View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19133_low_9 (Length: 474)

Name: NF19133_low_9
Description: NF19133
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19133_low_9
NF19133_low_9
[»] chr2 (28 HSPs)
chr2 (10-459)||(28624021-28624450)
chr2 (10-160)||(28623047-28623197)
chr2 (254-332)||(34635921-34635999)
chr2 (254-379)||(22535455-22535580)
chr2 (254-332)||(12693574-12693654)
chr2 (254-332)||(19641447-19641526)
chr2 (254-332)||(19820078-19820158)
chr2 (254-332)||(19840040-19840119)
chr2 (254-332)||(19840299-19840379)
chr2 (254-332)||(18555577-18555656)
chr2 (254-332)||(34635707-34635785)
chr2 (254-332)||(37147552-37147629)
chr2 (254-329)||(17328093-17328168)
chr2 (254-326)||(22535668-22535739)
chr2 (278-326)||(28149651-28149699)
chr2 (180-212)||(28623198-28623230)
chr2 (274-326)||(30180866-30180918)
chr2 (278-332)||(7894178-7894233)
chr2 (254-332)||(25227824-25227903)
chr2 (265-332)||(35337114-35337181)
chr2 (278-324)||(776300-776346)
chr2 (278-312)||(29949869-29949903)
chr2 (278-332)||(33941202-33941255)
chr2 (254-331)||(37200348-37200423)
chr2 (254-311)||(22116156-22116212)
chr2 (254-334)||(22829315-22829394)
chr2 (347-379)||(34428794-34428826)
chr2 (254-330)||(34428846-34428921)
[»] chr6 (16 HSPs)
chr6 (10-240)||(14649458-14649688)
chr6 (253-332)||(31851972-31852050)
chr6 (278-332)||(14487791-14487845)
chr6 (278-322)||(16659538-16659581)
chr6 (254-332)||(25400755-25400834)
chr6 (278-332)||(3593365-3593419)
chr6 (278-312)||(18591145-18591179)
chr6 (278-332)||(21226749-21226803)
chr6 (278-332)||(33561750-33561804)
chr6 (278-323)||(13552632-13552676)
chr6 (253-321)||(19325613-19325681)
chr6 (278-331)||(25567726-25567779)
chr6 (254-332)||(13497934-13498014)
chr6 (278-334)||(27967677-27967732)
chr6 (254-310)||(29942444-29942499)
chr6 (278-322)||(32603511-32603554)
[»] chr8 (32 HSPs)
chr8 (10-240)||(6763746-6763976)
chr8 (254-332)||(25277684-25277762)
chr8 (254-332)||(3912257-3912335)
chr8 (254-332)||(3912460-3912536)
chr8 (254-333)||(960475-960553)
chr8 (254-332)||(25277473-25277552)
chr8 (278-332)||(41565486-41565541)
chr8 (254-379)||(10710509-10710637)
chr8 (254-333)||(29309566-29309645)
chr8 (254-333)||(16093609-16093687)
chr8 (254-332)||(24970964-24971042)
chr8 (254-312)||(27543412-27543470)
chr8 (347-379)||(12330496-12330528)
chr8 (254-333)||(14329577-14329656)
chr8 (254-326)||(24971162-24971234)
chr8 (347-379)||(26447513-26447545)
chr8 (254-332)||(41565271-41565350)
chr8 (278-327)||(10761449-10761499)
chr8 (278-332)||(11105795-11105849)
chr8 (278-332)||(21692423-21692477)
chr8 (278-333)||(23428760-23428817)
chr8 (254-332)||(27987298-27987375)
chr8 (254-332)||(28044600-28044677)
chr8 (278-311)||(4482069-4482102)
chr8 (279-332)||(13759501-13759554)
chr8 (265-332)||(18367238-18367306)
chr8 (278-332)||(29309751-29309807)
chr8 (254-332)||(9513829-9513908)
chr8 (278-322)||(30222077-30222120)
chr8 (347-379)||(34985281-34985313)
chr8 (253-332)||(38500283-38500363)
chr8 (347-379)||(40770687-40770719)
[»] chr3 (24 HSPs)
chr3 (254-379)||(7118088-7118216)
chr3 (254-332)||(49880504-49880582)
chr3 (254-332)||(8355545-8355623)
chr3 (254-332)||(20956944-20957022)
chr3 (254-332)||(49880715-49880793)
chr3 (254-331)||(30586163-30586241)
chr3 (254-326)||(27760290-27760361)
chr3 (278-332)||(7118298-7118350)
chr3 (253-331)||(29313788-29313866)
chr3 (254-332)||(3548334-3548412)
chr3 (254-332)||(9322120-9322197)
chr3 (254-332)||(49872928-49873005)
chr3 (278-323)||(14004256-14004300)
chr3 (254-330)||(6510216-6510290)
chr3 (347-379)||(25109926-25109958)
chr3 (254-332)||(51252050-51252127)
chr3 (254-332)||(51252262-51252341)
chr3 (254-304)||(5205117-5205167)
chr3 (254-304)||(5205361-5205411)
chr3 (278-332)||(23388747-23388801)
chr3 (278-323)||(23626225-23626270)
chr3 (254-331)||(25110040-25110117)
chr3 (254-302)||(4699976-4700024)
chr3 (347-379)||(27497888-27497920)
[»] chr4 (23 HSPs)
chr4 (254-332)||(21246477-21246556)
chr4 (254-330)||(18320676-18320752)
chr4 (254-379)||(51965373-51965499)
chr4 (254-332)||(5401976-5402054)
chr4 (254-379)||(21246639-21246767)
chr4 (255-328)||(27579516-27579588)
chr4 (253-332)||(13334822-13334902)
chr4 (278-332)||(46094218-46094273)
chr4 (254-332)||(21780123-21780200)
chr4 (254-325)||(18454193-18454265)
chr4 (253-332)||(27579722-27579801)
chr4 (347-379)||(46119695-46119727)
chr4 (347-379)||(46132829-46132861)
chr4 (278-327)||(12388109-12388160)
chr4 (254-301)||(18454439-18454486)
chr4 (278-332)||(20514680-20514734)
chr4 (265-322)||(49296014-49296071)
chr4 (278-332)||(51353248-51353301)
chr4 (254-326)||(16493519-16493591)
chr4 (278-327)||(33316710-33316758)
chr4 (254-326)||(44519458-44519530)
chr4 (347-379)||(17800912-17800944)
chr4 (274-310)||(54130533-54130569)
[»] scaffold0769 (2 HSPs)
scaffold0769 (254-332)||(3915-3993)
scaffold0769 (254-332)||(4129-4207)
[»] scaffold0018 (1 HSPs)
scaffold0018 (10-83)||(127736-127809)
[»] chr7 (29 HSPs)
chr7 (254-332)||(20041113-20041192)
chr7 (256-332)||(39065386-39065461)
chr7 (253-332)||(13797589-13797668)
chr7 (254-332)||(5766639-5766717)
chr7 (254-332)||(20040900-20040979)
chr7 (274-379)||(43251533-43251638)
chr7 (254-379)||(44414010-44414133)
chr7 (278-332)||(35264458-35264512)
chr7 (254-332)||(38192963-38193040)
chr7 (254-331)||(23784585-23784661)
chr7 (254-331)||(16902107-16902182)
chr7 (254-326)||(23371450-23371521)
chr7 (347-379)||(34857677-34857709)
chr7 (254-334)||(39580143-39580222)
chr7 (254-332)||(13279185-13279263)
chr7 (265-332)||(24374279-24374346)
chr7 (254-379)||(24845639-24845766)
chr7 (348-379)||(29141050-29141081)
chr7 (278-312)||(2240873-2240907)
chr7 (254-304)||(13797417-13797467)
chr7 (275-313)||(34010781-34010819)
chr7 (278-334)||(31534136-31534192)
chr7 (278-322)||(2301130-2301173)
chr7 (278-332)||(15037281-15037337)
chr7 (347-379)||(24362258-24362290)
chr7 (278-333)||(29141008-29141064)
chr7 (278-322)||(30335371-30335415)
chr7 (278-322)||(32946560-32946603)
chr7 (254-330)||(48104709-48104784)
[»] chr1 (22 HSPs)
chr1 (278-332)||(23889701-23889756)
chr1 (254-330)||(18458784-18458858)
chr1 (254-333)||(28797160-28797240)
chr1 (254-332)||(27794359-27794436)
chr1 (158-211)||(9953535-9953588)
chr1 (254-329)||(2472391-2472466)
chr1 (254-332)||(10027954-10028033)
chr1 (278-330)||(42736802-42736854)
chr1 (254-320)||(24987609-24987674)
chr1 (253-334)||(2472561-2472641)
chr1 (254-311)||(8620192-8620249)
chr1 (278-322)||(22387169-22387212)
chr1 (254-333)||(30659385-30659464)
chr1 (254-332)||(22604640-22604718)
chr1 (278-332)||(35034274-35034328)
chr1 (254-331)||(15790452-15790529)
chr1 (254-333)||(30659519-30659597)
chr1 (254-333)||(7112495-7112574)
chr1 (278-322)||(21771030-21771073)
chr1 (347-379)||(25235865-25235897)
chr1 (254-326)||(28411132-28411204)
chr1 (280-332)||(39160460-39160512)
[»] chr5 (23 HSPs)
chr5 (254-332)||(10976726-10976803)
chr5 (254-331)||(39418930-39419008)
chr5 (254-332)||(711238-711317)
chr5 (254-332)||(9227062-9227141)
chr5 (254-332)||(33658871-33658950)
chr5 (278-332)||(33659084-33659138)
chr5 (254-312)||(39153417-39153475)
chr5 (278-332)||(36992961-36993016)
chr5 (254-333)||(2870863-2870940)
chr5 (347-378)||(22642214-22642245)
chr5 (278-332)||(31861515-31861570)
chr5 (278-333)||(40339515-40339569)
chr5 (278-332)||(2724508-2724561)
chr5 (278-324)||(6117887-6117933)
chr5 (254-300)||(18229750-18229796)
chr5 (278-332)||(28277440-28277494)
chr5 (254-304)||(29754049-29754099)
chr5 (278-312)||(31920344-31920378)
chr5 (278-323)||(27331177-27331221)
chr5 (265-332)||(9673107-9673175)
chr5 (278-334)||(18811151-18811207)
chr5 (347-379)||(24098528-24098560)
chr5 (254-306)||(33053051-33053103)
[»] scaffold0142 (2 HSPs)
scaffold0142 (254-332)||(34805-34882)
scaffold0142 (278-332)||(34594-34648)
[»] scaffold0450 (1 HSPs)
scaffold0450 (254-326)||(8080-8151)
[»] scaffold0031 (1 HSPs)
scaffold0031 (254-331)||(2038-2116)
[»] scaffold0019 (1 HSPs)
scaffold0019 (278-332)||(174583-174636)
[»] scaffold0289 (1 HSPs)
scaffold0289 (278-322)||(6750-6793)
[»] scaffold0010 (1 HSPs)
scaffold0010 (254-332)||(26309-26387)
[»] scaffold0009 (2 HSPs)
scaffold0009 (265-332)||(149998-150065)
scaffold0009 (265-332)||(150203-150271)
[»] scaffold0740 (1 HSPs)
scaffold0740 (278-332)||(3671-3725)
[»] scaffold0068 (1 HSPs)
scaffold0068 (278-310)||(38636-38668)
[»] scaffold0032 (1 HSPs)
scaffold0032 (254-326)||(91051-91122)
[»] scaffold0002 (1 HSPs)
scaffold0002 (278-322)||(332089-332132)


