View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1913_high_65 (Length: 248)
Name: NF1913_high_65
Description: NF1913
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1913_high_65 |
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Alignment Details
Target: chr2 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 36025163 - 36025393
Alignment:
| Q |
1 |
gagattgctgagattgacacacatggttcatatgcatgccgttggttaatgctaccaagtcgtgactaaggaaaatgagacaagcctacacacatgtcat |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36025163 |
gagattgctgagattgacacacatggttcatatgcatgccgttggttaatcataccaagtcgtgactaaggaaaatgagacaagcctacacacatgtcat |
36025262 |
T |
|
| Q |
101 |
aaaagggtgatttcccagcacgtttttcacacaatgaaacaattgtgtcttcagctgttcctaaatcaccacatggatagtaacaaatccaccaccaata |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
36025263 |
aaaagggtgatttcccagcacgtttttcacacaatgaaacaattgtgtcttcagctgttcctaaagcaccacatggatagtaacaaatccaccaccaata |
36025362 |
T |
|
| Q |
201 |
ttttgacagaaggttttcctagcctagaatt |
231 |
Q |
| |
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||||||||||||||||||||||||||||||| |
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| T |
36025363 |
ttttgacagaaggttttcctagcctagaatt |
36025393 |
T |
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