 113 - 246
Target Start/End: Original strand, 31501861 - 31501994
Alignment:
Q  113 tcccccttcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgg 212  Q
    |||||| |||||||||| ||||| || |||| | ||||| || || |||| ||||||||| ||||| ||||||||||| ||||| ||| || | ||| ||    
T  31501861 tcccccgtcccatacccatgtttcgagatcggggaaaactcatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgagtttggtttgg 31501960  T
Q  213 gcggttacccacaggtatgagctttgttgccatg 246  Q
     ||| || |||| |||||| | ||||||||||||    
T  31501961 acgggtaaccacgggtatgggttttgttgccatg 31501994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 32532588 - 32532669
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgg 201  Q
    |||||||||||||||||||||||| | |||||||| |||||||  |||||||||| ||| |||  |||||| ||||| ||||    
T  32532588 tcccatacccgtgttttgaaatcggggaaaacccatactcatactcaaacccaatgaaaacggaaaaaacccgtcaaattgg 32532669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 125 - 188
Target Start/End: Complemental strand, 256527 - 256464
Alignment:
Q  125 tacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaa 188  Q
    ||||| ||||||||||||| | ||||| |||||||||| |||||| ||| ||||||||||||||    
T  256527 tacccatgttttgaaatcggggaaaactcaaactcatacccaaacacaaccaaagcggggaaaa 256464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 120 - 251
Target Start/End: Original strand, 20349112 - 20349243
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    |||||||||||||||||||||||| | |||| ||||||||||| | |||| |||| |||||||  ||     ||||| |||||| | |||||||| | ||    
T  20349112 tcccatacccgtgttttgaaatcggggaaaatccaaactcataccaaaactcaataaaagcggaaaattatagtcaaattgggtttggttcgggcaggta 20349211  T
Q  220 cccacaggtatgagctttgttgccatgtctaa 251  Q
     ||||||||||||| ||| ||| |||| ||||    
T  20349212 gccacaggtatgagttttattgtcatgcctaa 20349243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 11762493 - 11762574
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgg 201  Q
    |||||||||| ||||| ||||||| |||||||| |||  |||||||||||||| | |||  |||||||||| ||||| ||||    
T  11762493 tcccatacccttgtttagaaatcgggaaaaacctaaatccatatccaaacccagtaaaaatggggaaaacccgtcaaattgg 11762574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 123 - 216
Target Start/End: Original strand, 15498375 - 15498468
Alignment:
Q  123 catacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcgg 216  Q
    ||||||||||||||||||||| | |||||||| |  |||| ||||||||| ||||| ||| ||||||| || || |||||| |  |||||||||    
T  15498375 catacccgtgttttgaaatcggggaaaacccatatccatacccaaacccattcaaaacggagaaaacccgttaaattgggtttgattcgggcgg 15498468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 251
Target Start/End: Original strand, 24225796 - 24225883
Alignment:
Q  164 ccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttacccacaggtatgagctttgttgccatgtctaa 251  Q
    ||||||||||||||| ||||||||||||||||| |||  | | |||||| ||| || |||  |||||||| ||||||| |||| ||||    
T  24225796 ccaaacccaatcaaaacggggaaaacctgtcaaattgaatttggttcggacgggtaaccatgggtatgagttttgttgtcatgcctaa 24225883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 188
Target Start/End: Original strand, 30816333 - 30816374
Alignment:
Q  147 aaaacccaaactcatatccaaacccaatcaaagcggggaaaa 188  Q
    ||||| ||||| |||||||||||||||||||| |||||||||    
T  30816333 aaaactcaaacccatatccaaacccaatcaaaacggggaaaa 30816374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 28079736 - 28079660
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 196  Q
    |||| ||||| ||||||||||||| | ||||||||||| |||| |||||| ||  ||||||||| || ||| |||||    
T  28079736 tcccgtacccatgttttgaaatcggggaaaacccaaacccatacccaaactcagccaaagcgggaaatacccgtcaa 28079660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 229; Significance: 1e-126; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 6 - 250
Target Start/End: Original strand, 39422280 - 39422524
Alignment:
Q  6 aggagcagagagaacttagagaagtgagtgccgtctaaaaggaataatgaattgattttttacattcaagacgggtttgggtataggttcagggtggata 105  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  39422280 aggagaagagagaacttagagaagtgagtgccgtctaaaaggaataatgaattgattttttacattcaagacgggtttgggtataggttcagggtgggta 39422379  T
Q  106 ctttatatcccccttcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgt 205  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39422380 ccttatatcccccttcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgt 39422479  T
Q  206 agttcgggcggttacccacaggtatgagctttgttgccatgtcta 250  Q
     ||||||||||||||||||||||||||||||||||||||||||||    
T  39422480 ggttcgggcggttacccacaggtatgagctttgttgccatgtcta 39422524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 120 - 251
Target Start/End: Original strand, 4583167 - 4583298
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    |||||||||||||||||||||||| | |||||||| || |||||||||||||||||||| ||||||||||| ||||| |||||| | |||||||||| ||    
T  4583167 tcccatacccgtgttttgaaatcggggaaaacccatacccatatccaaacccaatcaaaacggggaaaacccgtcaaattgggtttggttcgggcgggta 4583266  T
Q  220 cccacaggtatgagctttgttgccatgtctaa 251  Q
     ||   | |||||| |||||||||||| ||||    
T  4583267 accgtggatatgagttttgttgccatgcctaa 4583298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 60 - 246
Target Start/End: Original strand, 4920809 - 4921000
Alignment:
Q  60 attttttacattcaagacgggtttgggtataggttcagggtggatactt-tatatcc----cccttcccatacccgtgttttgaaatcgagaaaaaccca 154  Q
    ||||||||||||   ||||||||||||||| ||||| |||||||||| | |||| ||    ||| ||||||||||||||||||| |||| | ||||||||    
T  4920809 attttttacatttgggacgggtttgggtatgggttcggggtggatacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaaccca 4920908  T
Q  155 aactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttacccacaggtatgagctttgttgccatg 246  Q
     || |||| ||||||||| ||||| ||| ||||||| ||||| |||||| | |||||||||| || |||| |||||| | ||||||||||||    
T  4920909 tacccataaccaaacccagtcaaaacggagaaaacccgtcaaattgggtttggttcgggcgggtaaccacgggtatgggttttgttgccatg 4921000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 120 - 246
Target Start/End: Complemental strand, 33728042 - 33727916
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    ||||||||||||||||||| |||| | |||| ||| || |||||||||||||||||||| ||||||||| | ||||| |||||| | |||||||||| ||    
T  33728042 tcccatacccgtgttttgagatcggggaaaatccatacccatatccaaacccaatcaaaacggggaaaatccgtcaaattgggtttggttcgggcgggta 33727943  T
Q  220 cccacaggtatgagctttgttgccatg 246  Q
     |||| |||||| | ||||||||||||    
T  33727942 accacgggtatgggttttgttgccatg 33727916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 126 - 250
Target Start/End: Complemental strand, 40187692 - 40187568
Alignment:
Q  126 acccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttacccaca 225  Q
    |||||||||||||||| | | ||||||||||||||| |||||||||| |||||||| |||||||| |||||  || || | |||||| ||| ||||| ||    
T  40187692 acccgtgttttgaaattggggaaaacccaaactcatttccaaacccagtcaaagcgaggaaaacccgtcaaaatgagtttggttcggacgggtacccgca 40187593  T
Q  226 ggtatgagctttgttgccatgtcta 250  Q
    |||||||| |||| |||||||||||    
T  40187592 ggtatgagttttgctgccatgtcta 40187568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 60 - 231
Target Start/End: Original strand, 10127064 - 10127233
Alignment:
Q  60 attttttacattcaagacgggtttgggtataggttcagggtggatactttatatcccccttcccatacccgtgttttgaaatcgagaaaaacccaaactc 159  Q
    ||||||||||||   ||||||||||||||| ||||| |||||| ||| | |||| ||| | |||||||||||||||||| |||| | |||||||| || |    
T  10127064 attttttacatttgggacgggtttgggtatgggttcggggtgggtacct-atatacccgt-cccatacccgtgttttgagatcggggaaaacccataccc 10127161  T
Q  160 atatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttacccacaggtatg 231  Q
    ||| ||||||||| ||||| ||||||||||| ||||| |||| | | |||||||||| || |||| ||||||    
T  10127162 atacccaaacccagtcaaaacggggaaaacccgtcaaattggatttggttcgggcggataaccacgggtatg 10127233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 38972970 - 38973046
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 196  Q
    |||||||||| ||||||||||||| |||||||||||||||||| | ||||||| ||||| |||||||||||||||||    
T  38972970 tcccatacccatgttttgaaatcgggaaaaacccaaactcatacctaaacccagtcaaaacggggaaaacctgtcaa 38973046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 120 - 246
Target Start/End: Original strand, 18207066 - 18207192
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    |||||||| || |||||||||||||| |||||||||||||||  ||||||||| ||||| |||| |||||  ||||| |||||| | ||| ||| || ||    
T  18207066 tcccatacacgagttttgaaatcgaggaaaacccaaactcatgcccaaacccagtcaaaacgggaaaaacacgtcaaattgggtttggtttgggtgggta 18207165  T
Q  220 cccacaggtatgagctttgttgccatg 246  Q
     |||| |||||||| ||||||||||||    
T  18207166 accacgggtatgagttttgttgccatg 18207192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 129 - 241
Target Start/End: Complemental strand, 16311325 - 16311213
Alignment:
Q  129 cgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttacccacaggt 228  Q
    |||||||||||||||  |||||| ||||||||||||||||||||||||||||||| |||| | ||||| || ||| | |||| ||||| ||||| | | |    
T  16311325 cgtgttttgaaatcggaaaaaactcaaactcatatccaaacccaatcaaagcgggaaaaaaccgtcaaattaggtttggttcaggcgggtacccgcggat 16311226  T
Q  229 atgagctttgttg 241  Q
    ||||| |||||||    
T  16311225 atgagttttgttg 16311213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 120 - 246
Target Start/End: Complemental strand, 5908729 - 5908603
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    |||||||||||||||| || |||| | ||||| || || |||| |||||||||||||||  |||||||||| ||||| |||||| | |||||||||| ||    
T  5908729 tcccatacccgtgtttcgagatcggggaaaactcatacccatacccaaacccaatcaaaatggggaaaacccgtcaaattgggtttggttcgggcggata 5908630  T
Q  220 cccacaggtatgagctttgttgccatg 246  Q
     |||| ||||||   ||||||||||||    
T  5908629 accacgggtatggattttgttgccatg 5908603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 120 - 246
Target Start/End: Complemental strand, 20973537 - 20973411
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    ||||||||||||||||  |||||| | |||||||| || |||| ||||||||| ||||| ||||||||||| ||||   ||||| | |||||||||| ||    
T  20973537 tcccatacccgtgtttgaaaatcggggaaaacccatacccataaccaaacccagtcaaaacggggaaaacccgtcagaatgggtttggttcgggcgggta 20973438  T
Q  220 cccacaggtatgagctttgttgccatg 246  Q
     || | |||||| | ||||||||||||    
T  20973437 accgcgggtatgggttttgttgccatg 20973411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 120 - 250
Target Start/End: Complemental strand, 29245992 - 29245862
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    ||||||||||||||||||||||||   ||||| || || |||| ||||||| | ||||| ||||||||||| ||||| ||| || | |||||||||| ||    
T  29245992 tcccatacccgtgttttgaaatcggagaaaactcatacccatacccaaacctagtcaaaacggggaaaacccgtcaaattgagtttggttcgggcgggta 29245893  T
Q  220 cccacaggtatgagctttgttgccatgtcta 250  Q
     || | |||||| | ||||||| ||||||||    
T  29245892 accgcgggtatgggttttgttgtcatgtcta 29245862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 125 - 190
Target Start/End: Complemental strand, 6092565 - 6092500
Alignment:
Q  125 tacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacc 190  Q
    |||||||||||||| |||| |||||||||| || |||| ||||||||||||||| |||||||||||    
T  6092565 tacccgtgttttgagatcgggaaaaacccatacccatacccaaacccaatcaaaacggggaaaacc 6092500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 124 - 251
Target Start/End: Complemental strand, 6155957 - 6155830
Alignment:
Q  124 atacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttaccca 223  Q
    |||||||||||||||||||| | ||||||||||| |||| ||||||||| ||||| ||  ||||||| || || || | | | || |||| || || ||     
T  6155957 atacccgtgttttgaaatcggggaaaacccaaacacatacccaaacccagtcaaaacgaagaaaacccgttaaatttgatttggtacgggtggataaccg 6155858  T
Q  224 caggtatgagctttgttgccatgtctaa 251  Q
    |||||||||| |||||||||||| ||||    
T  6155857 caggtatgagttttgttgccatgcctaa 6155830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 254
Target Start/End: Original strand, 15890254 - 15890388
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    ||||||||||||||||||||||||   |||||||| || |||| ||||||| | ||||| |||| |||||| ||||| |||| | | |||||||||| ||    
T  15890254 tcccatacccgtgttttgaaatcggagaaaacccatacacatagccaaacctagtcaaaacgggaaaaacccgtcaaattggatttggttcgggcgggta 15890353  T
Q  220 cccacaggtatgagctttgttgccatgtctaagag 254  Q
     || |  ||||| | ||||||| |||| |||||||    
T  15890354 accgcgagtatgggttttgttgtcatgcctaagag 15890388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 246
Target Start/End: Complemental strand, 17853333 - 17853208
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    |||||||||||||||| ||||||| | |||||||| |  |||| ||||||||||||||| ||||||||||| ||||| || ||| | |||| || || ||    
T  17853333 tcccatacccgtgttt-gaaatcggggaaaacccatatccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcaggtgggta 17853235  T
Q  220 cccacaggtatgagctttgttgccatg 246  Q
     || | |||||| | ||||||||||||    
T  17853234 accgcgggtatgcgttttgttgccatg 17853208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 244
Target Start/End: Complemental strand, 12866592 - 12866468
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    |||||||||| |||||||||||||   ||||| || || |||| ||||||||| |||||  |||||||||| ||||| |||| | | |||||| ||| ||    
T  12866592 tcccatacccatgttttgaaatcggagaaaactcatacccatacccaaacccagtcaaaatggggaaaacccgtcaaattggatttggttcggacgggta 12866493  T
Q  220 cccacaggtatgagctttgttgcca 244  Q
     ||||| ||||| | ||||||||||    
T  12866492 accacatgtatgggttttgttgcca 12866468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 120 - 251
Target Start/End: Original strand, 40517854 - 40517985
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    ||||||||||||||||||  |||| | |||||||| || |||| ||||||||| ||||| |||| |||| | ||||| |||  | | |||| ||||| ||    
T  40517854 tcccatacccgtgttttgggatcggggaaaacccatacccatacccaaacccagtcaaaacgggaaaaatccgtcaaattgaatttggttcaggcgggta 40517953  T
Q  220 cccacaggtatgagctttgttgccatgtctaa 251  Q
     |||| |||||| | |||||||||||| ||||    
T  40517954 accacgggtatgggttttgttgccatgcctaa 40517985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 120 - 174
Target Start/End: Complemental strand, 27900442 - 27900388
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaat 174  Q
    |||||||||| ||||||||||||| ||||||| |||||  |||||||||||||||    
T  27900442 tcccatacccatgttttgaaatcgggaaaaactcaaacctatatccaaacccaat 27900388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 78 - 196
Target Start/End: Original strand, 2681217 - 2681340
Alignment:
Q  78 gggtttgggtataggttcagggtggatactttatatccccctt------cccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaaccc 171  Q
    |||||||||||| ||||| |||||||||||  |||||||| ||      ||| |||| || ||||||||||| | |||||||||||||||  |||||| |    
T  2681217 gggtttgggtatgggttcggggtggatactc-atatccccattacccatcccgtacctgtattttgaaatcggggaaaacccaaactcatgcccaaactc 2681315  T
Q  172 aatcaaagcggggaaaacctgtcaa 196  Q
    | ||||| ||||||||||| |||||    
T  2681316 agtcaaatcggggaaaacccgtcaa 2681340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 122 - 251
Target Start/End: Complemental strand, 13402043 - 13401914
Alignment:
Q  122 ccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttacc 221  Q
    ||||||||||||||  |||||| ||||||| || || |||| ||||||| | ||||| |||  |||| | ||||| |||||| | |||||||||| || |    
T  13402043 ccatacccgtgtttgaaaatcgggaaaaactcatacccatacccaaacctagtcaaaacggaaaaaatccgtcaaattgggtttggttcgggcgggtaac 13401944  T
Q  222 cacaggtatgagctttgttgccatgtctaa 251  Q
    | | |||||| | |||||||||||| ||||    
T  13401943 cgcgggtatgggttttgttgccatgcctaa 13401914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 120 - 188
Target Start/End: Complemental strand, 2412767 - 2412699
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaa 188  Q
    |||||||||||||||||||||| | ||||||  ||||| |||| |||||| ||||||||  ||||||||    
T  2412767 tcccatacccgtgttttgaaattgggaaaaattcaaacccatacccaaactcaatcaaaatggggaaaa 2412699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 124 - 188
Target Start/End: Original strand, 24207736 - 24207800
Alignment:
Q  124 atacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaa 188  Q
    ||||| |||||||||||||| | ||||| ||||| |||| |||||| ||||||||||||| ||||    
T  24207736 atacctgtgttttgaaatcggggaaaactcaaacccatacccaaactcaatcaaagcgggaaaaa 24207800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 28569062 - 28568986
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 196  Q
    |||| ||||||  ||||||||||| | |||| ||||||||||| ||||||||| ||||| | ||||||||| |||||    
T  28569062 tcccgtacccgcattttgaaatcggggaaaatccaaactcatacccaaacccagtcaaatcagggaaaacccgtcaa 28568986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 240
Target Start/End: Complemental strand, 42717643 - 42717551
Alignment:
Q  148 aaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttacccacaggtatgagctttgtt 240  Q
    ||||||| || |||| ||||| ||| ||||| |||| |||||| ||||| |||||| | |||||| ||| || ||||||||||||| ||||||    
T  42717643 aaacccatacccatacccaaatccagtcaaaacgggaaaaacccgtcaaattgggtttggttcggacgggtaaccacaggtatgagttttgtt 42717551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 120 - 247
Target Start/End: Complemental strand, 22694942 - 22694816
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    |||||||||||| |||||| |||| | ||| |||| || |||| ||||||||| | ||| |||| |||  | ||||| |||||| | |||||||||| ||    
T  22694942 tcccatacccgtattttgagatcggggaaa-cccatacccatacccaaacccagttaaaacgggaaaattccgtcaaattgggtttggttcgggcgggta 22694844  T
Q  220 cccacaggtatgagctttgttgccatgt 247  Q
     |||| |||||| | |||||||||||||    
T  22694843 accacgggtatgggttttgttgccatgt 22694816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 188
Target Start/End: Original strand, 43523801 - 43523864
Alignment:
Q  125 tacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaa 188  Q
    ||||||| ||||||||||| | |||||||||||||||| |||||| || ||||| |||| ||||    