Alignment Details
Target: chr2 (Bit Score: 212; Significance: 1e-116; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 10 - 459
Target Start/End: Original strand, 28624021 - 28624450
Alignment:
Q  10 attattctaactttaaattcaattgtattcagtttggctttaaaagtctcacattcctccggagatatcaagctttcgtaaatggttggacgatcaacat 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  28624021 attattctaactttaaattcaattgtattcagtttggctttaaaagtctcccattcctccggagatatcaagctttcgtaaagggttggacgatcaacat 28624120  T
Q  110 ctataaaattttcatcaacatctctaagatacttcgttgttaaataagatcgaaaacatctatataattttccagcaagttgaagtacatatttcttccg 209  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||                   ||||||||||||||||||||||||||||||    
T  28624121 ctataaaatttccatcaacatctctaagatacttcgttgttaaataagatc-------------------tccagcaagttgaagtacatatttcttccg 28624201  T
Q  210 tgattcatcttcattaaggaaataactctac-----nnnnnnnnnnnntggttaatacgtctttacacacctctaatataggtcatttccggttttcccc 304  Q
    |||||||||||||||||||||||||||||||                 ||||||||| ||||||||||||||||||||||| ||||||||||||| ||||    
T  28624202 tgattcatcttcattaaggaaataactctacaaaataaaaaaaaaaaatggttaataggtctttacacacctctaatatagatcatttccggtttccccc 28624301  T
Q  305 ttgtaaaaatatttttttgatttacccctgcaa---nnnnnnnnngttttgattta-cccctaataggccaaacaaaaaagtataacattatatcagaca 400  Q
             | ||||||||||||||||||| ||            ||||||||||| |||||||||| |||||| ||||| |||||||||||||||||||    
T  28624302 ---------tgtttttttgatttacccctgtaattttttttttttgttttgatttaccccctaatagaccaaac-aaaaattataacattatatcagaca 28624391  T
Q  401 aattctcccacacctagaaaaattaagcttaagacattctactccctaacacacagatt 459  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28624392 aattctcccacacctagaaaaattaagcttaagacattctactccctaacacacagatt 28624450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 10 - 160
Target Start/End: Original strand, 28623047 - 28623197
Alignment:
Q  10 attattctaactttaaattcaattgtattcagtttggctttaaaagtctcacattcctccggagatatcaagctttcgtaaatggttggacgatcaacat 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  28623047 attattctaactttaaattcaattgtattcagtttggctttaaaagtctcccattcctccggagatatcaagctttcgtaaagggttggacgatcaacat 28623146  T
Q  110 ctataaaattttcatcaacatctctaagatacttcgttgttaaataagatc 160  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  28623147 ctataaaatttccatcaacatctctaagatacttcgttgttaaataagatc 28623197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 254 - 332
Target Start/End: Complemental strand, 34635999 - 34635921
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttccccttgtaaaaatatttttttgatttacccc 332  Q
    |||||||| |||||||| | ||| ||||||||||||||||||||||||||| |||||||   |||||||||||||||||    
T  34635999 ggttaataggtctttacccccctgtaatataggtcatttccggttttccccctgtaaaatattttttttgatttacccc 34635921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 254 - 379
Target Start/End: Original strand, 22535455 - 22535580
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttccccttgtaaaaatatttttttgatttacccctgcaannnnnnnnngttttga 353  Q
    |||||||| |||||||| | ||| ||||||||||||||| ||||||| ||||||||||| | || || ||||||||||||  ||         |||||||    
T  22535455 ggttaataggtctttaccc-cctttaatataggtcattttcggtttttcccttgtaaaatttttattctgatttacccctataaaatatttttgttttga 22535553  T
Q  354 tttaccc-ctaataggccaaacaaaaa 379  Q
    ||||||| |||||||||||||||||||    
T  22535554 tttaccctctaataggccaaacaaaaa 22535580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 254 - 332
Target Start/End: Original strand, 12693574 - 12693654
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccgg-ttttcccct-tgtaaaaatatttttttgatttacccc 332  Q
    |||||||| |||||||||| | | ||||||||||||||| ||| ||||||||| |||||||  ||||||||||||||||||    
T  12693574 ggttaatatgtctttacacccttgtaatataggtcattttcggtttttcccctctgtaaaataatttttttgatttacccc 12693654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 254 - 332
Target Start/End: Original strand, 19641447 - 19641526
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttcc-ccttgtaaaaata-tttttttgatttacccc 332  Q
    |||||||| |||||||| | ||| ||||||||||||||||||||||||| || ||||||| || |||||||||||||||||    
T  19641447 ggttaataggtctttaccc-cctgtaatataggtcatttccggttttccaccctgtaaaattattttttttgatttacccc 19641526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 254 - 332
Target Start/End: Complemental strand, 19820158 - 19820078
Alignment:
Q  254 ggttaatacgtctttacacacc-tctaatataggtcatttccgg-ttttccccttgtaaaaatatttttttgatttacccc 332  Q
    |||||||| |||||||| | || | ||||||| ||||||||||| |||||||| ||||||| |||||||||||||||||||    
T  19820158 ggttaataggtctttaccccccctgtaatatatgtcatttccgggttttccccctgtaaaattatttttttgatttacccc 19820078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 254 - 332
Target Start/End: Original strand, 19840040 - 19840119
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttcc-ccttgtaaaaata-tttttttgatttacccc 332  Q
    |||||||| |||||||| | ||| ||||||||||||||||||||||||| || ||||||| || |||||||||||||||||    
T  19840040 ggttaataggtctttaccc-cctgtaatataggtcatttccggttttccaccctgtaaaattattttttttgatttacccc 19840119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 254 - 332
Target Start/End: Complemental strand, 19840379 - 19840299
Alignment:
Q  254 ggttaatacgtctttacacacc-tctaatataggtcatttccgg-ttttccccttgtaaaaatatttttttgatttacccc 332  Q
    |||||||| |||||||| | || | ||||||| ||||||||||| |||||||| ||||||| |||||||||||||||||||    
T  19840379 ggttaataggtctttaccccccctgtaatatatgtcatttccgggttttccccctgtaaaattatttttttgatttacccc 19840299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 254 - 332
Target Start/End: Original strand, 18555577 - 18555656
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccgg-ttttccccttgtaaaaatatttttttgatttacccc 332  Q
    |||||||| |||||||| | ||| ||||||| ||||||||||| ||||  |||||||||| ||||||||| |||||||||    
T  18555577 ggttaataggtctttacccccctgtaatataagtcatttccggttttttaccttgtaaaattattttttttatttacccc 18555656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 254 - 332
Target Start/End: Original strand, 34635707 - 34635785
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggtttt-ccccttgtaaaaatatttttttgatttacccc 332  Q
    |||||||| |||||||| | ||| ||||||||||||||||||||||| |||| |||||||   |||||||||||||||||    
T  34635707 ggttaataggtctttaccc-cctgtaatataggtcatttccggttttcccccctgtaaaatattttttttgatttacccc 34635785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 332
Target Start/End: Original strand, 37147552 - 37147629
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttccccttgtaaaaatatttttttgatttacccc 332  Q
    |||||||| |||||||| | ||| ||||||||||||||||||||||||||| || |||| | || |||||||| |||||    
T  37147552 ggttaataggtctttaccc-cctgtaatataggtcatttccggttttccccctgcaaaatttttattttgattcacccc 37147629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 329
Target Start/End: Original strand, 17328093 - 17328168
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggtttt-ccccttgtaaaaatatttttttgatttac 329  Q
    |||||||| |||||||| | ||| ||||||||||||||||||||||| |||| ||||||| | || |||||||||||    
T  17328093 ggttaataggtctttaccc-cctgtaatataggtcatttccggttttcccccctgtaaaatttttattttgatttac 17328168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 326
Target Start/End: Complemental strand, 22535739 - 22535668
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttccccttgtaaaaatatttttttgatt 326  Q
    |||||||| |||||||| | ||| |||||||||||||||| |||||||||| ||||||| | || ||||||||    
T  22535739 ggttaataggtctttac-ctcctgtaatataggtcatttctggttttccccctgtaaaatttttattttgatt 22535668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 278 - 326
Target Start/End: Complemental strand, 28149699 - 28149651
Alignment:
Q  278 taatataggtcatttccggttttccccttgtaaaaatatttttttgatt 326  Q
    ||||||||||||||||||||||||||| ||||||| | || ||||||||    
T  28149699 taatataggtcatttccggttttccccctgtaaaatttttattttgatt 28149651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 28623198 - 28623230
Alignment:
Q  180 tccagcaagttgaagtacatatttcttccgtga 212  Q
    |||||||||||||||||||||||||||||||||    
T  28623198 tccagcaagttgaagtacatatttcttccgtga 28623230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 274 - 326
Target Start/End: Complemental strand, 30180918 - 30180866
Alignment:
Q  274 cctctaatataggtcatttccggttttccccttgtaaaaatatttttttgatt 326  Q
    ||||||||||||||||||||||||||| ||| ||||||| | || ||||||||    
T  30180918 cctctaatataggtcatttccggtttttcccctgtaaaatttttattttgatt 30180866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 278 - 332
Target Start/End: Complemental strand, 7894233 - 7894178
Alignment:
Q  278 taatataggtcatttccggttttccc-cttgtaaaaatatttttttgatttacccc 332  Q
    |||||||||||||||||||||||||| | ||||||| | ||||||| |||||||||    
T  7894233 taatataggtcatttccggttttccctcctgtaaaatttttttttttatttacccc 7894178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 332
Target Start/End: Original strand, 25227824 - 25227903
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggtttt-ccccttgtaaaaatatttttttgatttacccc 332  Q
    |||||||| |||||||| | ||| |||||||||||||||| |||||| |||| |||||||   ||||||| |||||||||    
T  25227824 ggttaataggtctttaccctcctgtaatataggtcatttctggttttcccccctgtaaaatatttttttttatttacccc 25227903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 332
Target Start/End: Complemental strand, 35337181 - 35337114
Alignment:
Q  265 ctttacacacctctaatataggtcatttccggttttccccttgtaaaaatatttttttgatttacccc 332  Q
    |||||| | ||| |||||||||||||||  |||||| ||| |||||||  ||||||||||||||||||    
T  35337181 ctttacccccctgtaatataggtcatttttggtttttcccctgtaaaataatttttttgatttacccc 35337114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 324
Target Start/End: Original strand, 776300 - 776346
Alignment:
Q  278 taatataggtcatttccggttttccccttgtaaaaatatttttttga 324  Q
    ||||||||||||||||| ||||||||| ||||||| | |||||||||    
T  776300 taatataggtcatttccagttttccccctgtaaaattttttttttga 776346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 312
Target Start/End: Complemental strand, 29949903 - 29949869
Alignment:
Q  278 taatataggtcatttccggttttccccttgtaaaa 312  Q
    ||||||||||||||||||||||||||| |||||||    
T  29949903 taatataggtcatttccggttttccccctgtaaaa 29949869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 332
Target Start/End: Original strand, 33941202 - 33941255
Alignment:
Q  278 taatataggtcatttccggttttccccttgtaaaaatatttttttgatttacccc 332  Q
    |||||||||||||||||| |||||||| |||||||   |||||||||||||||||    
T  33941202 taatataggtcatttccgattttcccc-tgtaaaatattttttttgatttacccc 33941255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 331
Target Start/End: Original strand, 37200348 - 37200423
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttccccttgtaaaaatatttttttgatttaccc 331  Q
    |||||||| |||||||| |  || ||||||||||||||| ||||||||| | ||||||| | ||||||||||| ||||    
T  37200348 ggttaataggtctttaccc--ctgtaatataggtcattttcggttttcctcctgtaaaattttttttttgattaaccc 37200423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 311
Target Start/End: Original strand, 22116156 - 22116212
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttccccttgtaaa 311  Q
    |||||||| |||||||| | ||| ||||||||||||||| ||||||||||| ||||||    
T  22116156 ggttaataggtctttaccc-cctgtaatataggtcattttcggttttccccctgtaaa 22116212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 254 - 334
Target Start/End: Complemental strand, 22829394 - 22829315
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttccccttgtaaaaatatttttttgatttacccctg 334  Q
    |||||||| |||||||  | ||| ||||||| |||||||||| |||| || ||||||||   |||||||||||||||||||    
T  22829394 ggttaataggtctttatcctcctgtaatataagtcatttccgatttttcc-ttgtaaaatattttttttgatttacccctg 22829315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 347 - 379
Target Start/End: Complemental strand, 34428826 - 34428794
Alignment:
Q  347 gttttgatttacccctaataggccaaacaaaaa 379  Q
