View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19133_low_5 (Length: 562)
Name: NF19133_low_5
Description: NF19133
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19133_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 509; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 509; E-Value: 0
Query Start/End: Original strand, 15 - 543
Target Start/End: Complemental strand, 43672735 - 43672207
Alignment:
| Q |
15 |
gagcagagagtggcatagatggaattttagggaaccttttcaaaacttcattatcatccaaactcaacttctcactaccttcaacactaccccaaccagg |
114 |
Q |
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| T |
43672735 |
gagcagagagtggcatagatggaattttagggaaccttttcaaaacttcattatcatccaaactcaacttctcactaccttcaacactaccccaaccagg |
43672636 |
T |
|
| Q |
115 |
actaagtgggtcccctacacctttcatcacgtgacctctctcaaacccatcacgccacgtgtcattctcatcattataaaccagaaccgctacagcaccg |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
43672635 |
actaagtgggtcccctacacctttcatcacgtgacctctctcaaacccattacgccacgtgtcattctcatcattataaactagaaccgctacagcaccg |
43672536 |
T |
|
| Q |
215 |
ttttcctcagccttttcaaccaccgtgttcctccctaaaccaccaccttttcttactatcactatacatcccttaatgcttacgccaactgcacggtagt |
314 |
Q |
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| T |
43672535 |
ttttcctcagccttttcaaccaccgtgttcctccctaaaccaccaccttttcttactatcactatacatcccttaatgcttacgccaactgcacggtagt |
43672436 |
T |
|
| Q |
315 |
ctctatctcttccgtagttcacaaacaccgccttagcataaactgaaccggatggtgagtaagcatggtaggcatgaaccatgtctgaaccggatgaacc |
414 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| |
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| T |
43672435 |
ctctatctcttccgtagttcacaaacaccgccttagcataaactgaaccggatggtgaataagcatggtaggcatgaaccatgtctgaaccagatgaacc |
43672336 |
T |
|
| Q |
415 |
cggttcggttaatccaaggttggaagatgaaccatcgttaaagtgcatggagagtgaagagtgtaatggataagagagaagaacgttgtaagatgttgtg |
514 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43672335 |
cggttcggttaatccaaggttggaagatgaaccatcgttaaagtgcatggagagtgaagagtgtaatggataagagagaagaacgttgtaagatgttgtg |
43672236 |
T |
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| Q |
515 |
tgggttttaaggtttaaggaagtgaagtg |
543 |
Q |
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| T |
43672235 |
tgggttttaaggtttaaggaaatgaagtg |
43672207 |
T |
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