T  43523801 tacccgtattttgaaatcggggaaaacccaaactcatacccaaactcagtcaaatcgggaaaaa 43523864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 245
Target Start/End: Complemental strand, 12834615 - 12834490
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    ||||||| || ||||||||||| |   |||||||| || |||| ||||||||| |||||  |||||||||| ||||| ||| || | |||||| ||| ||    
T  12834615 tcccatatccatgttttgaaattggagaaaacccatacccatacccaaacccagtcaaaatggggaaaacccgtcaaattgagtttggttcggacgggta 12834516  T
Q  220 cccacaggtatgagctttgttgccat 245  Q
     ||||| ||||| | |||||| ||||    
T  12834515 accacatgtatgggttttgttaccat 12834490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 97
Target Start/End: Complemental strand, 33420437 - 33420400
Alignment:
Q  60 attttttacattcaagacgggtttgggtataggttcag 97  Q
    ||||| |||||||||||||||||||||||| |||||||    
T  33420437 attttctacattcaagacgggtttgggtatgggttcag 33420400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 124 - 160
Target Start/End: Original strand, 3573255 - 3573291
Alignment:
Q  124 atacccgtgttttgaaatcgagaaaaacccaaactca 160  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  3573255 atacccgtgtcttgaaatcgaggaaaacccaaactca 3573291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 35167299 - 35167363
Alignment:
Q  127 cccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacct 191  Q
    ||||||||||||||||    |||||| ||| |||||| |||||||||||||| | ||||||||||    
T  35167299 cccgtgttttgaaatcatagaaaaccgaaattcatattcaaacccaatcaaaacagggaaaacct 35167363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0531 (Bit Score: 96; Significance: 9e-47; HSPs: 1)
Name: scaffold0531
Description:

Target: scaffold0531; HSP #1
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 462 - 617
Target Start/End: Complemental strand, 2652 - 2497
Alignment:
Q  462 cagtctttgacttctttaatgcacttggcactattgcttttgcctatgctggacacaatgtggtgttagagatccaagcaacaattccgtcgacaccgga 561  Q
    |||||||| | |||||||||||||||||| |||| || ||||||||||| ||||||||||||||  | ||||||||||||||||||||||| ||||| ||    
T  2652 cagtctttaatttctttaatgcacttggctctatcgcgtttgcctatgccggacacaatgtggtactggagatccaagcaacaattccgtctacacctga 2553  T
Q  562 gaaaccatccaaggttccaatgtggagaggagttgttgttgcatacattgttgttg 617  Q
    ||||||||| |||| ||||||||||||||| ||||||||||| |||||||||||||    
T  2552 gaaaccatctaagggtccaatgtggagaggtgttgttgttgcctacattgttgttg 2497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 79; Significance: 1e-36; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 12 - 250
Target Start/End: Complemental strand, 30481574 - 30481330
Alignment:
Q  12 agagagaacttagagaagtgagtgccgtctaaaaggaataatgaattgattttttacattcaagacgggtttgggtataggttcagggtggatactttat 111  Q
    |||||||||||||||||||||||| |||||||||| |||| | |||| |||||||||||||  |||| |||||||||| ||||| |||||| ||| | ||    
T  30481574 agagagaacttagagaagtgagtgtcgtctaaaagaaatagtaaattaattttttacattcgggacgagtttgggtatgggttcggggtgggtacct-at 30481476  T
Q  112 atcccccttcc------catacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgt 205  Q
    |||| | || |      ||||| ||| ||||||||||  ||||||||||||||||||  |||||||||||||| | ||||||| |  ||||||| ||| |    
T  30481475 atcctcattactcgtctcatactcgtattttgaaatcaggaaaaacccaaactcatactcaaacccaatcaaaacagggaaaatccatcaatttaggttt 30481376  T
Q  206 agttcgggcggttaccca-caggtatgagctttgttgccatgtcta 250  Q
     ||||||||| |||||||  ||||| ||||||||||||||||||||    
T  30481375 ggttcgggcgattacccatgaggtaagagctttgttgccatgtcta 30481330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 120 - 250
Target Start/End: Complemental strand, 5858692 - 5858562
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    ||||||||||||||||| |||||| ||||||||||||| |||| ||||||||||||||| ||||||||||| ||||| |||| | | |||||||  | ||    
T  5858692 tcccatacccgtgtttttaaatcgggaaaaacccaaacccatacccaaacccaatcaaaacggggaaaacccgtcaaattggatttggttcgggtaggta 5858593  T
Q  220 cccacaggtatgagctttgttgccatgtcta 250  Q
     |||||||||||   ||||||||||||||||    
T  5858592 accacaggtatggattttgttgccatgtcta 5858562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 120 - 251
Target Start/End: Original strand, 27932461 - 27932593
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggc-ggtt 218  Q
    |||||||||||||||||||||||| | |||||||| || |||| ||||||||| ||||| ||||||||||| ||||| |||||| | |||||||| |||     
T  27932461 tcccatacccgtgttttgaaatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgggcgggta 27932560  T
Q  219 acccacaggtatgagctttgttgccatgtctaa 251  Q
    |||| | |||||||| ||||||| |||| ||||    
T  27932561 acccgcgggtatgagttttgttgtcatgcctaa 27932593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 120 - 246
Target Start/End: Complemental strand, 43113666 - 43113540
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    |||||| ||||||||||||||||| ||||||||||| ||||||  |||||||| ||||||| ||||||||| || || |||||| | ||||||| || ||    
T  43113666 tcccatgcccgtgttttgaaatcgggaaaaacccaatctcatacgcaaacccagtcaaagcagggaaaacccgttaaattgggtttggttcgggtgggta 43113567  T
Q  220 cccacaggtatgagctttgttgccatg 246  Q
     |||| |||||||| ||| ||||||||    
T  43113566 accacgggtatgagttttattgccatg 43113540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 61 - 246
Target Start/End: Original strand, 32303045 - 32303235
Alignment:
Q  61 ttttttacattcaagacgggtttgggtataggttcagggtggatactt-tatatcc----cccttcccatacccgtgttttgaaatcgagaaaaacccaa 155  Q
    |||||||||||   ||||||||||||||| ||||| |||||| ||| | |||| ||    ||| |||||||||||||||| || |||| | ||||||||     
T  32303045 ttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccat 32303144  T
Q  156 actcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttacccacaggtatgagctttgttgccatg 246  Q
    || |||| ||||||||| ||||| ||||||||||| ||||| |||||| |  ||||||||| || |||| |||||| | ||||||||||||    
T  32303145 acccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttgtttcgggcgggtaaccacgggtatgggttttgttgccatg 32303235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 124 - 203
Target Start/End: Original strand, 14155584 - 14155663
Alignment:
Q  124 atacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 203  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||||| ||| | ||||||||||| ||||| ||||||    
T  14155584 atacccgtgttttgaaatcgggaaaaacccaaactcatacccaaacccagtcataccggggaaaacccgtcaaattgggt 14155663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 120 - 246
Target Start/End: Original strand, 20399640 - 20399766
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    ||||||||||||||||||||||||   ||||||||||| |||| ||||||||| ||||| ||||||||||  ||||| |||||| | ||||| |||| ||    
T  20399640 tcccatacccgtgttttgaaatcggagaaaacccaaacccatacccaaacccagtcaaaacggggaaaactcgtcaaattgggtttggttcgagcgggta 20399739  T
Q  220 cccacaggtatgagctttgttgccatg 246  Q
     |||| |||||  | ||||||||||||    
T  20399740 accacgggtattggttttgttgccatg 20399766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 120 - 251
Target Start/End: Original strand, 1063555 - 1063692
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaa------tcaaagcggggaaaacctgtcaatttgggtgtagttcggg 213  Q
    |||||||||||||||||||||||| |||||||||| || |||| ||| |||||       ||||| ||||||||||| ||||| | |||| | |||||||    
T  1063555 tcccatacccgtgttttgaaatcgggaaaaacccatacccatacccacacccacacccagtcaaaacggggaaaacccgtcaaatcgggtttggttcggg 1063654  T
Q  214 cggttacccacaggtatgagctttgttgccatgtctaa 251  Q
    ||| || |||| |||||||| |||||||||||| ||||    
T  1063655 cgggtaaccacgggtatgagttttgttgccatgcctaa 1063692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 121 - 251
Target Start/End: Complemental strand, 2075873 - 2075743
Alignment:
Q  121 cccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttac 220  Q
    ||||||||| |||||||| |||| |||||||||| || |||| ||||||||| ||||| ||| ||||| | ||||| |||||| | |||| ||||| ||     
T  2075873 cccatacccatgttttgagatcgggaaaaacccatacccatacccaaacccagtcaaaacggagaaaatccgtcaaattgggtttggttcaggcgggtaa 2075774  T
Q  221 ccacaggtatgagctttgttgccatgtctaa 251  Q
    |||| | |||||| |||||||||||| ||||    
T  2075773 ccacggatatgagttttgttgccatgcctaa 2075743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 55 - 157
Target Start/End: Original strand, 14186298 - 14186405
Alignment:
Q  55 aattgattttttacattcaagacgggtttgggtataggttcagggtggatactt-tatatcc----cccttcccatacccgtgttttgaaatcgagaaaa 149  Q
    |||| ||||| |||||||| ||||||||||||||| |||||||||||  ||| | |||||||    ||| ||||||||||||||||||||||||||||||    
T  14186298 aattaattttctacattcaggacgggtttgggtatgggttcagggtgagtacctatatatccgttacccatcccatacccgtgttttgaaatcgagaaaa 14186397  T
Q  150 acccaaac 157  Q
    || |||||    
T  14186398 actcaaac 14186405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 56 - 203
Target Start/End: Original strand, 14687378 - 14687530
Alignment:
Q  56 attgattttttacattcaagacgggtttgggtataggttcagggtggatactttatatccccctt------cccatacccgtgttttgaaatcgagaaaa 149  Q
    |||||||||  ||||||| |||| |||||||||| ||||| |||||||||| | |||||||  ||      |||||||| |||||||||||||| | |||    
T  14687378 attgattttccacattcaggacgagtttgggtatgggttcggggtggatacat-atatccctgtttctcgtcccatacctgtgttttgaaatcggggaaa 14687476  T
Q  150 acccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 203  Q
    |||||||  |||| |||||||||||||||| |||||||||| | ||| ||||||    
T  14687477 acccaaatccatacccaaacccaatcaaagtggggaaaacccgccaaattgggt 14687530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 120 - 250
Target Start/End: Complemental strand, 29108862 - 29108732
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    |||||||||| |||||| |||||| |||||||||| || |||| ||||||||| ||||| ||||||||||| ||||| |||||| | |||||| ||  ||    
T  29108862 tcccatacccatgttttaaaatcgggaaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcggacgagta 29108763  T
Q  220 cccacaggtatgagctttgttgccatgtcta 250  Q
     || ||| |||| | |||| |||||||||||    
T  29108762 accgcagttatgggttttgctgccatgtcta 29108732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 61 - 246
Target Start/End: Original strand, 24927933 - 24928123
Alignment:
Q  61 ttttttacattcaagacgggtttgggtataggttcagggtggatactt-tatatcc----cccttcccatacccgtgttttgaaatcgagaaaaacccaa 155  Q
    |||||||||||   ||||||||||||||| ||||| |||||| ||| | |||| ||    ||| || ||||||||||||| || |||  | ||||||||     
T  24927933 ttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtctcatacccgtgtttcgagatcagggaaaacccat 24928032  T
Q  156 actcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttacccacaggtatgagctttgttgccatg 246  Q
    || |||| ||||||||| ||||| ||||||||||| ||||| |||||| | |||||||||| || || | |||||| | ||||||||||||    
T  24928033 acccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgggcgggtaaccgcgggtatgggttttgttgccatg 24928123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 120 - 188
Target Start/End: Complemental strand, 39445616 - 39445548
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaa 188  Q
    |||||||||||||||||||||||| |||||||||| || |||| ||||||| | ||||| |||||||||    
T  39445616 tcccatacccgtgttttgaaatcgggaaaaacccatacccatacccaaacctagtcaaaacggggaaaa 39445548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 190
Target Start/End: Complemental strand, 32392426 - 32392356
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacc 190  Q
    |||||||| ||||||||||||||||||||||||||||  |||| | ||||||| | |||||||| ||||||    
T  32392426 tcccatactcgtgttttgaaatcgagaaaaacccaaatccataccaaaacccatttaaagcgggaaaaacc 32392356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 190
Target Start/End: Complemental strand, 37961002 - 37960932
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacc 190  Q
    ||||||||||||||||| |||||| | |||||||||||||||| ||||||| | ||||| |||| ||||||    
T  37961002 tcccatacccgtgtttttaaatcggggaaaacccaaactcatacccaaacctagtcaaaacgggaaaaacc 37960932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 27056595 - 27056519
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 196  Q
    ||||||||| ||  |||||||||| ||||||||||||| |||| |||||||||  ||||||| |||||||| |||||    
T  27056595 tcccatacctgtactttgaaatcgggaaaaacccaaacccataaccaaacccagccaaagcgaggaaaacccgtcaa 27056519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 27777238 - 27777162
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 196  Q
    |||| |||| |||||||||||||| ||||||| ||||| |||| ||||||||| ||||| ||| ||||||| |||||    
T  27777238 tcccgtacctgtgttttgaaatcgggaaaaactcaaacacatacccaaacccagtcaaaacggagaaaacccgtcaa 27777162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 123 - 203
Target Start/End: Original strand, 35215587 - 35215666
Alignment:
Q  123 catacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 203  Q
    ||||||||||||||||||||| | |||||||||| ||||| ||||||||  ||||| |||| |||||| ||||| ||||||    
T  35215587 catacccgtgttttgaaatcg-ggaaaacccaaaatcatacccaaacccggtcaaaacgggaaaaaccggtcaaattgggt 35215666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 120 - 203
Target Start/End: Original strand, 1012667 - 1012749
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 203  Q
    |||||||| | |||||| |||||| | |||||||||||||||| |||||| |||||||| || |||||||| ||||| ||||||    
T  1012667 tcccatactcatgtttt-aaatcggggaaaacccaaactcatacccaaactcaatcaaaacgaggaaaacccgtcaaattgggt 1012749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 127 - 196
Target Start/End: Original strand, 10297513 - 10297582
Alignment:
Q  127 cccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 196  Q
    ||||| ||||||||||| | |||||||||| ||| ||||||||||||| ||| | ||||||||| |||||    
T  10297513 cccgtattttgaaatcggggaaaacccaaattcacatccaaacccaataaaatcagggaaaacccgtcaa 10297582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 17220760 - 17220841
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgg 201  Q
    |||||||||||||||||||||||| | |||| ||| || |||| |||||| || |||||  |||||||||| ||||| ||||    
T  17220760 tcccatacccgtgttttgaaatcggggaaaatccatacccatacccaaactcagtcaaaatggggaaaacccgtcaaattgg 17220841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 122 - 246
Target Start/End: Original strand, 34777116 - 34777234
Alignment:
Q  122 ccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttacc 221  Q
    ||||||||||||||||| |||| |||||||||| ||      ||||||||| ||||| |||| |||||| || || |||||| | |||||| ||| ||      
T  34777116 ccatacccgtgttttgagatcgggaaaaacccatac------ccaaacccagtcaaaacgggaaaaacccgttaaattgggtttggttcggacgggtaat 34777209  T
Q  222 cacaggtatgagctttgttgccatg 246  Q
    ||| |||||||| ||||||||||||    
T  34777210 cacgggtatgagttttgttgccatg 34777234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 15068628 - 15068552
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 196  Q
    |||| ||||||| ||||||||||| | ||||||| ||| |||| ||| ||||| ||||| ||||||||||| |||||    
T  15068628 tcccgtacccgtattttgaaatcggggaaaacccgaacccatacccagacccagtcaaatcggggaaaacccgtcaa 15068552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 15173920 - 15173844
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 196  Q
    |||| ||||||| ||||||||||| ||||||| ||||| |||| ||||||||| ||||| | | ||||||| |||||    
T  15173920 tcccgtacccgtattttgaaatcgggaaaaactcaaacacatacccaaacccagtcaaatcagagaaaacccgtcaa 15173844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 166 - 250
Target Start/End: Complemental strand, 17084107 - 17084023
Alignment:
Q  166 aaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttacccacaggtatgagctttgttgccatgtcta 250  Q
    ||||||| ||||||||||||||||| ||||| |||  | | ||||||| || |||||||| ||||| | ||||||| ||||||||    
T  17084107 aaacccagtcaaagcggggaaaacccgtcaacttgaatttggttcgggtgggtacccacaagtatgggttttgttgtcatgtcta 17084023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 24568986 - 24569061
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 196  Q
    |||||||||| |||| |||||||| |||||| ||| || |||| | ||||||||||||| ||||||||||| |||||    
T  24568986 tcccatacccatgttgtgaaatcgggaaaaatccatacccatacctaaacccaatcaaa-cggggaaaacccgtcaa 24569061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 33631897 - 33631821
Alignment:
Q  174 tcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttacccacaggtatgagctttgttgccatgtcta 250  Q
    |||||||||| |||||| |||||||| | | | ||||||| |  ||||||| |||||| ||||||||||||||||||    
T  33631897 tcaaagcgggaaaaacccgtcaatttagatttggttcgggtgcgtacccacgggtatgggctttgttgccatgtcta 33631821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 123 - 203
Target Start/End: Complemental strand, 40248408 - 40248328
Alignment:
Q  123 catacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 203  Q
    ||||||||||||||||||||| | |||||  | || |||| ||||||||| ||||| |||| |||||| ||||| ||||||    
T  40248408 catacccgtgttttgaaatcggggaaaacatatacccatacccaaacccagtcaaaacgggaaaaacccgtcaaattgggt 40248328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 189
Target Start/End: Original strand, 29918665 - 29918724
Alignment:
Q  130 gtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaac 189  Q
    |||||||||||||| ||||||| |||||||||| ||||| ||| ||||||| || |||||    
T  29918665 gtgttttgaaatcgggaaaaactcaaactcatacccaaaaccagtcaaagcaggaaaaac 29918724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 122 - 200
Target Start/End: Complemental strand, 8545387 - 8545310
Alignment:
Q  122 ccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttg 200  Q
    ||||||||||||||||||||||   |||||||||||| ||| |||| || | | ||||||| ||||||| |||||||||    
T  8545387 ccatacccgtgttttgaaatcggagaaaacccaaacttatacccaatccaagttaaagcggagaaaacc-gtcaatttg 8545310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 157
Target Start/End: Complemental strand, 9642391 - 9642354
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaac 157  Q
    |||||||||||||||||||||||| | |||||||||||    
T  9642391 tcccatacccgtgttttgaaatcggggaaaacccaaac 9642354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 157
Target Start/End: Original strand, 17469303 - 17469340
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaac 157  Q
    |||||||||||||||||||||||| | |||||||||||    