    |||||||||||||||||||| ||||||||||||    
T  34428826 gttttgatttacccctaataagccaaacaaaaa 34428794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 254 - 330
Target Start/End: Complemental strand, 34428921 - 34428846
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttccccttgtaaaaatatttttttgatttacc 330  Q
    |||||||| |||||||| | ||| |||||||||||||||||||||||  |  |||||||   |||||||||||||||    
T  34428921 ggttaataggtctttac-ctcctataatataggtcatttccggttttttctctgtaaaatattttttttgatttacc 34428846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 155; Significance: 4e-82; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 10 - 240
Target Start/End: Original strand, 14649458 - 14649688
Alignment:
Q  10 attattctaactttaaattcaattgtattcagtttggctttaaaagtctcacattcctccggagatatcaagctttcgtaaatggttggacgatcaacat 109  Q
    |||||||||||||||||||||   |||||| |||| |||||||||||||| |||||||||||||||||||||||||||||||  |||||||||||| |||    
T  14649458 attattctaactttaaattcaggagtattccgtttagctttaaaagtctcccattcctccggagatatcaagctttcgtaaagtgttggacgatcagcat 14649557  T
Q  110 ctataaaattttcatcaacatctctaagatacttcgttgttaaataagatcgaaaacatctatataattttccagcaagttgaagtacatatttcttccg 209  Q
    ||| ||||||| ||||| ||||| | |||||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  14649558 ctacaaaatttccatcagcatctttgagatactttgctgttaaataagatcgaaaacatctatgtaattttccagcaagttgaagtacatatttcttccg 14649657  T
Q  210 tgattcatcttcattaaggaaataactctac 240  Q
    |||||||||  ||||||||||||||||||||    
T  14649658 tgattcatcaacattaaggaaataactctac 14649688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 253 - 332
Target Start/End: Complemental strand, 31852050 - 31851972
Alignment:
Q  253 tggttaatacgtctttacacacctctaatataggtcatttccggttttccccttgtaaaaatatttttttgatttacccc 332  Q
    ||||||||| |||||||| | ||| ||||||||||||||| ||||||||||| ||| ||||||||||||| |||||||||    
T  31852050 tggttaataggtctttacccccctgtaatataggtcattttcggttttccccctgt-aaaatattttttttatttacccc 31851972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 278 - 332
Target Start/End: Complemental strand, 14487845 - 14487791
Alignment:
Q  278 taatataggtcatttccggttttcccct-tgtaaaaatatttttttgatttacccc 332  Q
    |||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||    
T  14487845 taatataggtcatttccgattttcccctatgt-aaaatatttttttgatttacccc 14487791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 278 - 322
Target Start/End: Original strand, 16659538 - 16659581
Alignment:
Q  278 taatataggtcatttccggttttccccttgtaaaaatattttttt 322  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||    
T  16659538 taatataggtcatttccggttttccccctgt-aaaatattttttt 16659581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 332
Target Start/End: Complemental strand, 25400834 - 25400755
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttcc-ccttgtaaaaatatttttttgatttacccc 332  Q
    |||||||| |||||||| | | | ||||||||||||||| |||||||||  | | ||||| |||||||||||||||||||    
T  25400834 ggttaataggtctttacccccttgtaatataggtcattttcggttttccatcctataaaattatttttttgatttacccc 25400755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 332
Target Start/End: Original strand, 3593365 - 3593419
Alignment:
Q  278 taatataggtcatttccggttttccccttgtaaaaatatttttttgatttacccc 332  Q
    |||||||||||||||| ||||||||| |||||||| | || |||||||| |||||    
T  3593365 taatataggtcatttctggttttccctttgtaaaatttttattttgattcacccc 3593419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 312
Target Start/End: Original strand, 18591145 - 18591179
Alignment:
Q  278 taatataggtcatttccggttttccccttgtaaaa 312  Q
    ||||||||||||||||||||||||||| |||||||    
T  18591145 taatataggtcatttccggttttccccctgtaaaa 18591179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 332
Target Start/End: Original strand, 21226749 - 21226803
Alignment:
Q  278 taatataggtcatttccggttttccccttgtaaaaatatttttttgatttacccc 332  Q
    |||||||||||||||  |||||||||| |||||||   |||||||||||||||||    
T  21226749 taatataggtcattttgggttttccccctgtaaaatattttttttgatttacccc 21226803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 332
Target Start/End: Original strand, 33561750 - 33561804
Alignment:
Q  278 taatataggtcatttccggttttccccttgtaaaaatatttttttgatttacccc 332  Q
    |||||||||| ||||| |||||||||| |||||||   |||||||||||||||||    
T  33561750 taatataggttatttctggttttccccctgtaaaatattttttttgatttacccc 33561804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 323
Target Start/End: Original strand, 13552632 - 13552676
Alignment:
Q  278 taatataggtcatttccggttttccccttgtaaaaatatttttttg 323  Q
    |||||||||||||||||||||| |||| ||| ||||||||||||||    
T  13552632 taatataggtcatttccggtttcccccctgt-aaaatatttttttg 13552676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 321
Target Start/End: Original strand, 19325613 - 19325681
Alignment:
Q  253 tggttaatacgtctttacacacctctaatataggtcatttccggttttccccttgtaaaa-atatttttt 321  Q
    ||||||||| |||||||| | ||| |||| ||| |||||||||||||||||| ||||||| |||||||||    
T  19325613 tggttaataggtctttaccc-cctgtaatttagatcatttccggttttccccctgtaaaatatatttttt 19325681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 331
Target Start/End: Original strand, 25567726 - 25567779
Alignment:
Q  278 taatataggtcatttccggttttccccttgtaaaaatatttttttgatttaccc 331  Q
    |||||||||||||||  |||||||||| |||||||   ||||||||||||||||    
T  25567726 taatataggtcatttttggttttccccctgtaaaatattttttttgatttaccc 25567779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 254 - 332
Target Start/End: Complemental strand, 13498014 - 13497934
Alignment:
Q  254 ggttaatacgtctttacacacc-tctaatataggtcatttccggtttt-ccccttgtaaaaatatttttttgatttacccc 332  Q
    |||||||| |||||||| | || | |||||||||||||||| | |||| ||||||||||||   |||||||||||||||||    
T  13498014 ggttaataggtctttaccccccctgtaatataggtcatttctgatttttccccttgtaaaatattttttttgatttacccc 13497934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 278 - 334
Target Start/End: Complemental strand, 27967732 - 27967677
Alignment:
Q  278 taatataggtcatttccggttttccccttgtaaaaatatttttttgatttacccctg 334  Q
    |||||||| ||||||   ||||||||| ||||||| |||||||||||||||||||||    
T  27967732 taatatagatcattttttgttttccccctgtaaaa-tatttttttgatttacccctg 27967677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 254 - 310
Target Start/End: Complemental strand, 29942499 - 29942444
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttccccttgtaa 310  Q
    |||||||| |||||||| | ||| |||||||||||||||| |||||||||| |||||    
T  29942499 ggttaataggtctttaccc-cctgtaatataggtcatttctggttttccccctgtaa 29942444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 278 - 322
Target Start/End: Original strand, 32603511 - 32603554
Alignment:
Q  278 taatataggtcatttccggttttccccttgtaaaaatattttttt 322  Q
    |||||||||||||||||| |||||||| ||| |||||||||||||    
T  32603511 taatataggtcatttccgattttccccctgt-aaaatattttttt 32603554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 131; Significance: 9e-68; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 10 - 240
Target Start/End: Complemental strand, 6763976 - 6763746
Alignment:
Q  10 attattctaactttaaattcaattgtattcagtttggctttaaaagtctcacattcctccggagatatcaagctttcgtaaatggttggacgatcaacat 109  Q
    |||||||||||||| ||||||   |||||  |||| |||  ||||||||  ||||||||||||||||||| |||||||||||  || ||||||||| | |    
T  6763976 attattctaactttgaattcaggagtattgcgtttagctacaaaagtcttccattcctccggagatatcaggctttcgtaaagtgtgggacgatcatctt 6763877  T
Q  110 ctataaaattttcatcaacatctctaagatacttcgttgttaaataagatcgaaaacatctatataattttccagcaagttgaagtacatatttcttccg 209  Q
    ||||||||||| ||||| ||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  6763876 ctataaaatttccatcatcatctttaagatactttgttgttaaataagatcgaaaacatctatgtaattttccagctagttgaagtacatatttcttccg 6763777  T
Q  210 tgattcatcttcattaaggaaataactctac 240  Q
    |||||||||  ||||||||||||||||||||    
T  6763776 tgattcatcaacattaaggaaataactctac 6763746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 254 - 332
Target Start/End: Complemental strand, 25277762 - 25277684
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttcc-ccttgtaaaaatatttttttgatttacccc 332  Q
    |||||||| |||||||| | ||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  25277762 ggttaataggtctttaccc-cctgtaatataggtcatttccggttttccaccttgtaaaattatttttttgatttacccc 25277684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 254 - 332
Target Start/End: Original strand, 3912257 - 3912335
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttccccttgtaaaaatatttttttgatttacccc 332  Q
    |||||| | |||||||| | ||| ||||||||||||||||||||||||||| |||||||   |||||||||||||||||    
T  3912257 ggttaacaggtctttacccccctgtaatataggtcatttccggttttccccctgtaaaatattttttttgatttacccc 3912335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 254 - 332
Target Start/End: Complemental strand, 3912536 - 3912460
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttccccttgtaaaaatatttttttgatttacccc 332  Q
    |||||||| |||||||| | ||| ||||||||||||||| ||||||||||| ||| |||||||||||||||||||||||    
T  3912536 ggttaataagtctttaccc-cctgtaatataggtcattttcggttttccccctgt-aaaatatttttttgatttacccc 3912460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 254 - 333
Target Start/End: Complemental strand, 960553 - 960475
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttccccttgtaaaaatatttttttgatttacccct 333  Q
    |||||||| |||||||| | ||| ||||||||||||||||||||||||| | ||||||| | || |||||||||||||||    
T  960553 ggttaataggtctttaccc-cctgtaatataggtcatttccggttttcctcctgtaaaatttttattttgatttacccct 960475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 254 - 332
Target Start/End: Original strand, 25277473 - 25277552
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttcc-ggttttccccttgtaaaaatatttttttgatttacccc 332  Q
    |||||||| |||||||| | ||| ||||||| ||||||||| ||||| |||| ||||||| |||||||||||||||||||    
T  25277473 ggttaataggtctttacccccctgtaatatatgtcatttccgggtttcccccctgtaaaattatttttttgatttacccc 25277552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 278 - 332
Target Start/End: Complemental strand, 41565541 - 41565486
Alignment:
Q  278 taatataggtcatttccggttttcc-ccttgtaaaaatatttttttgatttacccc 332  Q
    ||||||||||||||||||||||||| || ||||||| |||||||||||||||||||    
T  41565541 taatataggtcatttccggttttccaccctgtaaaattatttttttgatttacccc 41565486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 254 - 379
Target Start/End: Original strand, 10710509 - 10710637
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttccc-cttgtaaaaatatttttttgatttacc-cctgcaannnnnnnnngtttt 351  Q
    |||||||| |||||||| |  || ||||||||||| ||| |||||||||| | ||||||| ||||||||||||||||| |||| ||         |||||    
T  10710509 ggttaataggtctttacccctctgtaatataggtccttttcggttttcccacctgtaaaattatttttttgatttacctcctggaatttttttttgtttt 10710608  T
Q  352 gattta-cccctaataggccaaacaaaaa 379  Q
    |||||| ||||||||||||||||||||||    
T  10710609 gatttaccccctaataggccaaacaaaaa 10710637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 254 - 333
Target Start/End: Original strand, 29309566 - 29309645
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggtttt-ccccttgtaaaaatatttttttgatttacccct 333  Q
    |||||||| |||||||| | ||| ||||||||||||||||||||||| |||| |||||||   ||||||||||||||||||    
T  29309566 ggttaataggtctttaccc-cctgtaatataggtcatttccggttttcccccctgtaaaatattttttttgatttacccct 29309645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 254 - 333
Target Start/End: Original strand, 16093609 - 16093687
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttccccttgtaaaaatatttttttgatttacccct 333  Q
    |||||||| |||||||||| | | |||||||||||||||   ||||||||| ||||||| ||||||||||||||| ||||    
T  16093609 ggttaataggtctttacacccttgtaatataggtcattttttgttttcccc-tgtaaaattatttttttgatttaaccct 16093687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 332
Target Start/End: Original strand, 24970964 - 24971042
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttccccttgtaaaaatatttttttgatttacccc 332  Q
