View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19134_low_1 (Length: 464)
Name: NF19134_low_1
Description: NF19134
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19134_low_1 |
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Alignment Details
Target: chr5 (Bit Score: 422; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 422; E-Value: 0
Query Start/End: Original strand, 1 - 446
Target Start/End: Original strand, 19300687 - 19301132
Alignment:
| Q |
1 |
aaccattttttgttttcttgctagaattttccaaaactactttcttgaattcagcactgtttctgtttcttcctctgcttattatcttcttgcttgattc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
19300687 |
aaccattttttgttttcttgctagaattttccaaaactactttcttgaattcagcactgtttctgtttcttcctctgcttattatcttcttgcttgattc |
19300786 |
T |
|
| Q |
101 |
aaaatcatgattctggaaactagaaaagtatccaacttttgaagacttagcatcatttctgaaaaaaccatcacttgaatcgtctgattctactttttta |
200 |
Q |
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||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |
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| T |
19300787 |
aaaatcatgatcctggaaactagaaaagtatccaacttttgaagacttagcatcattcctgaaaaaaccatcacttgaatcatctgattctactttttta |
19300886 |
T |
|
| Q |
201 |
ggaccataagtgaagtatccagaatccgaattatcagaaacataaccaatttcgaccgatttcatcttcccgtctttgttcagcttcttctcagcaagct |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
19300887 |
ggaccataagtgaagtatccagaatccgaattatcagaaacataaccaatttcgaccgatttcatcttcccgtctttgttcagcttcttctcagcaagct |
19300986 |
T |
|
| Q |
301 |
caaaaccattgtttttagcaccaacaatgttcttaccacggttcataacagcaaacttggtatcaacagaaggtgatttttcttcaacaacaactgaatt |
400 |
Q |
| |
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||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
19300987 |
caaaaccattgtttttagcgccaacaatgttcttaccacggttcataacagcaaacttggtatcaacagaaggtgatttttcttcaacaacaactgaatt |
19301086 |
T |
|
| Q |
401 |
gttatcagaagactctgtcaccaaaggaaatcgacccttataagta |
446 |
Q |
| |
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|||||||||||| ||||||||||||||||| ||||||||||||||| |
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|
| T |
19301087 |
gttatcagaagattctgtcaccaaaggaaaacgacccttataagta |
19301132 |
T |
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