T  17469303 tcccatacccgtgttttgaaatcggggaaaacccaaac 17469340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 190
Target Start/End: Original strand, 24189561 - 24189626
Alignment:
Q  125 tacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacc 190  Q
    |||||||||||| ||||| | || ||||||| | |||| ||||| |||||||||||||| ||||||    
T  24189561 tacccgtgttttaaaatcaaaaataacccaatcacatacccaaatccaatcaaagcgggaaaaacc 24189626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 222
Target Start/End: Complemental strand, 29416217 - 29416125
Alignment:
Q  129 cgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttaccc 222  Q
    |||||||| |||| ||||||||  |||||||||| |||||| || ||||| ||||||||||| ||||| |||| | | ||||||| || |||||    
T  29416217 cgtgtttt-aaatagagaaaaagtcaaactcatacccaaactcagtcaaaacggggaaaacccgtcaaattggatttggttcgggtgggtaccc 29416125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 45236113 - 45236194
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgg 201  Q
    |||||||||||||||||||||||  | ||||| || || ||||  ||||| || ||||| ||||||||||| ||||| ||||    
T  45236113 tcccatacccgtgttttgaaatcagggaaaactcatacccatactcaaactcagtcaaaacggggaaaacccgtcaaattgg 45236194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 1e-33; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 75 - 252
Target Start/End: Original strand, 37349127 - 37349298
Alignment:
Q  75 gacgggtttgggtataggttcagggtggatactttatatcccccttcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaat 174  Q
    ||||||||||||||| |||||||||||||||| | |||| ||| ||     |||||||||||||||||| | ||||| |||||||||| ||||||||| |    
T  37349127 gacgggtttgggtatgggttcagggtggatacct-atatacccatt-----acccgtgttttgaaatcggggaaaactcaaactcatacccaaacccagt 37349220  T
Q  175 caaagcggggaaaacctgtcaatttgggtgtagttcgggcggttacccacaggtatgagctttgttgccatgtctaag 252  Q
    |||| ||||||||||||||||| |||||| | |||||||||| || |||| |||||| | |||||||||||| |||||    
T  37349221 caaaacggggaaaacctgtcaaattgggtttggttcgggcgggtaaccacgggtatgggttttgttgccatgcctaag 37349298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 55 - 199
Target Start/End: Complemental strand, 12505641 - 12505502
Alignment:
Q  55 aattgattttttacattcaagacgggtttgggtataggttcagggtggatactttatatcccccttcccatacccgtgttttgaaatcgagaaaaaccca 154  Q
    ||||||| |||||| |||| |||||||||||||||  ||||||||||| ||||  |||||||| ||     |||||||||||||||||| | ||||||||    
T  12505641 aattgatgttttaccttcaggacgggtttgggtatgagttcagggtgggtacta-atatccccatt-----acccgtgttttgaaatcggggaaaaccca 12505548  T
Q  155 aactcatatcc-aaacccaatcaaagcggggaaaacctgtcaattt 199  Q
    |||||||| || ||||||||||||||||| ||||||| ||||||||    
T  12505547 aactcataccctaaacccaatcaaagcggagaaaacccgtcaattt 12505502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 55 - 216
Target Start/End: Complemental strand, 19883167 - 19883001
Alignment:
Q  55 aattgattttttacattcaagacgggtttgggtataggttcagggtggatactttatatcccc------cttcccatacccgtgttttgaaatcgagaaa 148  Q
    |||||||||| |||||||  |||| ||||| |||| ||||| |||||||||| | ||||||||      |||||| || ||||||||| |||||| | ||    
T  19883167 aattgattttatacattcgggacgagtttgtgtatcggttcggggtggatacct-atatccccgttacccttcccgtatccgtgttttaaaatcggggaa 19883069  T
Q  149 aacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcgg 216  Q
    ||||||||||||||  ||||||||||||||||||| |||||| ||||| |||||| | ||||||||||    
T  19883068 aacccaaactcatactcaaacccaatcaaagcgggaaaaacccgtcaaattgggtttggttcgggcgg 19883001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 120 - 251
Target Start/End: Complemental strand, 4741257 - 4741127
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    |||||||||| |||||| |||||||| ||||| ||||||||||||||||| || ||||| |||||||||| |||||||||  || | |||||| ||| ||    
T  4741257 tcccatacccatgttttaaaatcgaggaaaactcaaactcatatccaaactcagtcaaa-cggggaaaacttgtcaatttatgtttggttcggacggata 4741159  T
Q  220 cccacaggtatgagctttgttgccatgtctaa 251  Q
    ||| || ||||||| ||||||| |||||||||    
T  4741158 cccgcatgtatgagttttgttgtcatgtctaa 4741127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 61 - 246
Target Start/End: Complemental strand, 6382377 - 6382187
Alignment:
Q  61 ttttttacattcaagacgggtttgggtataggttcagggtggatactt-tatatcc----cccttcccatacccgtgttttgaaatcgagaaaaacccaa 155  Q
    |||||||||||   ||||||||||||||| ||||| |||||| ||| | |||| ||    ||| ||||||||||||||||||| ||||   ||||||||     
T  6382377 ttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatcggagaaaacccat 6382278  T
Q  156 actcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttacccacaggtatgagctttgttgccatg 246  Q
    || |||| ||||||||| ||||||||||||||||| ||||| |||||| |  ||||||||| || |||| |||||| | ||| ||||||||    
T  6382277 acccatacccaaacccagtcaaagcggggaaaacccgtcaaattgggtttgattcgggcgggtaaccacgggtatgggttttattgccatg 6382187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 61 - 250
Target Start/End: Original strand, 7608960 - 7609154
Alignment:
Q  61 ttttttacattcaagacgggtttgggtataggttcagggtggatactt-tatatcc----cccttcccatacccgtgttttgaaatcgagaaaaacccaa 155  Q
    |||||||||||   ||||||||||||||| ||||| |||||| ||| | |||| ||    ||| |||||||||||||||| || |||| | ||||||||     
T  7608960 ttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccat 7609059  T
Q  156 actcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttacccacaggtatgagctttgttgccatgtcta 250  Q
    || |||| ||||| ||| ||||| ||||||||||| ||||| |||||| ||||||||| || || ||||  ||||| | ||||||||||||||||    
T  7609060 acccatacccaaatccagtcaaaacggggaaaacccgtcaaattgggtttagttcgggtgggtaaccacgagtatgggttttgttgccatgtcta 7609154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 43309537 - 43309613
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 196  Q
    |||||||||||||||||||||||| ||||||||||||||||||  |||||||| ||||||||| ||||||| |||||    
T  43309537 tcccatacccgtgttttgaaatcgggaaaaacccaaactcatactcaaacccagtcaaagcggagaaaacccgtcaa 43309613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 120 - 251
Target Start/End: Complemental strand, 31918599 - 31918468
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    |||||||||||||||| || |||| | |||||||| ||||||| ||||||||| ||||| ||||||||||| ||||| |||||| | |||||||| | ||    
T  31918599 tcccatacccgtgtttcgagatcggggaaaacccatactcatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgggcaggta 31918500  T
Q  220 cccacaggtatgagctttgttgccatgtctaa 251  Q
     |||| | |||| | |||||||||||| ||||    
T  31918499 accacggatatgggttttgttgccatgcctaa 31918468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 128 - 253
Target Start/End: Complemental strand, 7334230 - 7334105
Alignment:
Q  128 ccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttacccacagg 227  Q
    |||||||||||||||| | |||| |||||  |||| ||||||||| |||||||||| |||||| ||||| || ||| | |||| ||||| ||||| || |    
T  7334230 ccgtgttttgaaatcggggaaaatccaaatccatacccaaacccagtcaaagcgggaaaaacccgtcaaattaggtttggttcaggcggatacccgcaag 7334131  T
Q  228 tatgagctttgttgccatgtctaaga 253  Q
    |||| | |||||||||||| ||||||    
T  7334130 tatgggttttgttgccatgcctaaga 7334105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 122 - 246
Target Start/End: Complemental strand, 1724308 - 1724185
Alignment:
Q  122 ccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttacc 221  Q
    |||||||| ||||||||||||| ||||||||||||| |||| ||||||||| ||||| ||||||||||  ||||| ||| || | ||||||| || ||      
T  1724308 ccatacccatgttttgaaatcgggaaaaacccaaacccatacccaaacccagtcaaa-cggggaaaacacgtcaaattgagtttggttcgggtgggtaaa 1724210  T
Q  222 cacaggtatgagctttgttgccatg 246  Q
    ||| |||||||| |||||| |||||    
T  1724209 cacgggtatgagttttgttaccatg 1724185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 251
Target Start/End: Original strand, 11028127 - 11028258
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    ||||||||||||||||||| |||| | |||||||| || |||| ||||| ||| ||||| ||| ||||||| ||||| |||||| | ||||||| || ||    
T  11028127 tcccatacccgtgttttgagatcggggaaaacccatacccatacccaaatccagtcaaaacggagaaaacccgtcaaattgggtttggttcgggtgggta 11028226  T
Q  220 cccacaggtatgagctttgttgccatgtctaa 251  Q
     ||||  ||||| | |||||||||||| ||||    
T  11028227 accacgtgtatgggttttgttgccatgcctaa 11028258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 246
Target Start/End: Original strand, 31752513 - 31752636
Alignment:
Q  123 catacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttaccc 222  Q
    ||||||||||||||||||||| | |||||||| || |||||||||||||||||||| |||  |||||| ||||| |||| | |  ||||||||| || ||    
T  31752513 catacccgtgttttgaaatcggggaaaacccatacccatatccaaacccaatcaaaacggtaaaaacccgtcaaattggatttgattcgggcgggtaacc 31752612  T
Q  223 acaggtatgagctttgttgccatg 246  Q
     | |||||| | ||||||| ||||    
T  31752613 gcgggtatgggttttgttgtcatg 31752636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 120 - 190
Target Start/End: Complemental strand, 4737943 - 4737873
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacc 190  Q
    |||||||||| |||||| |||||||| ||||||||||||||||| |||||| | |||||| ||||||||||    
T  4737943 tcccatacccatgttttaaaatcgaggaaaacccaaactcatattcaaaccaagtcaaaggggggaaaacc 4737873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 120 - 250
Target Start/End: Complemental strand, 19548978 - 19548849
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    |||| |||| |||||||||||||| | |||||||  |  |||| ||||||||| |||||| |||||||||| ||||| |||||| | |||||||  | ||    
T  19548978 tcccgtacctgtgttttgaaatcggggaaaacccttatccatacccaaacccagtcaaagaggggaaaacc-gtcaaattgggtttggttcgggtaggta 19548880  T
Q  220 cccacaggtatgagctttgttgccatgtcta 250  Q
    |||| ||||||||| ||||||| ||||||||    
T  19548879 cccataggtatgagttttgttgtcatgtcta 19548849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 120 - 190
Target Start/End: Original strand, 25941192 - 25941262
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacc 190  Q
    |||| ||||||||||||||||||| ||||||||||||| |||  ||||||| |||||||| ||||||||||    
T  25941192 tcccgtacccgtgttttgaaatcgggaaaaacccaaacacatgcccaaaccaaatcaaagtggggaaaacc 25941262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 120 - 246
Target Start/End: Original strand, 43893282 - 43893407
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    |||||||||||||||| || |||| | ||| |||| || |||| ||||||||| ||||| ||||||||||| ||||| |||||| | | |||||||| ||    
T  43893282 tcccatacccgtgtttcgagatcggggaaa-cccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggctcgggcgggta 43893380  T
Q  220 cccacaggtatgagctttgttgccatg 246  Q
     |||| |||||| | ||||||||||||    
T  43893381 accacgggtatgggttttgttgccatg 43893407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 61 - 243
Target Start/End: Original strand, 44317525 - 44317712
Alignment:
Q  61 ttttttacattcaagacgggtttgggtataggttcagggtggatactt-tatatcc----cccttcccatacccgtgttttgaaatcgagaaaaacccaa 155  Q
    |||||||||||   ||||||||||||||| ||||| |||||| ||| | |||| ||    ||| |||||||||||||||| || |||| | ||||||||     
T  44317525 ttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccat 44317624  T
Q  156 actcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttacccacaggtatgagctttgttgcc 243  Q
    || |||| ||||||||| ||||| ||||||||| | ||||| |||||| |  ||||||||  || |||| |||||| | |||||||||    
T  44317625 acccatacccaaacccagtcaaaacggggaaaatccgtcaaattgggtttgattcgggcgagtaaccacgggtatgggttttgttgcc 44317712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 120 - 246
Target Start/End: Complemental strand, 55826664 - 55826538
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    ||||||||| |||||| || |||| | |||||||| ||||||||||||||||| ||||| | ||||||| | ||||| |||| | | |||||| ||| ||    
T  55826664 tcccatacctgtgtttcgagatcggggaaaacccatactcatatccaaacccagtcaaaacagggaaaatccgtcaaattggatttggttcggacgggta 55826565  T
Q  220 cccacaggtatgagctttgttgccatg 246  Q
     |||| |||||| | ||||||||||||    
T  55826564 accacgggtatgggttttgttgccatg 55826538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 79 - 160
Target Start/End: Complemental strand, 12825548 - 12825462
Alignment:
Q  79 ggtttgggtataggttcagggtggatactt-tatatcc----cccttcccatacccgtgttttgaaatcgagaaaaacccaaactca 160  Q
    |||||||||||||||||||||||| ||| | |||||||    ||| |||||||||||||||||||||||| | ||||||||||||||    
T  12825548 ggtttgggtataggttcagggtgggtacgtatatatccgttacccgtcccatacccgtgttttgaaatcggggaaaacccaaactca 12825462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 120 - 251
Target Start/End: Complemental strand, 7985166 - 7985036
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    |||||||||| |||||||||||||   |||| ||||||| ||| ||||||||||||||| |  |||||||| ||||| |||||| | |||| ||||| ||    
T  7985166 tcccatacccatgttttgaaatcggagaaaatccaaacttatacccaaacccaatcaaaaccaggaaaacccgtcaaattgggtttggttcaggcggata 7985067  T
Q  220 cccacaggtatgagctttgttgccatgtctaa 251  Q
     |||||  |||||| ||||||| |||| ||||    
T  7985066 accaca-atatgagttttgttgacatgcctaa 7985036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 120 - 251
Target Start/End: Original strand, 26564885 - 26565016
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    ||||||||||| |||||||||||| | ||| | |||||||||| ||||||||| ||||| ||  ||||| | ||||| |||| | | ||||||| || ||    
T  26564885 tcccatacccgcgttttgaaatcggggaaagctcaaactcatacccaaacccagtcaaaacgaagaaaatccgtcaaattggatttggttcgggtgggta 26564984  T
Q  220 cccacaggtatgagctttgttgccatgtctaa 251  Q
     |||| |||||| | |||||||||||| ||||    
T  26564985 accacgggtatgggttttgttgccatgcctaa 26565016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 120 - 203
Target Start/End: Original strand, 43553500 - 43553583
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 203  Q
    ||||||||||||||||||||||||| ||||| | |||  |||| |||||| || ||||||||| ||||||| ||||| ||||||    
T  43553500 tcccatacccgtgttttgaaatcgaaaaaaatcgaaatgcatacccaaactcagtcaaagcggagaaaacccgtcaaattgggt 43553583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 120 - 249
Target Start/End: Complemental strand, 6482076 - 6481947
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    ||||||||||||||||| |||| | | ||||||||||| |||| ||||||||||||||| | | ||||| | ||||| ||| || |  |||||| || ||    
T  6482076 tcccatacccgtgtttttaaattggggaaaacccaaacccatacccaaacccaatcaaaacagagaaaatccgtcaaattgagtttgattcgggtggata 6481977  T
Q  220 cccacaggtatgagctttgttgccatgtct 249  Q
     |||| |||||  | |||||||||||||||    
T  6481976 accacgggtataggttttgttgccatgtct 6481947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 125 - 222
Target Start/End: Complemental strand, 21956850 - 21956753
Alignment:
Q  125 tacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttaccc 222  Q
    |||||||||||| ||||||  ||||||||||||||||| ||||| ||||| |||  ||| |||||||||||| || | | | |||||||||| |||||    
T  21956850 tacccgtgttttaaaatcggaaaaaacccaaactcatacccaaatccaattaaaatgggaaaaacctgtcaaatttgatttggttcgggcgggtaccc 21956753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 62 - 246
Target Start/End: Original strand, 32585480 - 32585663
Alignment:
Q  62 tttttacattcaagacgggtttgggtataggttcagggtggatactt-tatatcc----cccttcccatacccgtgttttgaaatcgagaaaaacccaaa 156  Q
    ||||||||||   ||||||||||||||| |||||||||||| ||| | |||| ||    ||  |||||||||||||||||||||||| || |||     |    
T  32585480 tttttacatttgggacgggtttgggtatgggttcagggtgggtacctatatacccgttacctgtcccatacccgtgttttgaaatcg-gagaaa-----a 32585573  T
Q  157 ctcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttacccacaggtatgagctttgttgccatg 246  Q
     ||||| ||||||||| |||||  |||||||||| ||||| |||||| | ||| |||||| || || | |||||||| ||||||||||||    
T  32585574 ttcatacccaaacccagtcaaaaaggggaaaaccggtcaaattgggtttggtttgggcggataaccgcgggtatgagttttgttgccatg 32585663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 56 - 108
Target Start/End: Complemental strand, 33516182 - 33516130
Alignment:
Q  56 attgattttttacattcaagacgggtttgggtataggttcagggtggatactt 108  Q
    ||||||||||||||||  |||||||||||||||||||||| |||||| |||||    
T  33516182 attgattttttacatttgagacgggtttgggtataggttcggggtgggtactt 33516130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 116 - 188
Target Start/End: Complemental strand, 41915041 - 41914969
Alignment:
Q  116 cccttcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaa 188  Q
    |||||||| ||||| | ||||||||||| | |||||||||||||||| || |||||| ||||| |||||||||    
T  41915041 cccttcccgtacccatattttgaaatcggggaaaacccaaactcatacccgaacccagtcaaatcggggaaaa 41914969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 123 - 190
Target Start/End: Original strand, 10302141 - 10302208
Alignment:
Q  123 catacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacc 190  Q
    |||||||||  |||||||||| | |||||| |||| |||| ||||||||||||||| |||||||||||    
T  10302141 catacccgtactttgaaatcggggaaaacctaaacccatacccaaacccaatcaaaacggggaaaacc 10302208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 120 - 251
Target Start/End: Complemental strand, 11122910 - 11122779
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    |||||||||||||||| || ||||   |||||||| || |||| |||||| || ||||| |||  |||| | ||||| ||| || | |||||||||| ||    
T  11122910 tcccatacccgtgtttcgagatcggagaaaacccatacccatacccaaactcagtcaaaacggaaaaaatccgtcaaattgagtttggttcgggcgggta 11122811  T
Q  220 cccacaggtatgagctttgttgccatgtctaa 251  Q
     |||| |||||||| |||||||||||| ||||    
T  11122810 accacgggtatgagttttgttgccatgcctaa 11122779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 123 - 246
Target Start/End: Original strand, 21423918 - 21424041
Alignment:
Q  123 catacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttaccc 222  Q
    ||||||||||||| || || | | |||||||| || |||| ||||||||| ||||| |||| |||| | ||||| |||| | | |||||||||| || ||    
T  21423918 catacccgtgtttcgagattggggaaaacccatacccatacccaaacccagtcaaaacgggaaaaatccgtcaaattggatttggttcgggcgggtaacc 21424017  T
Q  223 acaggtatgagctttgttgccatg 246  Q
    || |||||||| ||| ||||||||    
T  21424018 acgggtatgagttttattgccatg 21424041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 246
Target Start/End: Complemental strand, 5902719 - 5902535