    |||||||| |||||||| | ||| ||||||| |||||||||||||||| || |||||||   ||||||| |||||||||    
T  24970964 ggttaataggtctttacccccctgtaatataagtcatttccggttttctccctgtaaaatatttttttttatttacccc 24971042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 312
Target Start/End: Original strand, 27543412 - 27543470
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttccccttgtaaaa 312  Q
    |||||||| |||||||| | ||| ||||||||||||||| ||||||||||| |||||||    
T  27543412 ggttaataggtctttacccccctgtaatataggtcattttcggttttccccctgtaaaa 27543470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 347 - 379
Target Start/End: Complemental strand, 12330528 - 12330496
Alignment:
Q  347 gttttgatttacccctaataggccaaacaaaaa 379  Q
    |||||||||||||||||||||||||||||||||    
T  12330528 gttttgatttacccctaataggccaaacaaaaa 12330496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 333
Target Start/End: Complemental strand, 14329656 - 14329577
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttcc-ccttgtaaaaatatttttttgatttacccct 333  Q
    |||||||| |||||||| | ||| ||||||||||||||| ||||||||| || ||||||||| || |||||||||| ||||    
T  14329656 ggttaataggtctttaccc-cctgtaatataggtcattttcggttttcctccctgtaaaaattttattttgatttaaccct 14329577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 326
Target Start/End: Complemental strand, 24971234 - 24971162
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttccccttgtaaaaatatttttttgatt 326  Q
    |||||||| |||||||| | ||| |||||||| |||||||||||||| ||| |||||||   |||||||||||    
T  24971234 ggttaataggtctttacccccctgtaatatagatcatttccggtttttcccctgtaaaatattttttttgatt 24971162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 347 - 379
Target Start/End: Complemental strand, 26447545 - 26447513
Alignment:
Q  347 gttttgatttacccctaataggccaaacaaaaa 379  Q
    |||||||||||||||||||||||||||||||||    
T  26447545 gttttgatttacccctaataggccaaacaaaaa 26447513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 332
Target Start/End: Original strand, 41565271 - 41565350
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccg-gttttccccttgtaaaaatatttttttgatttacccc 332  Q
    |||||||| |||||||| | ||| ||||||| ||||||| || |||| |||| ||||||| ||||||||||| |||||||    
T  41565271 ggttaataggtctttacccccctgtaatatatgtcattttcgagtttgccccctgtaaaattatttttttgaattacccc 41565350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 327
Target Start/End: Original strand, 10761449 - 10761499
Alignment:
Q  278 taatataggtcatttccggttttccccttgtaaaa-atatttttttgattt 327  Q
    ||||||||||||||| ||||||| ||||||||||| ||||||||| |||||    
T  10761449 taatataggtcattttcggttttacccttgtaaaatatattttttggattt 10761499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 332
Target Start/End: Original strand, 11105795 - 11105849
Alignment:
Q  278 taatataggtcatttccggttttccccttgtaaaaatatttttttgatttacccc 332  Q
    |||||||||||||||  |||||||||| |||||||   |||||||||||||||||    
T  11105795 taatataggtcatttttggttttccccctgtaaaatattttttttgatttacccc 11105849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 332
Target Start/End: Original strand, 21692423 - 21692477
Alignment:
Q  278 taatataggtcatttccggttttccccttgtaaaaatatttttttgatttacccc 332  Q
    |||||||||||||||  |||||||||| |||||||   |||||||||||||||||    
T  21692423 taatataggtcatttttggttttccccctgtaaaatattttttttgatttacccc 21692477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 333
Target Start/End: Original strand, 23428760 - 23428817
Alignment:
Q  278 taatataggtcatttccggttttccccttgtaaa--aatatttttttgatttacccct 333  Q
    ||||||||||||||| ||||||||||| ||||||  | | ||||||||||||||||||    
T  23428760 taatataggtcatttgcggttttccccctgtaaaatattttttttttgatttacccct 23428817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 332
Target Start/End: Original strand, 27987298 - 27987375
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttccccttgtaaaaatatttttttgatttacccc 332  Q
    |||||||| |||||||| | ||| ||||||||||||||| ||||||||||| ||||||  | || |||||||| |||||    
T  27987298 ggttaataggtctttaccc-cctataatataggtcattttcggttttccccctgtaaattttttattttgattcacccc 27987375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 332
Target Start/End: Original strand, 28044600 - 28044677
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttccccttgtaaaaatatttttttgatttacccc 332  Q
    |||||||| |||||||| | ||| ||||||||||||||| ||||||||||| ||||||  | || |||||||| |||||    
T  28044600 ggttaataggtctttaccc-cctataatataggtcattttcggttttccccctgtaaattttttattttgattcacccc 28044677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Original strand, 4482069 - 4482102
Alignment:
Q  278 taatataggtcatttccggttttccccttgtaaa 311  Q
    ||||||| ||||||||||||||||||||||||||    
T  4482069 taatatatgtcatttccggttttccccttgtaaa 4482102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 332
Target Start/End: Complemental strand, 13759554 - 13759501
Alignment:
Q  279 aatataggtcatttccggttttccccttgtaaaaatatttttttgatttacccc 332  Q
    ||||||||||||||  |||||||||| |||||||   |||||||||||||||||    
T  13759554 aatataggtcatttttggttttccccctgtaaaatattttttttgatttacccc 13759501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 332
Target Start/End: Complemental strand, 18367306 - 18367238
Alignment:
Q  265 ctttacacacctctaatataggtcatttccggttttc-cccttgtaaaaatatttttt-tgatttacccc 332  Q
    |||||| | ||| |||||||||||||||||||||||| ||| ||| |||||||||||| |||||||||||    
T  18367306 ctttacccccctgtaatataggtcatttccggttttctcccctgt-aaaatattttttctgatttacccc 18367238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 332
Target Start/End: Complemental strand, 29309807 - 29309751
Alignment:
Q  278 taatataggtcatttccggtttt--ccccttgtaaaaatatttttttgatttacccc 332  Q
    |||||||||||||||||||||||  |||| |||||||   |||||||||||||||||    
T  29309807 taatataggtcatttccggttttccccccctgtaaaatattttttttgatttacccc 29309751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 254 - 332
Target Start/End: Original strand, 9513829 - 9513908
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttccccttgtaaaa-atattt-ttttgatttacccc 332  Q
    |||||||| |||||||| | ||| ||||||||||||||||||||| ||||| | ||||| || ||| ||||||||||||||    
T  9513829 ggttaatatgtctttaccc-cctgtaatataggtcatttccggttgtccccctataaaatatttttattttgatttacccc 9513908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 278 - 322
Target Start/End: Complemental strand, 30222120 - 30222077
Alignment:
Q  278 taatataggtcatttccggttttccccttgtaaaaatattttttt 322  Q
    ||||||||||||||| ||||||||||| ||| |||||||||||||    
T  30222120 taatataggtcattttcggttttccccctgt-aaaatattttttt 30222077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 347 - 379
Target Start/End: Complemental strand, 34985313 - 34985281
Alignment:
Q  347 gttttgatttacccctaataggccaaacaaaaa 379  Q
    ||||||||| |||||||||||||||||||||||    
T  34985313 gttttgattcacccctaataggccaaacaaaaa 34985281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 253 - 332
Target Start/End: Original strand, 38500283 - 38500363
Alignment:
Q  253 tggttaatacgtctttacacacctctaatataggtcatttccggttttcc-ccttgtaaaaatatttttttgatttacccc 332  Q
    ||||||||| |||||||| | |||  |||||||||||||| |||| |||| || |||||||   |||||||||||||||||    
T  38500283 tggttaataggtctttacccccctgcaatataggtcattttcggtcttcctccctgtaaaatattttttttgatttacccc 38500363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 347 - 379
Target Start/End: Complemental strand, 40770719 - 40770687
Alignment:
Q  347 gttttgatttacccctaataggccaaacaaaaa 379  Q
    |||||||||||||||| ||||||||||||||||    
T  40770719 gttttgatttacccctgataggccaaacaaaaa 40770687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 8e-22; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 254 - 379
Target Start/End: Original strand, 7118088 - 7118216
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggtttt-ccccttgtaaaaatatttttttgattta-cccctgcaannnnnnnnngtttt 351  Q
    |||||||| |||||||||| ||| ||||||||||||||||||||||| |||| ||||||| ||||||||||||||| |||||| ||         |||||    
T  7118088 ggttaataggtctttacacccctgtaatataggtcatttccggttttcccccctgtaaaattatttttttgatttaccccctgtaatttttttttgtttt 7118187  T
Q  352 gattta-cccctaataggccaaacaaaaa 379  Q
    |||||| ||||||||||||||||||||||    
T  7118188 gatttaccccctaataggccaaacaaaaa 7118216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 254 - 332
Target Start/End: Original strand, 49880504 - 49880582
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttccccttgtaaaaatatttttttgatttacccc 332  Q
    |||||||| |||||||  | ||| |||||||||||||||||||||| |||||||||||| |||||||||||| ||||||    
T  49880504 ggttaataggtctttatccccctataatataggtcatttccggtttcccccttgtaaaattatttttttgatctacccc 49880582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 254 - 332
Target Start/End: Complemental strand, 8355623 - 8355545
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttccccttgtaaaaatatttttttgatttacccc 332  Q
    |||||||| |||||||| | ||| |||||||||||||||| |||||||||| |||||||   |||||||||||||||||    
T  8355623 ggttaataggtctttacccccctgtaatataggtcatttctggttttccccctgtaaaatattttttttgatttacccc 8355545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 254 - 332
Target Start/End: Original strand, 20956944 - 20957022
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttccccttgtaaaaatatttttttgatttacccc 332  Q
    |||||||| |||||||||| ||| ||||||| |||||||  | |||||||| ||||||| |||||||||||||||||||    
T  20956944 ggttaataggtctttacacccctgtaatatatgtcatttttgattttccccctgtaaaattatttttttgatttacccc 20957022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 254 - 332
Target Start/End: Complemental strand, 49880793 - 49880715
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttcccct-tgtaaaaatatttttttgatttacccc 332  Q
    |||||||| |||||||| | ||| |||||||||||||||||||||| ||||  ||||||| |||||||||||||||||||    
T  49880793 ggttaataggtctttaccc-cctgtaatataggtcatttccggtttccccccctgtaaaattatttttttgatttacccc 49880715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 331
Target Start/End: Original strand, 30586163 - 30586241
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttc-cccttgtaaaaatatttttttgatttaccc 331  Q
    |||||||| |||||||| | ||| |||||||||||||||||||||||| ||| ||||||||| || |||||||| ||||    
T  30586163 ggttaataggtctttacccccctgtaatataggtcatttccggttttcacccctgtaaaaattttattttgattcaccc 30586241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 254 - 326
Target Start/End: Original strand, 27760290 - 27760361
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttccccttgtaaaaatatttttttgatt 326  Q
    |||||||| |||||||| | ||| |||||||||||||||| |||||||||||||||||| | || ||||||||    
T  27760290 ggttaataagtctttaccc-cctgtaatataggtcatttctggttttccccttgtaaaatttttattttgatt 27760361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 278 - 332
Target Start/End: Complemental strand, 7118350 - 7118298
Alignment:
Q  278 taatataggtcatttccggttttccccttgtaaaaatatttttttgatttacccc 332  Q
    ||||||||||||||| ||||||||||  ||||||| |||||||||||||||||||    
T  7118350 taatataggtcattttcggttttccc--tgtaaaattatttttttgatttacccc 7118298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 253 - 331
Target Start/End: Original strand, 29313788 - 29313866
Alignment:
Q  253 tggttaatacgtctttacacacctctaatataggtcatttccggttttc-cccttgtaaaaatatttttttgatttaccc 331  Q
    ||||||||| |||||||| | ||| ||||||||||||||| |||||||| ||| ||||||||| || |||||||||||||    
T  29313788 tggttaataggtctttac-ctcctgtaatataggtcattttcggttttctcccctgtaaaaattttattttgatttaccc 29313866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 332
Target Start/End: Complemental strand, 3548412 - 3548334
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttccccttgtaaaaatatttttttgatttacccc 332  Q
    |||||||| |||||||| |  || |||||||||| |||| ||||||||||| ||||||||| || |||||||| |||||    
T  3548412 ggttaataggtctttacccctctgtaatataggttattttcggttttccccctgtaaaaattttattttgattcacccc 3548334  T

