View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1913_high_47 (Length: 281)
Name: NF1913_high_47
Description: NF1913
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1913_high_47 |
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Alignment Details
Target: chr4 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 253
Target Start/End: Original strand, 25378026 - 25378278
Alignment:
| Q |
1 |
ttttcaccgcttctctgtcctggttttcgatttttctgtgtttttaactattgcggacgctaaatgccggtggaacactaataaggtctttttcaaacat |
100 |
Q |
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| T |
25378026 |
ttttcaccgcttctctgtcctggttttcgatttttctgtgtttttaactattgcggacgctaaatgccgttggaacactaataaggtctttttcaaacat |
25378125 |
T |
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| Q |
101 |
attatatttctgacttttgtacttttgtttatcatgtttacttaatggttgtttgatctaccctttccaatttattgcttatggtatggcgaggtgctta |
200 |
Q |
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|||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||| |
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| T |
25378126 |
attatattgctgacttttgtacttttgtttatcatgtttacttaatgattgtttgatctaccctttccaatttattgcttacggtatggcaaggtgctta |
25378225 |
T |
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| Q |
201 |
tcttctacttacattatcattcttaattaatttaatttctcaggccaacctgc |
253 |
Q |
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|||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25378226 |
tcttctgcttacattatcattcttaattaatttaatttctcaggccaacctgc |
25378278 |
T |
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