Alignment:
Q  61 ttttttacattcaagacgggtttgggtataggttcagggtggatactt-tatatcc----cccttcccatacccgtgttttgaaatcgagaaaaacccaa 155  Q
    |||||||||||   ||||||||||||||| ||||| |||||| ||| | |||| ||    ||| |||||||||||||||| || |||| | ||||||||     
T  5902719 ttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccat 5902620  T
Q  156 actcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttacccacaggtatgagctttgttgccatg 246  Q
    ||      ||||||||| ||||| ||||||||||| ||||| ||| || | |||||||||| || |||| |||||  | ||||||||||||    
T  5902619 ac------ccaaacccagtcaaaacggggaaaacccgtcaaattgagtttggttcgggcgggtaaccacgggtataggttttgttgccatg 5902535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 75 - 213
Target Start/End: Complemental strand, 15987353 - 15987210
Alignment:
Q  75 gacgggtttgggtataggttcagggtggata-ctttatatcc----cccttcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaac 169  Q
    ||||||||||||||| ||||| |||||| || || |||| ||    ||| ||||||||||||||||| |||||  | ||||| || || |||| ||||||    
T  15987353 gacgggtttgggtatgggttcggggtgggtatctatatacccgttacccatcccatacccgtgttttaaaatctgggaaaactcatacccatacccaaac 15987254  T
Q  170 ccaatcaaagcggggaaaacctgtcaatttgggtgtagttcggg 213  Q
    |||||||||  || ||||||| ||||| |||||| | |||||||    
T  15987253 ccaatcaaaatggagaaaacccgtcaaattgggtttggttcggg 15987210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 125 - 182
Target Start/End: Complemental strand, 12075667 - 12075610
Alignment:
Q  125 tacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcgg 182  Q
    ||||||||||||||||| |  |||||| |||||||||| |||||||| ||||||||||    
T  12075667 tacccgtgttttgaaattggaaaaaactcaaactcatacccaaacccgatcaaagcgg 12075610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 30673015 - 30673091
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 196  Q
    |||| ||||||| |||| ||||||   |||| ||||||||||| ||||||||||||||| | ||||||||| |||||    
T  30673015 tcccgtacccgtattttaaaatcggagaaaatccaaactcatacccaaacccaatcaaatcagggaaaacccgtcaa 30673091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 37107465 - 37107540
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 196  Q
    |||||||||||||||||||||| | | ||||||||||||||||  |||||||| |||||  ||| |||||| |||||    
T  37107465 tcccatacccgtgttttgaaattg-ggaaaacccaaactcatacacaaacccagtcaaaatgggaaaaacccgtcaa 37107540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 188
Target Start/End: Complemental strand, 1866585 - 1866522
Alignment:
Q  125 tacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaa 188  Q
    ||||||| ||||||||||| |||||||||| ||||||| ||| ||| | ||||| |||||||||    
T  1866585 tacccgtattttgaaatcgggaaaaacccatactcatacccagacctagtcaaatcggggaaaa 1866522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 130 - 196
Target Start/End: Complemental strand, 8843836 - 8843770
Alignment:
Q  130 gtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 196  Q
    ||||||| |||||| ||||||  ||||| |||||||||||||| |||||||  |||||||| |||||    
T  8843836 gtgttttaaaatcgggaaaaattcaaacacatatccaaacccagtcaaagcacggaaaacccgtcaa 8843770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 130 - 196
Target Start/End: Complemental strand, 8856800 - 8856734
Alignment:
Q  130 gtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 196  Q
    ||||||| |||||| ||||||  ||||| |||||||||||||| |||||||  |||||||| |||||    
T  8856800 gtgttttaaaatcgggaaaaattcaaacacatatccaaacccagtcaaagcacggaaaacccgtcaa 8856734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 50 - 108
Target Start/End: Original strand, 16575091 - 16575149
Alignment:
Q  50 taatgaattgattttttacattcaagacgggtttgggtataggttcagggtggatactt 108  Q
    |||| |||| |||||||||||| |||||| |||||||||||||||| | |||| |||||    
T  16575091 taataaattaattttttacatttaagacgagtttgggtataggttcggagtgggtactt 16575149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 123 - 216
Target Start/End: Original strand, 36306842 - 36306935
Alignment:
Q  123 catacccgtgttttgaaatc-gagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcgg 216  Q
    |||||||||||||||||||| ||||||| || |||||||||  ||||| || | ||||  ||||||||||||| || ||||| | ||||||||||    
T  36306842 catacccgtgttttgaaatcggagaaaatccaaaactcatactcaaactcagtaaaagtagggaaaacctgtc-atgtgggtttggttcgggcgg 36306935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 126 - 188
Target Start/End: Original strand, 39086217 - 39086279
Alignment:
Q  126 acccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaa 188  Q
    |||| |||| ||||||||   ||||| |||||||||||||||||||||||||| ||| |||||    
T  39086217 acccatgttgtgaaatcggagaaaactcaaactcatatccaaacccaatcaaaacggagaaaa 39086279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 124 - 178
Target Start/End: Original strand, 39375336 - 39375390
Alignment:
Q  124 atacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaa 178  Q
    |||||||| ||||||||||| | |||| |||||||||||||||||| || |||||    
T  39375336 atacccgtattttgaaatcggggaaaagccaaactcatatccaaactcagtcaaa 39375390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 120 - 178
Target Start/End: Complemental strand, 47239426 - 47239368
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaa 178  Q
    ||||||||||||||||| ||||||  ||||| ||| || |||||||||| |||||||||    
T  47239426 tcccatacccgtgttttaaaatcggaaaaaatccatacccatatccaaatccaatcaaa 47239368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 120 - 246
Target Start/End: Complemental strand, 47550394 - 47550268
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    ||||||||||||||||||| |||| | ||||| || ||  ||| ||||||||| |||||  |||||||| | | ||| ||| || | |||||||||| ||    
T  47550394 tcccatacccgtgttttgagatcggggaaaactcatacctatacccaaacccagtcaaaatggggaaaatccgccaaattgagtttggttcgggcgggta 47550295  T
Q  220 cccacaggtatgagctttgttgccatg 246  Q
     ||||| ||||| | |||||| |||||    
T  47550294 accacatgtatgggttttgtttccatg 47550268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 189
Target Start/End: Original strand, 45065303 - 45065372
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaac 189  Q
    |||| ||||||| ||||||||||||| |||||| ||||  ||| ||||||||| |||||  |||||||||    
T  45065303 tcccgtacccgtattttgaaatcgaggaaaacctaaacctatacccaaacccagtcaaattggggaaaac 45065372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 69; Significance: 1e-30; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 495 - 595
Target Start/End: Original strand, 43854450 - 43854550
Alignment:
Q  495 ttgcttttgcctatgctggacacaatgtggtgttagagatccaagcaacaattccgtcgacaccggagaaaccatccaaggttccaatgtggagaggagt 594  Q
    |||| ||||||||||||||||||||||||||||| ||||| ||||||||||| || || ||||| |||||||||||||||| ||||||||||||||||||    
T  43854450 ttgcatttgcctatgctggacacaatgtggtgttggagattcaagcaacaatcccttccacaccagagaaaccatccaagggtccaatgtggagaggagt 43854549  T
Q  595 t 595  Q
    |    
T  43854550 t 43854550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 120 - 249
Target Start/End: Complemental strand, 24414172 - 24414043
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    ||||||||||||||||||| |||| | |||||| | || |||| ||||||||||||||| ||||||||||| ||||| |||||| | |||||||||| ||    
T  24414172 tcccatacccgtgttttgagatcggggaaaaccgatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattgggtttggttcgggcgggta 24414073  T
Q  220 cccacaggtatgagctttgttgccatgtct 249  Q
     ||||||||||| | |||||||||||||||    
T  24414072 accacaggtatgggttttgttgccatgtct 24414043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 455 - 617
Target Start/End: Complemental strand, 41381798 - 41381636
Alignment:
Q  455 gcaggaacagtctttgacttctttaatgcacttggcactattgcttttgcctatgctggacacaatgtggtgttagagatccaagcaacaattccgtcga 554  Q
    |||||| | |||||| | |||||||||||||||||  || |||||||||||||||| ||||||||||||||||| || || ||| | ||||| || || |    
T  41381798 gcaggatctgtctttaatttctttaatgcacttggttctgttgcttttgcctatgcaggacacaatgtggtgttggaaattcaatctacaatcccatcta 41381699  T
Q  555 caccggagaaaccatccaaggttccaatgtggagaggagttgttgttgcatacattgttgttg 617  Q
    |||| ||||||||||| |||| ||||||||||| ||||||| |  |||| ||||| |||||||    
T  41381698 cacctgagaaaccatctaagggtccaatgtggaaaggagttatctttgcctacatggttgttg 41381636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 75 - 251
Target Start/End: Original strand, 30846945 - 30847126
Alignment:
Q  75 gacgggtttgggtataggttcagggtggatactt-tatatcc----cccttcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaac 169  Q
    ||||||||||||||| ||||| |||||| ||| | |||| ||    ||| |||||||||||||||| || |||| | |||||||| || |||| ||||||    
T  30846945 gacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccatacccatacccaaac 30847044  T
Q  170 ccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttacccacaggtatgagctttgttgccatgtctaa 251  Q
    ||| ||||| ||||||||||| ||||| |||||| | |||||||||| || |||| |||||| | |||||||||||| ||||    
T  30847045 ccagtcaaaacggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacgggtatgggttttgttgccatgcctaa 30847126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 60 - 246
Target Start/End: Original strand, 10920629 - 10920813
Alignment:
Q  60 attttttacattcaagacgggtttgggtataggttcagggtggatactt-tatatcccccttcccatacccgtgttttgaaatcgagaaaaacccaaact 158  Q
    ||||||||||||   ||||| ||||||||| ||||| |||||||||| | |||||||    |||||||| |||||||||| ||||  ||||| ||| ||     
T  10920629 attttttacatttgggacggatttgggtatgggttcggggtggatacctatatatccg---tcccatactcgtgttttgagatcggaaaaaatccatacc 10920725  T
Q  159 catatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttacccacaggtatgagctttgttgccatg 246  Q
    |||| ||||||||| ||||| |||||||||||| |||| |||| | | |||||||||| || |||| |||||| | ||||||||||||    
T  10920726 catacccaaacccagtcaaaacggggaaaacctatcaaattggatttggttcgggcgggtaaccacgggtatgggttttgttgccatg 10920813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 120 - 241
Target Start/End: Original strand, 13830784 - 13830905
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    ||||||||||||||||||| |||||| |||||||| || |||| ||||||||| |||||  |||||||||| ||||| |||||| | |||||||||| ||    
T  13830784 tcccatacccgtgttttgagatcgaggaaaacccatacccatacccaaacccagtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggta 13830883  T
Q  220 cccacaggtatgagctttgttg 241  Q
     |||| |||||| | |||||||    
T  13830884 accacgggtatgggttttgttg 13830905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 120 - 252
Target Start/End: Original strand, 12341649 - 12341781
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    ||||||||| |||||||||||||| | |||||||| || |||| |||||| || ||||| ||||||||||| ||||| |||||| | |||||| ||| ||    
T  12341649 tcccatacctgtgttttgaaatcggggaaaacccatacccatacccaaactcagtcaaaacggggaaaacccgtcaaattgggtttggttcggacggata 12341748  T
Q  220 cccacaggtatgagctttgttgccatgtctaag 252  Q
     || | |||||||| |||||||||||| |||||    
T  12341749 accgcgggtatgagttttgttgccatgcctaag 12341781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 120 - 246
Target Start/End: Original strand, 37106741 - 37106867
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    |||||||||||||||||||||||| | |||||||| || |||| |||||| || ||||| ||||||||||| ||||| |||||| | |||||||||| ||    
T  37106741 tcccatacccgtgttttgaaatcggggaaaacccatacccatacccaaactcagtcaaaacggggaaaacccgtcaaattgggtttggttcgggcgggta 37106840  T
Q  220 cccacaggtatgagctttgttgccatg 246  Q
     || |  ||||||| ||||||| ||||    
T  37106841 accgcgagtatgagttttgttgtcatg 37106867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 120 - 250
Target Start/End: Complemental strand, 37472799 - 37472669
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    |||||||||||||||||||||||| | |||| ||| ||||||| ||||||||| ||||| ||||||||||| ||||| ||| || | |||||||||| ||    
T  37472799 tcccatacccgtgttttgaaatcggggaaaatccatactcatacccaaacccagtcaaaacggggaaaacccgtcaaattgagtttggttcgggcgggta 37472700  T
Q  220 cccacaggtatgagctttgttgccatgtcta 250  Q
     |  | |||||| | |||||| |||||||||    
T  37472699 actgcgggtatgggttttgttaccatgtcta 37472669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 61 - 246
Target Start/End: Original strand, 9632371 - 9632561
Alignment:
Q  61 ttttttacattcaagacgggtttgggtataggttcagggtggatactt-tatatcc----cccttcccatacccgtgttttgaaatcgagaaaaacccaa 155  Q
    |||||||||||   ||||||||||||||| ||||| |||||||||| | |||| ||    ||| |||||||||||||||| || |||| | ||||||||     
T  9632371 ttttttacatttgggacgggtttgggtatgggttcggggtggatacctatatacccattacccgtcccatacccgtgtttcgagatcggggaaaacccat 9632470  T
Q  156 actcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttacccacaggtatgagctttgttgccatg 246  Q
    || ||||  |||||||| ||||| |||| |||||| ||||| ||| || | |||||||||| || |||| |||||| | ||||||||||||    
T  9632471 acccatactcaaacccattcaaaacgggaaaaacccgtcaaattgagtttggttcgggcgggtaaccacgggtatgggttttgttgccatg 9632561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 241
Target Start/End: Complemental strand, 31942223 - 31942104
Alignment:
Q  123 catacccgtgtttt-gaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttacc 221  Q
    |||||||||||||| ||||||||| | ||||||||| |||||||||||||| |||||||||| ||||||  |||| ||| || | ||| |||||| || |    
T  31942223 catacccgtgtttttgaaatcgaggataacccaaacccatatccaaacccagtcaaagcgggaaaaacccatcaaattgagtttggtttgggcgggtaac 31942124  T
Q  222 cacaggtatgagctttgttg 241  Q
    ||| |||||| | |||||||    
T  31942123 cacgggtatgggttttgttg 31942104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 209
Target Start/End: Complemental strand, 34214697 - 34214609
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagtt 209  Q
    |||| ||||||||||||||||| ||||||||| ||||||||||   |||||||||||||||||  |||||| ||||| |||||| |||||    
T  34214697 tcccgtacccgtgttttgaaattgagaaaaactcaaactcatacaaaaacccaatcaaagcggaaaaaacc-gtcaaattgggtttagtt 34214609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 61 - 190
Target Start/End: Complemental strand, 35248489 - 35248355
Alignment:
Q  61 ttttttacattcaagacgggtttgggtataggttcagggtggatac-tttatatcc----cccttcccatacccgtgttttgaaatcgagaaaaacccaa 155  Q
    |||| |||||||| ||||||||||||||| ||||| |||||| ||| |||||  ||    ||| |||||||||||||||||| ||||| | |||||||||    
T  35248489 ttttctacattcaggacgggtttgggtatgggttcggggtgggtacctttatcccctttacccgtcccatacccgtgttttgtaatcgtggaaaacccaa 35248390  T
Q  156 actcatatccaaacccaatcaaagcggggaaaacc 190  Q
    || | || |||||| ||||||||| | ||||||||    
T  35248389 acccgtacccaaactcaatcaaagtgaggaaaacc 35248355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 249
Target Start/End: Complemental strand, 44746149 - 44746020
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    |||||||  ||||||||||||||| | ||||||||||  |||| |||||| |||||||| ||||||||||| ||||| |||||| | || |||| || ||    
T  44746149 tcccatattcgtgttttgaaatcggggaaaacccaaatccatacccaaactcaatcaaaacggggaaaacccgtcaaattgggtttggtacgggtgggta 44746050  T
Q  220 cccacaggtatgagctttgttgccatgtct 249  Q
     ||   | |||||| |||||||||||||||    
T  44746049 accgtggatatgagttttgttgccatgtct 44746020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 22900843 - 22900919
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 196  Q
    |||||||||||||||||||||||| ||||||||||||| |||| ||| ||| | |||||| | |||||||| |||||    
T  22900843 tcccatacccgtgttttgaaatcgggaaaaacccaaacccatacccagaccaagtcaaagtgaggaaaacccgtcaa 22900919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 120 - 219
Target Start/End: Complemental strand, 7314688 - 7314589
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    |||||||| ||| |||| |||||| | |||||||| || |||||||||||||| ||||| ||||||||| | ||||| ||| || | |||||||||||||    
T  7314688 tcccatactcgtattttaaaatcggggaaaacccatacccatatccaaacccagtcaaaacggggaaaatccgtcaaattgagtttggttcgggcggtta 7314589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 250
Target Start/End: Original strand, 15546793 - 15546923
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    |||||||||||||||||||||||| | ||||||||||| |||  ||| | ||| ||||||||||||||||  ||||| | |||   |||| |||||| ||    
T  15546793 tcccatacccgtgttttgaaatcggggaaaacccaaacccatgcccagatccagtcaaagcggggaaaactcgtcaaatgggggtgagtttgggcgggta 15546892  T
Q  220 cccacaggtatgagctttgttgccatgtcta 250  Q
    ||||  || ||| |  |||||||||||||||    
T  15546893 cccatggggatgggtattgttgccatgtcta 15546923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 120 - 245
Target Start/End: Complemental strand, 8915977 - 8915853
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    ||||||||||||||||||| |||||| |||||||| || ||||||||||| || ||||| |||| |||| | ||||| |||  | |  || |||||| ||    
T  8915977 tcccatacccgtgttttgagatcgag-aaaacccatacccatatccaaactcagtcaaaacgggaaaaatccgtcaaattgaatttgatttgggcggata 8915879  T
Q  220 cccacaggtatgagctttgttgccat 245  Q
     ||||||||||| | |||||||||||    
T  8915878 accacaggtatgggttttgttgccat 8915853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 125 - 178
Target Start/End: Original strand, 30978979 - 30979032
Alignment:
Q  125 tacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaa 178  Q
    ||||||| ||||||||||| ||||||||||||||||||| |||||||| |||||    
T  30978979 tacccgtattttgaaatcgggaaaaacccaaactcatattcaaacccagtcaaa 30979032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 128 - 252
Target Start/End: Original strand, 13954802 - 13954926
Alignment:
Q  128 ccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttacccacagg 227  Q
    ||||||||| |||||| | ||||  ||||| |||| ||||||||| ||||||||  ||||||||||||||||| || | ||| | |||| ||  | | ||    
T  13954802 ccgtgttttaaaatcggggaaaattcaaacacatacccaaacccagtcaaagcgtagaaaacctgtcaatttgcgtttggttagagcgggtattcgcggg 13954901  T
Q  228 tatgagctttgttgccatgtctaag 252  Q
    ||| || ||||||||||||||||||    
T  13954902 tattagttttgttgccatgtctaag 13954926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 128 - 252
Target Start/End: Original strand, 14096009 - 14096133
Alignment:
Q  128 ccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttacccacagg 227  Q
    ||||||||| |||||| | ||||  ||||| |||| ||||||||| ||||||||  ||||||||||||||||| || | ||| | |||| ||  | | ||    
