View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1913_high_12 (Length: 451)
Name: NF1913_high_12
Description: NF1913
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1913_high_12 |
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Alignment Details
Target: chr7 (Bit Score: 387; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 387; E-Value: 0
Query Start/End: Original strand, 1 - 433
Target Start/End: Original strand, 41417553 - 41417987
Alignment:
| Q |
1 |
catacaacgaagcagagccgaaattataacattgattgagtggtggacctgctgactaagaacctgctaggccaagcatgtacaaaataattaaaccatt |
100 |
Q |
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| T |
41417553 |
catacaacgaagcagaggcgaaattataacattgattgagtggtggacctgctgactaagaacctgctaggccaagcatgtacaaaataatttaaccatt |
41417652 |
T |
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| Q |
101 |
ccaccatcacttcactaaccaacgtacaaccaaagatcaacggccaccatttttcaacagaaaagaaacaacccaccctcaataattaaaaaaggacaca |
200 |
Q |
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| T |
41417653 |
ccaacatcacttcactaaccaacgtacaaccaaagatcaacgggcaccatttttcaacagaaaagaaacaatccaccctcaataattaaaaaaggacaca |
41417752 |
T |
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| Q |
201 |
agcaaggaaatta-cattcacataaaa-agaaagaaagaaatcatcgaggaattcaataatacacaatttcaaatttcatttcccatctagtagtcagta |
298 |
Q |
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| T |
41417753 |
agaaaggaaattaacattcacataaaataaaaagaaagaaatcatcgaggaattcaataatacagaatttcaaatttcatttcccatctagtagtcagta |
41417852 |
T |
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| Q |
299 |
gttgggagctgctcgtgggtgctgttgatgaagagaacctcatagacaagtccagcaattccaccaccgataagtgggccagcccagtagacccagtggt |
398 |
Q |
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| T |
41417853 |
gttgggagctgctcgtgggtgctgttgatgaagagaacctcatagacaagtccagcaattccaccaccgataagtgggccagcccagtagacccagtggt |
41417952 |
T |
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| Q |
399 |
tggaccagctccagctcacaacagcaggcccgaat |
433 |
Q |
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| T |
41417953 |
tggaccagctccagctcacaacagcaggcccgaat |
41417987 |
T |
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