View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1913_high_60 (Length: 251)
Name: NF1913_high_60
Description: NF1913
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1913_high_60 |
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Alignment Details
Target: chr4 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 26795282 - 26795058
Alignment:
| Q |
1 |
cattgacatgtgttcaggtgcactctatggacgaaacggtcaatgaaacagcctatcaaacaagtgtagaaattggaggacatgtatttagtggtattct |
100 |
Q |
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| T |
26795282 |
cattgacatgtgttcaggtgcgctctatggacgaaacggtcaatgaaacggcctatcaaacaagtgtagaaattggaggacatgtatttagtggcattct |
26795183 |
T |
|
| Q |
101 |
ttatgatcaaggccctgatgaacaaagcttcaataatatacaccctcttgatcagcaacaaaatctcaatctttttagtagtaatgcaatccacaccggt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
26795182 |
ttatgatcaaggccctgatgaacaaagcttcaataatatacaccctcttgatcagcaacaaaatctcaatctttttagtagtaatgtaatccacaccggt |
26795083 |
T |
|
| Q |
201 |
gatgatggtgcaagtgcaagtgcaa |
225 |
Q |
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||||||||||||||||||||||||| |
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| T |
26795082 |
gatgatggtgcaagtgcaagtgcaa |
26795058 |
T |
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