T  14096009 ccgtgttttaaaatcggggaaaattcaaacacatacccaaacccagtcaaagcgtagaaaacctgtcaatttgcgtttggttagagcgggtattcgcggg 14096108  T
Q  228 tatgagctttgttgccatgtctaag 252  Q
    ||| || ||||||||||||||||||    
T  14096109 tattagttttgttgccatgtctaag 14096133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 124 - 188
Target Start/End: Complemental strand, 18106155 - 18106091
Alignment:
Q  124 atacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaa 188  Q
    ||||||||||||||| |||| | |||||||| || |||||||||||||| ||||| |||||||||    
T  18106155 atacccgtgttttgagatcggggaaaacccatacccatatccaaacccagtcaaaacggggaaaa 18106091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 19104870 - 19104794
Alignment:
Q  127 cccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 203  Q
    ||||||||| ||||||| | |||||||||||||||| ||||||||||||||| |||  ||||||  |||| ||||||    
T  19104870 cccgtgtttggaaatcggggaaaacccaaactcatacccaaacccaatcaaaacggaaaaaacccatcaaattgggt 19104794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 120 - 251
Target Start/End: Complemental strand, 10208470 - 10208340
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    ||||||||||||||||| | || | | |||||||| || |||| ||||||||| ||||| ||||||||||| ||||| ||   | | |||||||||| ||    
T  10208470 tcccatacccgtgttttaagattggggaaaacccatacccatacccaaacccagtcaaaacggggaaaacc-gtcaaattaactttggttcgggcggata 10208372  T
Q  220 cccacaggtatgagctttgttgccatgtctaa 251  Q
      ||| |||||||| |||||||||||| ||||    
T  10208371 atcacgggtatgagttttgttgccatgcctaa 10208340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 120 - 203
Target Start/End: Complemental strand, 12193867 - 12193784
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 203  Q
    ||||||||||||||| |||||||| ||||||| || ||||||| ||||||||| |||||   || |||||| ||||| ||||||    
T  12193867 tcccatacccgtgttctgaaatcgggaaaaacacatactcatacccaaacccagtcaaaatcggaaaaacccgtcaaattgggt 12193784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 164 - 246
Target Start/End: Complemental strand, 6027897 - 6027815
Alignment:
Q  164 ccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttacccacaggtatgagctttgttgccatg 246  Q
    ||||||||||||||| ||||||||||| ||||| |||||| | |||||||||| || ||||  ||||| | ||||||| ||||    
T  6027897 ccaaacccaatcaaaacggggaaaacccgtcaaattgggtttggttcgggcggataaccacgagtatgggttttgttgtcatg 6027815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 123 - 246
Target Start/End: Complemental strand, 13705398 - 13705269
Alignment:
Q  123 catacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaa------tcaaagcggggaaaacctgtcaatttgggtgtagttcgggcgg 216  Q
    ||||||||||||||||||||| | ||||| || || |||| ||| ||||||      ||||| ||||||||||| ||||| |||||| | |||||| |||    
T  13705398 catacccgtgttttgaaatcggggaaaactcatacccatacccatacccaaaccctgtcaaaacggggaaaacccgtcaaattgggtatggttcggacgg 13705299  T
Q  217 ttacccacaggtatgagctttgttgccatg 246  Q
     || |||  |||||||| ||||||||||||    
T  13705298 gtaaccatgggtatgagttttgttgccatg 13705269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 123 - 201
Target Start/End: Original strand, 45115610 - 45115690
Alignment:
Q  123 catacccgtgttttgaaatcgagaaaaaccc--aaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgg 201  Q
    ||||||||||||||||||||||| ||||| |  | || |||| ||||||||| ||||| ||||||||||| ||||| ||||    
T  45115610 catacccgtgttttgaaatcgaggaaaactcatatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgg 45115690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 123 - 188
Target Start/End: Original strand, 45256875 - 45256940
Alignment:
Q  123 catacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaa 188  Q
    ||||||||||||||||||||| | ||||| || ||||||||||| ||||| ||||| |||| ||||    
T  45256875 catacccgtgttttgaaatcggggaaaactcatactcatatccacacccagtcaaaacgggaaaaa 45256940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 49 - 108
Target Start/End: Complemental strand, 17845508 - 17845448
Alignment:
Q  49 ataatgaattgatttttt-acattcaagacgggtttgggtataggttcagggtggatactt 108  Q
    ||||| |||||||||||| |||||| |||||||||||||||| |||| ||||||| |||||    
T  17845508 ataataaattgatttttttacattcgagacgggtttgggtatgggttaagggtgggtactt 17845448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 124 - 196
Target Start/End: Original strand, 26755793 - 26755865
Alignment:
Q  124 atacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 196  Q
    |||||| | |||| |||||||  |||||||||||||||| ||||||||| ||||| |||| |||||| |||||    
T  26755793 atacccatattttaaaatcgaagaaaacccaaactcatacccaaacccagtcaaatcgggaaaaacccgtcaa 26755865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 120 - 251
Target Start/End: Complemental strand, 36128146 - 36128015
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    |||||||||||||||| || |||| | ||| | || || |||| ||||||||| ||||| ||||||||| | ||||| || ||| | |||||| ||  ||    
T  36128146 tcccatacccgtgtttcgagatcggggaaaccacatacccatacccaaacccagtcaaaacggggaaaatccgtcaaattaggtttggttcggacgagta 36128047  T
Q  220 cccacaggtatgagctttgttgccatgtctaa 251  Q
     |||| |||||| | |||||||||||| ||||    
T  36128046 accacgggtatgggttttgttgccatgcctaa 36128015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 196
Target Start/End: Complemental strand, 40734621 - 40734548
Alignment:
Q  123 catacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 196  Q
    |||||||||||||  ||||||   |||||||||| ||||| ||||||| |||||||||||  |||||| |||||    
T  40734621 catacccgtgtttgaaaatcgctgaaaacccaaattcatacccaaaccaaatcaaagcggataaaacccgtcaa 40734548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 64; Significance: 1e-27; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 120 - 251
Target Start/End: Complemental strand, 39655313 - 39655182
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    ||||||||||||||||||| |||| | |||||||| || |||| ||||||||||||||| ||||||||||| ||||| |||||| | |||||||||| ||    
T  39655313 tcccatacccgtgttttgagatcggggaaaacccatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattgggtttggttcgggcgggta 39655214  T
Q  220 cccacaggtatgagctttgttgccatgtctaa 251  Q
     |||| |||||| | |||||||||||| ||||    
T  39655213 accacgggtatgggttttgttgccatgcctaa 39655182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 120 - 251
Target Start/End: Original strand, 29284384 - 29284515
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    |||||||||||||||| || |||| |||||||||| || |||| ||||||||| ||||| ||| ||||||| ||||| |||||| | |||||||||| ||    
T  29284384 tcccatacccgtgtttcgagatcgggaaaaacccatacccatacccaaacccagtcaaaacggagaaaacccgtcaaattgggtttggttcgggcgggta 29284483  T
Q  220 cccacaggtatgagctttgttgccatgtctaa 251  Q
     |||| |||||||| |||||||||||| ||||    
T  29284484 accacgggtatgagttttgttgccatgcctaa 29284515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 120 - 251
Target Start/End: Original strand, 52572657 - 52572788
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    ||||||||||||||||||| |||||| ||||| || || |||| ||||||||| |||||  |||||||||||||||| ||| || | |||||||||| ||    
T  52572657 tcccatacccgtgttttgagatcgaggaaaactcatacccatacccaaacccagtcaaaatggggaaaacctgtcaaattgagtttggttcgggcggata 52572756  T
Q  220 cccacaggtatgagctttgttgccatgtctaa 251  Q
     |||| |||||| | |||||||||||| ||||    
T  52572757 accacgggtatgggttttgttgccatgcctaa 52572788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 60 - 246
Target Start/End: Original strand, 39728654 - 39728845
Alignment:
Q  60 attttttacattcaagacgggtttgggtataggttcagggtggatactt-tatatcc----cccttcccatacccgtgttttgaaatcgagaaaaaccca 154  Q
    ||||||||||||   ||||||||||||||| ||||| |||||| ||||| |||| ||    ||| |||||||||||| |||||| |||||| |||||| |    
T  39728654 attttttacatttgggacgggtttgggtatgggttcggggtgggtacttatatacccgttacccatcccatacccgtattttgagatcgaggaaaaccta 39728753  T
Q  155 aactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttacccacaggtatgagctttgttgccatg 246  Q
     ||||||| ||||||||| ||||| ||||||||| | ||||| |||| | | |||||| ||| || |||| |||||| | ||||||||||||    
T  39728754 tactcatacccaaacccagtcaaaacggggaaaatccgtcaaattggatttggttcggacgggtaaccacgggtatgggttttgttgccatg 39728845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 120 - 253
Target Start/End: Complemental strand, 4557345 - 4557212
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    |||||||||| |||||||||| || | ||||||||||| |||| ||||||||| ||||| |||| |||||| ||||| |||||| | ||||||| || ||    
T  4557345 tcccatacccatgttttgaaaacggggaaaacccaaacccatacccaaacccagtcaaaacgggaaaaacccgtcaaattgggttttgttcgggtgggta 4557246  T
Q  220 cccacaggtatgagctttgttgccatgtctaaga 253  Q
     |||| |||||||| ||||||| |||| ||||||    
T  4557245 accacgggtatgagttttgttgtcatgcctaaga 4557212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 123 - 203
Target Start/End: Original strand, 42243438 - 42243518
Alignment:
Q  123 catacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 203  Q
    ||||||||||| ||||||||| |||||||||||||||||| ||||||||| ||||| ||||||||||| ||||| ||||||    
T  42243438 catacccgtgtattgaaatcgggaaaaacccaaactcatacccaaacccagtcaaaccggggaaaacccgtcaaattgggt 42243518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 120 - 251
Target Start/End: Original strand, 49580112 - 49580243
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    ||||||||||||||||||| |||| | |||||||| || |||| ||||||||| ||||| ||||||||||| ||||| |||| | | |||||||||| ||    
T  49580112 tcccatacccgtgttttgagatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattggatttggttcgggcggata 49580211  T
Q  220 cccacaggtatgagctttgttgccatgtctaa 251  Q
     |||| |||||| | ||||||| |||| ||||    
T  49580212 accacgggtatgggttttgttgtcatgcctaa 49580243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 125 - 251
Target Start/End: Complemental strand, 6738440 - 6738314
Alignment:
Q  125 tacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttacccac 224  Q
    ||||||||||||||||||| | |||||||| || |||| ||||||||| ||||| |||| |||||||||||| |||||| | |||||||||| || || |    
T  6738440 tacccgtgttttgaaatcggggaaaacccatacccatacccaaacccagtcaaaacgggaaaaacctgtcaaattgggtttggttcgggcgggtaaccgc 6738341  T
Q  225 aggtatgagctttgttgccatgtctaa 251  Q
     |||||| | ||| |||||||| ||||    
T  6738340 gggtatgggttttattgccatgcctaa 6738314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 120 - 246
Target Start/End: Complemental strand, 7469818 - 7469692
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    |||||||||||||||| || |||  | |||||||| || |||| ||||||||| ||||| ||||||||||| ||||| |||||| | |||||||||| ||    
T  7469818 tcccatacccgtgtttcgagatcagggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgggcgggta 7469719  T
Q  220 cccacaggtatgagctttgttgccatg 246  Q
     |||| |||||| | ||||||||||||    
T  7469718 accacgggtatgggttttgttgccatg 7469692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 120 - 246
Target Start/End: Original strand, 42758422 - 42758548
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    ||||||||| |||||||||||||| |  ||||||||||||||| ||||||||| | ||| ||||||||| | ||||| |||||| | | |||||||| ||    
T  42758422 tcccatacctgtgttttgaaatcgggggaaacccaaactcatacccaaacccagttaaaacggggaaaatccgtcaaattgggtttggatcgggcgggta 42758521  T
Q  220 cccacaggtatgagctttgttgccatg 246  Q
     |||| |||||| | ||||||||||||    
T  42758522 accacgggtatgggttttgttgccatg 42758548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 120 - 246
Target Start/End: Complemental strand, 44953475 - 44953349
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    ||||||||||||||||||| |||| | |||||||| || || | ||||||||| ||||| ||||||||||| ||||| |||||| | ||||| |||| ||    
T  44953475 tcccatacccgtgttttgagatcggggaaaacccatacccaaacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgagcgggta 44953376  T
Q  220 cccacaggtatgagctttgttgccatg 246  Q
     |||| |||||||  ||||||||||||    
T  44953375 accacgggtatgaattttgttgccatg 44953349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 123 - 242
Target Start/End: Original strand, 34119707 - 34119826
Alignment:
Q  123 catacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttaccc 222  Q
    |||||||||||||| |||||| ||||||| |||||||||| |||||||||||||||  |||||||||| ||||| || | | | ||||||| ||||| ||    
T  34119707 catacccgtgttttaaaatcgggaaaaactcaaactcatacccaaacccaatcaaaatggggaaaacccgtcaaattagatttggttcgggtggttaacc 34119806  T
Q  223 acaggtatgagctttgttgc 242  Q
    ||| | ||| | ||||||||    
T  34119807 acatggatgggttttgttgc 34119826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 120 - 246
Target Start/End: Complemental strand, 4016084 - 4015958
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    |||||||||| ||||||||||||| | ||||||||||| |||| ||||||| | ||||| |||| |||||| ||||| ||| || | ||||||| || ||    
T  4016084 tcccatacccatgttttgaaatcggggaaaacccaaacccatacccaaacctagtcaaaacgggaaaaacccgtcaaattgagtttcgttcgggtgggta 4015985  T
Q  220 cccacaggtatgagctttgttgccatg 246  Q
     |||| |||||| | ||||||||||||    
T  4015984 accacgggtatgggttttgttgccatg 4015958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 251
Target Start/End: Original strand, 44639322 - 44639453
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    ||||||||||||||||||| ||   | |||||||| || |||| ||||||||| |||||  |||||||||| ||||| |||||| | |||||| ||| ||    
T  44639322 tcccatacccgtgttttgagatatgggaaaacccatacccatacccaaacccagtcaaaatggggaaaaccagtcaaattgggtttcgttcggacgggta 44639421  T
Q  220 cccacaggtatgagctttgttgccatgtctaa 251  Q
     |||| | |||||| |||||||||||| ||||    
T  44639422 accacggatatgagttttgttgccatgcctaa 44639453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 251
Target Start/End: Complemental strand, 48390857 - 48390726
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    |||||||||||||||||||||||| | |||||||| || |||| ||||||||| ||||| ||||||||| | ||||| |||| | | |||||  ||| ||    
T  48390857 tcccatacccgtgttttgaaatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaatccgtcaaattggatttggttcgaacgggta 48390758  T
Q  220 cccacaggtatgagctttgttgccatgtctaa 251  Q
     || | |||||| | |||||||||||| ||||    
T  48390757 accgcgggtatgggttttgttgccatgcctaa 48390726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 120 - 178
Target Start/End: Original strand, 19111782 - 19111840
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaa 178  Q
    |||| ||||||||||||||||||| ||||||| |||||||||| |||||||||||||||    
T  19111782 tcccgtacccgtgttttgaaatcgggaaaaactcaaactcatacccaaacccaatcaaa 19111840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 120 - 246
Target Start/End: Original strand, 34026002 - 34026128
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    ||||||||| |||||||||||||| | |||||||| || |||||||||||||| ||||| |||| |||| | ||||| |||| | | ||||||| || ||    
T  34026002 tcccatacctgtgttttgaaatcggggaaaacccatacccatatccaaacccagtcaaaacgggaaaaaaccgtcaaattggttttggttcgggagggta 34026101  T
Q  220 cccacaggtatgagctttgttgccatg 246  Q
     || | |||||| | ||||||||||||    
T  34026102 accgcgggtatgggttttgttgccatg 34026128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 213
Target Start/End: Complemental strand, 3414577 - 3414484
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcggg 213  Q
    |||| ||| |||||||  |||||| ||||||| ||||| |||| |||||||||||||||||||||||||||| || | |||||| | |||||||    
T  3414577 tcccgtactcgtgtttgaaaatcgggaaaaactcaaacccataaccaaacccaatcaaagcggggaaaacctatcgaattgggtttggttcggg 3414484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 247
Target Start/End: Original strand, 4553161 - 4553365
Alignment:
Q  48 aataatgaattgattttttacattcaagacgggtttgggtataggttcagggtggatactttatatcc------cccttcccatacccgtgttttgaaat 141  Q
    |||||| |||||||||||||||||| ||||||||||| |||| ||||| |||||  || |||||||||      ||| | ||  |||| |||||||||||    
T  4553161 aataataaattgattttttacattcgagacgggtttgagtatgggttcggggtgtgta-tttatatccctattacccgttccgcacccatgttttgaaat 4553259  T
Q  142 cgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttacccacaggtatgagctttgttg 241  Q
    || ||||||| ||||| |||| | || |||| ||||||||| |||||||  | |||||  || | |||| || || ||||||  ||| ||| ||||||||    
T  4553260 cgggaaaaactcaaacgcatacctaagcccagtcaaagcggagaaaacccataaatttcagtttggttcaggtgggtacccaagggtgtgaactttgttg 4553359  T
Q  242 ccatgt 247  Q
    ||||||    
T  4553360 ccatgt 4553365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 246
Target Start/End: Complemental strand, 22535881 - 22535755
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    ||||||| |||||||||||||| | | ||||| || || |||| ||||||||| ||||| |||||||||||  |||| ||| || | |||||||||| ||    
T  22535881 tcccatatccgtgttttgaaattggggaaaactcatacccatacccaaacccagtcaaaacggggaaaacccatcaaattgagtttggttcgggcggata 22535782  T
Q  220 cccacaggtatgagctttgttgccatg 246  Q
     || | |||||| | ||||||||||||    
T  22535781 accgcgggtatgggttttgttgccatg 22535755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 246
Target Start/End: Original strand, 44252795 - 44252921
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    |||||||||||||||| || |||| | |||||||| || |||| ||||||||| ||||| ||||||||||| ||||| || ||| |  ||||| ||| ||    
T  44252795 tcccatacccgtgtttcgagatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaatttggtttgattcggacgggta 44252894  T
Q  220 cccacaggtatgagctttgttgccatg 246  Q
     |||| ||||||   ||||||||||||    
T  44252895 accacgggtatggattttgttgccatg 44252921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 55 - 231
Target Start/End: Complemental strand, 30904925 - 30904747
Alignment:
Q  55 aattgattttttacattcaagacgggtttgggtataggttcagggtggatactttatatccccct-----tcccatacccgtgttttgaaatcgagaaaa 149  Q
    |||||||||  ||||||| |||||| ||||||||| ||||| |||||| ||| | |||||||| |     |||| ||||||||||||||||||   ||||    
T  30904925 aattgatttcctacattcgagacggatttgggtatgggttcggggtgggtacct-atatccccgtacccgtcccgtacccgtgttttgaaatcagaaaaa 30904827  T
Q  150 acccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttacccacaggtatg 231  Q
