View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19139_high_25 (Length: 240)
Name: NF19139_high_25
Description: NF19139
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19139_high_25 |
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Alignment Details
Target: chr3 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 36 - 224
Target Start/End: Original strand, 19599342 - 19599530
Alignment:
| Q |
36 |
cgacacttacataagaaggaagggcgactaaattagatcttattttaaaagtctcgaagactctcttaatttcaagtaataacttagactttctttatnn |
135 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
19599342 |
cgacacttacataagaaggaagggcgactaaattagatcttattttaaaagtctcgaagactctcttaatttcaagtaataacttagactttctttataa |
19599441 |
T |
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| Q |
136 |
nnnnnnnnnnnngaagaagcactaacttcgacctttatttgttatattccataggagatatttatcaaataacatcactttatattcat |
224 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
19599442 |
aaaaagaaaaaagaagaagcactaacttcgacctttatttgttatattccataggagatatttatcaaataacatcactttatattcat |
19599530 |
T |
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