View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19139_high_18 (Length: 277)
Name: NF19139_high_18
Description: NF19139
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19139_high_18 |
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Alignment Details
Target: chr7 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 21 - 260
Target Start/End: Complemental strand, 27751870 - 27751631
Alignment:
| Q |
21 |
agggccatgaaggattcacaaaataaacaataccaagaagaacaagccttgatgaatccaccaaaaaagggaagaaacaaatgtgtaacttgcgtatgca |
120 |
Q |
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| T |
27751870 |
agggccatgaaggattcacaaaataaacaataccaagaagaacaagccttgatgaatccaccaaaaaagggaagaaacaaatgtgtaacttgcatatgca |
27751771 |
T |
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| Q |
121 |
tagtgttgctactattactaattttagtaatagtttgtgttattcttgccttcacccttttcaagccaaaagacccaaaaacaaaggttgtttcagctac |
220 |
Q |
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| T |
27751770 |
tagtgttattactattactagttttagtaatagtttgtgttattcttgccttcacccttttcaagccaaaagacccaaaaacaaaggttgtttcagctac |
27751671 |
T |
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| Q |
221 |
tttagaaggtatatcacctcgtctaacatttcctgctatt |
260 |
Q |
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| T |
27751670 |
tttagaaggtatatcacctcgtctaacatttcctgctatt |
27751631 |
T |
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