    | ||||||||||| ||||| ||| | ||||||||| ||||| ||||| |||| | |||||||| ||| ||||| | ||||||    
T  30904826 agccaaactcatacccaaa-ccagtaaaagcgggg-aaacccgtcaaattggatttagttcggacggatacccgcgggtatg 30904747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 125 - 201
Target Start/End: Original strand, 20087050 - 20087126
Alignment:
Q  125 tacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgg 201  Q
    ||||||||||||||||||| | |||||||| || |||||||||||||| ||||| ||| ||||| | ||||| ||||    
T  20087050 tacccgtgttttgaaatcggggaaaacccatacccatatccaaacccagtcaaaacggagaaaatccgtcaaattgg 20087126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 130 - 246
Target Start/End: Original strand, 54317202 - 54317318
Alignment:
Q  130 gtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttacccacaggta 229  Q
    |||||||||||||| | ||||| ||||| ||||  |||||||| ||||| ||||||||||| ||||| |||| | | |||||||||| || |||| | ||    
T  54317202 gtgttttgaaatcggggaaaactcaaacacatactcaaacccagtcaaaacggggaaaacccgtcaaattggatttggttcgggcgggtaaccacggata 54317301  T
Q  230 tgagctttgttgccatg 246  Q
    ||   ||||||||||||    
T  54317302 tggattttgttgccatg 54317318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 120 - 202
Target Start/End: Complemental strand, 10043322 - 10043240
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttggg 202  Q
    |||||||||| |||||||||| |  | ||||||||||| |||| ||||||||| |||||| || ||||||| ||||| |||||    
T  10043322 tcccatacccatgttttgaaaccagggaaaacccaaacccatacccaaacccagtcaaagtggagaaaacccgtcaaattggg 10043240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 120 - 246
Target Start/End: Complemental strand, 44106832 - 44106708
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    ||||||||||||||||| | || | | |||||| | ||||||| ||||||||| ||||| ||||||||||| ||||| ||| || | |||||||||| ||    
T  44106832 tcccatacccgtgttttaagattggggaaaacc-atactcatacccaaacccagtcaaaacggggaaaacc-gtcaaattgagttttgttcgggcgggta 44106735  T
Q  220 cccacaggtatgagctttgttgccatg 246  Q
      ||| |||||| | ||||||||||||    
T  44106734 atcacgggtatgtgttttgttgccatg 44106708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 123 - 188
Target Start/End: Original strand, 34154465 - 34154530
Alignment:
Q  123 catacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaa 188  Q
    ||||||| ||||||||||||| | ||||| || || |||||||||||||| ||||| |||||||||    
T  34154465 catacccatgttttgaaatcggggaaaacacatacccatatccaaacccagtcaaaacggggaaaa 34154530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 131 - 188
Target Start/End: Original strand, 38347625 - 38347682
Alignment:
Q  131 tgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaa 188  Q
    ||||||||||||||||||||| |||||| ||||||||| ||||| ||| ||| |||||    
T  38347625 tgttttgaaatcgagaaaaacgcaaacttatatccaaagccaattaaaacggagaaaa 38347682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 122 - 251
Target Start/End: Complemental strand, 48305679 - 48305550
Alignment:
Q  122 ccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttacc 221  Q
    |||||||||||||||||||| | | ||||| || || |||| ||||||||| |||||  |||||||||| ||||  |||||| | ||||||| || || |    
T  48305679 ccatacccgtgttttgaaattggggaaaactcatacccataaccaaacccagtcaaaatggggaaaacccgtcagattgggtttggttcgggtgggtaac 48305580  T
Q  222 cacaggtatgagctttgttgccatgtctaa 251  Q
    | | ||||||   ||||||| |||||||||    
T  48305579 cgcgggtatggattttgttgtcatgtctaa 48305550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 476 - 608
Target Start/End: Complemental strand, 360707 - 360575
Alignment:
Q  476 tttaatgcacttggcactattgcttttgcctatgctggacacaatgtggtgttagagatccaagcaacaattccgtcgacaccggagaaaccatccaagg 575  Q
    |||||||||||||| || || || ||||||| ||| ||||| | ||||||  ||||||| ||||| ||| | || ||  ||   || ||||| ||||| |    
T  360707 tttaatgcacttggaacaatagcgtttgcctttgccggacatagtgtggttctagagattcaagctacattaccctcttcagaagaaaaaccttccaaag 360608  T
Q  576 ttccaatgtggagaggagttgttgttgcataca 608  Q
    | |||||||||||||| ||||||||||||||||    
T  360607 taccaatgtggagaggtgttgttgttgcataca 360575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 120 - 216
Target Start/End: Complemental strand, 3385896 - 3385800
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcgg 216  Q
    |||| ||||||||||||||||| |  |||||  ||||  |||| | ||||||| ||||||||||||||||| ||| | |||||| | ||||||||||    
T  3385896 tcccgtacccgtgttttgaaatgggtaaaaattcaaatccatacctaaacccagtcaaagcggggaaaacccgtcgaattgggtttggttcgggcgg 3385800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 250
Target Start/End: Original strand, 23580878 - 23581005
Alignment:
Q  123 catacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttaccc 222  Q
    ||||| ||||||||||||| | | ||||| || || |||| ||||||||| ||||| |||| |||||| ||||| |||  | || ||||||| | || ||    
T  23580878 catactcgtgttttgaaattggggaaaactcatacccatacccaaacccagtcaaaacgggaaaaacccgtcaaattgaatttaattcgggcaggtaacc 23580977  T
Q  223 acaggtatgagctttgttgccatgtcta 250  Q
     |||||||| | ||||||| ||||||||    
T  23580978 gcaggtatgtgttttgttgtcatgtcta 23581005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 178
Target Start/End: Complemental strand, 23910289 - 23910234
Alignment:
Q  123 catacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaa 178  Q
    |||| |||||||||||||||||| ||||| ||||||||||  |||||||| |||||    
T  23910289 catatccgtgttttgaaatcgaggaaaactcaaactcatacacaaacccagtcaaa 23910234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 162
Target Start/End: Original strand, 26207318 - 26207357
Alignment:
Q  123 catacccgtgttttgaaatcgagaaaaacccaaactcata 162  Q
    ||||||||||||||||||||| |||||| |||||||||||    
T  26207318 catacccgtgttttgaaatcgggaaaaatccaaactcata 26207357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 164 - 246
Target Start/End: Complemental strand, 29858571 - 29858489
Alignment:
Q  164 ccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttacccacaggtatgagctttgttgccatg 246  Q
    ||||||||| ||||| ||||||||| | || || |||||| | |||||||||| || |||| |||||| | ||||||||||||    
T  29858571 ccaaacccagtcaaaacggggaaaatccgttaaattgggtttggttcgggcgggtaaccacgggtatgggttttgttgccatg 29858489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 178
Target Start/End: Original strand, 2490358 - 2490411
Alignment:
Q  125 tacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaa 178  Q
    ||||||| ||||||||||| | ||||| ||||| |||||||||||||| |||||    
T  2490358 tacccgtattttgaaatcggggaaaactcaaacccatatccaaacccagtcaaa 2490411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 251
Target Start/End: Complemental strand, 23546954 - 23546857
Alignment:
Q  154 aaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttacccacaggtatgagctttgttgccatgtctaa 251  Q
    |||| |||| ||||||||| ||||| ||||||||||| || || |||||| | ||||  |||| || |||| |||||| | |||||||||||| ||||    
T  23546954 aaacccatacccaaacccagtcaaaacggggaaaacccgttaaattgggtttggttcatgcgggtaaccacgggtatgggttttgttgccatgcctaa 23546857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 63; Significance: 5e-27; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 456 - 594
Target Start/End: Complemental strand, 14198244 - 14198106
Alignment:
Q  456 caggaacagtctttgacttctttaatgcacttggcactattgcttttgcctatgctggacacaatgtggtgttagagatccaagcaacaattccgtcgac 555  Q
    ||||||| |||||||  ||||| ||||| |||||   | | |||||||| ||||| |||||||| ||||||||||| ||||||||||||||||| || ||    
T  14198244 caggaactgtctttggtttcttcaatgcccttggagatgtggcttttgcttatgccggacacaacgtggtgttagaaatccaagcaacaattccatctac 14198145  T
Q  556 accggagaaaccatccaaggttccaatgtggagaggagt 594  Q
    |||||| |||||||| |||| ||||||||||||||||||    
T  14198144 accggaaaaaccatctaagggtccaatgtggagaggagt 14198106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 120 - 251
Target Start/End: Original strand, 16866222 - 16866353
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    ||||||||||||||||||| |||| | |||||||| || |||| ||||||||| ||||| ||||||||||| ||||| |||||| | |||||||||| ||    
T  16866222 tcccatacccgtgttttgagatcggggaaaacccatacccataaccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgggcgggta 16866321  T
Q  220 cccacaggtatgagctttgttgccatgtctaa 251  Q
     |||| | |||||| |||||||||||| ||||    
T  16866322 accacggatatgagttttgttgccatgcctaa 16866353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 120 - 246
Target Start/End: Original strand, 39317048 - 39317174
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    |||||||||||||||||||||||||| ||||| || ||||||||||||||||| ||||| ||||||||||| ||||| ||| || | |||||||||| ||    
T  39317048 tcccatacccgtgttttgaaatcgaggaaaactcatactcatatccaaacccagtcaaaacggggaaaacccgtcaaattgagtttggttcgggcggata 39317147  T
Q  220 cccacaggtatgagctttgttgccatg 246  Q
     || |  ||||||  ||||||||||||    
T  39317148 accgcgagtatgaattttgttgccatg 39317174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 122 - 246
Target Start/End: Original strand, 10072521 - 10072645
Alignment:
Q  122 ccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttacc 221  Q
    |||||||||||||||||||||| | |||||||| || |||| ||||||||| ||||| ||||||||||| ||||| |||||| | |||||||||| || |    
T  10072521 ccatacccgtgttttgaaatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgggcgggtaac 10072620  T
Q  222 cacaggtatgagctttgttgccatg 246  Q
    | | |||||| | ||||||||||||    
T  10072621 cgcgggtatgggttttgttgccatg 10072645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 75 - 251
Target Start/End: Original strand, 12980380 - 12980561
Alignment:
Q  75 gacgggtttgggtataggttcagggtggatactt-tatatcc----cccttcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaac 169  Q
    ||||||||||||||| ||||| |||||| ||||| |||| ||    ||| |||||||||||||||||||||||| | |||||| |||| |||| ||||||    
T  12980380 gacgggtttgggtatgggttcggggtgggtacttatatacccattacccgtcccatacccgtgttttgaaatcggggaaaaccaaaacccatacccaaac 12980479  T
Q  170 ccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttacccacaggtatgagctttgttgccatgtctaa 251  Q
    ||| |||||  |||||||||| || || ||| || | ||||  |||| || |||| |||||||| |||||||||||||||||    
T  12980480 ccagtcaaaatggggaaaacccgttaaattgagtttggttctagcgggtaaccacgggtatgagttttgttgccatgtctaa 12980561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 120 - 246
Target Start/End: Original strand, 17885518 - 17885644
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    |||||||||| |||||| |||||| | |||||||| || ||||| |||||||| ||||| ||||||||||| ||||| |||||| | |||||||| | ||    
T  17885518 tcccatacccatgttttaaaatcggggaaaacccatacccatattcaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgggcaggta 17885617  T
Q  220 cccacaggtatgagctttgttgccatg 246  Q
     |||| |||||| | ||||||||||||    
T  17885618 accacgggtatgggttttgttgccatg 17885644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 120 - 246
Target Start/End: Original strand, 25905681 - 25905807
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    ||||||||| ||||||||| || | | |||||||| || |||| ||||||||| |||||  |||||||||||||||| |||||| ||||||| |||| ||    
T  25905681 tcccatacctgtgttttgagattggggaaaacccatacccatacccaaacccagtcaaaaaggggaaaacctgtcaaattgggtttagttcgagcgggta 25905780  T
Q  220 cccacaggtatgagctttgttgccatg 246  Q
     |||| |||||| | ||||||||||||    
T  25905781 accacgggtatgggttttgttgccatg 25905807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 120 - 246
Target Start/End: Original strand, 35074523 - 35074649
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    ||||||||||||||||| | |||| | |||||||| || |||| ||||||||| ||||| ||||||||||| ||| | |||||| | |||||||||| ||    
T  35074523 tcccatacccgtgttttaagatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtctaattgggtttggttcgggcgggta 35074622  T
Q  220 cccacaggtatgagctttgttgccatg 246  Q
     |||| |||||| | ||||||||||||    
T  35074623 accacgggtatgggttttgttgccatg 35074649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 120 - 251
Target Start/End: Original strand, 21702712 - 21702843
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    |||||||||||||||| || |||| | |||||||| ||||||| ||||||||| ||||| |||| |||| | ||||| |||||| | |||||||||| ||    
T  21702712 tcccatacccgtgtttcgagatcggggaaaacccatactcatacccaaacccagtcaaaacgggaaaaatccgtcaaattgggtttggttcgggcgggta 21702811  T
Q  220 cccacaggtatgagctttgttgccatgtctaa 251  Q
     |||| | |||| | |||||||||||| ||||    
T  21702812 accacggatatgggttttgttgccatgcctaa 21702843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 120 - 246
Target Start/End: Complemental strand, 27850366 - 27850246
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    |||||||||||||||||||||||| | |||||||| ||      ||||||||||||||| ||||||||| | ||||| |||||| | |||||||||| ||    
T  27850366 tcccatacccgtgttttgaaatcggggaaaacccatac------ccaaacccaatcaaaacggggaaaaaccgtcaaattgggtttggttcgggcgggta 27850273  T
Q  220 cccacaggtatgagctttgttgccatg 246  Q
     |||| | |||||| ||||||||||||    
T  27850272 accacggatatgagttttgttgccatg 27850246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 120 - 246
Target Start/End: Complemental strand, 44734397 - 44734273
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    |||||||||||||||||||||||||||||||| || || |||  ||||||||| |||||   ||||||||| ||||| |||||| | |||||||||| ||    
T  44734397 tcccatacccgtgttttgaaatcgagaaaaacacatacacattcccaaacccagtcaaa--agggaaaacccgtcaaattgggtttggttcgggcgggta 44734300  T
Q  220 cccacaggtatgagctttgttgccatg 246  Q
     || |  ||||||| ||||||||||||    
T  44734299 accgcgagtatgagttttgttgccatg 44734273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 120 - 246
Target Start/End: Original strand, 30650684 - 30650810
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    ||||||||||||||||||| || | | ||||| || || |||| | ||||||| ||||| ||||||||||| ||||| |||||| | |||||||||| ||    
T  30650684 tcccatacccgtgttttgagattggggaaaactcatacccatacctaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgggcgggta 30650783  T
Q  220 cccacaggtatgagctttgttgccatg 246  Q
     |||| |||||||| ||||||| ||||    
T  30650784 accacgggtatgagttttgttgacatg 30650810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 62 - 255
Target Start/End: Original strand, 7779998 - 7780196
Alignment:
Q  62 tttttacattcaagacgggtttgggtataggttcagggtggatactt-tatatccc----ccttcccatacccgtgttttgaaatcgagaaaaacccaaa 156  Q
    ||||||||||   ||||||||||||||||||||| |||||| ||| | |||| ||     || ||||||||||||||||||| |||| | |||||||| |    
T  7779998 tttttacatttgggacgggtttgggtataggttcggggtgggtacctatatacccattatccgtcccatacccgtgttttgagatcggggaaaacccata 7780097  T
Q  157 ctcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttacccacaggtatgagctttgttgccatgtctaagaga 255  Q
    | |||| ||||||||| ||||| ||||||||| | ||||| ||| || | ||||||  || || |||| |||||| | |||||||||||| || |||||    
T  7780098 cccatacccaaacccagtcaaaacggggaaaatccgtcaaattgagtttggttcggatgggtaaccacgggtatgggttttgttgccatgcctgagaga 7780196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 120 - 212
Target Start/End: Original strand, 45380160 - 45380251
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgg 212  Q
    |||||||||||| ||||||||||| |||||||||| || |||||||||||||| ||||| | ||||||||| ||||| |||||| | ||||||    
T  45380160 tcccatacccgtattttgaaatcgggaaaaacccatacccatatccaaacccagtcaaaacagggaaaacc-gtcaaattgggtttggttcgg 45380251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 215
Target Start/End: Complemental strand, 18125268 - 18125173
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcg 215  Q
    |||||||||||||||| || |||| |||||||||| |||||||  |||||||| ||||| ||||||||||| ||||| |||| | | |||||||||    
T  18125268 tcccatacccgtgtttcgagatcgggaaaaacccatactcatacacaaacccagtcaaaacggggaaaacccgtcaaattggatttggttcgggcg 18125173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 61 - 216
Target Start/End: Complemental strand, 38139896 - 38139736
Alignment:
Q  61 ttttttacattcaagacgggtttgggtataggttcagggtggatactt-tatatcc----cccttcccatacccgtgttttgaaatcgagaaaaacccaa 155  Q
    |||||||||||  |||||||||||| ||| ||||| |||||| ||||| ||||  |    ||| |||||||| ||||||||||||| | | ||||||||     
T  38139896 ttttttacatttgagacgggtttggttatgggttcggggtgggtacttatatactcattacccgtcccatactcgtgttttgaaattggggaaaacccat 38139797  T
Q  156 actcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcgg 216  Q
    || |||||||||||||| ||||| ||||||||| |  |||| |||||| | ||||||||||    
T  38139796 acccatatccaaacccagtcaaaacggggaaaatccatcaaattgggtttggttcgggcgg 38139736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 251
Target Start/End: Complemental strand, 45885805 - 45885674
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    ||||||||||||||||||| |||| | ||||| || || |||| ||||||||| ||||| ||| ||||||| || || |||||| | ||||| |||| ||    
T  45885805 tcccatacccgtgttttgagatcggggaaaactcatacccatacccaaacccagtcaaaacggagaaaacccgttaaattgggtttggttcgagcgggta 45885706  T
Q  220 cccacaggtatgagctttgttgccatgtctaa 251  Q
     |||| |||||| | |||||||||||| ||||    
T  45885705 accacgggtatgggttttgttgccatgcctaa 45885674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 246
Target Start/End: Complemental strand, 18825912 - 18825780
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatcc------aaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcggg 213  Q
    |||||||||||||||||||||||| | ||||||||||| || | ||      ||||||| ||||| ||||||||||| ||||| |||||| | ||||||     
T  18825912 tcccatacccgtgttttgaaatcggggaaaacccaaacccacaccctcacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgga 18825813  T
Q  214 cggttacccacaggtatgagctttgttgccatg 246  Q
    |||||| |||  |||||| | ||||||||||||    
T  18825812 cggttaaccatgggtatgggttttgttgccatg 18825780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 37182327 - 37182403
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 196  Q
    |||||||||||||||||||| |||   |||||||| ||||||| ||||||||| ||||| ||||||||||| |||||    
T  37182327 tcccatacccgtgttttgaattcggagaaaacccatactcatacccaaacccagtcaaaacggggaaaacccgtcaa 37182403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 120 - 216
Target Start/End: Complemental strand, 39456055 - 39455959