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Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 332
Target Start/End: Original strand, 9322120 - 9322197
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttccccttgtaaaaatatttttttgatttacccc 332  Q
    |||||||| |||||||| | ||| ||||||| |||||||| || ||||||| ||||| | |||||||||||||||||||    
T  9322120 ggttaataggtctttactc-cctgtaatatatgtcatttctgggtttccccctgtaacattatttttttgatttacccc 9322197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 332
Target Start/End: Complemental strand, 49873005 - 49872928
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttccccttgtaaaaatatttttttgatttacccc 332  Q
    |||||||| |||||||| | ||| ||||||||||||||||||||||||||| ||||||  | || |||||||| |||||    
T  49873005 ggttaataggtctttaccc-cctgtaatataggtcatttccggttttccccctgtaaagtttttattttgattcacccc 49872928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 278 - 323
Target Start/End: Original strand, 14004256 - 14004300
Alignment:
Q  278 taatataggtcatttccggttttccccttgtaaaaatatttttttg 323  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||    
T  14004256 taatatatgtcatttccggttttccccttgt-aaaatatttttttg 14004300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 330
Target Start/End: Original strand, 6510216 - 6510290
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttccccttgtaaaaatatttttttgatttacc 330  Q
    |||||||| |||||||| | ||| |||||||||||||||||| |||||||| |||||||   |||||||||||||||    
T  6510216 ggttaataggtctttaccc-cctgtaatataggtcatttccgattttcccc-tgtaaaatattttttttgatttacc 6510290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 347 - 379
Target Start/End: Original strand, 25109926 - 25109958
Alignment:
Q  347 gttttgatttacccctaataggccaaacaaaaa 379  Q
    |||||||||||||||||||||||||||||||||    
T  25109926 gttttgatttacccctaataggccaaacaaaaa 25109958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 332
Target Start/End: Original strand, 51252050 - 51252127
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttcccct-tgtaaaaatatttttttgatttacccc 332  Q
    |||||||| |||||||| | ||| |||||||||| ||||| ||||||||||| ||| ||||||||||||| |||||||||    
T  51252050 ggttaataggtctttactc-cctgtaatataggttatttctggttttcccctctgt-aaaatattttttttatttacccc 51252127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 332
Target Start/End: Complemental strand, 51252341 - 51252262
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggtttt-ccccttgtaaaaatatttttttgatttacccc 332  Q
    |||||||| |||||||  | ||| |||||||||||||||| |||||| |||| |||||||   |||||||||||||||||    
T  51252341 ggttaataggtctttatccccctgtaatataggtcatttctggttttcccccctgtaaaatattttttttgatttacccc 51252262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 5205117 - 5205167
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttcccc 304  Q
    |||||||| || ||||| | ||| |||||||||||||||||||||||||||    
T  5205117 ggttaataggtttttacccccctgtaatataggtcatttccggttttcccc 5205167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 5205411 - 5205361
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttcccc 304  Q
    |||||||| || ||||| | ||| |||||||||||||||||||||||||||    
T  5205411 ggttaataggtttttacccccctgtaatataggtcatttccggttttcccc 5205361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 332
Target Start/End: Original strand, 23388747 - 23388801
Alignment:
Q  278 taatataggtcatttccggttttccccttgtaaaaatatttttttgatttacccc 332  Q
    |||||||||||||||   |||||||||||||||||   |||||||||||||||||    
T  23388747 taatataggtcattttttgttttccccttgtaaaatattttttttgatttacccc 23388801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 323
Target Start/End: Complemental strand, 23626270 - 23626225
Alignment:
Q  278 taatataggtcatttccggtttt-ccccttgtaaaaatatttttttg 323  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||    
T  23626270 taatataggtcatttccggttttaccccttgtaaaa-tatttttttg 23626225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 331
Target Start/End: Complemental strand, 25110117 - 25110040
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttcc-ccttgtaaaaatatttttttgatttaccc 331  Q
    |||||||| |||||||||| ||| ||||||||||||||| ||||||||| || ||||||| | || |||||||| ||||    
T  25110117 ggttaataggtctttacac-cctgtaatataggtcattttcggttttcctccctgtaaaatttttattttgattcaccc 25110040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 254 - 302
Target Start/End: Original strand, 4699976 - 4700024
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttcc 302  Q
    |||||||| ||||||||   ||| |||||||||||||||||||||||||    
T  4699976 ggttaataggtctttacctccctgtaatataggtcatttccggttttcc 4700024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 347 - 379
Target Start/End: Original strand, 27497888 - 27497920
Alignment:
Q  347 gttttgatttacccctaataggccaaacaaaaa 379  Q
    ||||||||||||||||||||||| |||||||||    
T  27497888 gttttgatttacccctaataggctaaacaaaaa 27497920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 3e-18; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 254 - 332
Target Start/End: Original strand, 21246477 - 21246556
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggtttt-ccccttgtaaaaatatttttttgatttacccc 332  Q
    |||||||| |||||||||| ||| ||||||||||||||| ||||||| |||| ||||||| |||||||||||||||||||    
T  21246477 ggttaataggtctttacacccctgtaatataggtcattttcggttttcccccatgtaaaattatttttttgatttacccc 21246556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 254 - 330
Target Start/End: Complemental strand, 18320752 - 18320676
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttccccttgtaaaaatatttttttgatttacc 330  Q
    |||||||| |||||||| | ||| ||||||||||||||||||||||||||| ||||||| | || ||||||||||||    
T  18320752 ggttaataggtctttacccccctgtaatataggtcatttccggttttccccctgtaaaattcttattttgatttacc 18320676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 254 - 379
Target Start/End: Original strand, 51965373 - 51965499
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttccccttgtaaaaatatttttttgatttacccctgcaannnnnnnnngttttga 353  Q
    |||||||| |||||||| | ||| ||||||||||||||||||||||||||  ||||||| | | |||||||||||||| || ||         |||||||    
T  51965373 ggttaataggtctttactc-cctgtaatataggtcatttccggttttccctctgtaaaattgtatttttgatttacccgtgtaaaatatttttgttttga 51965471  T
Q  354 tttac--ccctaataggccaaacaaaaa 379  Q
    |||||  |||||||||||||||||||||    
T  51965472 tttacctccctaataggccaaacaaaaa 51965499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 254 - 332
Target Start/End: Complemental strand, 5402054 - 5401976
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttccccttgtaaaaatattt-ttttgatttacccc 332  Q
    |||||||| |||||||| | | | ||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||||    
T  5402054 ggttaataggtctttacccccttgtaatataggtcatttccggttttccccctgtaaaa-tatttattttgatttacccc 5401976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 379
Target Start/End: Complemental strand, 21246767 - 21246639
Alignment:
Q  254 ggttaatacgtctttacacacc-tctaatataggtcatttccggttttccccttgtaaaaatatttttttgattta--cccctgcaannnnnnnnngttt 350  Q
    |||||||| |||||||| | || | ||||||| ||||||| ||||| ||||| ||||||| |||||||||||||||  |||||| ||         ||||    
T  21246767 ggttaataggtctttaccccccctgtaatatatgtcattttcggttctccccctgtaaaattatttttttgatttacccccctgtaattcttttttgttt 21246668  T
Q  351 tgatttacccctaataggccaaacaaaaa 379  Q
    ||||||||| |||||||||||||||||||    
T  21246667 tgatttaccactaataggccaaacaaaaa 21246639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 255 - 328
Target Start/End: Original strand, 27579516 - 27579588
Alignment:
Q  255 gttaatacgtctttacacacctctaatataggtcatttccggttttccccttgtaaaaatatttttttgattta 328  Q
    ||||||| |||||||| | ||| |||||||||||||||||||||||| |  ||||||| |||||||||||||||    
T  27579516 gttaataggtctttaccc-cctgtaatataggtcatttccggttttctctctgtaaaattatttttttgattta 27579588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 253 - 332
Target Start/End: Original strand, 13334822 - 13334902
Alignment:
Q  253 tggttaatacgtctttacacacctctaatataggtcatttccggtttt-ccccttgtaaaaatatttttttgatttacccc 332  Q
    ||||||||| |||||||| | ||| |||||||||||||||| |||||| |||| |||||||   |||||||||||||||||    
T  13334822 tggttaataggtctttacccccctgtaatataggtcatttctggttttcccccctgtaaaatattttttttgatttacccc 13334902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 278 - 332
Target Start/End: Complemental strand, 46094273 - 46094218
Alignment:
Q  278 taatataggtcatttccggtttt-ccccttgtaaaaatatttttttgatttacccc 332  Q
    ||||||||||||||||||||||| |||| |||||||  ||||||||||||||||||    
T  46094273 taatataggtcatttccggtttttccccctgtaaaataatttttttgatttacccc 46094218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 332
Target Start/End: Original strand, 21780123 - 21780200
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttccccttgtaaaaatatttttttgatttacccc 332  Q
    |||||||| |||||||| | ||| ||||||||||||||| ||||||||||| ||||||| | || |||||||| |||||    
T  21780123 ggttaataggtctttaccc-cctgtaatataggtcattttcggttttccccctgtaaaatttttattttgattcacccc 21780200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 325
Target Start/End: Original strand, 18454193 - 18454265
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttc-cccttgtaaaaatatttttttgat 325  Q
    |||||||| |||||||| | ||| |||||||||||||||||||||||| ||| ||||||| | || |||||||    
T  18454193 ggttaataggtctttacccccctgtaatataggtcatttccggttttcacccctgtaaaatttttattttgat 18454265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 253 - 332
Target Start/End: Complemental strand, 27579801 - 27579722
Alignment:
Q  253 tggttaatacgtctttacacacctctaatataggtcatttccggttttc-cccttgtaaaaatatttttttgatttacccc 332  Q
    ||||||||| |||||||| | | | |||||||||||||||||||||||| ||| ||||||  | |||||||||||||||||    
T  27579801 tggttaatatgtctttaccctc-tgtaatataggtcatttccggttttctcccctgtaaatttttttttttgatttacccc 27579722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 347 - 379
Target Start/End: Complemental strand, 46119727 - 46119695
Alignment:
Q  347 gttttgatttacccctaataggccaaacaaaaa 379  Q
    |||||||||||||||||||||||||||||||||    
T  46119727 gttttgatttacccctaataggccaaacaaaaa 46119695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 347 - 379
Target Start/End: Complemental strand, 46132861 - 46132829
Alignment:
Q  347 gttttgatttacccctaataggccaaacaaaaa 379  Q
    |||||||||||||||||||||||||||||||||    
T  46132861 gttttgatttacccctaataggccaaacaaaaa 46132829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 278 - 327
Target Start/End: Original strand, 12388109 - 12388160
Alignment:
Q  278 taatataggtcatttccggtttt-ccccttgtaaaa-atatttttttgattt 327  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||| |||||    
T  12388109 taatataggtcatttccggttttaccccttgtaaaatatattttttagattt 12388160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 301
Target Start/End: Complemental strand, 18454486 - 18454439
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttc 301  Q
    |||||||| |||||||| | ||| ||||||||||||||||||||||||    
T  18454486 ggttaataggtctttacccccctgtaatataggtcatttccggttttc 18454439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 332
Target Start/End: Original strand, 20514680 - 20514734
Alignment:
Q  278 taatataggtcatttccggttttccccttgtaaaaatatttttttgatttacccc 332  Q
    |||||||||||||||  |||||||||| |||||||   |||||||||||||||||    
T  20514680 taatataggtcatttttggttttccccctgtaaaatattttttttgatttacccc 20514734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 265 - 322
Target Start/End: Original strand, 49296014 - 49296071
Alignment:
Q  265 ctttacacacctctaatataggtcatttccggttttcccct-tgtaaaaatattttttt 322  Q
    |||||| | ||| |||||||||||||||||||||||||||| ||| |||||||||||||    
T  49296014 ctttactctcctgtaatataggtcatttccggttttcccctctgt-aaaatattttttt 49296071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 332
Target Start/End: Original strand, 51353248 - 51353301
Alignment:
Q  278 taatataggtcatttccggttttccccttgtaaaaatatttttttgatttacccc 332  Q
    ||||||||||||||| ||||||||||| |||||| || ||||||| |||||||||    
T  51353248 taatataggtcattttcggttttccccctgtaaatat-ttttttttatttacccc 51353301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 326
Target Start/End: Original strand, 16493519 - 16493591
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttc-cccttgtaaaaatatttttttgatt 326  Q
    |||||||| |||||||| | ||| |||||||||||||||||||||||| ||| ||||||||  || ||||||||    
T  16493519 ggttaataggtctttac-ctcctgtaatataggtcatttccggttttcacccctgtaaaaaatttattttgatt 16493591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 327
Target Start/End: Complemental strand, 33316758 - 33316710
Alignment:
Q  278 taatataggtcatttccggttttccccttgtaaaaatatttttttgattt 327  Q
    |||||||||||||||||||||| |||| ||| ||||||||||||| ||||    
T  33316758 taatataggtcatttccggtttcccccctgt-aaaatattttttttattt 33316710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 326
Target Start/End: Original strand, 44519458 - 44519530
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccgg-ttttccccttgtaaaaatatttttttgatt 326  Q
    |||||||| |||||||| | ||| ||||| ||||||||||||| |||||||||||||||| | || ||||||||    
T  44519458 ggttaataggtctttac-ctcctgtaatagaggtcatttccggtttttccccttgtaaaatttttattttgatt 44519530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 347 - 379
Target Start/End: Complemental strand, 17800944 - 17800912
Alignment:
Q  347 gttttgatttacccctaataggccaaacaaaaa 379  Q
    |||||||||||||||||||||||| ||||||||    
T  17800944 gttttgatttacccctaataggccgaacaaaaa 17800912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 274 - 310
Target Start/End: Complemental strand, 54130569 - 54130533
Alignment:
Q  274 cctctaatataggtcatttccggttttccccttgtaa 310  Q
    |||||||||||||||||||||| |||||||| |||||    
T  54130569 cctctaatataggtcatttccgattttccccatgtaa 54130533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0769 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0769
Description:

Target: scaffold0769; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 254 - 332
Target Start/End: Original strand, 3915 - 3993
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttccccttgtaaaaatatttttttgatttacccc 332  Q
    |||||||| |||||||| | ||| ||||||||||||||||||||||||||| |||||||   |||||||||||||||||    
T  3915 ggttaataggtctttacccccctgtaatataggtcatttccggttttccccctgtaaaatattttttttgatttacccc 3993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0769; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 254 - 332
Target Start/End: Complemental strand, 4207 - 4129
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggtttt-ccccttgtaaaaatatttttttgatttacccc 332  Q
    |||||||| |||||||| | ||| ||||||||||||||||||||||| |||| |||||||   |||||||||||||||||    
T  4207 ggttaataggtctttaccc-cctgtaatataggtcatttccggttttcccccctgtaaaatattttttttgatttacccc 4129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 10 - 83
Target Start/End: Original strand, 127736 - 127809
Alignment:
Q  10 attattctaactttaaattcaattgtattcagtttggctttaaaagtctcacattcctccggagatatcaagct 83  Q
    |||||||||||||||||||||   |||||| |||| |||||||||||||| ||||||||| |||||||||||||    
T  127736 attattctaactttaaattcaggagtattcggtttagctttaaaagtctcccattcctccagagatatcaagct 127809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 7e-16; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 254 - 332
Target Start/End: Complemental strand, 20041192 - 20041113
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttcc-ccttgtaaaaatatttttttgatttacccc 332  Q
    |||||||| || ||||| | ||| ||||||||||||||||||||||||| || ||||||| |||||||||||||||||||    
T  20041192 ggttaataggtttttacccccctgtaatataggtcatttccggttttccaccctgtaaaattatttttttgatttacccc 20041113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 256 - 332
Target Start/End: Original strand, 39065386 - 39065461
Alignment:
Q  256 ttaatacgtctttacacacctctaatataggtcatttccggttttccccttgtaaaaatatttttttgatttacccc 332  Q
    |||||| |||||||| | ||| ||||||||||||||||||||||| ||| |||||||  ||||||||||||||||||    
T  39065386 ttaataggtctttaccc-cctgtaatataggtcatttccggtttttcccctgtaaaataatttttttgatttacccc 39065461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 253 - 332
Target Start/End: Complemental strand, 13797668 - 13797589
Alignment:
Q  253 tggttaatacgtctttacacacctctaatataggtcatttccggttttc-cccttgtaaaaatatttttttgatttacccc 332  Q
    ||||||||| |||||||| | ||| |||||||||||||||||| ||||| ||| |||||||  ||||||||||||||||||    
T  13797668 tggttaataggtctttaccc-cctgtaatataggtcatttccgattttctcccctgtaaaataatttttttgatttacccc 13797589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 254 - 332
Target Start/End: Original strand, 5766639 - 5766717
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccgg-ttttccccttgtaaaaatatttttttgatttacccc 332  Q
    |||||||| |||||||| | ||| ||||||||||||||||||| |||||||| |||||||  || |||||||||||||||    
T  5766639 ggttaatatgtctttaccc-cctgtaatataggtcatttccggtttttccccctgtaaaataatatttttgatttacccc 5766717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 254 - 332
Target Start/End: Original strand, 20040900 - 20040979
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttcccct-tgtaaaaatatttttttgatttacccc 332  Q
    ||||||||  ||||||| | ||| ||||||| ||||||||||| |||||||  ||||||| |||||||||||||||||||    
T  20040900 ggttaatagatctttacccccctgtaatatatgtcatttccgggtttcccccctgtaaaattatttttttgatttacccc 20040979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 274 - 379
Target Start/End: Original strand, 43251533 - 43251638
Alignment:
Q  274 cctctaatataggtcatttccggttttccccttgtaaaaatatttttttgatttacccctgcaannnnnnnnngttttgatttacccc-taataggccaa 372  Q
    ||||||||||| ||||||| || |||||||| ||||||||| || |||||||| ||||||| ||         ||||||||||||||| |||||||||||    
T  43251533 cctctaatatatgtcattttcgattttcccc-tgtaaaaattttattttgattcacccctgtaaaatatttttgttttgatttaccccttaataggccaa 43251631  T
Q  373 acaaaaa 379  Q
    |||||||    
T  43251632 acaaaaa 43251638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 254 - 379
Target Start/End: Complemental strand, 44414133 - 44414010
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttccccttgtaaaaatatttttttgatttacccctgcaannnnnnnnngttttga 353  Q
    |||||||| |||||||| |  || |||||||||||||||  |||||| || |||||||| | || |||||||| ||||||  ||         |||||||    
T  44414133 ggttaataggtctttaccc--ctgtaatataggtcatttatggtttttcctttgtaaaatttttattttgattcacccctctaaaatatttttgttttga 44414036  T
Q  354 tttacccctaataggccaaacaaaaa 379  Q
    ||||||||||||||||||||||||||    
T  44414035 tttacccctaataggccaaacaaaaa 44414010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 278 - 332
Target Start/End: Complemental strand, 35264512 - 35264458
Alignment:
Q  278 taatataggtcatttccggttttccccttgtaaaaatatttttttgatttacccc 332  Q
    |||||||||||||||||||||||||||  ||||||   |||||||||||||||||    
T  35264512 taatataggtcatttccggttttcccccagtaaaatattttttttgatttacccc 35264458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 332
Target Start/End: Original strand, 38192963 - 38193040
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttccccttgtaaaaatatttttttgatttacccc 332  Q
    |||||||| |||||||| | ||| |||||||||||||||||| ||||| || ||| ||||| || ||||||||||||||    
T  38192963 ggttaataggtctttacccccctgtaatataggtcatttccgattttctccctgt-aaaattttattttgatttacccc 38193040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 254 - 331
Target Start/End: Original strand, 23784585 - 23784661
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttccccttgtaaaaatatttttttgatttaccc 331  Q
    |||||||| |||||||| | ||| |||||||||||||| | |||||||||| ||||||||| || |||||||| ||||    
T  23784585 ggttaataggtctttaccc-cctgtaatataggtcattactggttttccccctgtaaaaattttattttgattcaccc 23784661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 331
Target Start/End: Original strand, 16902107 - 16902182
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttcc-ccttgtaaaaatatttttttgatttaccc 331  Q
    |||||||| ||||||||   ||||||||||||||||||||||||||||| || ||||||| | |  |||||||||||||    
T  16902107 ggttaataggtctttac---cctctaatataggtcatttccggttttcctccctgtaaaattttgattttgatttaccc 16902182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 326
Target Start/End: Original strand, 23371450 - 23371521
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttccccttgtaaaaatatttttttgatt 326  Q
    |||||||| |||||||| | ||| |||||||||||||||  |||||||||| ||||||||| || ||||||||    
T  23371450 ggttaataggtctttaccc-cctgtaatataggtcatttatggttttccccctgtaaaaattttattttgatt 23371521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 347 - 379
Target Start/End: Original strand, 34857677 - 34857709
Alignment:
Q  347 gttttgatttacccctaataggccaaacaaaaa 379  Q
    |||||||||||||||||||||||||||||||||    
T  34857677 gttttgatttacccctaataggccaaacaaaaa 34857709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 334
Target Start/End: Complemental strand, 39580222 - 39580143
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttccccttgtaaaaatatttttttgatttacccctg 334  Q
    |||||||| |||||||| | ||| ||||||||||||||||||||||||| | ||||||  | || |||||||| |||||||    
T  39580222 ggttaataggtctttaccc-cctgtaatataggtcatttccggttttcctcctgtaaattttttattttgattcacccctg 39580143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 332
Target Start/End: Original strand, 13279185 - 13279263
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttccc-cttgtaaaaatatttttttgatttacccc 332  Q
    ||||||||||||||||| | | | |||||||||||||||| ||||||||| ||||||||| | || |||||||| |||||    
T  13279185 ggttaatacgtctttaccc-cttataatataggtcatttctggttttccctcttgtaaaatttttattttgattcacccc 13279263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 332
Target Start/End: Original strand, 24374279 - 24374346
Alignment:
Q  265 ctttacacacctctaatataggtcatttccggttttccccttgtaaaaatatttttttgatttacccc 332  Q
    |||||| | ||| |||||||||||||||  |||||||||| |||||||   |||||||||||||||||    
T  24374279 ctttacccccctgtaatataggtcattttgggttttccccctgtaaaatattttttttgatttacccc 24374346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 379
Target Start/End: Original strand, 24845639 - 24845766
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttccccttgta--aaaata-tttttttgattta-cccctgcaannnnnnnnngtt 349  Q
    |||||||| |||||||| | ||| ||||||||||||||| ||||||||||| ||||  |||||| ||||||||||||| |||||| ||         |||    
T  24845639 ggttaataggtctttac-ctcctgtaatataggtcattttcggttttcccc-tgtagtaaaatattttttttgatttaccccctgtaatttttttttgtt 24845736  T
Q  350 ttgatttacccctaataggccaaacaaaaa 379  Q
    ||||||| ||||||||||| ||||||||||    
T  24845737 ttgatttccccctaataggtcaaacaaaaa 24845766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 379
Target Start/End: Original strand, 29141050 - 29141081
Alignment:
Q  348 ttttgatttacccctaataggccaaacaaaaa 379  Q
    ||||||||||||||||||||||||||||||||    
T  29141050 ttttgatttacccctaataggccaaacaaaaa 29141081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 312
Target Start/End: Original strand, 2240873 - 2240907
Alignment:
Q  278 taatataggtcatttccggttttccccttgtaaaa 312  Q
    ||||||||||||||||||||||||||| |||||||    
T  2240873 taatataggtcatttccggttttccccctgtaaaa 2240907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 13797417 - 13797467
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttcccc 304  Q
    |||||||| |||||||| | ||| ||||||| |||||||||||||||||||    
T  13797417 ggttaataggtctttacccccctgtaatataagtcatttccggttttcccc 13797467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 275 - 313
Target Start/End: Complemental strand, 34010819 - 34010781
Alignment:
Q  275 ctctaatataggtcatttccggttttccccttgtaaaaa 313  Q
    ||||||||||| |||||||||||||||||| ||||||||    
T  34010819 ctctaatatagatcatttccggttttccccctgtaaaaa 34010781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 334
Target Start/End: Complemental strand, 31534192 - 31534136
Alignment:
Q  278 taatataggtcatttccggtttt-ccccttgtaaaaatatttttttgatttacccctg 334  Q
    ||||||| ||||||||||| ||| |||||||||||| ||||||||| |||||||||||    
T  31534192 taatataagtcatttccggatttaccccttgtaaaa-tattttttttatttacccctg 31534136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 278 - 322
Target Start/End: Complemental strand, 2301173 - 2301130
Alignment:
Q  278 taatataggtcatttccggttttccccttgtaaaaatattttttt 322  Q
    |||| |||||||||||||||||||||| ||| |||||||||||||    
T  2301173 taatgtaggtcatttccggttttccccctgt-aaaatattttttt 2301130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 278 - 332
Target Start/End: Original strand, 15037281 - 15037337
Alignment:
Q  278 taatataggtcatttccggttttccccttgtaaaa-atattt-ttttgatttacccc 332  Q
    |||||| |||||||||||||||||||| ||||||| || ||| ||||||||||||||    
T  15037281 taatattggtcatttccggttttccccctgtaaaatatttttgttttgatttacccc 15037337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 347 - 379
Target Start/End: Original strand, 24362258 - 24362290
Alignment:
Q  347 gttttgatttacccctaataggccaaacaaaaa 379  Q
    ||||||||||||||||||||| |||||||||||    
T  24362258 gttttgatttacccctaatagaccaaacaaaaa 24362290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 278 - 333
Target Start/End: Original strand, 29141008 - 29141064
Alignment:
Q  278 taatataggtcatttccggttttcccc-ttgtaaaaatatttttttgatttacccct 333  Q
    |||||||||||||||||| ||||||||  |||||||   ||||||||||||||||||    
T  29141008 taatataggtcatttccgattttccccgctgtaaaatattttttttgatttacccct 29141064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 278 - 322
Target Start/End: Complemental strand, 30335415 - 30335371
Alignment:
Q  278 taatataggtcatttccggttttccccttgtaaaaatattttttt 322  Q
    |||||||||||||||  |||||||||| ||||||||| |||||||    
T  30335415 taatataggtcatttttggttttccccctgtaaaaattttttttt 30335371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 278 - 322
Target Start/End: Complemental strand, 32946603 - 32946560
Alignment:
Q  278 taatataggtcatttccggttttccccttgtaaaaatattttttt 322  Q
    ||||||||||||||||||||||||||| | | |||||||||||||    
T  32946603 taatataggtcatttccggttttccccctat-aaaatattttttt 32946560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 254 - 330
Target Start/End: Complemental strand, 48104784 - 48104709
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttccccttgtaaaaatatttttttgatttacc 330  Q
    |||||||| |||||||| | ||| ||||||||||||||| ||||||||||  ||||||| | || |||| |||||||    
T  48104784 ggttaataggtctttac-ctcctgtaatataggtcattttcggttttccctctgtaaaatttttatttttatttacc 48104709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 7e-16; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 278 - 332
Target Start/End: Original strand, 23889701 - 23889756
Alignment:
Q  278 taatataggtcatttccggttttccccttgtaaaa-atatttttttgatttacccc 332  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  23889701 taatataggtcatttccggttttccccctgtaaaatatatttttttgatttacccc 23889756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 254 - 330
Target Start/End: Complemental strand, 18458858 - 18458784
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttccccttgtaaaaatatttttttgatttacc 330  Q
    |||||||| |||||||| | ||| ||||||||||||||||||||||||| | ||| |||||||||||||||||||||    
T  18458858 ggttaataggtctttaccc-cctgtaatataggtcatttccggttttcctcctgt-aaaatatttttttgatttacc 18458784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 254 - 333
Target Start/End: Original strand, 28797160 - 28797240
Alignment:
Q  254 ggttaatacgtctttacacac-ctctaatataggtcatttccggttttccccttgtaaaaatatttttttgatttacccct 333  Q
    |||||||| |||||||| | | || |||||||||||||||||||||||| || ||||||| ||||||||| ||||||||||    
T  28797160 ggttaataggtctttaccccctctgtaatataggtcatttccggttttctccctgtaaaattattttttttatttacccct 28797240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 332
Target Start/End: Original strand, 27794359 - 27794436
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttccccttgtaaaaatatttttttgatttacccc 332  Q
    |||||||| |||||||| | ||| ||||||||||||||||||| ||||||| ||||||||| || |||||||| |||||    
T  27794359 ggttaataggtctttacccccctataatataggtcatttccgg-tttccccctgtaaaaattttattttgattcacccc 27794436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 158 - 211
Target Start/End: Original strand, 9953535 - 9953588
Alignment:
Q  158 atcgaaaacatctatataattttccagcaagttgaagtacatatttcttccgtg 211  Q
    ||||||||||||||| ||||||| || ||||||||||||||| |||||||||||    
