View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19136_low_9 (Length: 249)
Name: NF19136_low_9
Description: NF19136
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19136_low_9 |
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Alignment Details
Target: chr2 (Bit Score: 182; Significance: 2e-98; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 4 - 239
Target Start/End: Complemental strand, 422951 - 422716
Alignment:
| Q |
4 |
gctaaggtacatacaagtgtgtcttctataacttttgaagtctaaagtttgatttagaatgctctgtatctctttctctccaagtgtgtagattgttaat |
103 |
Q |
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| T |
422951 |
gctaaggtacatacaagtgtgtcttctataacttttgaagtctaaagttttatttagaatgctttgtatctctttctctccaagtgtgtagattgttaat |
422852 |
T |
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| Q |
104 |
aggatgcatatatttgcaatacatttgtctttttagacggtatatagattttgagagcatttgttggtgtcaagnnnnnnnnnnggtcgctaagaggatt |
203 |
Q |
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| T |
422851 |
aggatgcatatatttgtaatacattggtctttttagacggtatatagattttgagagcatttgttggtgtcaagttttttttttggtcgctaagaggatt |
422752 |
T |
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| Q |
204 |
tacttacaacctttgatggatgatactgtatctgtg |
239 |
Q |
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| T |
422751 |
tacatacaacctttgatggatgatactctatctgtg |
422716 |
T |
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