View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19129_high_9 (Length: 245)
Name: NF19129_high_9
Description: NF19129
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19129_high_9 |
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Alignment Details
Target: chr2 (Bit Score: 231; Significance: 1e-128; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 231; E-Value: 1e-128
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 2834613 - 2834383
Alignment:
| Q |
1 |
gttgctaaatccaactgtcacaacacaaaaagattgcgaaagctacttaataagctaagggaaatcggttatatgcataaaaatcagatactgcaaatta |
100 |
Q |
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| T |
2834613 |
gttgctaaatccaactgtcacaacacaaaaagattgcgaaagctacttaataagctaagggaaatcggttatatgcataaaaatcagatactgcaaatta |
2834514 |
T |
|
| Q |
101 |
gattataggattggaaaatgatttgcttacaataagaaccaagaaagtggcagcaaagaaaagtgtgaatccagccaaatttcgcagtctagtattgatc |
200 |
Q |
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| T |
2834513 |
gattataggattggaaaatgatttgcttacaataagaaccaagaaagtggcagcaaagaaaagtgtgaatccagccaaatttcgcagtctagtattgatc |
2834414 |
T |
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| Q |
201 |
tttgactcatagtatgtgagtattactattg |
231 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
2834413 |
tttgactcatagtatgtgagtattactattg |
2834383 |
T |
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