T  9953535 atcgaaaacatctatgtaatttttcaacaagttgaagtacatgtttcttccgtg 9953588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 254 - 329
Target Start/End: Original strand, 2472391 - 2472466
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttc-cccttgtaaaaatatttttttgatttac 329  Q
    |||||||| ||||||| || ||| |||||||||||||||| ||||||| || |||||||| ||||||||||||||||    
T  2472391 ggttaataggtcttta-acccctgtaatataggtcatttctggttttcacctttgtaaaattatttttttgatttac 2472466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 254 - 332
Target Start/End: Complemental strand, 10028033 - 10027954
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttcccct-tgtaaaa-atatttttttgatttacccc 332  Q
    |||||||| |||||||| | ||| |||||||||||||||| ||||||||||| ||||||| || |||||||||||||||||    
T  10028033 ggttaataggtctttaccc-cctgtaatataggtcatttctggttttcccctctgtaaaatatttttttttgatttacccc 10027954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 278 - 330
Target Start/End: Complemental strand, 42736854 - 42736802
Alignment:
Q  278 taatataggtcatttccggttttccccttgtaaaaatatttttttgatttacc 330  Q
    ||||||||||||||||||||||||||| ||||||| | || ||||||||||||    
T  42736854 taatataggtcatttccggttttccccctgtaaaattcttattttgatttacc 42736802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 320
Target Start/End: Original strand, 24987609 - 24987674
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttccccttgtaaaaatattttt 320  Q
    |||||||| |||||||| | ||| ||||||||||||||||||||||| ||| ||||||||| |||||    
T  24987609 ggttaataggtctttaccc-cctgtaatataggtcatttccggtttttcccctgtaaaaattttttt 24987674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 253 - 334
Target Start/End: Complemental strand, 2472641 - 2472561
Alignment:
Q  253 tggttaatacgtctttacacacctctaatataggtcatttccggttttccccttgtaaaaatatttttttgatttacccctg 334  Q
    ||||||||| |||||||| | ||| |||||||||| |||| || |||||||| |  |||| |||||||||||||||||||||    
T  2472641 tggttaataggtctttaccc-cctgtaatataggttattttcgattttcccccttgaaaattatttttttgatttacccctg 2472561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 254 - 311
Target Start/End: Complemental strand, 8620249 - 8620192
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttccccttgtaaa 311  Q
    ||||||||  ||||||| | ||| ||||||||||||||||||||||||||| ||||||    
T  8620249 ggttaatagatctttacccccctgtaatataggtcatttccggttttccccctgtaaa 8620192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 278 - 322
Target Start/End: Original strand, 22387169 - 22387212
Alignment:
Q  278 taatataggtcatttccggttttccccttgtaaaaatattttttt 322  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||    
T  22387169 taatataggtcattttcggttttccccttgt-aaaatattttttt 22387212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 333
Target Start/End: Complemental strand, 30659464 - 30659385
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttccc-cttgtaaaaatatttttttgatttacccct 333  Q
    |||||||| |||||||| | ||| ||||||| |||||||| || |||||| | ||||||| ||||||||||||||||||||    
T  30659464 ggttaataggtctttaccc-cctgtaatatatgtcatttctgggtttccctcctgtaaaattatttttttgatttacccct 30659385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 332
Target Start/End: Complemental strand, 22604718 - 22604640
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccgg-ttttccccttgtaaaaatatttttttgatttacccc 332  Q
    |||||||| ||||||| || ||| ||||||||||||||||||| |||| ||| |||||||   |||||||||||||||||    
T  22604718 ggttaataggtcttta-acccctgtaatataggtcatttccggttttttcccctgtaaaatattttttttgatttacccc 22604640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 332
Target Start/End: Complemental strand, 35034328 - 35034274
Alignment:
Q  278 taatataggtcatttccggttttccccttgtaaaaatatttttttgatttacccc 332  Q
    |||||||||||||||||||||||| || || |||||| || ||||||||| ||||    
T  35034328 taatataggtcatttccggttttctccctgaaaaaattttattttgatttgcccc 35034274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 331
Target Start/End: Complemental strand, 15790529 - 15790452
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttccccttgtaaaaatatttttttgatttaccc 331  Q
    |||||||| ||||| || | ||| |||||||||||||||| ||||||| || ||||||| | || |||||||| ||||    
T  15790529 ggttaataggtcttgacccccctgtaatataggtcatttctggttttcaccctgtaaaatttttattttgattcaccc 15790452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 333
Target Start/End: Complemental strand, 30659597 - 30659519
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttccc-cttgtaaaaatatttttttgatttacccct 333  Q
    |||||||| |||||||| |  || ||||||| ||||||||||| |||| | | ||||||| ||||||||||||||||||||    
T  30659597 ggttaataggtctttaccc--ctgtaatatatgtcatttccgggtttctctcatgtaaaattatttttttgatttacccct 30659519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 254 - 333
Target Start/End: Original strand, 7112495 - 7112574
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggtttt-ccccttgtaaaaatatttttttgatttacccct 333  Q
    |||||||| |||||||| | ||| ||||||| ||||||| ||||||| |||| ||||||| | || |||||||||||||||    
T  7112495 ggttaataggtctttaccc-cctgtaatatatgtcattttcggtttttccccctgtaaaatttttattttgatttacccct 7112574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 278 - 322
Target Start/End: Complemental strand, 21771073 - 21771030
Alignment:
Q  278 taatataggtcatttccggttttccccttgtaaaaatattttttt 322  Q
    |||||||||||||||||||||| |||| ||| |||||||||||||    
T  21771073 taatataggtcatttccggtttcccccctgt-aaaatattttttt 21771030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 347 - 379
Target Start/End: Original strand, 25235865 - 25235897
Alignment:
Q  347 gttttgatttacccctaataggccaaacaaaaa 379  Q
    |||||||||||||||||||| ||||||||||||    
T  25235865 gttttgatttacccctaataagccaaacaaaaa 25235897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 254 - 326
Target Start/End: Complemental strand, 28411204 - 28411132
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttccccttgtaaaaatatttttttgatt 326  Q
    |||||| | |||||||| | ||| |||||||||||||||| |||||| ||| ||||||| | || ||||||||    
T  28411204 ggttaagaggtctttacccccctttaatataggtcatttctggtttttcccctgtaaaatttttattttgatt 28411132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 280 - 332
Target Start/End: Original strand, 39160460 - 39160512
Alignment:
Q  280 atataggtcatttccggttttccccttgtaaaaatatttttttgatttacccc 332  Q
    |||||||||||||  |||||||||| |||||||   |||||||||||||||||    
T  39160460 atataggtcatttttggttttccccctgtaaaatattttttttgatttacccc 39160512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 254 - 332
Target Start/End: Complemental strand, 10976803 - 10976726
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttccccttgtaaaaatatttttttgatttacccc 332  Q
    |||||||| |||||||| | ||| ||||||||||||||||||||||||||| |||||||   |||||||||||||||||    
T  10976803 ggttaataggtctttaccc-cctgtaatataggtcatttccggttttccccctgtaaaatattttttttgatttacccc 10976726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 254 - 331
Target Start/End: Complemental strand, 39419008 - 39418930
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttcccct-tgtaaaaatatttttttgatttaccc 331  Q
    |||||||| |||||||| | ||| |||||||||||||||||||||||||||| |||||||   ||||||||||||||||    
T  39419008 ggttaataggtctttacccccctgtaatataggtcatttccggttttcccctctgtaaaatattttttttgatttaccc 39418930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 254 - 332
Target Start/End: Original strand, 711238 - 711317
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttccccttgtaaaa-atatttttttgatttacccc 332  Q
    |||||||| |||||||| | ||| |||||||||||||||  |||||||||| ||||||| || |||||||||||||||||    
T  711238 ggttaataggtctttacccccctgtaatataggtcatttatggttttccccctgtaaaatatttttttttgatttacccc 711317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 254 - 332
Target Start/End: Complemental strand, 9227141 - 9227062
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggtttt-ccccttgtaaaaatatttttttgatttacccc 332  Q
    |||||||| |||||||||| ||| |||||||||||||||| |||||| |||| |||||||   |||||||||||||||||    
T  9227141 ggttaataggtctttacacccctgtaatataggtcatttctggttttcccccctgtaaaatattttttttgatttacccc 9227062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 254 - 332
Target Start/End: Original strand, 33658871 - 33658950
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggtttt-ccccttgtaaaaatatttttttgatttacccc 332  Q
    |||||||| |||||||| | ||| ||||||||||||||||||||||| |||| |||||||   |||||||||||||||||    
T  33658871 ggttaataggtctttacccccctgtaatataggtcatttccggttttcccccctgtaaaatattttttttgatttacccc 33658950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 278 - 332
Target Start/End: Complemental strand, 33659138 - 33659084
Alignment:
Q  278 taatataggtcatttccggttttccccttgtaaaaatatttttttgatttacccc 332  Q
    ||||||||||||||||||||||||||| |||||||   |||||||||||||||||    
T  33659138 taatataggtcatttccggttttccccctgtaaaatattttttttgatttacccc 33659084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 312
Target Start/End: Original strand, 39153417 - 39153475
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttccccttgtaaaa 312  Q
    |||||||| |||||||| | ||| ||||||||||||||||||||||||||| |||||||    
T  39153417 ggttaataggtctttacccccctgtaatataggtcatttccggttttccccatgtaaaa 39153475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 278 - 332
Target Start/End: Complemental strand, 36993016 - 36992961
Alignment:
Q  278 taatataggtcatttccggtttt-ccccttgtaaaaatatttttttgatttacccc 332  Q
    ||||||||||||||||||||||| |||| |||||||  ||||||||||||||||||    
T  36993016 taatataggtcatttccggtttttccccctgtaaaataatttttttgatttacccc 36992961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 333
Target Start/End: Complemental strand, 2870940 - 2870863
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttccccttgtaaaaatatttttttgatttacccct 333  Q
    |||||||| |||||||| | ||| |||||||||||||||||| ||| || | | ||||| ||||||||||||||||||||    
T  2870940 ggttaataggtctttac-ctcctgtaatataggtcatttccgatttccctcctataaaa-tatttttttgatttacccct 2870863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 347 - 378
Target Start/End: Original strand, 22642214 - 22642245
Alignment:
Q  347 gttttgatttacccctaataggccaaacaaaa 378  Q
    ||||||||||||||||||||||||||||||||    
T  22642214 gttttgatttacccctaataggccaaacaaaa 22642245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 278 - 332
Target Start/End: Original strand, 31861515 - 31861570
Alignment:
Q  278 taatataggtcatttccgg-ttttccccttgtaaaaatatttttttgatttacccc 332  Q
    ||||||||||||||||||| |||||||||||||||| | || |||||||| |||||    
T  31861515 taatataggtcatttccggtttttccccttgtaaaatttttattttgattcacccc 31861570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 278 - 333
Target Start/End: Complemental strand, 40339569 - 40339515
Alignment:
Q  278 taatataggtcatttccggttttccccttgtaaaaatatttttttgatttacccct 333  Q
    ||||||||||||||||||||||| ||||||||||| | || |||||||| ||||||    
T  40339569 taatataggtcatttccggtttt-cccttgtaaaatttttattttgattcacccct 40339515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 332
Target Start/End: Original strand, 2724508 - 2724561
Alignment:
Q  278 taatataggtcatttccggttttccccttgtaaaaatatttttttgatttacccc 332  Q
    ||||||||||||| |||||||||| || ||| ||||||||||||| |||||||||    
T  2724508 taatataggtcatatccggttttctccctgt-aaaatattttttttatttacccc 2724561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 324
Target Start/End: Complemental strand, 6117933 - 6117887
Alignment:
Q  278 taatataggtcatttccggttttccccttgtaaaaatatttttttga 324  Q
    ||||||||||||||||||||||||||| ||||||  | |||||||||    
T  6117933 taatataggtcatttccggttttccccctgtaaatttttttttttga 6117887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 300
Target Start/End: Original strand, 18229750 - 18229796
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggtttt 300  Q
    |||||||| |||||||||| ||| ||||||||||||||| |||||||    
T  18229750 ggttaataggtctttacacccctgtaatataggtcattttcggtttt 18229796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 332
Target Start/End: Complemental strand, 28277494 - 28277440
Alignment:
Q  278 taatataggtcatttccggttttccccttgtaaaaatatttttttgatttacccc 332  Q
    |||||||||||||||   ||||||||| ||||||| | |||||||||||||||||    
T  28277494 taatataggtcattttttgttttccccctgtaaaattttttttttgatttacccc 28277440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 29754049 - 29754099
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttcccc 304  Q
    ||||||||  ||||||| | ||| |||||||||||||||||||||||||||    
T  29754049 ggttaatagatctttacccccctataatataggtcatttccggttttcccc 29754099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 312
Target Start/End: Complemental strand, 31920378 - 31920344
Alignment:
Q  278 taatataggtcatttccggttttccccttgtaaaa 312  Q
    ||||||||||||||||||||||||||| |||||||    
T  31920378 taatataggtcatttccggttttccccctgtaaaa 31920344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 323
Target Start/End: Complemental strand, 27331221 - 27331177
Alignment:
Q  278 taatataggtcatttccggttttccccttgtaaaaatatttttttg 323  Q
    ||||||||||||||| ||||||||||| ||| ||||||||||||||    
T  27331221 taatataggtcattttcggttttccccctgt-aaaatatttttttg 27331177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 265 - 332
Target Start/End: Complemental strand, 9673175 - 9673107
Alignment:
Q  265 ctttacacacctctaatataggtcatttccggttttcccct-tgtaaaaatatttttttgatttacccc 332  Q
    |||||| | ||| |||||||||||||||  ||||||||||  |||||||  ||||||||||||||||||    
T  9673175 ctttacccccctgtaatataggtcatttttggttttcccccctgtaaaataatttttttgatttacccc 9673107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 278 - 334
Target Start/End: Original strand, 18811151 - 18811207
Alignment:
Q  278 taatataggtcatttccggttttccccttgtaaaaatatttttttgatttacccctg 334  Q
    |||||||||||||||   ||||||||| |||||||   |||||||||||||||||||    
T  18811151 taatataggtcattttttgttttccccctgtaaaatattttttttgatttacccctg 18811207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 347 - 379
Target Start/End: Original strand, 24098528 - 24098560
Alignment:
Q  347 gttttgatttacccctaataggccaaacaaaaa 379  Q
    ||||||||||| |||||||||||||||||||||    
T  24098528 gttttgatttatccctaataggccaaacaaaaa 24098560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 33053103 - 33053051
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttcccctt 306  Q
    |||||||| |||||||| | ||| ||||||||| |||||| ||||||||||||    
T  33053103 ggttaataggtctttacccccctgtaatataggccatttcgggttttcccctt 33053051  T

