View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19132_high_15 (Length: 201)

Name: NF19132_high_15
Description: NF19132
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19132_high_15
NF19132_high_15
[»] chr3 (1 HSPs)
chr3 (1-68)||(8431619-8431686)


Alignment Details
Target: chr3 (Bit Score: 64; Significance: 3e-28; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 8431619 - 8431686
Alignment:
1 gcatacccctgcatcaacactcataacagccaaaactgcagcaccacaccaaaaagacagcagcaacc 68  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
8431619 gcatacccctgcatcaacactcataacagccaaaactacagcaccacaccaaaaagacagcagcaacc 8431686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University