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcgg 216  Q
    |||||||||| ||||||||||||| | |||||||| |  |||| ||||||||| ||||| ||||||||||  ||||| |||||| | ||||||||||    
T  39456055 tcccatacccatgttttgaaatcggggaaaacccatatccatacccaaacccagtcaaaacggggaaaactcgtcaaattgggtttggttcgggcgg 39455959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 120 - 251
Target Start/End: Original strand, 24753217 - 24753347
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    ||||||||||||||||||| |||| ||||| |||| || |||||||||||||| ||||| ||| ||||| | ||||| |||  | | |||||| ||| ||    
T  24753217 tcccatacccgtgttttgagatcgggaaaa-cccatacccatatccaaacccagtcaaaacggagaaaatccgtcaaattgaatttggttcggacgggta 24753315  T
Q  220 cccacaggtatgagctttgttgccatgtctaa 251  Q
     |||| |||||| | |||||||||||| ||||    
T  24753316 accacgggtatgggttttgttgccatgcctaa 24753347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 246
Target Start/End: Original strand, 3157136 - 3157261
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    |||||||||| | ||||||||||| | |||||| |||| |||| ||||||| | ||||||||||||||||| | ||| || ||| | |||||||||| ||    
T  3157136 tcccatacccatattttgaaatcggggaaaacctaaacccatacccaaaccaagtcaaagcggggaaaacc-gacaaattaggtttggttcgggcgggta 3157234  T
Q  220 cccacaggtatgagctttgttgccatg 246  Q
    ||| || ||||||  |||| |||||||    
T  3157235 cccgcatgtatgatttttggtgccatg 3157261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 116 - 178
Target Start/End: Complemental strand, 37103171 - 37103109
Alignment:
Q  116 cccttcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaa 178  Q
    |||||||| ||||||| ||||||||||  ||||||| |||||| |||||||||||||||||||    
T  37103171 cccttcccgtacccgtattttgaaatcaggaaaaacacaaacttatatccaaacccaatcaaa 37103109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 178
Target Start/End: Complemental strand, 42908081 - 42908023
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaa 178  Q
    |||| ||||||| ||||||||||| | |||||||||||||||| |||||||||||||||    
T  42908081 tcccgtacccgtattttgaaatcggggaaaacccaaactcatacccaaacccaatcaaa 42908023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 214
Target Start/End: Complemental strand, 44658503 - 44658413
Alignment:
Q  124 atacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggc 214  Q
    |||||||||||||||||||| ||||||| || || |||| ||||||||| ||||| || |||||||| ||||| |||| | | ||||||||    
T  44658503 atacccgtgttttgaaatcgggaaaaactcatacccatacccaaacccagtcaaaacgaggaaaacccgtcaaattggatttggttcgggc 44658413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 188
Target Start/End: Original strand, 5377138 - 5377206
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaa 188  Q
    ||||||||| |||||||||||||| | ||||||||||||||||  ||| |||||||||| |||| ||||    
T  5377138 tcccatacctgtgttttgaaatcggggaaaacccaaactcatactcaaccccaatcaaaacgggaaaaa 5377206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 128 - 216
Target Start/End: Original strand, 37579322 - 37579410
Alignment:
Q  128 ccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcgg 216  Q
    |||||||| ||||||| |||||| |||||| |||| ||||||| | ||||| ||||||||||| ||| | |||||| | ||||||||||    
T  37579322 ccgtgtttcgaaatcgggaaaaatccaaacccatacccaaacctagtcaaaacggggaaaacccgtctaattgggtttggttcgggcgg 37579410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 123 - 203
Target Start/End: Original strand, 43507501 - 43507581
Alignment:
Q  123 catacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 203  Q
    ||||||| ||||||||||||| | |||||||| ||| ||| ||||||||| ||||| |||||||||||  |||| ||||||    
T  43507501 catacccatgttttgaaatcggggaaaacccatacttatacccaaacccagtcaaaacggggaaaacccatcaaattgggt 43507581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 125 - 188
Target Start/End: Original strand, 27063196 - 27063259
Alignment:
Q  125 tacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaa 188  Q
    ||||||| ||||||||||||| ||||| |||||||||| ||||||||| ||||| | |||||||    
T  27063196 tacccgtattttgaaatcgaggaaaactcaaactcatacccaaacccagtcaaatcagggaaaa 27063259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 120 - 183
Target Start/End: Complemental strand, 29014992 - 29014929
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggg 183  Q
    |||| ||||||| ||||||||||| ||||||| |||||||||| | ||||||||||||| ||||    
T  29014992 tcccgtacccgtattttgaaatcgggaaaaactcaaactcatacctaaacccaatcaaatcggg 29014929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 123 - 246
Target Start/End: Complemental strand, 41741487 - 41741364
Alignment:
Q  123 catacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttaccc 222  Q
    ||||||||||||||||||||| | |||||||| ||||||| ||||| ||| | |||  |||||||||   |||| |||||| | |||||||||| || ||    
T  41741487 catacccgtgttttgaaatcggggaaaacccatactcatacccaaatccagtaaaaatggggaaaactcatcaaattgggtttggttcgggcgggtaacc 41741388  T
Q  223 acaggtatgagctttgttgccatg 246  Q
     ||  |||| | ||||||||||||    
T  41741387 gcaaatatgggttttgttgccatg 41741364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 120 - 190
Target Start/End: Complemental strand, 27896515 - 27896445
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacc 190  Q
    |||||||||| |||||||||||   | ||||||||||| |||| |||||||||||||||||| | ||||||    
T  27896515 tcccatacccatgttttgaaataagggaaaacccaaacccatacccaaacccaatcaaagcgagaaaaacc 27896445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 120 - 246
Target Start/End: Original strand, 37218058 - 37218184
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    |||| |||| |||||||||||| |   ||||| |||||||||| ||||||||| ||||| |||||||||||  |||| ||| || | ||||||| || ||    
T  37218058 tcccgtacctgtgttttgaaataggataaaactcaaactcatacccaaacccagtcaaaacggggaaaacccatcaaattgagtttggttcgggtgggta 37218157  T
Q  220 cccacaggtatgagctttgttgccatg 246  Q
     || | |||||||| ||||||| ||||    
T  37218158 tccgctggtatgagttttgttgtcatg 37218184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 123 - 196
Target Start/End: Complemental strand, 8906626 - 8906553
Alignment:
Q  123 catacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 196  Q
    ||||| |||||||||||||||   ||||| ||||| |||| ||||| ||||||||||||| ||||||| |||||    
T  8906626 catactcgtgttttgaaatcggagaaaactcaaacccatacccaaatccaatcaaagcggagaaaacccgtcaa 8906553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 120 - 184
Target Start/End: Original strand, 22973441 - 22973505
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcgggg 184  Q
    |||| ||||||| ||||||||||| | ||||||||||| |||| ||||||||| ||||| |||||    
T  22973441 tcccgtacccgtattttgaaatcgtggaaaacccaaacccatacccaaacccagtcaaatcgggg 22973505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 164 - 240
Target Start/End: Original strand, 23457156 - 23457232
Alignment:
Q  164 ccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttacccacaggtatgagctttgtt 240  Q
    ||||||||| ||||||||||||||||| ||||| |||||| | ||||| | || ||||| | |||||||| ||||||    
T  23457156 ccaaacccagtcaaagcggggaaaacccgtcaaattgggtttggttcgagagggtacccgcgggtatgagttttgtt 23457232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 33841131 - 33841206
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 196  Q
    |||||||||||||||||||||||| | ||||| |||| |||||  |||| ||| |||||||||| |||||| |||||    
T  33841131 tcccatacccgtgttttgaaatcggggaaaactcaaattcatactcaaa-ccagtcaaagcgggaaaaacccgtcaa 33841206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 120 - 251
Target Start/End: Complemental strand, 3226986 - 3226855
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    |||||||||||||||||||||||| | |||||||| || ||||  ||||| || | ||| || |||||| | ||||| |||||| | |||||| ||| ||    
T  3226986 tcccatacccgtgttttgaaatcggggaaaacccatacccatactcaaactcagttaaaacgaggaaaatccgtcaaattgggtttggttcggacgggta 3226887  T
Q  220 cccacaggtatgagctttgttgccatgtctaa 251  Q
     || || |||||   |||||||||||| ||||    
T  3226886 accgcatgtatggattttgttgccatgcctaa 3226855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 121 - 196
Target Start/End: Complemental strand, 3274722 - 3274648
Alignment:
Q  121 cccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 196  Q
    |||||||| ||||||| |||||||||||||||||||||| ||  |||||| | ||| | |||||||||||| ||||    
T  3274722 cccataccagtgttttaaaatcgagaaaaacccaaactc-tactcaaacctattcataacggggaaaacctatcaa 3274648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 190
Target Start/End: Original strand, 4101520 - 4101665
Alignment:
Q  50 taatgaattgattttttacattcaagacgggtttgggtataggttcagggtggatactttatatccc------ccttcccatacccgtgttttgaaatcg 143  Q
    |||| ||||||||||  ||||||| |||||||| |||||| |||||||| ||| ||| | |||||||      || |||  |||| |||||||||||||     
T  4101520 taataaattgattttcaacattcaggacgggttagggtatgggttcaggatgggtacat-atatccctgtaacccatcctgtacctgtgttttgaaatca 4101618  T
Q  144 agaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacc 190  Q
     | ||||||||||| | |||||||||| | |||||||||| ||||||    
T  4101619 tggaaaacccaaacccttatccaaacctagtcaaagcgggaaaaacc 4101665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 246
Target Start/End: Original strand, 17851932 - 17852031
Alignment:
Q  147 aaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttacccacaggtatgagctttgttgccatg 246  Q
    |||||||| || |||| ||||||||| ||||| ||| ||||| |  |||| |||||| | |||||||||| || ||||| ||||| | ||||||||||||    
T  17851932 aaaacccatacccatacccaaacccagtcaaaacggagaaaatccatcaaattgggtttggttcgggcgggtaaccacaagtatgggttttgttgccatg 17852031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 120 - 162
Target Start/End: Complemental strand, 10995874 - 10995832
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcata 162  Q
    |||||||||||||| ||||||||| | ||||||||||||||||    
T  10995874 tcccatacccgtgtcttgaaatcggggaaaacccaaactcata 10995832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 164 - 246
Target Start/End: Complemental strand, 26004482 - 26004400
Alignment:
Q  164 ccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttacccacaggtatgagctttgttgccatg 246  Q
    ||||||||| ||||| |||| ||||||  |||| ||| || | |||||||||| || |||| |||||||| ||||||||||||    
T  26004482 ccaaacccagtcaaaacgggaaaaacccatcaaattgtgtttggttcgggcgggtaaccacgggtatgagttttgttgccatg 26004400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 120 - 178
Target Start/End: Complemental strand, 30839174 - 30839116
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaa 178  Q
    |||||||||||| ||||||||||  | ||||| |||||||||| ||||||||| |||||    
T  30839174 tcccatacccgtattttgaaatcagggaaaactcaaactcatacccaaacccagtcaaa 30839116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 122 - 216
Target Start/End: Original strand, 38152942 - 38153035
Alignment:
Q  122 ccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcgg 216  Q
    |||||||| ||||||||||||| | |||||||| || |||| ||||||||| ||||| | ||||||| | ||||| ||| || | ||||||||||    
T  38152942 ccatacccatgttttgaaatcggggaaaacccatacccatacccaaacccagtcaaaac-gggaaaatccgtcaaattgagtttggttcgggcgg 38153035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 178
Target Start/End: Original strand, 2472041 - 2472094
Alignment:
Q  125 tacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaa 178  Q
    ||||||| || ||||||||  |||||| |||||||||| |||||||||||||||    
T  2472041 tacccgtattatgaaatcggaaaaaactcaaactcatacccaaacccaatcaaa 2472094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 178
Target Start/End: Complemental strand, 3909308 - 3909255
Alignment:
Q  125 tacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaa 178  Q
    ||||||||||| |||||   | ||||||||||||||||||||||| ||||||||    
T  3909308 tacccgtgtttcgaaattagggaaaacccaaactcatatccaaactcaatcaaa 3909255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 157
Target Start/End: Complemental strand, 23475303 - 23475266
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaac 157  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  23475303 tcccaaacccgtgttttgaaatcgggaaaaacccaaac 23475266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 246
Target Start/End: Original strand, 24425466 - 24425547
Alignment:
Q  165 caaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttacccacaggtatgagctttgttgccatg 246  Q
    |||||||||||||| ||| ||||| | ||||| |||||| | |||||||| | || ||||  ||||||| ||||||||||||    
T  24425466 caaacccaatcaaaacggagaaaatccgtcaaattgggtttggttcgggctggtaaccacgtgtatgagttttgttgccatg 24425547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 10990901 - 10990817
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtg 204  Q
    |||| ||||||| ||||||||||| | |||| || ||| ||||  ||||| || |||| |||||||||||||||| | |||||||    
T  10990901 tcccgtacccgtattttgaaatcggggaaaaacccaacccatactcaaactcattcaaggcggggaaaacctgtctaattgggtg 10990817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 120 - 160
Target Start/End: Original strand, 42005957 - 42005997
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactca 160  Q
    |||||||| ||||||||||||| ||| ||||||||||||||    
T  42005957 tcccatacacgtgttttgaaattgaggaaaacccaaactca 42005997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 1e-24; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 120 - 246
Target Start/End: Complemental strand, 19572552 - 19572426
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    |||||||||||||||||||||||| |||||||||| || |||| ||||||||| |||||  |||||||||| ||||| || ||| | |||||||||| ||    
T  19572552 tcccatacccgtgttttgaaatcgggaaaaacccatacccatacccaaacccagtcaaaatggggaaaacccgtcaaattaggtttggttcgggcgggta 19572453  T
Q  220 cccacaggtatgagctttgttgccatg 246  Q
     ||||| ||||| | ||||||||||||    
T  19572452 accacaagtatgggttttgttgccatg 19572426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 34085284 - 34085360
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 196  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||| |||||| ||||||||| ||||||| |||||    
T  34085284 tcccatactcgtgttttgaaatcgggaaaaacccaaactcatatcctaacccagtcaaagcggagaaaacccgtcaa 34085360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 62 - 246
Target Start/End: Complemental strand, 36187323 - 36187134
Alignment:
Q  62 tttttacattcaagacgggtttgggtataggttcagggtggatactt-tatatcc----cccttcccatacccgtgttttgaaatcgagaaaaacccaaa 156  Q
    ||||||||||   ||||||||||||||| |||||||||||| ||| | |||| ||    ||| ||||||||||||||||||| |||| | |||||||| |    
T  36187323 tttttacatttgggacgggtttgggtatgggttcagggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccata 36187224  T
Q  157 ctcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttacccacaggtatgagctttgttgccatg 246  Q
    | |||| ||||||||| ||||| ||||||||||| | ||| ||| || | |||||||||| || | || |||||| | ||||||||||||    
T  36187223 cccatacccaaacccagtcaaaacggggaaaacccgccaaattgagtttggttcgggcgggtaacgacgggtatgggttttgttgccatg 36187134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 120 - 246
Target Start/End: Original strand, 23968628 - 23968754
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    ||||||||||||||||||||| || | |||||||| || |||| |||||||||||||||  |||||||| | ||||| |||||| | |||||||||| ||    
T  23968628 tcccatacccgtgttttgaaaccggggaaaacccatacccatacccaaacccaatcaaaatggggaaaatccgtcaaattgggtttggttcgggcgggta 23968727  T
Q  220 cccacaggtatgagctttgttgccatg 246  Q
     || | |||||| | ||||||||||||    
T  23968728 accgcgggtatgggttttgttgccatg 23968754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 120 - 178
Target Start/End: Complemental strand, 33293571 - 33293513
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaa 178  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  33293571 tcccatacccgtgttttgaaatcgggaaaaacccaaactcatacccaaacccaatcaaa 33293513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 123 - 203
Target Start/End: Original strand, 13798290 - 13798370
Alignment:
Q  123 catacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 203  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||||||| ||| | ||||||||||| || || ||||||    
T  13798290 catacccgtgttttgaaatcgggaaaaacccaaactcatacccaaacccagtcataccggggaaaacccgttaaattgggt 13798370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 24710896 - 24710972
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 196  Q
    ||||||||||||||||||| |||| | |||||||| ||||||||||||||||| ||||| ||||||||||| |||||    
T  24710896 tcccatacccgtgttttgagatcggggaaaacccatactcatatccaaacccagtcaaaacggggaaaacccgtcaa 24710972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 120 - 250
Target Start/End: Complemental strand, 44615515 - 44615385
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    ||||||||||||||||| |||||  | |||||||||||||||| ||||||||| ||||| |||| |||||| ||||| ||| || | ||  ||| || ||    
T  44615515 tcccatacccgtgtttttaaatcagggaaaacccaaactcatacccaaacccagtcaaaacgggaaaaacccgtcaaattgagtttggtctgggtgggta 44615416  T
Q  220 cccacaggtatgagctttgttgccatgtcta 250  Q
     |||| |||||| | ||||||||||||||||    
T  44615415 accacgggtatgggttttgttgccatgtcta 44615385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 120 - 250
Target Start/End: Original strand, 44793054 - 44793184
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    ||||||||||||||||| |||||  | |||||||||||||||| ||||||||| ||||| |||| |||||| ||||| ||| || | ||  ||| || ||    
T  44793054 tcccatacccgtgtttttaaatcagggaaaacccaaactcatacccaaacccagtcaaaacgggaaaaacccgtcaaattgagtttggtctgggtgggta 44793153  T
Q  220 cccacaggtatgagctttgttgccatgtcta 250  Q
     |||| |||||| | ||||||||||||||||    
T  44793154 accacgggtatgggttttgttgccatgtcta 44793184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 10778607 - 10778531
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 196  Q
    |||||||||||||||||||||||| |||||||  ||||||||| ||||||||| |||||||||  |||||| |||||    
T  10778607 tcccatacccgtgttttgaaatcgggaaaaacttaaactcatacccaaacccagtcaaagcggaaaaaacccgtcaa 10778531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 122 - 246