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Target: scaffold0142 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 2)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 332
Target Start/End: Complemental strand, 34882 - 34805
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttccccttgtaaaaatatttttttgatttacccc 332  Q
    |||||||| |||||||| | ||| ||||||||||||||||| ||||||||| |||||||   |||||||||||||||||    
T  34882 ggttaataggtctttaccc-cctgtaatataggtcatttccagttttccccctgtaaaatactttttttgatttacccc 34805  T

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Target: scaffold0142; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 278 - 332
Target Start/End: Original strand, 34594 - 34648
Alignment:
Q  278 taatataggtcatttccggttttccccttgtaaaaatatttttttgatttacccc 332  Q
    ||||||||||||||||||||||||||| |||||||   ||||||| |||||||||    
T  34594 taatataggtcatttccggttttccccctgtaaaatatttttttttatttacccc 34648  T

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Target: scaffold0450 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 254 - 326
Target Start/End: Complemental strand, 8151 - 8080
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttccccttgtaaaaatatttttttgatt 326  Q
    |||||||| |||||||| ||| | |||||||||||||||| |||||||||||||||||| | || ||||||||    
T  8151 ggttaataggtctttacccac-tgtaatataggtcatttctggttttccccttgtaaaattgttattttgatt 8080  T

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Target: scaffold0031 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 331
Target Start/End: Complemental strand, 2116 - 2038
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttc-cccttgtaaaaatatttttttgatttaccc 331  Q
    |||||||| |||||||| | ||| |||||||||||||||| ||||||| ||| ||||||||| || |||||||| ||||    
T  2116 ggttaataggtctttacccccctgtaatataggtcatttctggttttcacccctgtaaaaattttattttgattcaccc 2038  T

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Target: scaffold0019 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 278 - 332
Target Start/End: Complemental strand, 174636 - 174583
Alignment:
Q  278 taatataggtcatttccggttttccccttgtaaaaatatttttttgatttacccc 332  Q
    |||||||||||||||||| |||||||| ||| ||||||||||||| |||||||||    
T  174636 taatataggtcatttccgattttccccctgt-aaaatattttttttatttacccc 174583  T

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Target: scaffold0289 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 278 - 322
Target Start/End: Original strand, 6750 - 6793
Alignment:
Q  278 taatataggtcatttccggttttccccttgtaaaaatattttttt 322  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||    
T  6750 taatataggtcatttccggttttacccttgt-aaaatattttttt 6793  T

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Target: scaffold0010 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 332
Target Start/End: Original strand, 26309 - 26387
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggtttt-ccccttgtaaaaatatttttttgatttacccc 332  Q
    |||||||| |||||||| | ||| ||||||||||||||| ||||||| |||||| |||||   |||||||||||||||||    
T  26309 ggttaataggtctttaccc-cctgtaatataggtcattttcggttttcccccttataaaatattttttttgatttacccc 26387  T

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Target: scaffold0009 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 332
Target Start/End: Original strand, 149998 - 150065
Alignment:
Q  265 ctttacacacctctaatataggtcatttccggttttccccttgtaaaaatatttttttgatttacccc 332  Q
    |||||| | ||| |||||||||||||||  |||||||||| |||||||   |||||||||||||||||    
T  149998 ctttacccccctgtaatataggtcatttttggttttccccctgtaaaatattttttttgatttacccc 150065  T

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Target: scaffold0009; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 265 - 332
Target Start/End: Complemental strand, 150271 - 150203
Alignment:
Q  265 ctttacacacctctaatataggtcatttccggtttt-ccccttgtaaaaatatttttttgatttacccc 332  Q
    |||||||| ||| |||||||||||||||  |||||| |||| ||||||  | |||||||||||||||||    
T  150271 ctttacacccctgtaatataggtcatttttggttttcccccctgtaaatttttttttttgatttacccc 150203  T

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Target: scaffold0740 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0740
Description:

Target: scaffold0740; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 332
Target Start/End: Original strand, 3671 - 3725
Alignment:
Q  278 taatataggtcatttccggttttccccttgtaaaaatatttttttgatttacccc 332  Q
    ||||||||||||||||| ||||| ||| ||||||||| || |||||||| |||||    
T  3671 taatataggtcatttccagtttttcccctgtaaaaattttattttgattcacccc 3725  T

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Target: scaffold0068 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 278 - 310
Target Start/End: Original strand, 38636 - 38668
Alignment:
Q  278 taatataggtcatttccggttttccccttgtaa 310  Q
    ||||||||||||||||||||||||||| |||||    
T  38636 taatataggtcatttccggttttccccatgtaa 38668  T

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Target: scaffold0032 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 254 - 326
Target Start/End: Original strand, 91051 - 91122
Alignment:
Q  254 ggttaatacgtctttacacacctctaatataggtcatttccggttttccccttgtaaaaatatttttttgatt 326  Q
    |||||||| |||||||| | ||| ||||||||||||||||  ||||||||| ||||||  | |||||||||||    
T  91051 ggttaataggtctttaccc-cctgtaatataggtcatttctagttttccccctgtaaatttttttttttgatt 91122  T

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Target: scaffold0002 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 278 - 322
Target Start/End: Original strand, 332089 - 332132
Alignment:
Q  278 taatataggtcatttccggttttccccttgtaaaaatattttttt 322  Q
    ||||||||||||||| ||||||||||| ||| |||||||||||||    
T  332089 taatataggtcattttcggttttccccctgt-aaaatattttttt 332132  T

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