Target Start/End: Complemental strand, 24236799 - 24236675
Alignment:
Q  122 ccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttacc 221  Q
    ||||||||||||||||| |||| | |||||||| || |||| | ||||||| ||||| |||| |||||| ||||| ||| || | |||||||||| || |    
T  24236799 ccatacccgtgttttgagatcggggaaaacccatacccatacctaaacccagtcaaaacgggaaaaacccgtcaaattgagtttggttcgggcgggtaac 24236700  T
Q  222 cacaggtatgagctttgttgccatg 246  Q
    ||  |||||||| ||||||||||||    
T  24236699 catgggtatgagttttgttgccatg 24236675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 120 - 216
Target Start/End: Original strand, 51421907 - 51422003
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcgg 216  Q
    ||||||||||||||||||| |||| |||||||||| || |||| ||||||||| |||||  ||||||||||  |||| |||||| | ||||||||||    
T  51421907 tcccatacccgtgttttgagatcgggaaaaacccatacccatacccaaacccagtcaaaatggggaaaacccatcaaattgggtttggttcgggcgg 51422003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 203
Target Start/End: Original strand, 16408991 - 16409074
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggt 203  Q
    |||||||||||||||||||||| | | |||||||| || |||| ||||||||| ||||| ||||||||||| ||||| ||||||    
T  16408991 tcccatacccgtgttttgaaattggggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggt 16409074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 231
Target Start/End: Original strand, 34611122 - 34611233
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    ||||||||||||||||||| |||| |||||||||| || |||| |||||  |||||||| ||||||||||| ||||| |||| | | |||| ||||| ||    
T  34611122 tcccatacccgtgttttgagatcgggaaaaacccatacccatacccaaattcaatcaaaacggggaaaacccgtcaaattggatttggttcaggcgggta 34611221  T
Q  220 cccacaggtatg 231  Q
     |||| ||||||    
T  34611222 accacgggtatg 34611233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 246
Target Start/End: Complemental strand, 34673319 - 34673196
Alignment:
Q  123 catacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttaccc 222  Q
    ||||||||||||||||||| | ||||||||||||| |||| ||||||||| | |||  |||||||| | || || |||||| | |||||||||| ||  |    
T  34673319 catacccgtgttttgaaattgggaaaaacccaaacccatacccaaacccagttaaaatggggaaaatccgttaaattgggtttggttcgggcgggtaatc 34673220  T
Q  223 acaggtatgagctttgttgccatg 246  Q
    || |||||||| ||||||| ||||    
T  34673219 actggtatgagttttgttgtcatg 34673196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 61 - 251
Target Start/End: Complemental strand, 49250877 - 49250682
Alignment:
Q  61 ttttttacattcaagacgggtttgggtataggttcagggtggatactt-tatatcc----cccttcccatacccgtgttttgaaatcgagaaaaacccaa 155  Q
    |||||||||||   ||||||||||||||| |||||  ||||||||| | |||| ||    ||| ||||||||||||||||||| |||| | ||||| ||     
T  49250877 ttttttacatttgggacgggtttgggtatgggttcgaggtggatacctatatacccattacccgtcccatacccgtgttttgagatcggggaaaactcat 49250778  T
Q  156 actcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttacccacaggtatgagctttgttgccatgtctaa 251  Q
    || |||| ||||||||| ||||| ||| ||||||| ||||| |||  | | |||||||||| || |||| |||||||  ||||||| |||| ||||    
T  49250777 acccatacccaaacccagtcaaaacggagaaaacccgtcaaattgaatttggttcgggcggataaccacgggtatgaattttgttgtcatgcctaa 49250682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 125 - 224
Target Start/End: Original strand, 2514811 - 2514911
Alignment:
Q  125 tacccgtgttttgaaatcgagaaaaacccaaactcata-tccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttaccca 223  Q
    ||||||||||||||||| | | ||||||||||||||||  ||||||||||||||| |||||||||||  |||| |||||| | ||| || ||| ||||||    
T  2514811 tacccgtgttttgaaattggggaaaacccaaactcataccccaaacccaatcaaaacggggaaaacccatcaagttgggtttggtttggacgggtaccca 2514910  T
Q  224 c 224  Q
    |    
T  2514911 c 2514911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 123 - 246
Target Start/End: Original strand, 17134999 - 17135122
Alignment:
Q  123 catacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttaccc 222  Q
    ||||||||||||||||||||| | |||||||| || || | ||||||||| ||||| | | ||||| | ||||| |||||| | |||||||||| || ||    
T  17134999 catacccgtgttttgaaatcggggaaaacccatacccacacccaaacccagtcaaaacagagaaaatccgtcaaattgggtttggttcgggcgggtaacc 17135098  T
Q  223 acaggtatgagctttgttgccatg 246  Q
     | |||||| | ||||||||||||    
T  17135099 gcgggtatgggttttgttgccatg 17135122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 246
Target Start/End: Original strand, 5181088 - 5181214
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    |||||||||||| ||||||||||| | |||||||| || |||| | ||||||| |||||  |||||||||| ||||| |||  | | |||||||||| ||    
T  5181088 tcccatacccgtattttgaaatcggggaaaacccatacccatacctaaacccagtcaaaatggggaaaacccgtcaaattgaatttggttcgggcgggta 5181187  T
Q  220 cccacaggtatgagctttgttgccatg 246  Q
     || | |||||| | ||||||||||||    
T  5181188 accgcgggtatgggttttgttgccatg 5181214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 246
Target Start/End: Original strand, 12495059 - 12495185
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    ||||||| |||||||||||||||| |||||||| |||| |||| | ||||||| |||||| |||||||| | ||||| |||| | | |||| || || ||    
T  12495059 tcccatatccgtgttttgaaatcgggaaaaaccaaaacccataccgaaacccagtcaaagtggggaaaatccgtcaaattggatttggttcaggtgggta 12495158  T
Q  220 cccacaggtatgagctttgttgccatg 246  Q
     ||||| ||||||  ||||||| ||||    
T  12495159 accacatgtatgaattttgttgtcatg 12495185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 124 - 216
Target Start/End: Original strand, 39616345 - 39616437
Alignment:
Q  124 atacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcgg 216  Q
    |||||||||||||||||| | | |||||||| ||||||| |||||| || ||||| ||||||||||  ||||| ||| || | ||||||||||    
T  39616345 atacccgtgttttgaaataggggaaaacccatactcatacccaaactcagtcaaaacggggaaaactcgtcaaattgagtttggttcgggcgg 39616437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 120 - 251
Target Start/End: Complemental strand, 9982930 - 9982799
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggtta 219  Q
    |||||| ||||||||||||||| | | ||||  |||||||||| ||||||||| ||||| ||| ||||| |  |||| |||| | | ||||||| |  ||    
T  9982930 tcccattcccgtgttttgaaattggggaaaattcaaactcatacccaaacccagtcaaaacggagaaaatccatcaaattggatttggttcgggagagta 9982831  T
Q  220 cccacaggtatgagctttgttgccatgtctaa 251  Q
     |||| |||||||| |||||||||||| ||||    
T  9982830 accacgggtatgagttttgttgccatgcctaa 9982799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 133 - 251
Target Start/End: Complemental strand, 5293432 - 5293315
Alignment:
Q  133 ttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttacccacaggtatga 232  Q
    ||||||||||| || |||||||||||||||  ||||| || ||||||||| ||||||| || || |||||| |||||| ||||| || || || |||||     
T  5293432 ttttgaaatcg-gagaaacccaaactcatactcaaacacagtcaaagcggagaaaacccgttaaattgggtttagttcaggcgggtatccgcatgtatgt 5293334  T
Q  233 gctttgttgccatgtctaa 251  Q
    | ||||||| ||| |||||    
T  5293333 gttttgttgtcatatctaa 5293315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 60 - 246
Target Start/End: Original strand, 29936400 - 29936597
Alignment:
Q  60 attttttacattcaagacgggtttgggtataggttcagggtggatactt-tatatcc----cccttcccatacccgtgttttgaaatcgagaaaaaccca 154  Q
    ||||||||||||   ||||||||||||||| ||||| |||||| ||| | |||| ||    ||| |||||||||||| |||||| |||| | ||||||||    
T  29936400 attttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtattttgagatcggggaaaaccca 29936499  T
Q  155 aactcatatccaaacccaa------tcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttacccacaggtatgagctttgttgccatg 246  Q
     || ||||  || ||||||      ||||| ||||||||||| ||||| |||||| | |||||||||| || |||| |||||| | ||||||| ||||    
T  29936500 tacccatactcatacccaaacttagtcaaaacggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacgggtatgggttttgttgtcatg 29936597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 18354120 - 18354044
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 196  Q
    |||||||||| ||||||||||||| | |||||||| || ||||| |||| ||| ||||| |||| |||||| |||||    
T  18354120 tcccatacccatgttttgaaatcggggaaaacccatacccatattcaaatccagtcaaaacgggaaaaacccgtcaa 18354044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 19003706 - 19003630
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 196  Q
    |||||||||||| ||||| ||||| | ||||||| ||| |||| ||||||| | ||||| ||||||||||| |||||    
T  19003706 tcccatacccgtattttgtaatcggggaaaacccgaacccatacccaaacctagtcaaatcggggaaaacccgtcaa 19003630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 120 - 216
Target Start/End: Complemental strand, 23490811 - 23490715
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcgg 216  Q
    |||||||||||||||| || |||| | |||||||| || |||| ||||||||| ||||| | || |||||| ||||| |||| | | ||||||||||    
T  23490811 tcccatacccgtgtttcgagatcggggaaaacccatacccatacccaaacccagtcaaaacaggaaaaacccgtcaaattggatttggttcgggcgg 23490715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 29871325 - 29871249
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 196  Q
    |||||||||| |||||||||||||   |||||||||||||||| ||||||  | ||||| || |||||||| |||||    
T  29871325 tcccatacccatgttttgaaatcggagaaaacccaaactcatacccaaacttagtcaaaacgaggaaaacccgtcaa 29871249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 246
Target Start/End: Original strand, 20774654 - 20774741
Alignment:
Q  159 catatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttacccacaggtatgagctttgttgccatg 246  Q
    |||| ||||||||| ||||| ||||||||| | ||||| |||||| | |||||||||| || ||||  ||||| | ||||||||||||    
T  20774654 catacccaaacccagtcaaaacggggaaaatccgtcaaattgggtttggttcgggcgggtaaccacgagtatgggttttgttgccatg 20774741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 139 - 190
Target Start/End: Complemental strand, 41476973 - 41476922
Alignment:
Q  139 aatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacc 190  Q
    |||||| |||||||||||||||||| ||||| || |||||||||| ||||||    
T  41476973 aatcgaaaaaaacccaaactcatattcaaactcagtcaaagcgggaaaaacc 41476922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 246
Target Start/End: Complemental strand, 45866222 - 45866100
Alignment:
Q  123 catacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttaccc 222  Q
    ||||||||||||||||||||| | |||||||| || |||| ||||||| | |||||  || ||||||| |||||||| ||| | | |||||||| || ||    
T  45866222 catacccgtgttttgaaatcggggaaaacccatacccatacccaaacctagtcaaa-aggagaaaacccgtcaatttaggtttggctcgggcgggtaacc 45866124  T
Q  223 acaggtatgagctttgttgccatg 246  Q
     |  ||||| | ||||||||||||    
T  45866123 gcgagtatgggttttgttgccatg 45866100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 120 - 178
Target Start/End: Complemental strand, 16237344 - 16237286
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaa 178  Q
    |||| ||||||| ||||||||||| | |||||||||| |||||||||||| || |||||    
T  16237344 tcccttacccgtattttgaaatcggggaaaacccaaattcatatccaaactcagtcaaa 16237286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 120 - 170
Target Start/End: Complemental strand, 35936869 - 35936819
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacc 170  Q
    |||||||| |||| |||||||||| | |||||||||||||||| |||||||    
T  35936869 tcccatactcgtgatttgaaatcggggaaaacccaaactcatacccaaacc 35936819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 133 - 190
Target Start/End: Original strand, 36617423 - 36617481
Alignment:
Q  133 ttttgaaatcgagaaaaacccaaactcatatccaaacccaatc-aaagcggggaaaacc 190  Q
    ||||||||||| | ||||| |||||||||||| |||||||||| ||||| |||||||||    
T  36617423 ttttgaaatcgtggaaaactcaaactcatatctaaacccaatcaaaagcagggaaaacc 36617481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 120 - 178
Target Start/End: Complemental strand, 42707877 - 42707819
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaa 178  Q
    ||||||||||||||||||||||||   ||||| || ||||||| ||||||||| |||||    
T  42707877 tcccatacccgtgttttgaaatcggagaaaactcatactcatacccaaacccagtcaaa 42707819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 125 - 183
Target Start/End: Complemental strand, 42728979 - 42728922
Alignment:
Q  125 tacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggg 183  Q
    ||||| ||||||||||||| |||||||  |||| |||||||||||| ||||||||||||    
T  42728979 tacccatgttttgaaatcgggaaaaacg-aaacccatatccaaaccaaatcaaagcggg 42728922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 164 - 250
Target Start/End: Complemental strand, 47644868 - 47644782
Alignment:
Q  164 ccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttacccacaggtatgagctttgttgccatgtcta 250  Q
    ||||||| |||||||||| | |||||| |||||||| |||   |||||| ||| ||||||||  | |||| ||||||||||||||||    
T  47644868 ccaaacctaatcaaagcgagaaaaacccgtcaatttaggttcggttcggtcgggtacccacaaatttgagttttgttgccatgtcta 47644782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 130 - 246
Target Start/End: Original strand, 13390456 - 13390571
Alignment:
Q  130 gtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttacccacaggta 229  Q
    |||||||||||||| | ||||  || || |||| ||||||||| ||||| ||||| ||||| ||||| |||||| | |||||||||| || ||   ||||    
T  13390456 gtgttttgaaatcggggaaaattcatacccatacccaaacccagtcaaaacgggg-aaacccgtcaaattgggtttggttcgggcgggtaaccgtgggta 13390554  T
Q  230 tgagctttgttgccatg 246  Q
    || | ||||||||||||    
T  13390555 tgggttttgttgccatg 13390571  T

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Target: scaffold0157 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 55 - 199
Target Start/End: Original strand, 14836 - 14975
Alignment:
Q  55 aattgattttttacattcaagacgggtttgggtataggttcagggtggatactttatatcccccttcccatacccgtgttttgaaatcgagaaaaaccca 154  Q
    ||||||| |||||| |||| |||||||||||||||  ||||||||||| ||||  |||||||| ||     |||||||||||||||||| | ||||||||    
T  14836 aattgatgttttaccttcaggacgggtttgggtatgagttcagggtgggtacta-atatccccatt-----acccgtgttttgaaatcggggaaaaccca 14929  T
Q  155 aactcatatcc-aaacccaatcaaagcggggaaaacctgtcaattt 199  Q
    |||||||| || ||||||||||||||||| ||||||| ||||||||    
T  14930 aactcataccctaaacccaatcaaagcggagaaaacccgtcaattt 14975  T

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Target: scaffold0198 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 14 - 159
Target Start/End: Complemental strand, 20890 - 20740
Alignment:
Q  14 agagaacttagagaagtgagtgccgtctaaaaggaataatgaattgattttttacattcaagacgggtttgggtataggttcagggtggatactttatat 113  Q
    ||||||||||||||||||||||  |||||||| ||||||| ||||||||||||||||||   ||||||||| |||| |||||  |||||||| |||||||    
T  20890 agagaacttagagaagtgagtgttgtctaaaacgaataataaattgattttttacattcggaacgggtttgagtatgggttcgaggtggata-tttatat 20792  T
Q  114 cc------cccttcccatacccgtgttttgaaatcgagaaaaacccaaactc 159  Q
    ||      ||| || ||||| || |||||||||||| |||||| ||||||||    
T  20791 ccccattacccgtctcatactcgagttttgaaatcgggaaaaatccaaactc 20740  T

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Target: scaffold0009 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 120 - 190
Target Start/End: Complemental strand, 107431 - 107361
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacc 190  Q
    ||||||||| |||||||||||||||||||||| |||||  ||| | |||||||||||||| ||||||||||    
T  107431 tcccatacctgtgttttgaaatcgagaaaaactcaaacctatacctaaacccaatcaaagtggggaaaacc 107361  T

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Target: scaffold0036 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 33441 - 33494
Alignment:
Q  120 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaa 173  Q
    |||||||||||||||||||||||| | ||||||||||| |||| ||||||||||    
T  33441 tcccatacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaa 33494  T

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Target: scaffold0022 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 123 - 233
Target Start/End: Original strand, 90648 - 90752
Alignment:
Q  123 catacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtagttcgggcggttaccc 222  Q
    ||||||||||||||||||||| | |||||||| ||      ||||||||| ||||| ||||||||| | ||||| ||| || |||||||||||| || ||    
T  90648 catacccgtgttttgaaatcggggaaaacccatac------ccaaacccagtcaaaacggggaaaatccgtcaaattgagtttagttcgggcgggtaacc 90741  T
Q  223 acaggtatgag 233  Q
    || ||||||||    
T  90742 acgggtatgag 90752  T

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Target: scaffold0184 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 125 - 178
Target Start/End: Original strand, 3022 - 3075
Alignment:
Q  125 tacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaa 178  Q
    ||||||| ||||||||||| | |||||||||||||||| ||||||||| |||||    
T  3022 tacccgtattttgaaatcggggaaaacccaaactcatacccaaacccagtcaaa 3075  T

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Target: scaffold0189 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 123 - 153
Target Start/End: Original strand, 4309 - 4339
Alignment:
Q  123 catacccgtgttttgaaatcgagaaaaaccc 153  Q
    |||||||||||||||||||||||||||||||    
T  4309 catacccgtgttttgaaatcgagaaaaaccc 4339  T

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Target: scaffold0008 (Bit Score: 29; Significance: 0.0000009; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 128 - 196
Target Start/End: Original strand, 67805 - 67873
Alignment:
Q  128 ccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 196  Q
    |||| |||| |||||| | |||| |||||| ||||  |||||||| ||||| |||||||||||||||||    
T  67805 ccgtattttaaaatcggggaaaatccaaacccatactcaaacccagtcaaatcggggaaaacctgtcaa 67873  T

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Target: scaffold0008; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 128 - 196
Target Start/End: Original strand, 75648 - 75716
Alignment:
Q  128 ccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaa 196  Q
    |||| |||| |||||| | |||| |||||| ||||  |||||||| ||||| |||||||||||||||||    
T  75648 ccgtattttaaaatcggggaaaatccaaacccatactcaaacccagtcaaatcggggaaaacctgtcaa 75716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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